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  • Spring MVC with annotations: how to beget that method always is called

    - by TheStijn
    hi, I'm currently migrating a project that is using Spring MVC without annotations to Spring MVC with annotations. This is causing less problems than expected but I did come across one issue. In my project I have set up an access mechanisme. Whether or not a User has access to a certain view depends on more than just the role of the User (e.g. it also depends on the status of the entity, the mode (view/edit), ...). To address this I had created an abstract parent controller which has a method hasAccess. This method calls also other methods like getAllowedEditStatuses which are here and there overridden by the child controllers. The hasAccess method gets called from the showForm method (below code was minimized for your readability): @Override protected ModelAndView showForm(final HttpServletRequest request, final HttpServletResponse response, final BindException errors) throws Exception { Integer id = Integer.valueOf(request.getParameter("ID")); Project project = this.getProject(id); if (!this.hasAccess(project, this.getActiveUser())) { return new ModelAndView("errorNoAccess", "code", project != null ? project.getCode() : null); } return this.showForm(request, response, project, errors); } So, if the User has no access to the view then he gets redirected to an error page. Now the 'pickle': how to set this up when using annotations. There no longer is a showForm or other method that is always called by the framework. My (and maybe your) first thought was: simply call this method from within each controller before going to the view. This would of course work but I was hoping for a nicer, more generic solution (less code duplication). The only other solution I could think of is preceeding the hasAccess method with the @ModelAttribute annotation but this feels a lot like raping the framework :-). So, does anyone have a (better) idea? thanks, Stijn

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  • How can I setup Hudson to use the same repository for different projects and maintain separate chang

    - by Allen
    I typically setup SVN to host 1 big project per repository but a lot of our infrastructure has changed and we now have one main SVN server that has a hierarchy like so Branches Tags Trunk Project1 files & folders Project2 files & folders Project3 files & folders Projects1,2, and 3 do not share anything amongst themselves, they are independent projects each with their own solution file to be built. I can setup projects in Hudson like so Repository Url: http://server/svn/MainRepository Local module directory (optional): /Trunk/Project1 And that will maintain a separate workspace for each project, but every time you commit to Project 2 or Project 3, a build gets kicked off in Hudson for every project based in that repository. Also, any commit made anywhere in the repository is pulled down and inserted into the Hudson changelog for all of them. I know the easiest solution would be to simply separate every project into its own repository. However, if I couldn't do that due to various reasons, is there a feasible way to achieve the functionality that having separate repositories gets me? I want commits to the sub folder of project 1 to only affect project 1. No other project's commits should cause project 1 to build and project 1's changelog in Hudson should only have commit notes from project 1.

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  • Vertically center a fluid image in a fluid container

    - by Ferdy
    I certainly do not want to add to the pile of vertical alignments CSS questions, but I've spent hours trying to find a solution to no avail yet. Here's the situation: I am building a slideshow gallery of images. I want the images to be displayed as large as the user's window allows. So I have this outer placeholder: <section class="photo full"> (Yes, I'm using HTML5 elements). Which has the following CSS: section.photo.full { display:inline-block; width:100%; height:100%; position:absolute; overflow:hidden; text-align:center; } Next, the image is placed inside it. Depending on the orientation of the image, I set either the width or height to 75%, and the other axis to auto: $wide = $bigimage['width'] >= $bigimage['height'] ? true: false; ?> <img src="<?= $bigimage['url'] ?>" width="<?= $wide? "75%" : "auto"?>" height="<?= $wide? "auto" : "75%"?>"/> So, we have a fluid outer container, with inside a fluid image. The horizontal centering of the image works, yet I cannot seem to find a way to vertically center the image within it's container. I have researched centering methods but most assume either the container or image has a known width or height. Then there is the display:table-cell method, which does not seem to work for me either. I'm stuck. I'm looking for a CSS solution, but am open to js solutions too.

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  • How to share data between SSRS Security and Data Processing extension?

