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  • argparse coding issue

    - by Carl Skonieczny
    write a script that takes two optional boolean arguments,"--verbose‚" and ‚"--live", and two required string arguments, "base"and "pattern". Please set up the command line processing using argparse. This is the code I have so far for the question, I know I am getting close but something is not quite right. Any help is much appreciated.Thanks for all the quick useful feedback. def main(): import argparse parser = argparse.ArgumentParser(description='') parser.add_argument('base', type=str) parser.add_arguemnt('--verbose', action='store_true') parser.add_argument('pattern', type=str) parser.add_arguemnt('--live', action='store_true') args = parser.parse_args() print(args.base(args.pattern))

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  • Writing csv header removes data from numpy array written below

    - by user338095
    I'm trying to export data to a csv file. It should contain a header (from datastack) and restacked arrays with my data (from datastack). One line in datastack has the same length as dataset. The code below works but it removes parts of the first line from datastack. Any ideas why that could be? s = ','.join(itertools.chain(dataset)) + '\n' newfile = 'export.csv' f = open(newfile,'w') f.write(s) numpy.savetxt(newfile, (numpy.transpose(datastack)), delimiter=', ') f.close()

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  • Problem with sys.argv[1] when unittest module is in a script

    - by chrissygormley
    Hello, I have a script that does various things and access paramenters using sys.argv but when the script gets to the unittest part of the code it says there is no module for this. The script that I have is: class MyScript(): def __init__(self): self.value = sys.argv[1] def hello(self): print self.value def suite(self): modules_to_test = ('external_sanity_onvif', 'starttest') alltests = unittest.TestSuite() for module in map(__import__, modules_to_test): alltests.addTest(unittest.findTestCases(module)) return alltests if __name__ == '__main__': Run = MyScript() Run.hello() log_file = 'log_file.txt' test_file = open(log_file, "w") runner = unittest.TextTestRunner(test_file) unittest.main(defaultTest='Run.suite', testRunner=runner) Say I enter ./script.py Hello in the command line. The error I get is: AttributeError: 'module' object has no attribute 'Hello' If I remove the unittest module it works. Also if I remove the testrunner log and leave it at: unittest.main(defaultTest='Run.suite') This still doesn't work. Can anyone help. Thanks

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  • Pickling a class definition

    - by Giorgio
    Is there a way to pickle a class definition? What I'd like to do is pickle the definition (which may created dynamically), and then send it over a TCP connection so that an instance can be created on the other end. I understand that there may be dependencies, like modules and global variables that the class relies on. I'd like to bundle these in the pickling process as well, but I'm not concerned about automatically detecting the dependencies because it's okay if the onus is on the user to specify them.

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  • SQLAlchemy sessions - DetachedInstanceError?

    - by benjaminhkaiser
    I have a function that attempts to take a list of usernames, look each one up in a user table, and then add them to a membership table. If even one username is invalid, I want the entire list to be rolled back, including any users that have already been processed. I thought that using sessions was the best way to do this but I'm running into a DetachedInstanceError: DetachedInstanceError: Instance <Organization at 0x7fc35cb5df90> is not bound to a Session; attribute refresh operation cannot proceed Full stack trace is here. The error seems to trigger when I attempt to access the user (model) object that is returned by the query. From my reading I understand that it has something to do with there being multiple sessions, but none of the suggestions I saw on other threads worked for me. Code is below: def add_members_in_bulk(organization_eid, users): """Add users to an organization in bulk - helper function for add_member()""" """Returns "success" on success and id of first failed student on failure""" session = query_session.get_session() session.begin_nested() users = users.split('\n') for u in users: try: user = user_lookup.by_student_id(u) except ObjectNotFoundError: session.rollback() return u if user: membership.add_user_to_organization( user.entity_id, organization_eid, '', [] ) session.flush() session.commit() return 'success' here's the membership.add_user_to_organization: def add_user_to_organization(user_eid, organization_eid, title, tag_ids): """Add a User to an Organization with the given title""" user = user_lookup.by_eid(user_eid) organization = organization_lookup.by_eid(organization_eid) new_membership = OrganizationMembership( organization_eid=organization.entity_id, user_eid=user.entity_id, title=title) new_membership.tags = [get_tag_by_id(tag_id) for tag_id in tag_ids] crud.add(new_membership) and here is the lookup by ID query: def by_student_id(student_id, include_disabled=False): """Get User by RIN""" try: return get_query_set(include_disabled).filter(User.student_id == student_id).one() except NoResultFound: raise ObjectNotFoundError("User with RIN %s does not exist." % student_id)

