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• Ubuntu 12.10, Unity, AMD 12.11 beta drivers, AMD APP SDK 2.7 and OpenCL detection of multiple gpus

  - by junkie

  I'm using Ubuntu 12.10, AMD 12.11 beta drivers, AMD APP SDK 2.7 and OpenCL. I have three amd radeon 7990s plugged in each of which are a dual 7970 so I have six gpus altogether. I plan to go up to eight in a few days. Windows couldn't use even 4 but linux works fine with 6 so far. The strange thing is that the six gpus are only detected by OpenCL in unity (the ubuntu default window manager). If I switch to e17, blackbox or fluxbox or anything else for that matter OpenCL only detects one. I'm using a simple OpenCL program to list all devices to check. I've also checked the output of aticonfig --list-adapters, fglxinfo and clinfo. The first two always show six in all window managers wheras clinfo shows 6 in unity but 1 gpu in all other WMs. I'm also using an X config generated by aticonfig --initial -f --adapter=all. I'm also only using one monitor. I've also checked using lsmod that the fglrx module is loaded in all WMs. So I have two questions. Why does OpenCL see six gpus only in unity? How can I enable six gpus on other lightweight WMs? Basically I'm getting at what determines how many gpus the OpenCL runtime sees? Thanks.

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• Remotely port forward/launch process or a client-less remote desktop app?

  - by DC177E

  I have an XP box running Logmein at a remote location behind a linksys router, which was running well for a whole of four days, until we had a power failure. Our ISP gave us a new IP, the machine restarted, and logmein did not autorun (or, at least, it did not automatically sign in), and our service (which may or may not be a Minecraft server with non-backed-up save files) also did not run upon startup. Logmein does not register the new IP (it still displays the old one). I have a DDNS updater service, so I do know the new dynamic address. I have tried using the built in XP remote desktop service, but, as with almost all non-cloud-based remote desktop services, it requires a port forward. Thus, I would appreciate it if anyone has any ideas as to: A: Any way of accessing our router remotely to forward the remote desktop port. I've seen the Remote Management option (forwarding the setup page to port 8080), but I do not have it enabled. I've tried UPnP, but again, the setup page for our router is not forwarded. B: Any way of remotely launching a process that does not require port forwarding (or uses ports 255XX, 18XXX, or 9000.), such as a remote console service built into XP. I realize this is a near impossibility. C: A Way to remotely start logmein, and sign in, which is likely a definite impossibility. Sorry if this is too specific for Stackexchange, or if I've put it into the wrong section (is SuperUser the correct place for this?). Ideas would, again be much appreciated, as shot-in-the-dark-like this may be.

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• Where is the documentation for MSBUILD arguments to run MSDEPLOY?

  - by Simon_Weaver

  There is an excellent PDC talk available here which describes the new MSDEPLOY features in Visual Studio 2010 - as well as how to deploy an application within TFS. The talk explains some of the command line parameters such as : /p:DeployOnBuild /p:DeployTarget=MsDeployPublish /p:CreatePackageOnPublish=True /p:MSDeployPublishMethod=InProc /p:MSDeployServiceURL=localhost /p:DeployIISAppApth="Default Web Site" But where is the documentation for this - explaining how they work and what i should use? Most of these turn up very few or zero results when searching. Isn't there some actual documentation for these parameters somewhere? I'd rather use these to deploy than try to add a command line exec command to run the package. I've managed to create a web deployment package, which TFS is copying to the output. But I'm ending up with all kinds of errors trying to actually deploy the package. Currently in my build configuration in TFS I have the following arguments for MSBuild Arguments /p:DeployOnBuild=True /p:DeployTarget=MsDeployPublish /p:Configuration=Release /p:CreatePackageOnPublish=True /p:DeployIisAppPath=staging.example.com /p:MsDeployServiceUrl=localhost This however gives me this error : Is there any actual real documentation for these arguments? It would probably take me about 5 minutes to get it running the package by the command line, but i want to get them deploying like this because it will simplify multiple configurations later.

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• How can I get TFS2010 to run MSDEPLOY for me through MSBUILD?