    - by user2904681
    I've spent a lot of time trying to solve the issue pointed in title and have no found a solution yet. I use MS SSRS 2012 with custom Security (based on Form Authentication and ClaimsPrincipal) and Data Processing extensions. In Data extension level I need to apply filter programmatically based on one of the claim which I have access in Security extension level only. Here is the problem: I do know how to pass the claim from Security to Data Processing extension code... What I've tried: IAuthenticationExtension.LogonUser(string userName, string password, string authority) { ... ClaimsPrincipal claimsPrincipal = CreateClaimsPrincipal(...); Thread.CurrentPrincipal = claimsPrincipal; HttpContext.Current.User = claimsPrincipal; ... }; But it doesn't work. It seems SSRS overrides it within either GenericPrincipal or FormsIdentity internally. The possible workaround I'm thinking about (but haven't checked it yet): 1. Create HttpModule which will create HttpContext with all required information (minus: will be invoke getting claims each time - huge operation) 2. Write to custom SQL table to store logged users information which is required for Data extension and then read it 3. try somehow to append to cookies due to LogOn and then read each time on IAuthenticationExtension.GetUserInfo and fill HttpContext None of them seems to be a good solution. I would be grateful for any help/advise/comments.

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  • Is there a library that can decompile a method into an Expression tree, with support for CLR 4.0?

    - by Daniel Earwicker
    Previous questions have asked if it is possible to turn compiled delegates into expression trees, for example: http://stackoverflow.com/questions/767733/converting-a-net-funct-to-a-net-expressionfunct The sane answers at the time were: It's possible, but very hard and there's no standard library solution. Use Reflector! But fortunately there are some greatly-insane/insanely-great people out there who like reverse engineering things, and they make difficult things easy for the rest of us. Clearly it is possible to decompile IL to C#, as Reflector does it, and so you could in principle instead target CLR 4.0 expression trees with support for all statement types. This is interesting because it wouldn't matter if the compiler's built-in special support for Expression<> lambdas is never extended to support building statement expression trees in the compiler. A library solution could fill the gap. We would then have a high-level starting point for writing aspect-like manipulations of code without having to mess with raw IL. As noted in the answers to the above linked question, there are some promising signs but I haven't succeeded in finding if there's been much progress since by searching. So has anyone finished this job, or got very far with it? Note: CLR 4.0 is now released. Time for another look-see.

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  • forks in C - exercise

    - by Zka
    I try to repeat and learn more advanced uses and options when cutting trees with forks in the jungle of C. But foolishly I find an example which should be very easy as I have worked with forks before and even written some code, but i can't understand it fully. Here comes : main() { if (fork() == 0) { if (fork() == 0) { printf("3"); } else if ((wait(NULL)) > 0) { printf("2"); } } else { if (fork() == 0) { printf("1"); exit(0); } if (fork() == 0) { printf("4"); } } printf("0"); return 0; } Possible solutions are : 3201040 3104200 1040302 4321000 4030201 1403020 where 2, 5 and 6 are correct answers. First of all, shouldn't there be four zeroes in the output? Second... How does one come to the solution at all? Been doing this on paper for almost an hour and I'm not even close to understanding why the given solution are more correct than the false ones (except for nr3 as it can't end with 2 since a 0 must follow). Anyone with his forks in check who can offer some good explanation?

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  • Microsoft Solver Foundation constraint

    - by emaster70
    Hello, I'm trying to use Microsoft Solver Foundation 2 to solve a fairly complicated situation, however I'm stuck with an UnsupportedModelException even when I dumb down the model as much as possible. Does anyone have an idea of what I'm doing wrong? Following is the least example required to reproduce the problematic behavior. var ctx = SolverContext.GetContext(); var model = ctx.CreateModel(); var someConstant = 1337.0; var decisionA = new Decision(Domain.Real, "decisionA"); var decisionB = new Decision(Domain.Real, "decisionB"); var decisionC = new Decision(Domain.Real, "decisionC"); model.AddConstraint("ca", decisionA <= someConstant); model.AddConstraint("cb", decisionB <= someConstant); model.AddConstraint("cc", decisionC <= someConstant); model.AddConstraint("mainConstraint", Model.Equal(Model.Sum(decisionA, decisionB, decisionC), someConstant)) model.AddGoal("myComplicatedGoal", GoalKind.Minimize, decisionC); var solution = ctx.Solve(); solution.GetReport().WriteTo(Console.Out); Console.ReadKey(); Please consider that my actual model should include, once complete, a few constraints in the form of a*a+b*a <= someValue, so if what I'm willing to do ultimately isn't supported, please let me know in advance. If that's the case I'd also appreciate a suggestion of some other solver with a .NET friendly interface that I could use (only well-known commercial packages, please). Thanks in advance

