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• R optimization: How can I avoid a for loop in this situation?

  - by chrisamiller

  I'm trying to do a simple genomic track intersection in R, and running into major performance problems, probably related to my use of for loops. In this situation, I have pre-defined windows at intervals of 100bp and I'm trying to calculate how much of each window is covered by the annotations in mylist. Graphically, it looks something like…

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• Why does reusing arrays increase performance so significantly in c#?

  - by Willem

  In my code, I perform a large number of tasks, each requiring a large array of memory to temporarily store data. I have about 500 tasks. At the beginning of each task, I allocate memory for an array : double[] tempDoubleArray = new double[M]; M is a large number depending on the precise task, typically around 2000000. Now, I do some…

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• Writing a report

  - by wvd

  Hello all, Since some time I've been investigating more time into profiling things better, really think about how to do a thing and why. Now I'm going to start a new project, where I will be writing a report about. The report will be about anything what I wrote in the project, why, and I'll be investigating some things and do particular…

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• Peculiar JRE behaviour running RMI server under load, should I worry?

  - by darri

  I've been developing a minimalistic Java rich client CRUD application framework for the past few years, mostly as a hobby but also actively using it to write applications for my current employer. The framework provides database access to clients either via a local JDBC based connection or a lightweight RMI server. Last night I started a…

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• Overhead of calling tiny functions from a tight inner loop? [C++]

  - by John

  Say you see a loop like this one: for(int i=0; i<thing.getParent().getObjectModel().getElements(SOME_TYPE).count(); ++i) { thing.getData().insert( thing.GetData().Count(), thing.getParent().getObjectModel().getElements(SOME_TYPE)[i].getName() ); } if this was Java I'd probably not think twice. But in…

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• TestDriven.Net 3.0 – All Systems Go

  - by Jamie Cansdale

  I’m pleased to announce that TestDriven.Net 3.0 is now available. Finally! I know many of you will already be using the Beta and RC versions, but if you look at the release notes you’ll see there’s been many refinements since then, so I highly recommend you install the RTM version. Here is a quick summary of a few new features:…

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• Building vs. Buying a Master Data Management Solution

  - by david.butler(at)oracle.com

  Many organizations prefer to build their own MDM solutions. The argument is that they know their data quality issues and their data better than anyone. Plus a focused solution will cost less in the long run then a vendor supplied general purpose product. This is not unreasonable if you think of MDM as a point solution for a…

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• Pimp my Silverlight Firestarter

  - by mbcrump

  So Silverlight Firestarter is over and your sitting on your couch thinking… what now? Well its time to So how exactly can you pimp the Silverlight Firestarter? Well read below and you will find out: 1) Pimp the videos: First we are going to use a program named Juice to download all of the Silverlight Firestarter…

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• Application Performance Episode 2: Announcing the Judges!

  - by Michaela Murray

  The story so far… We’re writing a new book for ASP.NET developers, and we want you to be a part of it! If you work with ASP.NET applications, and have top tips, hard-won lessons, or sage advice for avoiding, finding, and fixing performance problems, we want to hear from you! And if your app uses SQL Server, even better –…

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• Give a session on C++ AMP – here is how

  - by Daniel Moth

  Ever since presenting on C++ AMP at the AMD Fusion conference in June, then the Gamefest conference in August, and the BUILD conference in September, I've had numerous requests about my material from folks that want to re-deliver the same session. The C++ AMP session I put together has evolved over the 3 presentations to…

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• Join our Marketing Intelligence Team in Dublin!

  - by jessica.ebbelaar

  Do you want to work with the brightest minds in the industry? Want to be part of a global team that’s changing the way the world does business? Then Oracle is the place for YOU. Join now as a Marketing Intelligence Representative. You will have the opportunity to develop within the role through working alongside the…

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• WebLogic Server–Use the Execution Context ID in Applications–Lessons From Hansel and Gretel

  - by james.bayer

  I learned a neat trick this week.  Don’t let your breadcrumbs go to waste like Hansel and Gretel did!  Keep track of the code path, logs and errors for each request as they flow through the system.  Earlier this week an OTN forum post in the WLS – General category by Oracle Ace John Stegeman asked a…