  - by Simon_Weaver

  There is an excellent PDC talk available here which describes the new MSDEPLOY features in Visual Studio 2010 - as well as how to deploy an application within TFS. You can use MSBUILD within TFS2010 to call through to MSDEPLOY to deploy your package to IIS. This is done by means of parameters to MSBUILD. The talk explains some of the command line parameters such as : /p:DeployOnBuild /p:DeployTarget=MsDeployPublish /p:CreatePackageOnPublish=True /p:MSDeployPublishMethod=InProc /p:MSDeployServiceURL=localhost /p:DeployIISAppPath="Default Web Site" But where is the documentation for this - I can't find any? I've been spending all day trying to get this to work and can't quite get it right and keep ending up with various errors. If I run the package's cmd file it deploys perfectly. But I want to get the whole deployment running through msbuild using these arguments and not a separate call to msdeploy or running the package .cmd file. How can I do this? PS. Yes I do have the Web Deployment Agent Service running. I also have the management service running under IIS. I've tried using both. Args I'm using : /p:DeployOnBuild=True /p:DeployTarget=MsDeployPublish /p:Configuration=Release /p:CreatePackageOnPublish=True /p:DeployIisAppPath=staging.example.com /p:MsDeployServiceUrl=https://staging.example.com:8172/msdeploy.axd /p:AllowUntrustedCertificate=True giving me : C:\Program Files (x86)\MSBuild\Microsoft\VisualStudio\v10.0\Web\Microsoft.Web.Publishing.targets (2660): VsMsdeploy failed.(Remote agent (URL https://staging.example.com:8172/msdeploy.axd?site=staging.example.com) could not be contacted. Make sure the remote agent service is installed and started on the target computer.) Error detail: Remote agent (URL https://staging.example.com:8172/msdeploy.axd?site=staging.example.com) could not be contacted. Make sure the remote agent service is installed and started on the target computer. An unsupported response was received. The response header 'MSDeploy.Response' was '' but 'v1' was expected. The remote server returned an error: (401) Unauthorized.

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• How to set "Run this program as an administrator" programatically.

  - by Patrick

  I'm having a problem with good ol' bdeadmin.exe in Vista. First, let's get the predictable responses out of the way: "You should not require your application to be elevated." This one does. C'est la vie. "You need to embed a manifest file." It is already compiled, it is many years old, the company that created it has no intention of doing it again, and it is installed from a Merge Module (MSM file). "BDE is obsolete, you should be using dbExpress" One and a half million lines of code. 'Nuff said. "Drop a manifest file next to the EXE." Tried that, did nothing. As a test, that same manifest file was able to make several other EXE files require elevation, just not the one I wanted. Something in there is preventing the external manifest from being read. "Create a shortcut and set SLDF_RUNAS_USER." Can't do that, it's a Control Panel applet. The only thing that worked was setting "Run this program as an administrator" under the Compatibility tab of its Properties window. I shouldn't have to tell users to do this. Bad for business. I need to have the installer do this. The MSM file uses a static path. Any ideas?

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• pass username and password to get-credential or run sql query without using invoke-sqlcmd in Powersh

  - by Emo

  I am trying to connect to a remote sql database and simply run the "select @@servername" query in Powershell. I'm trying to do this without using integrated security. I've been struggling with "get-credential" and "invoke-sqlcmd", only to find (I think), that you can't pass the password from "get-credential" to another Powershell cmdlets. Here's the code I'm using: add-pssnapin sqlserverprovidersnapin100 add-pssnapin sqlservercmdletsnapin100 load assemblies [Reflection.Assembly]::Load("Microsoft.SqlServer.Smo, Version=9.0.242.0, Culture=neutral, PublicKeyToken=89845dcd8080cc91") [Reflection.Assembly]::Load("Microsoft.SqlServer.SqlEnum, Version=9.0.242.0, Culture=neutral, PublicKeyToken=89845dcd8080cc91") [Reflection.Assembly]::Load("Microsoft.SqlServer.SmoEnum, Version=9.0.242.0, Culture=neutral, PublicKeyToken=89845dcd8080cc91") [Reflection.Assembly]::Load("Microsoft.SqlServer.ConnectionInfo, Version=9.0.242.0, Culture=neutral,PublicKeyToken=89845dcd8080cc91") connect to SQL Server $serverName = "HLSQLSRV03" $server = New-Object -typeName Microsoft.SqlServer.Management.Smo.Server -argumentList $serverName login using SQL authentication $server.ConnectionContext.LoginSecure=$false; $credential = Get-Credential $userName = $credential.UserName -replace("\","") $pass = $credential.Password $server.ConnectionContext.set_Login($userName) $server.ConnectionContext.set_SecurePassword($credential.Password) $DB = "Master" invoke-sqlcmd -query "select @@Servername" -database $DB -serverinstance $servername -username $username -password $pass If if just hardcode the password in at the end of the "invoke-sqlcmd" line, it works. Is this because you can't use "get-credential" with "invoke-sqlcmd"? If so...what are my alternatives? Thanks so much for you help Emo