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  • Creating/Maintaining a large project-agnostic code library

    - by bufferz
    In order to reduce repetition and streamline testing/debugging, I'm trying to find the best way to develop a group of libraries that many projects can utilize. I'd like to keep individual executable relatively small, and have shared libraries for math, database, collections, graphics, etc. that were previously scattered among several projects and in many cases duplicated (bad!). This library is to be in an SVN repo and several programmers will be working on it. This library will be in constant development along with the executables that utilize it. For example, I want a code file in ProjectA to look something like the following: using MyCompany.Math.2D; //static 2D math methods using MyCompany.Math.3D; //static #D math methods using MyCompany.Comms.SQL; //static methods for doing simple SQLDB I/O using MyCompany.Graphics.BitmapOperations; //static methods that play with bitmaps So in my ProjectA solution file in VisualStudio, in order to develop/debug the MyCompany library I have to add several projects (Math, Comms, Graphics). Things get pretty cluttered and Solution files get out of date quickly between programmer SVN commits. I'm just looking for a high level approach to maintaining a large, shared code base in an SCN repository. I am fully willing to radically redesign my approach. I'm looking for that warm fuzzy feeling you get when you're design approach is spot on and development is fluid and natural. And ideas? Thanks!!

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  • VS2008 - Find and Replace - Searches too many files.

    - by Pam Bullock
    I've used VS2008 a lot and have never had this problem. However, I started a new job and am using a new machine. Ever since I've gotten here the VS Find feature has been acting funny. I first noticed it when I did a replace all for "All Open Files". The project wouldn't build because the values had actually been replaced in other files within the solution that were not open and didn't even open after I pressed replace all. I have found that I can never use replace all on this machine because I never know what it is going to do. Even if I just do a find on "Current Document", once it's done with the document and I should get that message that says "No more matches found" it actually OPENS another random file from my solution where there is a match and keeps on going. It seems to never make any difference what "Look in" option I've chosen. My coworker has an install off the same disk and claims to not be experiencing this. We're in the middle of a stressful, huge project with a close deadline so I know my boss won't let me do a reinstall. Has anyone else ever had this happen? Anyone know a fix?? Thanks, Pam

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  • Cross-domain templating with Javascript

    - by Husky
    I'm currently building a Javascript library that can be used to easily create embeddable media based on the URL of a media file, and then be controlled using Javascript methods and events (think something like the Flash / Silverlight JW player). Of course, i could simply cat all the html tags from the Javascript library and send that to the browser: function player(url) { document.write('<object type="foo"><param name="something" value="bar">' + <param name="source" value=" + url + '/></object>'); } But i think this is a very ugly practice that tends to create unmanageable code that is unreadable when you review it a few weeks later. So, a templating solution seems to be the way to go. I've been looking to EJS because it loads the templates using AJAX, so you can manage your templates in separate file instead of directly on the HTML page. There's one 'gotcha' with that: my library needs to be completely cross-domain: the library itself could be located on foo.com while the serving site could be located on bar.com. So if bar.com would want to add a media player using the library it needs to do an AJAX call to a template located on foo.com, which won't work because of the same-origin policy in browsers. AFAIK, there's no library that uses something like JSONP to read and write templates to get around this problem. Could anyone point me to a solution for this problem?

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  • How to develop JSP/Servlets Web App using MVC pattern?

    - by A.S al-shammari
    I'm developing a JSP/Servlets web app (no frameworks). I want to use MVC pattern. I designed my project like this : Controller :a servlet that reads a request, extracts the values,communicates with model objects and gives information to a JSP page. View : JSP Pages. Model : Java Classes / Java Beans .. etc . The problem : Index.jsp is the starting point (default page) in my web site. So, the Index.jsp becomes the controller to parse the request! .For example , the following request : index.jsp?section=article&id=10 parsed in index.jsp as following : <div class="midcol"> <!-- Which section? --> <%String fileName = request.getParameter("section"); if (fileName == null) { fileName = "WEB-INF/jspf/frontpage.jsp"; } else { fileName = "WEB-INF/jspf/" + fileName + ".jsp"; } %> <jsp:include page='<%= fileName%>' /> </div> Here, I can't force the servlet to be a controller .. because the index.jsp is the controller here since it's the starting point! Is there any solution to forward the request from index.jsp to the servlet and then go back to index.jsp ? Or any solution that achieves the MVC goal - the servlet should be the controller - ? I'm thinking of making a FrontPageController servlet as default page instead of index.jsp ! but I don't know if it's a perfect idea ?!

