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  • What do you think is the best language for Bioinformatics?

    - by Ben Fossen
    I have done a couple research jobs in Bio-informatics and I have used Matlab for them. Matlab had a lot of powerful tools and was easy to use. I did thinks with genome sequencing and predicting metabolic pathways. I am wondering what other people think is best? or there might not be one specific language but a few that lend themselves best to Bio-informatics work that is math heavy and deals with a large amount of data.

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  • cmake source and out-of-source navigation

    - by idimba
    Hi, cmake advises to use out-of-source builds. While in general I like the idea I find it not comfortable to navigate from out-of-source sub directory to the corresponding source directory. I frequently need the code to perform some actions with code (e.g. grep, svn command etc.). Is there an easy way in shell to navigate from out-of-source sub directory to the corresponding source directory? Thanks Dima

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  • Custom Installer

    - by Jay
    Hi, I am writing a custom installer in C#. Can you tell me an easy way to check if the machine has .NET version installed [even 2.0]. In cases where it is not installed, my app doesn't even start. Thanks

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  • Cast LINQ Function Result to Domain Object

    - by Alex
    Hello, I have a table valued function to perform full text search on SQL server. The result type of my full text search function in LINQ is a special autogenerated type which includes KEY and RANK in addition to my regular domain object properties. So, if my regular domain object is PERSONS (with properties FirstName, LastName etc.), I also have a result object PERSONS_FTSResult with the same properties + KEY and RANK. Is there an easy way to cast it back to PERSONS?

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  • Encrypt column data with LINQ

    - by kape123
    I was wondering if there is easy solution to this or I'm stuck with following: When updating DB: dti.Pass = Crypter.Encrypt(dti.Pass); _db.SubmitChanges(); When selecting from DB: Data.DbTableItem dti = _db.Single(a=a.Id == id); dti.Pass = Crypter.Decrypt(dti.Pass); Meaning - I am not really into writing repetitive code and this seems like logical thing to be supported by LINQ; so I'm wondering if it is.

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  • Eclipse does not format this if statement correctly

    - by Maroloccio
    This should be easy to answer: I have Eclipse set to wrap Java code over 80 chars to respect my margin. This code never wraps: if (expressionItem.type.isTypeCompatibleWith(containingNameLink.type) == false) { reportParsingError("expression type incompatible with containing " + "context."); } Question: how do I set my code formatter preferences so that the margin is respected?

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  • Show Diff of two trees in Eclipse

    - by ericbodden
    In Eclipse, I am using a TreeViewer to show a custom tree, whose contents are drawn from an ITreeContentProvider. Now I am trying to create a second view that allows me to automatically show a two-way comparisons of two such trees. I found various views for textual comparison within Eclipse, but I could not find an easy way to show the structural differences between two arbitrary trees. Any thoughts?

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  • Pass a value to an inFrame

    - by user106707
    This probably an easy thing to do but for some reason I can't get a handle on it. I have a simple form that allows people to select one if three items for sale. When they chose their item I need to pass that variable into an iFrame with a third party checkout page to safely process their cc transaction. How would I do this? Cheers-

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  • Create blog post simply and easily

    - by danit
    I have a script which collects an image, link and some text content from various sources. It loops through and creates a number of posts. I'd like take each post add it to Wordpress with a Title, an image, and a link. Can anyone suggest an easy way of doing this?

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  • Automating rake doc:app

    - by jerhinesmith
    For you rails programmers, what's the easiest way to keep your RDoc files up-to-date? I know I can run rake doc:app manually, but I really don't feel like adding a manual step to the check-in process, and since we're already using cruisecontrolrb to handle deployment and testing automation, it seems like there should be an easy way to regenerate these files on check-in. Is anyone already automating rake doc:app? And, if so, what are your suggestions?

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  • JQuery: can I submit values from inputs that aren't in a form?

    - by Alvaro
    Simple as that: I have some inputs that are rendered inside another form element, but I want to submit then individually. I tried "serializing" the div that contains them, but it didn't work. Is there an easy way to do this? My code: var form = $("#my_div"); var get_data = $(form).serialize(); /* Get #my_div inputs value */ $.get(self.url_form_rendering, get_data, function (data){ /* handle server response */ }) Serialize returns "", any ideas that don't involve redesigning the layout to avoid form nesting?

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  • How to store UISegmentedControle state in NSUserdefaults

    - by Chrizzz
    The problem is when de selectedSegmentIndex is unselected: "UISegmentedControlNoSegment" alias "-1". The other states (0, 1, 2 , etc.), I can store as Integers and retrieve with carTypeSegmentedControl.selectedSegmentIndex = [defaults integerForKey:@"typeOfCar"]; But -1 is no NSInteger. I also tried to remove the Integer out of the NSUserdefaults but a request would return an "0", which is not acceptable. So, is there another easy way? tnx for reading

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  • Using RhinoMocks, how do you mock or stub a concrete class without an empty constructor?

