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  • pyplot: really slow creating heatmaps

    - by cvondrick
    I have a loop that executes the body about 200 times. In each loop iteration, it does a sophisticated calculation, and then as debugging, I wish to produce a heatmap of a NxM matrix. But, generating this heatmap is unbearably slow and significantly slow downs an already slow algorithm. My code is along the lines: import numpy import matplotlib.pyplot as plt for i in range(200): matrix = complex_calculation() plt.set_cmap("gray") plt.imshow(matrix) plt.savefig("frame{0}.png".format(i)) The matrix, from numpy, is not huge --- 300 x 600 of doubles. Even if I do not save the figure and instead update an on-screen plot, it's even slower. Surely I must be abusing pyplot. (Matlab can do this, no problem.) How do I speed this up?

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  • AFP painfully slow

    - by yairchu
    Copying a file using AFP took 40 minutes but using scp it only took 7 mins. Why is AFP so slow? My setup: D-Link DIR-300 wifi router iMac with Snow-Leopard serves AFP Macbook with Leopard is the client

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  • Monitoring slow nginx/unicorn requests

    - by injekt
    I'm currently using Nginx to proxy requests to a Unicorn server running a Sinatra application. The application only has a couple of routes defined, those of which make fairly simple (non costly) queries to a PostgreSQL database, and finally return data in JSON format, these services are being monitored by God. I'm currently experiencing extremely slow response times from this application server. I have another two Unicorn servers being proxied via Nginx, and these are responding perfectly fine, so I think I can rule out any wrong doing from Nginx. Here is my God configuration: # God configuration APP_ROOT = File.expand_path '../', File.dirname(__FILE__) God.watch do |w| w.name = "app_name" w.interval = 30.seconds # default w.start = "cd #{APP_ROOT} && unicorn -c #{APP_ROOT}/config/unicorn.rb -D" # -QUIT = graceful shutdown, waits for workers to finish their current request before finishing w.stop = "kill -QUIT `cat #{APP_ROOT}/tmp/unicorn.pid`" w.restart = "kill -USR2 `cat #{APP_ROOT}/tmp/unicorn.pid`" w.start_grace = 10.seconds w.restart_grace = 10.seconds w.pid_file = "#{APP_ROOT}/tmp/unicorn.pid" # User under which to run the process w.uid = 'web' w.gid = 'web' # Cleanup the pid file (this is needed for processes running as a daemon) w.behavior(:clean_pid_file) # Conditions under which to start the process w.start_if do |start| start.condition(:process_running) do |c| c.interval = 5.seconds c.running = false end end # Conditions under which to restart the process w.restart_if do |restart| restart.condition(:memory_usage) do |c| c.above = 150.megabytes c.times = [3, 5] # 3 out of 5 intervals end restart.condition(:cpu_usage) do |c| c.above = 50.percent c.times = 5 end end w.lifecycle do |on| on.condition(:flapping) do |c| c.to_state = [:start, :restart] c.times = 5 c.within = 5.minute c.transition = :unmonitored c.retry_in = 10.minutes c.retry_times = 5 c.retry_within = 2.hours end end end Here is my Unicorn configuration: # Unicorn configuration file APP_ROOT = File.expand_path '../', File.dirname(__FILE__) worker_processes 8 preload_app true pid "#{APP_ROOT}/tmp/unicorn.pid" listen 8001 stderr_path "#{APP_ROOT}/log/unicorn.stderr.log" stdout_path "#{APP_ROOT}/log/unicorn.stdout.log" before_fork do |server, worker| old_pid = "#{APP_ROOT}/tmp/unicorn.pid.oldbin" if File.exists?(old_pid) && server.pid != old_pid begin Process.kill("QUIT", File.read(old_pid).to_i) rescue Errno::ENOENT, Errno::ESRCH # someone else did our job for us end end end I have checked God status logs but it appears CPU and Memory Usage are never out of bounds. I also have something to kill high memory workers, which can be found on the GitHub blog page here. When running a tail -f on the Unicorn logs I see some requests, but they're far and few between, when I was at around 60-100 a second before this trouble seemed to have arrived. This log also shows workers being reaped and started as expected. So my question is, how would I go about debugging this? What are the next steps I should be taking? I'm extremely baffled that the server will sometimes respond quickly, but at others time it's very slow, for long periods of time (which may or may not be peak traffic times). Any advice is much appreciated.