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  • Caching page by parts; how to pass variables calculated in cached parts into never-cached parts?

    - by Kirzilla
    Hello, Let's imagine that I have a code like this... if (!$data = $cache->load("part1_cache_id")) { $item_id = $model->getItemId(); ob_start(); echo 'Here is the cached item id: '.$item_id; $data = ob_get_contents(); ob_end_clean(); $cache->save($data, "part1_cache_id"); } echo $data; echo never_cache_function($item_id); if (!$data_2 = $cache->load("part2_cache_id")) { ob_start(); echo 'Here is the another cached part of the page...'; $data_2 = ob_get_contents(); ob_end_clean(); $cache->save("part2_cache_id"); } echo $data_2; As far as you can see I need to pass $item_id variable into never_cache_function, but if fist part is cached (part1_cache_id) then I have no way to get $item_id value. I see the only solution - serialize all data from fist part (including $item_id value); then cache serialized string and unserialize it everytime when script is executed... Something like this... if (!$data = $cache->load("part1_cache_id")) { $item_id = $model->getItemId(); $data['item_id'] = $item_id; ob_start(); echo 'Here is the cached item id: '.$item_id; $data['html'] = ob_get_contents(); ob_end_clean(); $cache->save( serialize($data), "part1_cache_id" ); } $data = unserialize($data); echo $data['html'] echo never_cache_function($data['item_id']); Is there any other ways for doing such trick? I'm looking for the most high performance solution. Thank you UPDATED And another question is - how to implement such caching into controller without separating page into two templates? Is it possible? PS: Please, do not suggest Smarty, I'm really interested in implementing custom caching.

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  • Email not sent until application closes

    - by Tester101
    I have an application that uses SmtpClient to send E-Mail, but the E-Mails are not sent until the application closes. I have searched and searched to find a solution to the problem, but I am not able to find one. The system does have Symantec anti-virus installed, which could possibly be the problem. Does anybody have a solution to this problem? Here is the code I am using. public class EMail { private string server; public string Server {get{return this.server;}set{this.server = value;}} private string to; public string To {get{return this.to;}set{this.to = value;}} private string from; public string From {get{return this.from;}set{this.from = value;}} private string subject; public string Subject {get{return this.subject;}set{this.subject = value;}} private string body; public string Body {get{return this.body;}set{this.body = value;}} public EMail() {} public EMail(string _server, string _to, string _from, string _subject, string _body) { this.Server = _server; this.To = _to; this.From = _from; this.Subject = _subject; this.Body = _body; } public void Send() { System.Net.Mail.MailMessage message = new System.Net.Mail.MailMessage(this.From, this.To, this.Subject, this.Body); message.IsBodyHtml = true; System.Net.Mail.SmtpClient client = new System.Net.Mail.SmtpClient(this.Server); client.DeliveryMethod = System.Net.Mail.SmtpDeliveryMethod.Network; //I have tried this, but it still does not work. //client.ServicePoint.ConnectionLeaseTimeout = 0; try { client.Send(message); } catch(System.Exception ex) { System.Windows.Forms.MessageBox.Show(ex.ToString()); } message.Dispose(); } }

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  • Random Pairings that don't Repeat

    - by Andrew Robinson
    This little project / problem came out of left field for me. Hoping someone can help me here. I have some rough ideas but I am sure (or at least I hope) a simple, fairly efficient solution exists. Thanks in advance.... pseudo code is fine. I generally work in .NET / C# if that sheds any light on your solution. Given: A pool of n individuals that will be meeting on a regular basis. I need to form pairs that have not previously meet. The pool of individuals will slowly change over time. For the purposes of pairing, (A & B) and (B & A) constitute the same pair. The history of previous pairings is maintained. For the purpose of the problem, assume an even number of individuals. For each meeting (collection of pairs) and individual will only pair up once. Is there an algorithm that will allow us to form these pairs? Ideally something better than just ordering the pairs in a random order, generating pairings and then checking against the history of previous pairings. In general, randomness within the pairing is ok.