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• Why can I run JUnit tests for my Spring project, but not a main method?

  - by FarmBoy

  I am using JDBC to connect to MySQL for a small application. In order to test without altering the real database, I'm using HSQL in memory for JUnit tests. I'm using Spring for DI and DAOs. Here is how I'm configuring my HSQL DataSource <bean id="mockDataSource" class="org.springframework.jdbc.datasource.SingleConnectionDataSource"> <property name="driverClassName" value="org.hsqldb.jdbcDriver"/> <property name="url" value="jdbc:hsqldb:mem:mockSeo"/> <property name="username" value="sa"/> </bean> This works fine for my JUnit tests which use the mock DB. But when I try to run a main method, I find the following error: Error creating bean with name 'mockDataSource' defined in class path resource [beans.xml]: Error setting property values; nested exception is org.springframework.beans.PropertyBatchUpdateException; nested PropertyAccessExceptions (1) are: PropertyAccessException 1: org.springframework.beans.MethodInvocationException: Property 'driverClassName' threw exception; nested exception is java.lang.IllegalStateException: Could not load JDBC driver class [org.hsqldb.jdbcDriver] I'm running from Eclipse, and I'm using the Maven plugin. Is there a reason why this would work as a Test, but not as a main()? I know that the main method itself is not the problem, because it works if I remove all references to the HSQL DataSource from my Spring Configuration file.

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• iOS 5 Audio Alarms Don't Sound Without kAudioSessionProperty_OverrideCategoryMixWithOthers On

  - by coneybeare

  I have an audio app that is having some problems with the way iOS 5 has changed audio behaviors. When my app's audio is playing (AVAudioSessionCategoryPlayback), and a Clock.app alarm or timer is fired from the OS, the UIAlertView notification pops up, but without the audio alert. My application sound ducks fine to get out of the way of the audio alert, but the alarm app's audio alert does not sound. Naturally, tons of support requests poured in over the iOS 5 change. I have solved this temporarily by setting kAudioSessionProperty_OverrideCategoryMixWithOthers which lets the alarm audio come through, but there are a few very undesirable side-effects when doing this: Other app's audio can play with/over mine. The remote control events are not routed to my app, but to iPod.app. None of the above drawbacks are acceptable for my app's requirements. I have been hacking away at this for some time now but haven't been able to crack it. How can I setup my audio such that: My app's audio still uses the AVAudioSessionCategoryPlayback category for background audio. The Clock.app alarms still have their audio alerts make sound The app still responds to remote control notifications

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• How to run an external SWF inside a Flex Application?

  - by lk

  I want to run an Action Script 3.0 Application into a Flex Application. To do this I've done the following: <?xml version="1.0" encoding="utf-8"?> <mx:WindowedApplication windowComplete="loadSwfApplication()" xmlns:mx="http://www.adobe.com/2006/mxml"> <mx:Script> <![CDATA[ private function loadSwfApplication() { var urlRequest:URLRequest = new URLRequest("path/to/the/application.swf"); swfLoader.addEventListener(Event.COMPLETE, loadComplete); swfLoader.load(urlRequest); } private function loadComplete(completeEvent:Event) { var swfApplication:* = completeEvent.target.content; swfApplication.init(); // this is a Function that I made it in the Root class of swfApplication } ]]> </mx:Script> <mx:SWFLoader id="sfwLoader"/> </mx:WindowedApplication> The problem is that in the calling of swfApplication.init(); the AIR Player throws me an exception: Security sandbox violation: caller file:///path/to/the/application.swf cannot access Stage owned by app:/SWFApplicationLoader.swf. This is because somewhere in application.swf I use the stage like this: if (root.stage != null) root.stage.addEventListener(Event.REMOVED, someFunction); root.stage.stageFocusRect = false; How can I load this swf application and USE the stage without any problems?

