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  • Sorting tab delimited text file based on multiple columns in natural way [duplicate]

    - by Vignesh
    This question already has an answer here: Sorting a column of CSV file resulting in 1123 appearing before 232 1 answer I am trying to sort a file based on all two columns Eg: chr19 1070019 1070020 chr16 869712 869713 chr1 1378131 1378132 chr12 189386 189387 chr4 254941 254942 chr16 1476500 1476501 chr2 1476810 1476811 chr19 313283 313284 chr17 595817 595818 chr18 656897 656898 chr19 1061829 1061830 I Tried sort -t $\t -k1,1 2,2 <filename> but doesn't work. I want the output to be sorted by first column and second column based on first column. I want to do a natural sort. Not lexical sorting. Eg: chr1 1378131 1378132 chr2 1476810 1476811 chr4 254941 254942 chr12 189386 189387 chr16 869712 869713 chr16 1476500 1476501 chr17 595817 595818 chr18 656897 656898 chr19 313283 313284 chr19 1061829 1061830 chr19 1070019 1070020 Anyone any idea?

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  • zip -j command, what does the -j option mean?

    - by Simon Guo
    Wondering what is the -j option mean in the zip command. I found the explanation as following: -j Store just the name of a saved file (junk the path), and do not store directory names. By default, zip will store the full path (relative to the current path). But not quite sure what it is exact mean? Can anyone explain it using the following command as an example? C:\programs\zip -j myzipfile file1 file2 file3 Thank you.

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  • Shell - How to find directory of some command?

    - by Gabriel L. Oliveira
    I know that when you are on shell, the only commands that can be used are the ones that can be found on some directory set on PATH. Even I don't know how to see what dirs are on my PATH variable (and this is another good question that could be answered), what I'd like to know is: I come to shell and write: $ lshw I want to know a command on shell that can tell me WHERE this command is located. In other words, where this "executable file" is located? Something like: $ location lshw /usr/bin Anyone?

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  • What's the best way to run a process remotely with capturing the output ?

    - by Homam
    Hi all, I have a windows service responsible for running processes on a remote machine with capturing the output, I googled for that and read a lot of articles and threads, I found two ways: 1) using WMI for call the remote process like this example: http://www.codeproject.com/KB/cs/EverythingInWmi02.aspx 2) using the PsExec tool by System.Diagnostic.Process class ever way of these has many problems, the WMI doesn't support returning the output and doesn't support "WaitingToExit" It just call the process and return the PId, and the PsExec couldn't capture the output programmatically by System.Diagnostic.Process in a clear way, I found only workarounds like redirect the output to a file then read the redirected file..etc, I need a real solution please

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  • boolean type for while loop in bash?

    - by user151841
    I have a cron script on a shared web host that occasionally gets killed. I'd like to make a loop in bash that tries again if it gets killed, because most of the time it will make it. I'm having trouble with the syntax for storing a boolean value :P #!/bin/bash VAR=0; while [ $VAR ]; do if nice -19 mysqldump -uuser -ppassword -h database.hostname.com --skip-opt --all --complete-insert --add-drop-table database_name > ~/file/system/path/filename.sql; then VAR=1; fi done So the script recovers from a killed process okay, but once it's run properly, the new VAR value doesn't kill the while loop. What am I doing wrong?

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  • Passing arguments stored in a file when running projects in Netbeans

    - by oderebek
    My problem is that I can't remember how I can pass the arguments when running a project in netbeans. There is not enough documentation on web if anybody could help it would be highly appreciated. Here is what I know, you can change the run configurations under run Set Project Configuration Default Configuration there there is a entry space where zou can enter the arguments to be passed. I have a file called "AsciiShop.java" which to be runned and I need to pass the arguments stored in a file called "asciishop-A04-PP.i1". When I am using terminal or cmd.exe I can run the program with java AsciiShop < asciishop-A04-PP.i1 and it works perfect. I want to be able to the same on netbeans. I have placed the file in the default working directory which contains src and bin folders. What should I write in the arguments entry field on the project configurations window, so that it works same like java AsciiShop < asciishop-A04-PP.i1

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  • Find the "name" of a library (-L -l switches)