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  • How to use a int2 database-field as a boolean in Java using JPA/Hibernate

    - by mg
    Hello... I write an application based on an already existing database (postgreSQL) using JPA and Hibernate. There is a int2-column (activeYN) in a table, which is used as a boolean (0 = false (inactive), not 0 = true (active)). In the Java application i want to use this attribute as a boolean. So i defined the attribute like this: @Entity public class ModelClass implements Serializable { /*..... some Code .... */ private boolean active; @Column(name="activeYN") public boolean isActive() { return this.active; } /* .... some other Code ... */ } But there ist an exception because Hibernate expects an boolean database-field and not an int2. Can i do this mapping i any way while using a boolean in java?? I have a possible solution for this, but i don't really like it: My "hacky"-solution is the following: @Entity public class ModelClass implements Serializable { /*..... some Code .... */ private short active_USED_BY_JPA; //short because i need int2 /** * @Deprecated this method is only used by JPA. Use the method isActive() */ @Column(name="activeYN") public short getActive_USED_BY_JPA() { return this.active_USED_BY_JPA; } /** * @Deprecated this method is only used by JPA. * Use the method setActive(boolean active) */ public void setActive_USED_BY_JPA(short active) { this.active_USED_BY_JPA = active; } @Transient //jpa will ignore transient marked methods public boolean isActive() { return getActive_USED_BY_JPA() != 0; } @Transient public void setActive(boolean active) { this.setActive_USED_BY_JPA = active ? -1 : 0; } /* .... some other Code ... */ } Are there any other solutions for this problem? The "hibernate.hbm2ddl.auto"-value in the hibernate configuration is set to "validate". (sorry, my english is not the best, i hope you understand it anyway)..

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  • How to tell axis2 to use an existing object as a service?

    - by Christian Hausknecht
    I am trying to expose some methods of a running application as a webservice. The core idea is to use an embedded web-server and send the soap messages to the apache axis2 framework in order to invoke the services. The problem is, that axis2's createService methods only accept Classes as parameter, not existing objects. So I believe that axis2 itself creates an object of the service class and then uses it to call methods when an external service call arrives. But I need to pass an existing object for being used as a service, because I need to call methods of other objects of the running application within the service methods. So the "standard" way that axis2 creates a new instance of the service class and calls then its methods is obviously no sulution for me. So is there a way to realize this? Or is there another solution? Perhaps you can pass objects later on to the allready created service object by axis2? If there is another solution without axis2 I might consider that one. Basically I am only interested in exposing some functionality of a runnning application as a webservice.

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  • Objective-C function dispatch collisions; Or, how to achieve "namespaces"?

    - by fbrereto
    I have an application for Mac OS X that supports plugins that are intended to be loaded at the same time. Some of these plugins are built on top of a Cocoa framework that may receive updates in one plugin but not another. Given Objective-C's current method for function dispatching, any call from any plugin to a given Objective-C routine will go to the same routine every time. That means plugin A can find itself inside plugin B with a trivial Objective-C call! Obviously what we're looking for is for each plugin to interact with its own version of the framework upon which it was built. I have been reading some on Objective-C and this particular need, but haven't found a definitive solution for it yet. Update: My use of the word "framework" above is misleading: the framework is a statically-linked library, built into the plugin(s) that need it. The way Objective-C handles dispatching, however, even these statically linked pieces of disparate code will co-mingle in the Objective-C dispatcher, leading to unintended consequences. Update 2: I'm still a bit fuzzy on the answer provided here, as it doesn't seem to propose a solution as much as an unproven hypothesis.

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  • What is the best way to iterate over a large result set in JDBC/iBatis 3?

    - by paul_sns
    We're trying to iterate over a large number of rows from the database and convert those into objects. Behavior will be as follows: Result will be sorted by sequence id, a new object will be created when sequence id changes. The object created will be sent to an external service and will sometimes have to wait before sending another one (which means the next set of data will not be immediately used) We already have invested code in iBatis 3 so an iBatis solution will be the best approach for us (we've tried using RowBounds but haven't seen how it does the iteration under the hood). We'd like to balance minimizing memory usage and reducing number of DB trips. We're also open to pure JDBC approach but we'd like the solution to work on different databases. UPDATE: We need to make as few calls to DB as possible (1 call would be the ideal scenario) while also preventing the application to use too much memory. Are there any other solutions out there for this type of problem may it be pure JDBC or any other technology? Thanks and hope to hear your insights on this.