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  • Unable to plot graph using matplotlib

    - by Aman Deep Gautam
    I have the following code which searches all the directory in the current directory and then takes data from those files to plot the graph. The data is read correctly as verified by printing but there are no points plotted on graph. import argparse import os import matplotlib.pyplot as plt #find the present working directory pwd=os.path.dirname(os.path.abspath(__file__)) #find all the folders in the present working directory. dirs = [f for f in os.listdir('.') if os.path.isdir(f)] plt.figure() plt.xlim(0, 20000) plt.ylim(0, 1) for directory in dirs: os.chdir(os.path.join(pwd, directory)); chd_dir = os.path.dirname(os.path.abspath(__file__)) files = [ fl for fl in os.listdir('.') if os.path.isfile(fl) ] print files for f in files: f_obj = open(os.path.join(chd_dir, f), 'r') list_x = [] list_y = [] for i in xrange(0,4): f_obj.next() for line in f_obj: temp_list = line.split() print temp_list list_y.append(temp_list[0]) list_x.append(temp_list[1]) print 'final_lsit' print list_x print list_y plt.plot(list_x, list_y, 'r.') f_obj.close() os.chdir(pwd) plt.savefig("test.jpg") The input files look like the following: 5 865 14709 15573 14709 1.32667e-06 664 0.815601 14719 1.55333e-06 674 0.813277 14729 1.82667e-06 684 0.810185 14739 1.4e-06 694 0.808459 Can anybody help me with why this is happening? Being new I would like to know some tutorial where I can get help with kind of plotting as the tutorial I was following made me end up here. Any help appreciated.

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  • Sending message from one server to another in Twisted

    - by Casey Patton
    I've implemented my servers in the following way: def makeServer(application, port): factory = protocol.ServerFactory() factory.protocol = MyChat factory.clients = [] internet.TCPServer(port, factory).setServiceParent(application) application = service.Application("chatserver") server1 = makeServer(application, port=1025) server2 = makeServer(application, port=1026) server3 = makeServer(application, port=1027) Note that MyChat is an event handling class that has a "receiveMessage" action: def lineReceived(self, line): print "received", repr(line) for c in self.factory.clients: c.transport.write(message + '\n') I want server1 to be able to pass messages to server2. Rather, I want server1 to be treated as a client of server2. If server1 receives the message "hi" then I want it to send that same exact message to server2. How can I accomplish this?

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  • Wordpress & Django -- One domain, two servers. Possible?

    - by DomoDomo
    My question is about hosting Django and Wordpress under one domain, but two physical machines (actually, they are VMs but same diff). Let's say I have a Django webapp at example.com. I'd like to start a Wordpress blog about my webapp, so any blog page rank mojo flows back to my webapp, I'd like the blog address t be example.com/blog. My understanding is blog.example.com would not transfer said page rank mojo. Because I'm worried about Wordpress security flaws compromising my Django webapp, I want to host Django and Wordpress on two physically separate machines. Given all that, is it possible using re-write rules or a reverse proxy server to do this? I know the easy way is to make my Wordpress blog a subdomain, but I really don't want to do that. Has anyone done this in the past, is it stable? If I need a third server to be a dedicated reverse proxy, that's totally fine. Thanks!

