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  • How to columnate text with tabs (in vim or on the shell)

    - by kine
    I have a frequent need to manually manipulate tab-delimited text for data entry and other purposes, and when i do this it helps if the text is aligned properly into columns. For example (assuming 4-space tabs): # original format abcdefghijklmnop field2 abcdefgh field2 abcdefghijkl field2 # ideal format abcdefghijklmnop field2 abcdefgh field2 abcdefghijkl field2 I am very familiar with using the column utility to columnate text this way, but the problem is that it uses spaces to align the columns, and i specifically need tabs. This requirement also appears to rule out the Tabularize plug-in. Is there any way that i can columnate text with tabs specifically, either within vim or at the shell? It looks like i might be able to do it with groff/tbl, but honestly i'd rather columnate it by hand than mess with that....

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  • Run shell command with variable in filename via Python

    - by rajitha
    I have files with naming convention st009_out.abc1.dat st009_out.abc2.dat st009_out.abc3.dat .................. .................. I am writing Python code where I want to use data from the file to perform a math function and need to extract the second column from the file. I have tried it this way: for k in range(1,10): file1=open('st009_out.abc'+str(k)+'.dat','r') ........... os.system("awk '{print $2}' st009_out.abc${k}.pmf > raj.dat") but this is not working as it is not taking the value of k in the shell command. How do I progress?

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  • Setting http_proxy for Chromium in shell

    - by iceboal
    In order to set proxy in Chromium browser, one needs to go to Settings ? Under the Hood ? Change Proxy Settings ? Network Proxy. It's too complicated. How do I set http_proxy in shell? I've tried export http_proxy=http://127.0.0.1:8080/ But it doesn't seem to work. Also, if you only want to set the proxy on the Chromium browser -- not your entire network -- the command line is the only way to set the proxy just for the browser. How can one set the proxy on Chromium -- using the command line -- to solve this problem?

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  • Would shell command join cause out of memory?

    - by Hancy
    I have two file to join. FILE 1: a A1 a A2 a A3 ... c C1 c C2 ... FILE 2: a feature1_of_a a feature2_of_a ... a featureN_of_a ... ... c feature1_of_c c feature2_of_c ... after join, i could get File like this: A1 feature1_of_a A2 feature1_of_a A3 feature1_of_a A1 feature2_of_a A2 feature2_of_a A3 feature2_of_a ... A1 featureN_of_a A2 featureN_of_a A3 featureN_of_a ... In order to do that: i wrote shell command join -11 -21 -o1.2,2.2 file1 file2. But the problem is: number N might be huge. So if join read all feautre of a into memory at once, memory might not be enough. I don't know how join is implemented. WQould the momery become a problem? If so, is there any way to get what I want?

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  • Shell script to read value from a file and compare it to another one

    - by maneeshshetty
    I have a C program which puts one unique value inside a test file (it would be a two digit number). Now I want to run a shell script to read that number and then compare with my required number (e.g. 40). The comparison should deliver "equal to" or "greater". For example: The output of the C program is written into the file called c.txt with the value 36, and I want to compare it with the number 40. So I want that comparison to be "equal to" or "greater" and then echo the value "equal" or "greater".

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  • Are "backwards" terminators for if and case unique to shell scripting?

    - by tomjakubowski
    In bash at least, if and case blocks are closed like this: if some-expr then echo "hello world" fi case $some-var in [1-5]) do-a-thing ;; *) do-another-thing esac as opposed to the more typical close of end or endif/endcase. As far as I know, this rather funny convention is unique to shell scripting and I have never seen such an odd block terminator anywhere else. Sometimes things like this have an origin in another language (like Ruby's elsif coming from Perl), or a strange justification. Does this feature of shell scripting have a story behind it? Is it found in other languages?

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  • Year Month day from file name in shell script

    - by user3319390
    I hava file names like below adn_DF9D_20140515_0001.log adn_DF9D_20140515_0002.log adn_DF9D_20140515_0003.log adn_DF9D_20140515_0004.log adn_DF9D_20140515_0005.log adn_DF9D_20140515_0006.log adn_DF9D_20140515_0007.log i want get the year, Month, day from file name and create directories Ex: [[ ! -d "$BASE_DIR/$year/$month/$day" ]] && mkdir -p "$BASE_DIR/$year/$month/$day"; How to achieve this and share the ideas/ script appreciate to you

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  • Same script, different behavior [migrated]