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  • Handling MVC2 variables with hyphens in their name

    - by Jaxidian
    I'm working with some third-party software that creates querystring parameters with hyphens in their names. I was taking a look at this SO question and it seems like their solution is very close to what I need but I'm too ignorant to the underlying MVC stuff to figure out how to adapt this to do what I need. Ideally, I'd like to simply replace hyphens with underscores and that would be a good enough solution. If there's a better one, then I'm interested in hearing it. An example of a URL I want to handle is this: http://localhost/app/Person/List?First-Name=Bob with this Controller: public ActionResult List(string First_Name) { {...} } To repeat, I cannot change the querystring being generated so I need to support it with my controller somehow. But how? For reference, below is the custom RouteHandler that is being used to handle underscores in controller names and action names from the SO question I referenced above that we might be able to modify to accomplish what I want: public class HyphenatedRouteHandler : MvcRouteHandler { protected override IHttpHandler GetHttpHandler(RequestContext requestContext) { requestContext.RouteData.Values["controller"] = requestContext.RouteData.Values["controller"].ToString().Replace("-", "_"); requestContext.RouteData.Values["action"] = requestContext.RouteData.Values["action"].ToString().Replace("-", "_"); return base.GetHttpHandler(requestContext); } }

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  • Error handling in PHP

    - by Industrial
    Hi guys, We're building a PHP app based on Good old MVC (codeigniter framework) and have run into trouble with a massive chained action that consists of multiple model calls, that together is a part of a big transaction to the database. We want to be able to do a list of actions and get a status report of each one back from the function, whatever the outcome is. Our first initial idea was to utilize the exceptions of PHP5, but since we want to also need status messages that doesnt break the execution of the script, this was our solution that we came up with. It goes a little something like this: $sku = $this->addSku( $name ); if ($sku === false) { $status[] = 'Something gone terrible wrong'; $this->db->trans_rollback(); return $status; } $image= $this->addImage( $filename); if ($image=== false) { $error[] = 'Image could not be uploaded, check filesize'; $this->db->trans_rollback(); return $status; } Our controller looks like this: $var = $this->products->addProductGroup($array); if (is_array($var)) { foreach ($var as $error) { echo $error . '<br />'; } } It appears to be a very fragile solution to do what we need, but it's neither scalable, neither effective when compared to pure PHP exceptions for instance. Is this really the way that this kind of stuff generally is handled in MVC based apps? Thanks!

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  • Hotkeys in webapps

    - by Johoo
    When creating webapps, is there any guidelines on which keys you can use for your own hotkeys without overriding too many of the browsers default hotkeys. For example i might want to have a custom copy command for copying entire sets of data that only makes sense for my program instead of just text. The logical combination for this would be ctrl+c but that would destroy the default copy hotkey for normal text. One solution i was thinking about is to only catch the hotkey when it "makes sense" but when you use some advanced custom selection it might be hard to differentiate if your data is focused, if text is selected or both. Right now i am only using single keys as the hotkey, so just 'c' for the example above and this seems to be what most other sites are doing too. The problem is that if you have text input this doesn't work so good. Is this the best solution? To clarify I'm talking about advanced webapps that behave more like normal programs and not just some website presenting information(even though i think these guidlines would be valid for both cases). So for the copy example it might not be a big deal if you can't copy the text in the menu but when ctrl+tab, alt+d or ctrl+e doesn't work i would be really pissed, cough flash cough.

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  • Simple way to embed an MP3 audio file in a (static) HTML file, starting to play at a specifc time?

    - by Marcel
    Hi all, I want to produce a simple, static HTML file, that has one or more embedded MP3 files in it. The idea is to have a simple mean of listening to specific parts of an mp3 file. On a single click on a visual element, the sound should start to play; However, not from the beginning of the file, but from a specified starting point in that file (and play to the end of the file). This should work all locally from the client's local filesystem, the HTML file and the MP3 files do not reside on a webserver. So, how to play the MP3 audio from a specific starting point? The solution I am looking for should be as simple as possible, while working on most browsers, including IE, Firefox and Safari. Note: I know the <embed> tag as described here, but this seems not to work with my target browsers. Also I have read about jPlayer and other Java-Script-based players, but since I have never coded some JavaScript, I would prefer a HTML-only solution, if possible.

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  • How can I apply a PSSM efficiently?