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  • Simple numpy question

    - by dassouki
    I can't get this snippet to work: #base code A = array([ [ 1, 2, 10 ], [ 1, 3, 20 ], [ 1, 4, 30 ], [ 2, 1, 15 ], [ 2, 3, 25 ], [ 2, 4, 35 ], [ 3, 1, 17 ], [ 3, 2, 27 ], [ 3, 4, 37 ], [ 4, 1, 13 ], [ 4, 2, 23 ], [ 4, 3, 33 ] ]) # Number of zones zones = unique1d(A[:,0]) for origin in zones: for destination in zones: if origin != destination: A_ik = A[(A[:,0] == origin & A[:,1] == destination), 2]

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  • Update Facebook Page's status using pyfacebook

    - by thornomad
    I am attempting to add functionality to my Django app: when a new post is approved, I want to update the corresponding Facebook Page's status with a message and a link to the post automatically. Basic status update. I have downloaded and installed pyfacebook - and I have read through the tutorial from Facebook. I have also seen this suggestion here on SO: import facebook fb = facebook.Facebook('YOUR_API_KEY', 'YOUR_SECRET_KEY') fb.auth.createToken() fb.login() # THIS IS AS FAR AS I CAN GET fb.auth.getSession() fb.set_status('Checking out StackOverFlow.com') When I get to the login() call, however, pyfacebook tries to open lynx so I can login to Facebook 'via the web' -- this is, obviously, not going to work for me because the system is supposed to be automated ... I've been looking, but can't find out how I can keep this all working with the script and not having to login via a web browser. Any ideas?

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  • Can anyone tell me why these lines are not working?

    - by user343934
    I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO_init_.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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  • Return 0 where django quersyet is none

    - by gramware
    I have a django queryset in my views whose values I pack before passing to my template. There is a problem when the queryset returns none since associated values are not unpacked. the quersyet is called comments. Here is my views.py def forums(request ): post_list = list(forum.objects.filter(child='0')&forum.objects.filter(deleted='0').order_by('postDate')) user = UserProfile.objects.get(pk=request.session['_auth_user_id']) newpostform = PostForm(request.POST) deletepostform = PostDeleteForm(request.POST) DelPostFormSet = modelformset_factory(forum, exclude=('child','postSubject','postBody','postPoster','postDate','childParentId')) readform = ReadForumForm(request.POST) comments =list( forum.objects.filter(deleted='0').filter(child='1').order_by('childParentId').values('childParentId').annotate(y=Count('childParentId'))) if request.user.is_staff== True : staff = 1 else: staff = 0 staffis = 1 if newpostform.is_valid(): topic = request.POST['postSubject'] poster = request.POST['postPoster'] newpostform.save() return HttpResponseRedirect('/forums') else: newpostform = PostForm(initial = {'postPoster':user.id}) if request.GET: form = SearchForm(request.GET) if form.is_valid(): query = form.cleaned_data['query'] post_list = list((forum.objects.filter(child='0')&forum.objects.filter(deleted='0')&forum.objects.filter(Q(postSubject__icontains=query)|Q(postBody__icontains=query)|Q(postDate__icontains=query)))or(forum.objects.filter(deleted='0')&forum.objects.filter(Q(postSubject__icontains=query)|Q(postBody__icontains=query)|Q(postDate__icontains=query)).values('childParentId'))) if request.method == 'POST': delpostformset = DelPostFormSet(request.POST) if delpostformset.is_valid(): delpostformset.save() return HttpResponseRedirect('/forums') else: delpostformset = DelPostFormSet(queryset=forum.objects.filter(child='0', deleted='0')) """if readform.is_valid(): user=get_object_or_404(UserProfile.objects.all()) readform.save() else: readform = ReadForumForm()""" post= zip( post_list,comments, delpostformset.forms) paginator = Paginator(post, 10) # Show 10 contacts per page # Make sure page request is an int. If not, deliver first page. try: page = int(request.GET.get('page', '1')) except ValueError: page = 1 # If page request (9999) is out of range, deliver last page of results. try: post = paginator.page(page) except (EmptyPage, InvalidPage): post = paginator.page(paginator.num_pages) return render_to_response('forum.html', {'post':post, 'newpostform': newpostform,'delpost':delpostformset, 'username':user.username, 'comments':comments, 'user':user, },context_instance = RequestContext( request ))