    - by Antoine_935
    I just stumbled upon an interesting bug... Still trying to figure out what is exactly happening. Maybe you can help. First, the context. I'm currently building yet another man to html converter (for some reasons I won't motivate here, but I need it). So, have a look at the screenshot below (see the link), more precisely at the outlined spots. See? On the upper shell, I have &lt ; and &gt ;, that is, escaped html. While on the shell below I have < and directly. But as you can see (or do I seriously need looking glass ?), the command man 2 semget | webmanneris the same on both sides, as is the which webmanner. The two are executed roughly at the same moment, with no modification made to the script between. [Oops, cannot post pictures just yet... Here comes the link] http://aspyct.org/media/webmanner-bug.png But the shell below is older (open about 1 hour ago). Newer shells all print out &lt ;. So my first guess was that it somehow had a cached reference to the old inode of the file, or old blocks or whatever. So I modified parts of the script, at the start and then at the end, to print different messages. And, surprise, the message shown up on both terminals. But still, same difference between &lt ; and <. I'm confused... How to explain that behavior? I'm working on a OSX 10.8 (Mountain Lion) EDIT: OK, there is one big difference: the shell below uses ruby 1.9.3, while above is 1.8.7. Is there any known difference in string handling between the two versions ?

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  • typeset: not found error when executing shell script. Am I missing a package or something?

    - by user11045
    Hi, below is the error and corresponding script lines: spec@Lucifer:~/Documents/seagull.svn.LINUX$ ./build.ksh ./build.ksh: 36: typeset: not found ./build.ksh: 39: typeset: not found ./build.ksh: 44: function: not found Command line syntax of - options -exec : mode used for compilation (default RELEASE) -target : target used for compilation (default all) -help : display the command line syntax ./build.ksh: 52: function: not found ERROR: spec@Lucifer:~/Documents/seagull.svn.LINUX$ Script Init of variables BUILD_TARGET=${BUILD_DEFAULT_TARGET} BUILD_EXEC=${BUILD_DEFAULT_EXEC} typeset -u BUILD_OS=uname -s | tr '-' '_' | tr '.' '_' | tr '/' '_' BUILD_CODE_DIRECTORY=code BUILD_DIRECTORY=pwd typeset -u BUILD_ARCH=uname -m | tr '-' '_' | tr '.' '_' | tr '/' '_' BUILD_VERSION_FILE=build.conf BUILD_DIST_MODE=0 BUILD_FORCE_MODE=0

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  • Default shell for running scripts (w/o shebang) in macos?

    - by Igor Spasic
    I have ZSH as default shell in MacOS, everything is working fine. ZSH is installed as brew package, Ive set default shell in my account, new shell is listed in /etc/shells... everything is set, like I've said. I have some shell scripts in which I use some commands from zsh, like print. When I execute the script from command line, the print command is not recognized and the script fails. This script does not have the shebang line. When I put the shebang line for zsh, then everything works; the print command is working. Since I am using only ZSH, is it possible to set default shell for running scripts, so I don't have to put shebang line in my .zsh scripts? Or is it possible to associate .zsh extension to ZSH shell execution?

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  • How to disconnect a running bash job from the shell in Linux?

    - by raven
    I have a script that starts a server on a remote VM. All works great until I close the shell where I executed the script. When the shell closes, so does the server. After some looking around I found the following: & will send the job to the background when executed with the symbol disown -h will disconnect the job from the shell and allow it to run regardless of the shell. The command I used is: ./startServer.sh nasb_wxscat160_catalog-4.1.6 1.0.8 > catalog-log.txt & disown -h When I closed the shell and checked using ps -ef | grep java to see if the job is still working I did see it in the list. However when I tried to connect to the server it was unresponsive. On deeper inspection, the log file was filled just until I closed the shell and using the ps -m flag I say the process jobs were not working. Has any one encountered some thing of this sort?

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  • Startup script on Ubuntu 12.04 not getting executed. Dependencies / load order.

    - by user861181
    I want to create a simple startup script on Ubuntu 12.04: myscript.sh #!/bin/sh sudo /etc/init.d/nginx start cd ~/app/current god -c config/resque.god sudo /etc/init.d/redis-server start echo "SCRIPT RUN" I have it at /etc/init.d/myscript.sh When I do sudo chkconfig --level 2345 myscript.sh I get myscript.sh 2345 When I do sudo chkconfig --add myscript.sh I get insserv: warning: script 'K01myscript.sh' missing LSB tags and overrides insserv: warning: script 'myscript.sh' missing LSB tags and overrides The script you are attempting to invoke has been converted to an Upstart job, but lsb-header is not supported for Upstart jobs. insserv: warning: script 'dbus' missing LSB tags and overrides .... myscript.sh 0:off 1:off 2:on 3:on 4:on 5:on 6:off ** EDIT:: I checked the boot.log and it turns out that the script is run, but the problem is that god is not loaded yet when the script is executed. Apparently I want to load this script as the very last thing at startup (or somehow check if god is loaded and then start the script).