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• Is it possible to run my Windows Form application in Windows CE platform?

  - by Fakhrul

  I am new in Windows CE development and never done it yet. Need some advise from the expert in here. In our current project, we are developing a client-server application. The client side is using a windows form application that are base on Windows XP OS while the server is a web base application. This question are related to the client application (Windows Form). This application are using Sql Server Express Edition for data storage. The data is stored in XML object format. It also can transfer a data from client to server via web service. It also interact with hardware such as Magnetic Stripe Reader, Contactless Smart Card Reader, and a thermal printer. Most of the communication between hardware device and systems are base on Serial Port. It is use standard app.config for the configuration and is a multi threaded application. There is a new requirement to use a Handheld device which is use a Windows CE platform. This handheld included the required equipment such as Contactless Smart Card Reader, Printer and Magnetic Stripe Reader. Instead of developing a new client application, is it possible to me to convert my current application that are base on Windows XP to Windows CE? If yes, how can I do that? If no, is it any other brilliant suggestion to do this? Thanks in advance. Software Engineer

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• I'v installed NetBeans 6.8 on my MacOS X MacBook and the logs say it cannot be run, any ideas?

  - by codezealot

  I've installed NetBeans 6.8 on my MacBook, and the installation results indicated success. However, every single time I attempt to run the application is shuts down. I monitored the process and noticed the following entries in the console that imply the application cannot be found? 3/19/10 10:20:20 PM [0x0-0x22022].org.netbeans.ide.baseide.200912041610[22168] /Applications/NetBeans/NetBeans 6.8.app/Contents/MacOS/netbeans: line 57: dirname: command not found 3/19/10 10:20:20 PM [0x0-0x22022].org.netbeans.ide.baseide.200912041610[22168] Cannot read cluster file: /../etc/netbeans.clusters 3/19/10 10:20:20 PM com.apple.launchd.peruser.501[77] ([0x0-0x22022].org.netbeans.ide.baseide.200912041610[22168]) Exited with exit code: 1 I started researching how to set the default JDK for use by NetBeans, and found repeated use of the following command line entry; netbeans --jdkhome /System/Library/Frameworks/JavaVM.framework/Versions/1.6.0/Home -- from http://wiki.netbeans.org/JDKVersionAndMacOS When I attempt the command line above, I receive "netbeans command not found". So do I ... 1.) Need to create a command called "netbeans" that points to my install location for NetBeans 6.8? If so how do I do that? 2.) How do I get to the netbeans.conf file for NetBeans 6.8, does one even exist for it? It gets even more interesting, the above happens with Eclipse as well. Yippie.

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• How to configure SQLite to run with NHibernate where assembly resolves System.Data.SQLite?

  - by Michael Hedgpeth

  I am using the latest NHibernate 2.1.0Beta2. I'm trying to unit test with SQLite and have the configuration set up as: Dictionary<string, string> properties = new Dictionary<string, string>(); properties.Add("connection.driver_class", "NHibernate.Driver.SQLite20Driver"); properties.Add("dialect", "NHibernate.Dialect.SQLiteDialect"); properties.Add("connection.provider", "NHibernate.Connection.DriverConnectionProvider"); properties.Add("query.substitutions", "true=1;false=0"); properties.Add("connection.connection_string", "Data Source=test.db;Version=3;New=True;"); properties.Add("proxyfactory.factory_class", "NHibernate.ByteCode.LinFu.ProxyFactoryFactory, NHibernate.ByteCode.LinFu"); configuration = new Configuration(); configuration.SetProperties(properties); When I try to run it, I get the following error: NHibernate.HibernateException: The IDbCommand and IDbConnection implementation in the assembly System.Data.SQLite could not be found. Ensure that the assembly System.Data.SQLite is located in the application directory or in the Global Assembly Cache. If the assembly is in the GAC, use <qualifyAssembly/> element in the application configuration file to specify the full name of the assembly. at NHibernate.Driver.ReflectionBasedDriver..ctor(String driverAssemblyName, String connectionTypeName, String commandTypeName) in c:\CSharp\NH\nhibernate\src\NHibernate\Driver\ReflectionBasedDriver.cs: line 26 at NHibernate.Driver.SQLite20Driver..ctor() in c:\CSharp\NH\nhibernate\src\NHibernate\Driver\SQLite20Driver.cs: line 28 So it looks like I need to reference the assembly directly. How would I do this so I don't get this error anymore? I downloaded the latest assembly from here: http://sourceforge.net/projects/sqlite-dotnet2.