    - by sebastiangeiger
    Being fairly new to C++ I have a question bascially concerning the g++ compiler and especially the inclusion of libraries. Consider the following makefile: CPPFLAGS= -I libraries/boost_1_43_0-bin/include/ -I libraries/jpeg-8b-bin/include/ LDLIBS= libraries/jpeg-8b-bin/lib/libjpeg.a # LDLIBS= -L libraries/jpeg-8b-bin/lib -llibjpeg all: main main: main.o c++ -o main main.o $(LDLIBS) main.o: main.cpp c++ $(CPPFLAGS) -c main.cpp clean: rm -rf *.o main As you can see I declared the LDLIBS variable twice. My code is compiling and working if I use the makefile above. But if I deactivate the first LDLIBS entry and active the second one I get ld: library not found for -llibjpeg. I assume my libjpeg.a is just not called libjpeg but bears some different name. Is there a way to find out the name of a given "libraryfile" libsomething.a or libsomething.dyn?

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  • Documenting software architectures that serve multiple markets

    - by wsb3383
    Hello, I'm the lead developer/architect wanna-be on a J2EE based system/platform at work that serves both real estate and automotive markets. The systems consists of a set of database back ends, web services and two web clients. The platform ends up serving 3 different products: an internal vehicle inventory system for use by company analysts, an external dealer management system (commercialized product), and a real estate inventory system (commercialized). In other words, it follows a software product lines approach....My question is, I'm having trouble communicating to other technical and some business people how this platform architecture is one system that serves multiple markets (by leveraging some existing assets combined with minor modifications)....Is there a formal modeling language that can simplify communicating this intent? I should note that I haven't read much about software product lines, so I'm not sure if there is actually a standard modeling approach to SPL that i'm not aware of....I'm also interested in knowing if there are special configuration management practices for such systems. thanks,

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  • recursively add file extension to all files

    - by seengee
    I have a few directories and sub-directories containing files with no file extension. I want to add .jpg to all the files contained within these directories. I have seen bash scripts for changing the file extension but not for just adding one. It also needs to be recursive, can someone help please?

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  • ps: Clean way to only get parent processes?

    - by shkschneider
    I use ps ef and ps rf a lot. Here is a sample output for ps rf: PID TTY STAT TIME COMMAND 3476 pts/0 S 0:00 su ... 3477 pts/0 S 0:02 \_ bash 8062 pts/0 T 1:16 \_ emacs -nw ... 15733 pts/0 R+ 0:00 \_ ps xf 15237 ? S 0:00 uwsgi ... 15293 ? S 0:00 \_ uwsgi ... 15294 ? S 0:00 \_ uwsgi ... And today I needed to retrieve only the master process of uwsgi in a script (so I want only 15237 but not 15293 nor 15294). As of today, I tried some ps rf | grep -v ' \\_ '... but I would like a cleaner way. I also came accross another solution from unix.com's forums: ps xf | sed '1d' | while read pid tty stat time command ; do [ -n "$(echo $command | egrep '^uwsgi')" ] && echo $pid ; done But still a lot of pipes and ugly tricks. Is there really no ps option or cleaner tricks (maybe using awk) to accomplish that?

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  • How to make System command calls in Java/Groovy?

    - by Zombies
    What I want to do is invoke maven from a groovy script. The groovy script in question is used as a maven wrapper to build J2EE projects by downloading a tag and invoking maven on what was downloaded. How should I accomplish invoking maven to build/package the EAR (the groovy script is already capable of downloading the tag from SCM).

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  • parsing the output of the 'w' command?

    - by Blackbinary
    I'm writing a program which requires knowledge of the current load on the system, and the activity of any users (it's a load balancer). This is a university assignment, and I am required to use the w command. I'm having a hard time parsing this command because it is very verbose. Any suggestions on what I can do would be appreciated. This is a small part of the program, and I am free to use whatever method i like. The most condensed version of w which still has the information I require is `w -u -s -f' which produces this: 10:13:43 up 9:57, 2 users, load average: 0.00, 0.00, 0.00 USER TTY IDLE WHAT fsm tty7 22:44m x-session-manager fsm pts/0 0.00s w -u -s -f So out of that, I am interested in the first number after load average and the smallest idle time (so i will need to parse them all). My background process will call w, so the fact that w is the lowest idle time will not matter (all i will see is the tty time). Do you have any ideas? Thanks (I am allowed to use alternative unix commands, like grep, if that helps).