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  • Django paging object has issues with Postgresql QuerySets

    - by pivotal
    I have some django code that runs fine on a SQLite database or on a MySQL database, but it runs into problems with Postgres, and it's making me crazy that no one has has this issue before. I think it may also be related to the way querysets are evaluated by the pager. In a view I have: def index(request, page=1): latest_posts = Post.objects.all().order_by('-pub_date') paginator = Paginator(latest_posts, 5) try: posts = paginator.page(page) except (EmptyPage, InvalidPage): posts = paginator.page(paginator.num_pages) return render_to_response('blog/index.html', {'posts' : posts}) And inside the template: {% for post in posts.object_list %} {# some rendering jazz #} {% endfor %} This works fine with SQLite, but Postgres gives me: Caught TypeError while rendering: 'NoneType' object is not callable To further complicate things, when I switch the Queryset call to: latest_posts = Post.objects.all() Everything works great. I've tried re-reading the documentation, but found nothing, although I admit I'm a bit clouded by frustration at this point. What am I missing? Thanks in advance.

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  • PyQt QAbstractListModel seems to ignore tristate flags

    - by mcieslak
    I've been trying for a couple days to figure out why my QAbstractLisModel won't allow a user to toggle a checkable item in three states. The model returns the Qt.IsTristate and Qt.ItemIsUserCheckable in the flags() method, but when the program runs only Qt.Checked and Qt.Unchecked are toggled on edit. class cboxModel(QtCore.QAbstractListModel): def __init__(self, parent=None): super(cboxModel, self).__init__(parent) self.cboxes = [ ['a',0], ['b',1], ['c',2], ['d',0] ] def rowCount(self,index=QtCore.QModelIndex()): return len(self.cboxes) def data(self,index,role): if not index.isValid: return QtCore.QVariant() myname,mystate = self.cboxes[index.row()] if role == QtCore.Qt.DisplayRole: return QtCore.QVariant(myname) if role == QtCore.Qt.CheckStateRole: if mystate == 0: return QtCore.QVariant(QtCore.Qt.Unchecked) elif mystate == 1: return QtCore.QVariant(QtCore.Qt.PartiallyChecked) elif mystate == 2: return QtCore.QVariant(QtCore.Qt.Checked) return QtCore.QVariant() def setData(self,index,value,role=QtCore.Qt.EditRole): if index.isValid(): self.cboxes[index.row()][1] = value.toInt()[0] self.emit(QtCore.SIGNAL("dataChanged(QModelIndex,QModelIndex)"), index, index) print self.cboxes return True return False def flags(self,index): if not index.isValid(): return QtCore.Qt.ItemIsEditable return QtCore.Qt.ItemIsEnabled | QtCore.Qt.ItemIsEditable | QtCore.Qt.ItemIsUserCheckable | QtCore.Qt.ItemIsTristate You can test it with this, class MainForm(QtGui.QMainWindow): def __init__(self, parent=None): super(MainForm, self).__init__(parent) model = cboxModel(self) self.view = QtGui.QListView() self.view.setModel(model) self.setCentralWidget(self.view) app = QtGui.QApplication(sys.argv) form = MainForm() form.show() app.exec_() and see that only 2 states are available. I'm assuming there's something simple I'm missing. Any ideas? Thanks!