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• When i run rake db:create ,Error rake aborted! uninitialized constant Cucumber

  - by Big Bang Theory

  Hi I am trying to experiment on an open source application application . when i run $ rake db:create Following is the stacktrace rake aborted! uninitialized constant Cucumber /usr/lib/ruby/gems/1.8/gems/activesupport-2.3.2/lib/active_support/dependencies.rb:443:in `load_missing_constant' /usr/lib/ruby/gems/1.8/gems/activesupport-2.3.2/lib/active_support/dependencies.rb:80:in `const_missing' /usr/lib/ruby/gems/1.8/gems/activesupport-2.3.2/lib/active_support/dependencies.rb:92:in `const_missing' /home/BigBangTheory/Desktop/spot-us/lib/tasks/cucumber.rake:13 /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:1882:in `in_namespace' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:910:in `namespace' /home/BigBangTheory/Desktop/spot-us/lib/tasks/cucumber.rake:12 /usr/lib/ruby/gems/1.8/gems/activesupport-2.3.2/lib/active_support/dependencies.rb:145:in `load_without_new_constant_marking' /usr/lib/ruby/gems/1.8/gems/activesupport-2.3.2/lib/active_support/dependencies.rb:145:in `load' /usr/lib/ruby/gems/1.8/gems/activesupport-2.3.2/lib/active_support/dependencies.rb:521:in `new_constants_in' /usr/lib/ruby/gems/1.8/gems/activesupport-2.3.2/lib/active_support/dependencies.rb:145:in `load' /usr/lib/ruby/gems/1.8/gems/rails-2.3.2/lib/tasks/rails.rb:8 /usr/lib/ruby/gems/1.8/gems/rails-2.3.2/lib/tasks/rails.rb:8:in `each' /usr/lib/ruby/gems/1.8/gems/rails-2.3.2/lib/tasks/rails.rb:8 /usr/local/lib/site_ruby/1.8/rubygems/custom_require.rb:31:in `gem_original_require' /usr/local/lib/site_ruby/1.8/rubygems/custom_require.rb:31:in `require' /home/BigBangTheory/Desktop/spot-us/Rakefile:9 /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:2383:in `load' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:2383:in `raw_load_rakefile' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:2017:in `load_rakefile' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:2068:in `standard_exception_handling' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:2016:in `load_rakefile' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:2000:in `run' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:2068:in `standard_exception_handling' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/lib/rake.rb:1998:in `run' /usr/lib/ruby/gems/1.8/gems/rake-0.8.7/bin/rake:31 /usr/bin/rake:19:in `load' /usr/bin/rake:19 Any help ?

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• Cannot run Python script on Windows with output redirected??

  - by Wai Yip Tung

  This is running on Windows 7 (64 bit), Python 2.6 with Win32 Extensions for Python. I have a simple script that just print "hello world". I can launch it with python hello.py. In this case I can redirect the output to a file. But if I run it by just typing hello.py on the command line and redirect the output, I get an exception. C:> python hello.py hello world C:> python hello.py >output C:> type output hello world C:> hello.py hello world C:> hello.py >output close failed in file object destructor: Error in sys.excepthook: Original exception was: I think I first get this error after upgrading to Windows 7. I remember it should work in XP. I have seen people talking about this bug python-Bugs-1012692 | Can't pipe input to a python program. But that was long time ago. And it does not mention any solution. Have anyone experienced this? Anyone can help?

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• After travelling back in Firefox history, javascript won't run.