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  • How to avoid duplicates when copying files that have been renamed at the destination

    - by Benoitt
    I have to get pictures from a folder – with subfolders which are updated automatically – with their extensions. These files have to be copied in a folder where a website based on PHP will edit them (by renaming and creating an XML file) to be downloadable and integrated in an XML feed. Because of the rename function of the script, when I perform the copy gain, all the files are duplicated, because the script has renamed the original ones already. I've tried a few things with rsync but I'm looking for something more powerful because I can't copy files with an external "history". #!/bin/bash find '/home/name/picture' -name '*.jpg' | while read FILE ; do rsync --backup --backup-dir=incremental --suffix=.old "$FILE" /var/www/media ; done wget --spider 'http://myscript.php' ; #exit 0 PS: As a little addition, I'd like to replace '.' with a 'space' just after the *.jpeg copy. My PHP script has some problem to define files with comma because of the extension. I'm finking about a command with find – like I did before – with a sed function? Is that a good idea?

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  • Mac OS X - run shell script from the desktop GUI

    - by dreftymac
    You can create a shell script or a Python or Ruby script and run it on the Mac by using "Terminal" ... if you have Finder open, and you click on the icon for the file containing the source code of a saved shell script, is there a way to have that script run, instead of opening in my text editor ?

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  • Shell not finding binary when attempting to execute it (it's _definitely_ there)

    - by eegg
    I have a specific set of binaries installed at: ~/.GutenMark/binary/<binaries...> These were previously working correctly, but for seemingly no reason when I attempt to execute them the shell claims not to find them: james@anubis:~/.GutenMark/binary$ ls -al ... -rwxr-xr-x 1 james james 2979036 2009-05-10 13:34 GUItenMark ... -rwxrwxrwx 1 james james 76952 2009-05-10 13:34 GutenMark ... -rwxr-xr-x 1 james james 10156 2009-05-10 13:34 GutenSplit ... james@anubis:~/.GutenMark/binary$ ./GutenMark bash: ./GutenMark: No such file or directory james@anubis:~/.GutenMark/binary$ I've tried to isolate the cause of this, with no success. The same happens with zsh, bash, and sh (all giving their appropriate "file not found" error -- this is definitely not a strange output from the binary itself). The same happens either as user james or as root. Nor is it directory specific; if I move the whole directory installation, or just a single binary, to anywhere else, the same happens when attempting to execute it. The same even happens when I put the directory in $PATH and just execute "GutenMark". It also happens when I execute it from a script (I've tried Python's commands module -- though this appears to just call sh). The problem appears to be specific to the binaries themselves, yet they appear to never actually get executed. Any ideas?

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  • Jenkins shell command isn't executing

    - by Dmitro
    In Jenkins project I add command for executiong rm /var/www/ru.liveyurist.ru/tmp/* But when I build project I get error: Started by user anonymous Building in workspace /var/www/ru.myproject.ru Updating https://subversion.assembla.com/svn/myproject/trunk At revision 1168 no change for https://subversion.assembla.com/svn/liveexpert/trunk since the previous build [ru.myproject.ru] $ /bin/sh -xe /tmp/hudson7189633355149866134.sh FATAL: command execution failed java.io.IOException: Cannot run program "/bin/sh" (in directory "/var/www/ru.myproject.ru"): java.io.IOException: error=12, Cannot allocate memory at java.lang.ProcessBuilder.start(ProcessBuilder.java:475) at hudson.Proc$LocalProc.<init>(Proc.java:244) at hudson.Proc$LocalProc.<init>(Proc.java:216) at hudson.Launcher$LocalLauncher.launch(Launcher.java:709) at hudson.Launcher$ProcStarter.start(Launcher.java:338) at hudson.Launcher$ProcStarter.join(Launcher.java:345) at hudson.tasks.CommandInterpreter.perform(CommandInterpreter.java:82) at hudson.tasks.CommandInterpreter.perform(CommandInterpreter.java:58) at hudson.tasks.BuildStepMonitor$1.perform(BuildStepMonitor.java:19) at hudson.model.AbstractBuild$AbstractRunner.perform(AbstractBuild.java:703) at hudson.model.Build$RunnerImpl.build(Build.java:178) at hudson.model.Build$RunnerImpl.doRun(Build.java:139) at hudson.model.AbstractBuild$AbstractRunner.run(AbstractBuild.java:473) at hudson.model.Run.run(Run.java:1410) at hudson.model.FreeStyleBuild.run(FreeStyleBuild.java:46) at hudson.model.ResourceController.execute(ResourceController.java:88) at hudson.model.Executor.run(Executor.java:238) Caused by: java.io.IOException: java.io.IOException: error=12, Cannot allocate memory at java.lang.UNIXProcess.<init>(UNIXProcess.java:164) at java.lang.ProcessImpl.start(ProcessImpl.java:81) at java.lang.ProcessBuilder.start(ProcessBuilder.java:468) ... 16 more Build step 'Execute shell' marked build as failure Finished: FAILURE I started Jenkins from root user. Please advise what can be reason of this error?