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  • Monitoring MySQL SELECT/WRITE/UPDATE/SLOW queries in Nagios

    - by imaginative
    There's ways to get performance graphs with several monitoring software packages out there such as ZenOSS. There's a plugin available that will graph MySQL based SELECT/WRITE/SLOW queries in a nice rrd style graph. I'm curious if there is a way to also get similar graphs available in Nagios 3.0? I know Nagios has tools like pnp and can integrate rrd, but is there something readily available that can plugin to monitor those MySQL specifics?

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  • slow pppoe connection using Ubuntu 9.10

    - by Radu
    I have a Compaq Presario CQ61, instaled Ubuntu 9.10 and Windows 7 on it. It works great except the PPPoE connection in Ubuntu, when i dial in Windows my download speed reach up to 91 Mb, rebooted in Ubuntu, downloaded same file from the same server with a speed of maximum 3 Mb, cheked in Windows again 80 - 90 Mb constant. I can't figure what slow's the internet connection in Ubuntu. Anyone has an ideea on this problem ? (NO iptables configured, NO HTB, CBQ ...etc configured) . Thank you

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  • Why is the vSphere console view so slow?

    - by blade
    Hi, Why is the Console view on the vSphere client so slow? It's a real shame because it's a shame to have to establish an RDP session every time you work on one of the VMs because of the speed of the console (I saw a tool to right click and open an RDP session to a VM in vSphere Client/ESX but this was not reliable). The Workstation console view is very smooth so I'd expect the vSphere Client console view to be very smooth. Thanks

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  • Network transfer from host to VM very slow - VMWare Server & Windows 2003 Server

    - by barfoon
    Hey everyone, Im trying to transfer a file from a Windows 7 host running VMWare Server to a Windows 2003 server VM, and it's painfully slow. I've tried adding/adjusting registry keys and settings found on KB articles, and still nothing. Ive tried this: http://support.microsoft.com/kb/898468 http://kb.vmware.com/selfservice/microsites/search.do?language=en_US&cmd=displayKC&externalId=1619 Vmware tools are installed. Any ideas? Thanks,

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  • Slow Memcached: Average 10ms memcached `get`

    - by Chris W.
    We're using Newrelic to measure our Python/Django application performance. Newrelic is reporting that across our system "Memcached" is taking an average of 12ms to respond to commands. Drilling down into the top dozen or so web views (by # of requests) I can see that some Memcache get take up to 30ms; I can't find a single use of Memcache get that returns in less than 10ms. More details on the system architecture: Currently we have four application servers each of which has a memcached member. All four memcached members participate in a memcache cluster. We're running on a cloud hosting provider and all traffic is running across the "internal" network (via "internal" IPs) When I ping from one application server to another the responses are in ~0.5ms Isn't 10ms a slow response time for Memcached? As far as I understand if you think "Memcache is too slow" then "you're doing it wrong". So am I doing it wrong? Here's the output of the memcache-top command: memcache-top v0.7 (default port: 11211, color: on, refresh: 3 seconds) INSTANCE USAGE HIT % CONN TIME EVICT/s GETS/s SETS/s READ/s WRITE/s cache1:11211 37.1% 62.7% 10 5.3ms 0.0 73 9 3958 84.6K cache2:11211 42.4% 60.8% 11 4.4ms 0.0 46 12 3848 62.2K cache3:11211 37.5% 66.5% 12 4.2ms 0.0 75 17 6056 170.4K AVERAGE: 39.0% 63.3% 11 4.6ms 0.0 64 13 4620 105.7K TOTAL: 0.1GB/ 0.4GB 33 13.9ms 0.0 193 38 13.5K 317.2K (ctrl-c to quit.) ** Here is the output of the top command on one machine: ** (Roughly the same on all cluster machines. As you can see there is very low CPU utilization, because these machines only run memcache.) top - 21:48:56 up 1 day, 4:56, 1 user, load average: 0.01, 0.06, 0.05 Tasks: 70 total, 1 running, 69 sleeping, 0 stopped, 0 zombie Cpu(s): 0.0%us, 0.0%sy, 0.0%ni, 99.7%id, 0.0%wa, 0.0%hi, 0.0%si, 0.3%st Mem: 501392k total, 424940k used, 76452k free, 66416k buffers Swap: 499996k total, 13064k used, 486932k free, 181168k cached PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND 6519 nobody 20 0 384m 74m 880 S 1.0 15.3 18:22.97 memcached 3 root 20 0 0 0 0 S 0.3 0.0 0:38.03 ksoftirqd/0 1 root 20 0 24332 1552 776 S 0.0 0.3 0:00.56 init 2 root 20 0 0 0 0 S 0.0 0.0 0:00.00 kthreadd 4 root 20 0 0 0 0 S 0.0 0.0 0:00.00 kworker/0:0 5 root 20 0 0 0 0 S 0.0 0.0 0:00.02 kworker/u:0 6 root RT 0 0 0 0 S 0.0 0.0 0:00.00 migration/0 7 root RT 0 0 0 0 S 0.0 0.0 0:00.62 watchdog/0 8 root 0 -20 0 0 0 S 0.0 0.0 0:00.00 cpuset 9 root 0 -20 0 0 0 S 0.0 0.0 0:00.00 khelper ...output truncated...