  - by Patonza

  When I use the back button on Firefox to reach a previously visited page, scripts on that page won't run again. Is there any fix/workaround to have the scripts execute again when viewing the page the second time? Please note that I have tested the same pages on Google Chrome and Internet Explorer and they work as intended. Here are the files and the steps I used to test the problem: (navigate to 0.html, click to get to 1.html, back button) 0.html <html><body> <script type="text/javascript"> window.onload = function() { alert('window.onload alert'); }; alert('inline alert'); </script> <a href="1.html">Click Me!</a> </body></html> 1.html <html><body> <p>Go BACK!</p> </body></html>

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• How to install a desktop shortcut (to a batch file) from a WiX-based installer that has "Run as Admi

  - by arathorn

  I'm installing a desktop shortcut (to a batch file) from a WiX-based installer -- how do I automatically configure this shortcut with the "Run as Administrator" setting enabled? The target OS is Windows Server 2008 R2, and the installer is running with elevated priveleges. Update: Thanks to the link provided by @Anders, I was able to get this working. I needed to do this in a C# CustomAction, so here is the C# version of the code: namespace CustomAction1 { public class CustomAction1 { public bool MakeShortcutElevated(string file_) { if (!System.IO.File.Exists(file_)) { return false; } IPersistFile pf = new ShellLink() as IPersistFile; if (pf == null) { return false; } pf.Load(file_, 2 /* STGM_READWRITE */); IShellLinkDataList sldl = pf as IShellLinkDataList; if (sldl == null) { return false; } uint dwFlags; sldl.GetFlags(out dwFlags); sldl.SetFlags(dwFlags | 0x00002000 /* SLDF_RUNAS_USER */); pf.Save(null, true); return true; } } [ComImport(), Guid("00021401-0000-0000-C000-000000000046")] public class ShellLink { } [ComImport(), InterfaceType(ComInterfaceType.InterfaceIsIUnknown), Guid("45e2b4ae-b1c3-11d0-b92f-00a0c90312e1")] interface IShellLinkDataList { void GetFlags(out uint pdwFlags); void SetFlags(uint dwFlags); } }

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• IBM Worklight v6.1.0.1 : Error when using Ionic Framework with Worklight and run on IOS environment

  - by NickNguyen

  I have created demo app using Ionic with Worklight and it worked on Android but got error on IOS, when i used mobile browser simulator and debugged on IOS environment, i got the folowing error message: Uncaught InvalidCharacterError: Failed to execute 'add' on 'DOMTokenList': The token provided ('platform-ios - iphone') contains HTML space characters, which are not valid in tokens. I just add Ionic files in index.html: <!DOCTYPE HTML> <html> <head> <meta charset="UTF-8"> <title>index</title> <meta name="viewport" content="width=device-width, initial-scale=1.0, maximum-scale=1.0, minimum-scale=1.0, user-scalable=0"> <link rel="shortcut icon" href="images/favicon.png"> <link rel="apple-touch-icon" href="images/apple-touch-icon.png"> <link rel="stylesheet" href="css/main.css"> <link rel="stylesheet" href="ionic/css/ionic.css"> <script src="ionic/js/ionic.bundle.js"></script> </head> <body style="display: none;"> <!--application UI goes here--> <div class="bar bar-header bar-positive"> <h1 class="title">bar-positive</h1> </div> <script src="js/initOptions.js"></script> <script src="js/main.js"></script> <script src="js/messages.js"></script> </body> </html> I also tested on mobile device on both Android and IOS and only got error on IOS device. I don't know how to fix this. Can anyone help? Thanks.

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• Why can't I run a Perl program from TextMate?

  - by JZ

  I'm following a bioinformatics text, and this represents one of my first Perl scripts. While in TextMate, this does not produce any result. Is it functioning? I added "hello world" at the bottom and I don't see that when I run the script in TextMate. What have I done wrong? #!/usr/local/bin/perl -w use lib "/Users/fogonthedowns/myperllib"; use LWP::Simple; use strict; #Set base URL for all eutils my $utils = "http://eutils.ncbi.nlm.nih.gov/entrez/eutils"; my $db = "Pubmed"; my $query ="Cancer+Prostate"; my $retmax = 10; my $esearch = "$utils/esearch.fcgi?" . "db=$db&retmax=$retmax&term="; my $esearch_result = get($esearch.$query); print "ESEARCH RESULT: $esearch_result\n"; print "Using Query: \n$esearch$query\n"; print "hello world\n";

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• C# : Forcing a clean run in a long running SQL reader loop?