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  • Django: Update order attribute for objects in a queryset

    - by lazerscience
    I'm having a attribute on my model to allow the user to order the objects. I have to update the element's order depending on a list, that contains the object's ids in the new order; right now I'm iterating over the whole queryset and set one objects after the other. What would be the easiest/fastest way to do the same with the whole queryset? def update_ordering(model, order): """ order is in the form [id,id,id,id] for example: [8,4,5,1,3] """ id_to_order = dict((order[i], i) for i in range(len(order))) for x in model.objects.all(): x.order = id_to_order[x.id] x.save()

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  • Append to list of lists

    - by Joel
    Hello, I am trying to build a list of lists using the following code: list=3*[[]] Now I am trying to append a string to the list in position 0: list[0].append("hello") However, instead of receiving the list [ ["hello"] , [], [] ] I am receiving the list: [ ["hello"] ,["hello"] , ["hello"] ] Am I missing something? Thanks, Joel

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  • Linux distro name parsing

    - by Ockonal
    Hello, I chose this way to get linux distro name: ls /etc/*release And now I have to parse it for name: /etc/<name>-release def checkDistro(): p = Popen('ls /etc/*release' , shell = True, stdout = PIPE) distroRelease = p.stdout.read() distroName = re.search( ur"\/etc\/(.*)\-release", distroRelease).group() print distroName But this prints the same string that is in distroRelease.

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  • Query for model by key

    - by Jason Hall
    What I'm trying to do is query the datastore for a model where the key is not the key of an object I already have. Here's some code: class User(db.Model): partner = db.SelfReferenceProperty() def text_message(self, msg): user = User.get_or_insert(msg.sender) if not user.partner: # user doesn't have a partner, find them one # BUG: this line returns 'user' himself... :( other = db.Query(User).filter('partner =', None).get() if other: # connect users else: # no one to connect to! The idea is to find another User who doesn't have a partner, that isn't the User we already know. I've tried filter('key !=, user.key()), filter('__key__ !=, user.key()) and a couple others, and nothing returns another User who doesn't have a partner. filter('foo !=, user.key()) also returns nothing, for the record.

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  • how to detect escape characters in a string

    - by mix
    Given a string named line whose raw version has this value: \rRAWSTRING how can I detect if it has the escape character \r? What I've tried is: if repr(line).startswith('\r'): blah... but it doesn't catch it. I also tried find, such as: if repr(line).find('\r') != -1: blah doesn't work either. What am I missing? thx!

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  • Function for averages of tuples in a dictionary

    - by Billy Mann
    I have a string, dictionary in the form: ('the head', {'exploded': (3.5, 1.0), 'the': (5.0, 1.0), "puppy's": (9.0, 1.0), 'head': (6.0, 1.0)}) Each parentheses is a tuple which corresponds to (score, standard deviation). I'm taking the average of just the first integer in each tuple. I've tried this: def score(string, d): for word in d: (score, std) = d[word] d[word]=float(score),float(std) if word in string: word = string.lower() number = len(string) return sum([v[0] for v in d.values()]) / float(len(d)) if len(string) == 0: return 0 When I run: print score('the head', {'exploded': (3.5, 1.0), 'the': (5.0, 1.0), "puppy's": (9.0, 1.0), 'head': (6.0, 1.0)}) I should get 5.5 but instead I'm getting 5.875. Can't figure out what in my function is not allowing me to get the correct answer.

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  • Creating a Group of Groups in Django

    - by Greg
    I'm creating my own Group model; I'm not referring to the builtin Group model. I want each hroup to be a member of another group (it's parent), but there is the one "top" group that doesn't have a parent group. The admin interface won't let me create a group without entering a parent. I get the error personnel_group.parent_id may not be NULL. My Group model looks like this: class Group(models.Model): name = models.CharField(max_length=50) parent = models.ForeignKey('self', blank=True, null=True) order = models.IntegerField() icon = models.ImageField(upload_to='groups', blank=True, null=True) description = models.TextField(blank=True, null=True) How can I accomplish this? Thanks.

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  • Character Sets explained for Dummies!

    - by Imran
    I don't think i fully understand character sets so i was wondering if anyone would be kind enough to explain it in layman's terms with examples ( for Dummies).I know there is utf8, latin1, ascii ect The more answers the better really. Thank you in advance;-)

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