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• Give a session on C++ AMP – here is how

  - by Daniel Moth

  Ever since presenting on C++ AMP at the AMD Fusion conference in June, then the Gamefest conference in August, and the BUILD conference in September, I've had numerous requests about my material from folks that want to re-deliver the same session. The C++ AMP session I put together has evolved over the 3…

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• Personal Financial Management – The need for resuscitation

  - by Salil Ravindran

  Until a year or so ago, PFM (Personal Financial Management) was the blue eyed boy of every channel banking head. In an age when bank account portability is still fiction, PFM was expected to incentivise customers to switch banks. It still is, in some emerging economies, but if the state of PFM in matured…

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• Mastering snow and Java development at jDays in Gothenburg

  - by JavaCecilia

  Last weekend, I took the train from Stockholm to Gothenburg to attend and present at the new Java developer conference jDays. It was professionally arranged in the Swedish exhibition hall close to the amusement park Liseberg and we got a great deal out of the top-level presenters and hallway discussions.…

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• What Are All the Variables Necessary to Create Blackbox Logs for Nginx?

  - by Alan Gutierrez

  There's an article out there, Profiling LAMP Applications with Apache's Blackbox Logs, that describes how to create a log that records a lot of detailed information missing in the common and combined log formats. This information is supposed to help you resolve performance issues. As the author notes…

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• Drupal on an NFS share has terrible performance

  - by Marcus

  We have a setup where a Drupal 7 site with the following setup - a VMware ESXi 4.1 host server running a web vm and an NFS VM. The web VM is using Apache and mod_php. The site is still in development thus we have to turn off all forms of caching due to the frequently-updated files. Each page…

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• How Can We Create Blackbox Logs for Nginx?

  - by Alan Gutierrez

  There's an article out there, Profiling LAMP Applications with Apache's Blackbox Logs, that describes how to create a log that records a lot of detailed information missing in the common and combined log formats. This information is supposed to help you resolve performance issues. As the…

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• 2nd Year College - Learning - Microsoft Server Products

  - by Ryan

  As the title says, I just finished my first year of college (majoring in Software Engineering). Fortunately my school likes Microsoft enough, and I can get pretty much anything I want that Microsoft sells. I also can get IBM Websphere and the like for free as well. Earlier this year,…

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• On ESXi, guest machines hang for significant intervals compared to real machines. How can I fix this?

  - by Tarbox

  This is ESXi version 5.0.0. We plan on upgrading to 5.5 eventually. I have four code profiles, two taken on a real, unvirtualized machine, two taken on a virtual machine. Ordering the list of subroutines by time spent in each one, the two real profiles are practically identical. The…

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• Wireless Network suddenly cant connect after Windows update

  - by vinir

  UPDATE: As my patience started to end, the laptop started to display symptoms of other malfunctions, so I ended up returning it to Asus and actually had the price of the laptop back in store credit. I did not solve the problem per se, but as I don't have the notebook and the screen, the…

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• Some New .NET Toys (Repost)

  - by Kevin Grossnicklaus

  Last week I was fortunate enough to spend time in Redmond on Microsoft’s campus for the 2011 Microsoft MVP Summit. It was great to hang out with a number of old friends and get the opportunity to talk tech with the various product teams up at Microsoft. The weather wasn’t exactly sunny…

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• The way I think about Diagnostic tools

  - by Daniel Moth

  Every software has issues, or as we like to call them "bugs". That is not a discussion point, just a mere fact. It follows that an important skill for developers is to be able to diagnose issues in their code. Of course we need to advance our tools and techniques so we can prevent bugs…

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• Using the Static Code Analysis feature of Visual Studio (Premium/Ultimate) to find memory leakage problems

  - by terje

  Memory for managed code is handled by the garbage collector, but if you use any kind of unmanaged code, like native resources of any kind, open files, streams and window handles, your application may leak memory if these are not properly handled.  To handle such resources the…

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• Analysing and measuring the performance of a .NET application (survey results)

  - by Laila

  Back in December last year, I asked myself: could it be that .NET developers think that you need three days and a PhD to do performance profiling on their code? What if developers are shunning profilers because they perceive them as too complex to use? If so, then what method do…

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