  - by Wardy

  I have a SQL data reader that reads 2 columns from a sql db table. once it has done its bit it then starts again selecting another 2 columns. I would pull the whole lot in one go but that presents a whole other set of challenges. My problem is that the table contains a large amount of data (some 3 million rows or so) which makes working with the entire set a bit of a problem. I'm trying to validate the field values so i'm pulling the ID column then one of the other cols and running each value in the column through a validation pipeline where the results are stored in another database. My problem is that when the reader hits the end of handlin one column I need to force it to immediately clean up every little block of ram used as this process uses about 700MB and it has about 200 columns to go through. Without a full Garbage Collect I will definately run out of ram. Anyone got any ideas how I can do this? I'm using lots of small reusable objects, my thought was that I could just call GC.Collect() on the end of each read cycle and that would flush everything out, unfortunately that isn't happening for some reason.

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• Sweave can't see a vector if run from a function ?

  - by PaulHurleyuk

  I have a function that sets a vector to a string, copies a Sweave document with a new name and then runs that Sweave. Inside the Sweave document I want to use the vector I set in the function, but it doesn't seem to see it. (Edit: I changed this function to use tempdir(() as suggested by Dirk) I created a sweave file test_sweave.rnw; % \documentclass[a4paper]{article} \usepackage[OT1]{fontenc} \usepackage{Sweave} \begin{document} \title{Test Sweave Document} \author{gb02413} \maketitle <<>>= ls() Sys.time() print(paste("The chosen study was ",chstud,sep="")) @ \end{document} and I have this function; onOK <- function(){ chstud<-"test" message(paste("Chosen Study is ",chstud,sep="")) newfile<-paste(chstud,"_report",sep="") mypath<-paste(tempdir(),"\\",sep="") setwd(mypath) message(paste("Copying test_sweave.Rnw to ",paste(mypath,newfile,".Rnw",sep=""),sep="")) file.copy("c:\\local\\test_sweave.Rnw", paste(mypath,newfile,".Rnw",sep=""), overwrite=TRUE) Sweave(paste(mypath,newfile,".Rnw",sep="")) require(tools) texi2dvi(file = paste(mypath,newfile,".tex",sep=""), pdf = TRUE) } If I run the code from the function directly, the resulting file has this output for ls(); > ls() [1] "chstud" "mypath" "newfile" "onOK" However If I call onOK() I get this output; > ls() [1] "onOK" and the print(...chstud...)) function generates an error. I suspect this is an environment problem, but I assumed because the call to Sweave occurs within the onOK function, it would be in the same enviroment, and would see all the objects created within the function. How can I get the Sweave process to see the chstud vector ? Thanks Paul.

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• How can I run Ruby specs and/or tests in MacVim without locking up MacVim?

  - by Henry

  About 6 months ago I switched from TextMate to MacVim for all of my development work, which primarily consists of coding in Ruby, Ruby on Rails and JavaScript. With TextMate, whenever I needed to run a spec or a test, I could just command+R on the test or spec file and another window would open and the results would be displayed with the 'pretty' format applied. If the spec or test was a lengthy one, I could just continue working with the codebase since the test/spec was running in a separate process/window. After the test ran, I could click through the results directly to the corresponding line in the spec file. Tim Pope's excellent rails.vim plugin comes very close to emulating this behavior within the MacVim environment. Running :Rake when the current buffer is a test or spec runs the file then splits the buffer to display the results. You can navigate through the results and key through to the corresponding spot in the file. The problem with the rails.vim approach is that it locks up the MacVim window while the test runs. This can be an issue with big apps that might have a lot of setup/teardown built into the tests. Also, the visual red/green html results that TextMate displays (via --format pretty, I'm assuming) is a bit easier to scan than the split window. This guy came close about 18 mos ago: http://cassiomarques.wordpress.com/2009/01/09/running-rspec-files-from-vim-showing-the-results-in-firefox/ The script he has worked with a bit of hacking, but the tests still ran within MacVim and locked up the current window. Any ideas on how to fully replicate the TextMate behavior described above in MacVim? Thanks!

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• Firefox extension: How to inject javascript into page and run it?