    - by Mark Rogers
    Mocking a concrete class with Rhino Mocks seems to work pretty easy when you have an empty constructor on a class: public class MyClass{ public MyClass() {} } But if I add a constructor that takes parameters and remove the one that doesn't take parameters: public class MyClass{ public MyClass(MyOtherClass instance) {} } I tend to get an exception: System.MissingMethodException : Can't find a constructor with matching arguments I've tried putting in nulls in my call to Mock or Stub, but it doesn't work. Can I create mocks or stubs of concrete classes with Rhino Mocks, or must I always supply (implicitly or explicitly) a parameter-less constructor?

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  • programmatically unset a default application

    - by dystroy
    I made a Home application and I'd like to offer the ability to exit it and unset it as the default application. Exit is easy (just starting an intent) but the problem is I don't want my program to be launched again the next time the user click the Home button. I know that this can be done by going in the parameters / Applications / my app / erase default actions but I would like to do it from my program so that the user doesn't have to search this function. How can it be done ?

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  • Would a Centralized Blogging Service Work?

    - by viatropos
    If there's a better place to ask this, please let me know. Every time I build a new website/blog/shopping-cart/etc., I keep trying to do the following: Extract out common functionality into reusable code (Rubygems and jQuery plugins mostly) If possible, convert that gem into a small service so I never have to deal with a database for the objects involved (by service, I mean something lean and mean, usually built with the Sinatra Web Framework with a few core models. My assumption is, if I can remove dependencies on local databases, that will make it easier and more scalable in the long run (scalable in terms of reusability and manageability, not necessarily database/performance). I'm not sure if that's a good or bad assumption yet. What do you think? I've made this assumption because of the following reason: Most serious database/model functionality has been built on the internet somewhere. Just to name a few: Social Network API: Facebook Messaging API: Twitter Mailing API: Google Event API: Eventbrite Shopping API: Shopify Comment API: Disqus Form API: Wufoo Image API: Picasa Video API: Youtube ... Each of those things are fairly complicated to build from scratch and to make as optimized, simple, and easy to use as those companies have. So if I build an app that shows pictures (picasa) on an Event page (eventbrite), and you can see who joined the event (facebook events), and send them emails (google apps api), and have them fill out monthly surveys (wufoo), and watch a video when they're done (youtube), all integrated into a custom, easy to use website, and I can do that without ever creating a local database, is that a good thing? I ask because there's two things missing from the puzzle that keep forcing me to create that local database: Post API RESTful/Pretty Url API While there's plenty of Blogging systems and APIs for them, there is no one place where you can just write content and have it part of some massive thing. For every app, I have to use code for creating pretty/restful urls, and that saves posts. But it seems like that should be a service! Question is, is that the main point of a website? Will everyone always need "their own blog"? Why not just have a profile and write lots of content on an established platform like StackOverflow or Facebook?

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  • Do Websites need Local Databases Anymore?

    - by viatropos
    If there's a better place to ask this, please let me know. Every time I build a new website/blog/shopping-cart/etc., I keep trying to do the following: Extract out common functionality into reusable code (Rubygems and jQuery plugins mostly) If possible, convert that gem into a small service so I never have to deal with a database for the objects involved (by service, I mean something lean and mean, usually built with the Sinatra Web Framework with a few core models). My assumption is, if I can remove dependencies on local databases, that will make it easier and more scalable in the long run (scalable in terms of reusability and manageability, not necessarily database/performance). I'm not sure if that's a good or bad assumption yet. What do you think? I've made this assumption because of the following reason: Most serious database/model functionality has been built on the internet somewhere. Just to name a few: Social Network API: Facebook Messaging API: Twitter Mailing API: Google Event API: Eventbrite Shopping API: Shopify Comment API: Disqus Form API: Wufoo Image API: Picasa Video API: Youtube ... Each of those things are fairly complicated to build from scratch and to make as optimized, simple, and easy to use as those companies have made them. So if I build an app that shows pictures (picasa) on an Event page (eventbrite), and you can see who joined the event (facebook events), and send them emails (google apps api), and have them fill out monthly surveys (wufoo), and watch a video when they're done (youtube), all integrated into a custom, easy to use website, and I can do that without ever creating a local database, is that a good thing? I ask because there's two things missing from the puzzle that keep forcing me to create that local database: Post API RESTful/Pretty Url API While there's plenty of Blogging systems and APIs for them, there is no one place where you can just write content and have it part of some massive thing. For every app, I have to use code for creating pretty/restful urls, and that saves posts. But it seems like that should be a service! Question is, is that what the website is? ...That place to integrate the worlds services for my specific cause... and, sigh, to store posts that only my site has access to. Will everyone always need "their own blog"? Why not just have a profile and write lots of content on an established platform like StackOverflow or Facebook? ... That way I can write apps entirely without a database and know that I'm doing it right. Note: Of course at some point you'd need a database, if you were doing something unique or new. But for the case where you're just rewiring information or creating things like videos, events, and products, is it really necessary anymore??

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