    - by flies
    I am fitting for position specific scoring matrices (PSSM aka Position Specific Weight Matrices). The fit I'm using is like simulated annealing, where I the perturb the PSSM, compare the prediction to experiment and accept the change if it improves agreement. This means I apply the PSSM millions of times per fit; performance is critical. In my particular problem, I'm applying a PSSM for an object of length L (~8 bp) at every position of a DNA sequence of length M (~30 bp) (so there are M-L+1 valid positions). I need an efficient algorithm to apply a PSSM. Can anyone help improve performance? My best idea is to convert the DNA into some kind of a matrix so that applying the PSSM is matrix multiplication. There are efficient linear algebra libraries out there (e.g. BLAS), but I'm not sure how best to turn an M-length DNA sequence into a matrix M x 4 matrix and then apply the PSSM at each position. The solution needs to work for higher order/dinucleotide terms in the PSSM - presumably this means representing the sequence-matrix for mono-nucleotides and separately for dinucleotides. My current solution iterates over each position m, then over each letter in word from m to m+L-1, adding the corresponding term in the matrix. I'm storing the matrix as a multi-dimensional STL vector, and profiling has revealed that a lot of the computation time is just accessing the elements of the PSSM (with similar performance bottlenecks accessing the DNA sequence). If someone has an idea besides matrix multiplication, I'm all ears.

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  • How best to implement "favourites" feature? (like favourite products on a data driven website)

    - by ClarkeyBoy
    Hi, I have written a dynamic database driven, object oriented website with an administration frontend etc etc. I would like to add a feature where customers can save items as "favourites", without having to create an account and login, to come back to them later, but I dont know how exactly to go about doing this... I see three options: Log favourites based on IP address and then change these to be logged against an account if the customer then creates an account; Force customers to create an account to be able to use this functionality; Log favourites based on IP address but give users the option to save their favourites under a name they specify. The problem with option 1 is that I dont know much about IP addresses - my Dad thinks they are unique, but I know people have had problems with systems like this. The problem with 1 and 2 is that accounts have not been opened up to customers yet - only administrators can log in at the moment. It should be easy to alter this (no more than a morning or afternoons work) but I would also have to implement usergroups too. The problem with option 3 is that if user A saves a favourites list called "My Favourites", and then user B tries to save a list under this name and it is refused, user B will then be able to access the list saved by user A because they now know it already exists. A solution to this is to password protect lists, but to go to all this effort I may as well implement option 2. Of course I could always use option 4; use an alternative if anyone can suggest a better solution than any of the above options. So has anyone ever done something like this before? If so how did you go about it? What do you recommend (or not recommend)? Many thanks in advance, Regards, Richard

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  • Preserving SCRIPT tags (and more) in CKEditor

    - by Jonathan Sampson
    Update: I'm thinking the solution to this problem is in CKEDITOR.config.protectedSource(), but my regular-expression experience is proving to be too juvenile to handle this issue. How would I go about exempting all tags that contain the 'preserved' class from being touched by CKEditor? Is it possible to create a block of code within the CKEditor that will not be touched by the editor itself, and will be maintained in its intended-state until explicitly changed by the user? I've been attempting to input javascript variables (bound in script tags) and a flash movie following, but CKEditor continues to rewrite my pasted code/markup, and in doing so breaking my code. I'm working with the following setup: <script type="text/javascript"> var editor = CKEDITOR.replace("content", { height : "500px", width : "680px", resize_maxWidth : "680px", resize_minWidth : "680px", toolbar : [ ['Source','-','Save','Preview'], ['Cut','Copy','Paste','PasteText','PasteFromWord','-','Print', 'SpellChecker', 'Scayt'], ['Undo','Redo','-','Find','Replace','-','SelectAll','RemoveFormat'], ['Bold','Italic','Underline','Strike','-','Subscript','Superscript'], ['NumberedList','BulletedList','-','Outdent','Indent','Blockquote'], ['JustifyLeft','JustifyCenter','JustifyRight','JustifyBlock'], ['Link','Unlink','Anchor'], ['Image','Table','HorizontalRule','SpecialChar'] ] }); CKFinder.SetupCKEditor( editor, "<?php print url::base(); ?>assets/ckfinder" ); </script> UPDATE: I suppose the most ideal solution would be to preserve the contents of any tag that contains class="preserve" enabling much more than the limited exclusives.

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