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  • slow pppoe connection using Ubuntu 9.10

    - by Radu
    I have a Compaq Presario CQ61, instaled Ubuntu 9.10 and Windows 7 on it. It works great except the PPPoE connection in Ubuntu, when i dial in Windows my download speed reach up to 91 Mb, rebooted in Ubuntu, downloaded same file from the same server with a speed of maximum 3 Mb, cheked in Windows again 80 - 90 Mb constant. I can't figure what slow's the internet connection in Ubuntu. Anyone has an ideea on this problem ? (NO iptables configured, NO HTB, CBQ ...etc configured) . Thank you

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  • Linux server very slow after IP change and synflood attack

    - by Johannes Ruof
    our server experienced a synflood attack and we used the csf firewall synflood settings to block it. Our server administrators also changed the IP of the server to a new one and blackholed the old IP. The attack went over and I changed the synflood settings back. However the server is still very slow, with a very low CPU usage and very low traffic on the website. Does anybody have an idea what might be causing this? The server is a CENTOS 6.4 x86_64 Thanks in advance, J. Ruof

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  • Why is Windows 7 slow resume from suspend?

    - by John McC
    I have Windows 7 on an HP Mini 5101. It is can be very slow to resume from suspend (not hibernate) state. The time from power on to the login prompt varies from say 10 sec to over a minute. This machine mainly gets used for sofa surfing so usually only Firefox and gtalk are running. Any suggestions on how to achieve Mac-like start-up or suggestions on how to track down the problem appreciated.

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  • Upload of photos from cf card to pc is super slow

    - by Sharon
    I have a new custom built pc. It has 8B of RAM and was working like a dream. Suddenly it is super slow and taking hours to download photos that used to take just minutes. I notice that there is 8GB RAM but only 3,25GB usable. could this be the problem? If so how to I change it? I'm using Windows 7

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  • Check mysql slow queries

    - by Rafal Kaminski
    Is it possible to monitoring mysql like: if some queries is run more then 300 seconds - it will be warnings if some queries is run more then 500 seconds - it will be critical I tried: /usr/lib/nagios/plugins/check_mysql_health --hostname localhost --username icinga --password XXX --mode slow-queries --warning 300 But is show only rate slow_queries/per second :( Do you have some idea how i can monitoring sth. like i want? Thank you for help. Br,

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  • Can the mysql slow query log show milliseconds?

    - by Chase Seibert
    The mysql slow query log shows query time in whole integers. # Query_time: 0 Lock_time: 0 Rows_sent: 177 Rows_examined: 177 SELECT ... # Query_time: 1 Lock_time: 0 Rows_sent: 56 Rows_examined: 208 SELECT ... There was a microsecond patch to allow mysql to be configured to log queries that take longer than X microseconds to run. But is there a way to have the log output the query time in either milliseconds or microseconds?