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  • Execute remote shell commands on windows XP embedded

    - by BartD
    The following situation: We have Windows XP Embedded clients that have all admin shares disabled and only have read-only shares (for security reasons). What we want to do is run remote shell (dos) commands on these machines. At first we looked at PsExec & BeyondExec applications (and all sorts of variants), but all of them rely on having at least an admin$ share, which are disabled on our systems. Telnet is not secure enough, as is RSHD servers. So we looked at the next obvious solution: and SSH server. We also prefer an open-source or freeware solution that is still maintained. I looked at freeSSH server for Windows, but that didn't run stable, I tried installing copSSH, WinSSH & openSSH for Windows, but none of these applications seem to work on Windows XP Embedded. The services can either not be installed or cannot be started. I don't know why. Some kind of dependency that is missing. So are there any other solutions out there? I don't care about having to an agent installation locally of some kind on each system, as long as the size of the software is small enough. Can someone suggest some alternatives to what I've already mentioned? Thank you very much.

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  • Shell wrong encoding

    - by csch
    Somehow I managed to screw up my shell-encoding. An example: root§server:ç£ cat --help Usage: cat ¡OPTION¿... ¡FILE¿... Concatenate FILE(s), or standard input, to standard output. -A, --show-all equivalent to -vET -b, --number-nonblank number nonempty output lines -e equivalent to -vE -E, --show-ends display $ at end of each line -n, --number number all output lines -s, --squeeze-blank suppress repeated empty output lines -t equivalent to -vT -T, --show-tabs display TAB characters as ^I -u (ignored) -v, --show-nonprinting use ^ and M- notation, except for LFD and TAB --help display this help and exit --version output version information and exit With no FILE, or when FILE is -, read standard input. Examples: cat f - g Output f's contents, then standard input, then g's contents. cat Copy standard input to standard output. Report cat bugs to bug-coreutils§gnu.org GNU coreutils home page: <http://www.gnu.org/software/coreutils/> General help using GNU software: <http://www.gnu.org/gethelp/> For complete documentation, run: info coreutils 'cat invocation' root§server:ç£ It should look like: root@server:~# cat --help Usage: cat [OPTION]... [FILE]... Concatenate FILE(s), or standard input, to standard output. -A, --show-all equivalent to -vET -b, --number-nonblank number nonempty output lines -e equivalent to -vE -E, --show-ends display $ at end of each line -n, --number number all output lines -s, --squeeze-blank suppress repeated empty output lines -t equivalent to -vT -T, --show-tabs display TAB characters as ^I -u (ignored) -v, --show-nonprinting use ^ and M- notation, except for LFD and TAB --help display this help and exit --version output version information and exit With no FILE, or when FILE is -, read standard input. Examples: cat f - g Output f's contents, then standard input, then g's contents. cat Copy standard input to standard output. Report cat bugs to [email protected] GNU coreutils home page: <http://www.gnu.org/software/coreutils/> General help using GNU software: <http://www.gnu.org/gethelp/> For complete documentation, run: info coreutils 'cat invocation' root@server:~# I have no clue what went wrong, do you have any ideas?