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  • Find directories not containing a specific directory

    - by Morgan ARR Allen
    Been searching around for a bit and cannot find a solution for this one. I guess I'm looking for a leaf-directory by name. In this example I'd like to get a list of directories call 'modules' that do NOT have a subdirectory called module. modules/package1/modules/spackage1 modules/package1/modules/spackage2 modules/package1/modules/spackage3/modules modules/package1/modules/spackage3/modules/spackage1 modules/package2/modules/ The list I desire would contain modules/package1/modules/spackage3/modules/ modules/package2/modules/ All the directories named module that do not have a subdirectory called module I started with trying something this with no luck find . -name modules \! -exec sh -c 'find -name modules' \; -exec works on exit code, okay lets pass the count as exit code find . -name modules -exec sh -c 'exit $(find {} -name modules|grep -n ""|tail -n1|cut -d: -f1)' \; This should take the count of each subdirectory called modules and exit with it. No such love.

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  • How do you do masked password entry on windows using character overwriting?

    - by Erick
    Currently I am using this implementation to hide user input during password entry: void setEcho(bool enable) { HANDLE hStdin = GetStdHandle(STD_INPUT_HANDLE); DWORD mode; GetConsoleMode(hStdin, &mode); if(enable) { mode |= ENABLE_ECHO_INPUT; } else { mode &= ~ENABLE_ECHO_INPUT; } SetConsoleMode(hStdin, mode); } The user needs to be able to have positive feed back that text entry is being made. What techniques are available in a Win32 environment using C++?

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  • Passing a Batch File an Argument Containing a Quote Containing a Space

    - by Synetech inc.
    Hi, On many occasions I have dealt with passing batch files arguments with spaces, quotes, percents, and slashes and all sorts of combinations of them. Usually I managed to figure out how to accomplish what I want, but this time I am stuck. I have tried a couple of hundred combinations now and my head is starting to hurt. I’ve reduced the problem quite nicely. It’s a simple requirement: pass a double-quoted space from one batch file to another. That is, one batch file should pass some string X to another so that the the second one echos " ". I just can’t figure out what X should be. Here is a minimal batch file that demonstrates and attempt that does not work. (This BAT file takes the place of both by calling itself.) ::Goal is to print: ::" " ::That is, to pass a quoted space from a BAT file to a BAT file if not (%1)==() goto recurse %0 "" "" :recurse echo %1 pause It does not work. I’ve tried using "\" \"", """ """, """" """", "\"" "\"", ""\" \""", "^" ^"", ^"" "^", and so on. Either they print double double-quotes, lose everything after the space, or something else (that is wrong). Any ideas? Thanks.

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  • c program tringle

    - by Johnathon
    C program that accepts three integer values from the user representing the three sides of a triangle. echo whether the 3 numbers makes a equilateral, scalene or isosceles triangle.

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  • percentage of memory used used by a process

    - by benjamin button
    percentage of memory used used by a process. normally prstat -J will give the memory of process image and RSS(resident set size) etc. how do i knowlist of processes with percentage of memory is used by a each process. i am working on solaris unix. addintionally ,what are the regular commands that you use for monitoring processes,performences of processes that might be very useful to all!

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  • How to get an instance of instance System.Diagnostics.Process by processID on a remote machine

    - by Tomas1
    Hi all, I want to run & control a process remotely, I found the best way is the WMI APIs, The WMI gives me information about the remote process but I need more control like waiting it and getting the standard output and errors, how can I do that, and can I get an instance of System.Diagnostics.Process class by instance ID remotely? note: I tried to get an instance of the Process by Process.GetProcessByPID and passign machineName parameter, but and Exception has thrown. Thanks in advance.

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  • MonoDevelop in Linux -- Terminal Commands

    - by Sandeep Bansal
    Hi everyone, I want to make a C# app in Mono as it's the only programming language I'm mostly comfortable with. Anyway, ATI Drivers on Linux do not have a Fan control feature and therefore the cards to tend to heat up. For me I prefer to have a cooler card. What I want to do is run a command such as: aticonfig --pplib-cmd 'set fanspeed 0 70' In a application but I the thing is..How can I run that code so it works, I am currently running Ubuntu 10.04, and it does work in the terminal, but I want to implement it into an application. Thanks

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  • String replacment in batch file

    - by Faisal
    We can replace strings in a batch file using the following command set str="jump over the chair" set str=%str:chair=table% These lines work fine and change the string "jump over the chair" to "jump over the table". Now I want to replace the word "chair" in the string with some variable and I don't know how to do it. set word=table set str="jump over the chair" ?? Any ideas?

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