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  • Very slow printing from print server

    - by evolvd
    Print server is a VM on Xen The VM is Windows 2003 32bit. During the issue the VM is not being taxed in anyway, cpu, memory, hd read/write, and network speed is all good. The problem that I see is the transfer of the print file from the print server to the printer. The 80Mb file is transferred from the client to the print server in about 2 minutes but then it takes about 2 hours for that file to be sent to the printer. I can't figure out why this would just start to happen. The printer is rebooted every evening and is just used for one large print job in the morning. The server has been rebooted with no effect I changed the spool option to send the entire spool to the server before printing starts and it had no effect. This printer problem did happen to come about after some changes to the Xen environment. The Xen servers changed from using HBA NIC cards to software iscsi and a new switch was put in. I don't think this is related to the problem since all the speeds on the VMs are better now. The changed happened on Saturday and the first print to this printer happened on Monday morning. I'm just putting that out there but like I said I don't think it is related but I don't want to rule it out. At this point I don't have many other options besides the physical layer. I can switch out network cable that goes to the printer and I might be able to print the same job to another printer. I wont be able to test those things out till this afternoon though. Any other ideas or test I could do to try to find the reason for the slow speed? I forgot to say that this is only happening when printing to this one printer. ===Update=== I found out that there are a few printers that currently have this issue, not just the one. There are over 30 printers on the server though so I know it's not happening to all of them. I printed a large pdf doc from the server and it was able to print at the normal speed. If the machine sends the large print request it gets to the server fine but then slow to get from the server to the printer. If sent directly from the printer it gets to the printer at the normal speed. The question now is why is there a speed difference when it comes from the machine and why would it start now?

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  • linux is runing slow

    - by karan
    I am using open suse 11.3 .my laptop is running to slow and dmesg is showing following error: 733.162161] psmouse.c: TouchPad at isa0060/serio4/input0 lost synchronization, throwing 5 bytes away. [ 774.230841] psmouse.c: TouchPad at isa0060/serio4/input0 lost synchronization, throwing 2 bytes away. [ 856.344570] psmouse.c: TouchPad at isa0060/serio4/input0 lost synchronization, throwing 1 bytes away. [ 898.451626] psmouse.c: TouchPad at isa0060/serio4/input0 lost synchronization, throwing 1 bytes away. is there any way i could see the problem and solve it....

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  • Linux server became extremely slow

    - by Ariel Aharonson
    I have a file sharing website, and my files hosted in a server with those system specifications: 32GB RAM 12x3TB 2x Intel Quad Core E5620 I have files in this server up to 4gb for each file. 446gb is full (/36TB) [root@hosted-by ~]# df -h Filesystem Size Used Avail Use% Mounted on /dev/sda2 50G 2.7G 44G 6% / tmpfs 16G 0 16G 0% /dev/shm /dev/sda1 97M 57M 36M 62% /boot /dev/mapper/VolGroup01-LogVol00 33T 494G 33T 2% /home And take a look at this: Why is the wa% so high? (I think that what makes the server to be so slow)

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  • http port 80 slow, while other ports are fine

    - by lydonchandra
    I am using ADSL2+, and the sustained connection can go up to 1.3MB/s, but recently the HTTP connection has been quite slow ( other port i.e. ftp, torrent, etc are fine). I am using Netgear modem/router for my ADSL connection, and am using Netgear switches for my LAN (connected to the modem). What can go wrong and how can I investigate?

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  • Windows 7 driver search woefully slow

    - by askvictor
    Any thoughts on why the driver search (when installing a usb device) on windows 7 is woefully slow? Even when I click to disable trying to get a driver from windows update, it still takes 10min+ to either find a driver, or bail out. Is there a way to speed this up, or alternately, disable windows trying to find drivers, so I can manually install them in device manager?

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  • Slow tab completion for paths in`make' arguments

    - by ajwood
    When I'm specifying an argument for make like PREFIX_PATH=/some/path/to/prefix/ I sometimes experience very slow completion for my directories (a few seconds). It's annoying when I've got several variables to specify. To get around the problem I've been typing out the variables first to get regular completion speed, then hitting home' to insertmake` that the start of my command line. What is happening and how can I fix it?

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  • Ubuntu Deluge checking downloads at start-up slow

    - by solomongaby
    I am downloading a very large torrent (~60GB) and when deluge clients starts up it takes a lot of time to check the parts downloaded during witch it uses a lot the hardisk that leads to a very slow computer. Is there a way to skip this checking ? or make it be less aggressive on the hardrive ?

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