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  • Plesk FTP not working but SFTP and Shell is working

    - by shamittomar
    I am facing a strange problem. The FTP on my Plesk VPS is not working. Whenever I try to connect, FileZilla FTP client says: Status: Resolving address of xxxxxxxxxxxxx.com Status: Connecting to xxx.xxx.xxx.xxx:21... Status: Connection established, waiting for welcome message... Error: Could not connect to server So, it's not even going to the step of asking username/password. So, it's something else. The SFTP on port 22 is working fine. Also, I can successfully do shell access and run commands. But, I NEED FTP access too on port 21. I have searched everywhere but can not find any setting to enable it. This is the Plesk version info: Parallels Plesk Panel version 9.5.2 Operating system Linux 2.6.26.8-57.fc8 CPU GenuineIntel, Intel(R) Pentium(R) 4 CPU 3.00GHz Any help is appreciated. [EDIT]: The firewall is not blocking it. I have checked it on server and there are absolutely no blocking rule. Firewall states: All incoming/outgoing connections are accepted on FTP And on client-side (my PC), I can connect to other FTP servers so this is not an issue in my PC's firewall. Moreover, I can not even connect to the FTP from online FTP clients like net2ftp.

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  • Parallel shell loops

    - by brubelsabs
    Hi, I want to process many files and since I've here a bunch of cores I want to do it in parallel: for i in *.myfiles; do do_something $i `derived_params $i` other_params; done I know of a Makefile solution but my commands needs the arguments out of the shell globbing list. What I found is: > function pwait() { > while [ $(jobs -p | wc -l) -ge $1 ]; do > sleep 1 > done > } > To use it, all one has to do is put & after the jobs and a pwait call, the parameter gives the number of parallel processes: > for i in *; do > do_something $i & > pwait 10 > done But this doesn't work very well, e.g. I tried it with e.g. a for loop converting many files but giving me error and left jobs undone. I can't belive that this isn't done yet since the discussion on zsh mailing list is so old by now. So do you know any better?

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  • Shell script to fix bad filenames? [closed]

    - by Ze'ev
    I'm IT at my small firm; and, despite my dire warnings, everyone puts files on the server with awful names, including leading & trailing spaces, bad characters (including \ ; / + . < > - etc!) They do this by accessing the (FreeBSD/FreeNAS) server via AFP on Macs, so no part of the system complains. Is there a script I can use to go through an entire directory tree and fix bad filenames? Basically replace all spaces & bad ASCII with _ ... and if a file already exists, just slap a _2 or something on the end. I don't suppose there's a way to get the system to enforce good filenaming conventions, is there?

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  • Difference between piping a file to sh and calling a shell file

    - by Peter Coulton
    This is what was trying to do: $ wget -qO- www.example.com/script.sh | sh which quietly downloads the script and prints it to stdout which is then piped to sh. This unfortunately doesn't quite work, failing to wait for user input a various points, aswell as a few syntax errors. This is what actually works: $ wget -qOscript www.example.com/script.sh && chmod +x ./script && ./script But what's the difference? I'm thinking maybe piping the file doesn't execute the file, but rather executes each line individually, but I'm new to this kind of thing so I don't know.

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  • "set -e" in shell and command substitution

    - by ivant
    In shell scripts set -e is often used to make them more robust by stopping the script when some of the commands executed from the script exits with non-zero exit code. It's usually easy to specify that you don't care about some of the commands succeeding by adding || true at the end. The problem appears when you actually care about the return value, but don't want the script to stop on non-zero return code, for example: output=$(possibly-failing-command) if [ 0 == $? -a -n "$output" ]; then ... else ... fi Here we want to both check the exit code (thus we can't use || true inside of command substitution expression) and get the output. However, if the command in command substitution fails, the whole script stops due to set -e. Is there a clean way to prevent the script from stopping here without unsetting -e and setting it back afterwards?

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  • Regarding Shell variable

    - by arav
    I need to call another shell script testarg.sh within my main script. This script testarg.sh has arguments ARG1 ,ARG2, ARG3. I need to call up the below way ./testarg.sh -ARG1 -ARG2 -ARG3 ARG1 and ARG3 argument Variables are mandatory ones. If its not passed to the main script then i quit. ARG2 is an optional one. If the ARG2 variable is not set with value or it's not defined then i need not pass it from main script.So i need to call up the below way ./testarg.sh -ARG1 -ARG3 If the value exist for the ARG2 Varibale then i need to call the below way ./testarg.sh -ARG1 -ARG2 -ARG3 Do i need to have a if else statement for checking the ARG2 variable is empty or null. Is there any other way to do it.

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  • How to bundle shell script and C code?

    - by eSKay
    I have a C shell script that calls two C programs - one after the another with some file handling before, in-between and afterwards. Now, as such I have three different files - one C shell script and 2 .c files. I need to give this script to other users. The problem is that I have to distribute three files - which the users must keep in the same folder and then execute the script. Is there some better way to do this? [I know I can make one C code file out of those two... but I will still be left with a shell script and a C code. Actually, the two C codes do entirely different things... so I want them to be separate]

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