  - by el griz

  I'm writing a Firefox extension to allow users to annotate any page with text and/or drawings and then save an image of the page including the annotations. Use cases would be clients reviewing web pages, adding feedback to the page, saving the image of this and emailing it back to the web developer or testers taking annotated screenshots of GUI bugs etc. I wrote the annotation/drawing functionality in javascript before developing the extension. This script adds a <canvas> element to the page to draw upon as well as a toolbar (in a <div>) that contains buttons (each <canvas> elements) for the different draw tools e.g. line, box, ellipse, text, etc. This works fine when manually included in a page. I now need a way for the extension to: Inject this script into any page including pages I don't control. This needs to occur when the user invokes the extension, which can be after the page has loaded. Once injected the init() function in this script that adds the canvas and toolbar elements etc. needs to be run somehow, but I can't determine how to call this from the extension. Note that once injected I don't need this script to interact with the extension (as the extension just takes a screenshot of the entire document (and removes the added page elements) when the user presses the save button in the extension chrome).

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• VS 2008 debugger: How does it decide what Cassini port to run a web service under?

  - by BDW

  I have a VS 2008 solution that includes a web site and a web service. I'm developing both at once, and it's helpful to be able to debug from one into the other. It occasionally can't find the web service. If I look in the web.config, I find the port number it's looking at is not the port number it auto-runs the service in when I use the debugger. For example, the web.config reference says something like: add key="mynamespace.mywebservice" value="http://localhost:55765/mywebservice.asmx" When I hover over the Cassini port icon, I find that the web service is running in port 55382 (or some other non-55765 port). No wonder it can't find it. Is there a way to enforce that the port number it runs under is the one specified in the web config? And if it's not using the web config port number to figure out where to run it... where does it decide? I know in VS2005, there was a way to specify the port number to use when debugging, but I can't find that anywhere in the web service project in VS 2008. This is really going to cause problems as more developers come on to this project - how can I fix it? Deleting and re-adding the web services to the project fixes it, but I'd literally have to do it a couple times a day, not an ideal solution.

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• Run arbitrary subprocesses on Windows and still terminate cleanly?

  - by Weeble

  I have an application A that I would like to be able to invoke arbitrary other processes as specified by a user in a configuration file. Batch script B is one such process a user would like to be invoked by A. B sets up some environment variables, shows some messages and invokes a compiler C to do some work. Does Windows provide a standard way for arbitrary processes to be terminated cleanly? Suppose A is run in a console and receives a CTRL+C. Can it pass this on to B and C? Suppose A runs in a window and the user tries to close the window, can it cancel B and C? TerminateProcess is an option, but not a very good one. If A uses TerminateProcess on B, C keeps running. This could cause nasty problems if C is long-running, since we might start another instance of C to operate on the same files while the first instance of C is still secretly at work. In addition, TerminateProcess doesn't result in a clean exit. GenerateConsoleCtrlEvent sounds nice, and might work when everything's running in a console, but the documentation says that you can only send CTRL+C to your own console, and so wouldn't help if A were running in a window. Is there any equivalent to SIGINT on Windows? I would love to find an article like this one: http://www.cons.org/cracauer/sigint.html for Windows.

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• Why is alert not run even though $.getJSON runs fine? (Callback not executed, even though the reques

  - by Emre Sevinç

  I have a snippet of code such as: $.getJSON("http://mysite.org/polls/saveLanguageTest?url=" + escape(window.location.href) + "&callback=?", function (data) { var serverResponse = data.result; console.log(serverResponse); alert(serverResponse); }); It works fine in the sense that it makes a cross-domain request to my server and the server saves the data as I expect. Unfortunately, even though the server saves data and sends back a response I just can't get any alert or the console.log run. Why may be that? The server side code is (if that is relevant): def saveLanguageTest(request): callback = request.GET.get('callback', '') person = Person(firstName = 'Anonymous', ipAddress = request.META['REMOTE_ADDR']) person.save() webPage = WebPage(url = request.GET.get('url')) webPage.save() langTest = LanguageTest(type = 'prepositionTest') langTest.person = person langTest.webPage = webPage langTest.save() req ['result'] = 'Your test is saved.' response = json.dumps(req) response = callback + '(' + response + ');' return HttpResponse(response, mimetype = "application/json") What am I missing? (I tried the same code both within my web pages and inside the Firebug and I always have the problem stated above.)

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