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  • Struts2 Tiles in Google app engine

    - by user365941
    I am trying to build an java web application using struts2 and tiles in Google App Engine. Below is my tiles.xml file <!DOCTYPE tiles-definitions PUBLIC "-//Apache Software Foundation//DTD Tiles Configuration 2.0//EN" "http://tiles.apache.org/dtds/tiles-config_2_0.dtd"> <tiles-definitions> <definition name="baseLayout" template="BaseLayout.jsp"> <put-attribute name="title" value="" /> <put-attribute name="header" value="Header.jsp" /> <put-attribute name="body" value="" /> <put-attribute name="footer" value="Footer.jsp" /> </definition> <definition name="/welcome.tiles" extends="baseLayout"> <put-attribute name="title" value="Welcome" /> <put-attribute name="body" value="Welcome.jsp" /> </definition> </tiles-definitions> But when I run the app,I am not getting any error. it just prints "Header.jsp Welcome.jsp Footer.jsp". It does not show the actual jsp pages. Please advise on what needs to be done. Thanks in advance Regards

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  • 'Stack level too deep' error in engine-like plugin with globalize

    - by nutsmuggler
    Hello folks. I have built an engine-like plugin thanks to the new features of Rails 2.3. It's a 'Product' module for a CMS, extrapolated from a previously existing (and working) model/controller. The plugin relies on easy_fckeditor and on globalize (description and title field are localised), and I suspect that globalized could be the culprit here... Everything works fine, except for the update action. I get the following error message: (posting just the first lines, all the message is about attribute_methods) stack level too deep /Library/Ruby/Gems/1.8/gems/activerecord-2.3.2/lib/active_record/attribute_methods.rb:64:in `generated_methods?' /Library/Ruby/Gems/1.8/gems/activerecord-2.3.2/lib/active_record/attribute_methods.rb:241:in `method_missing' /Library/Ruby/Gems/1.8/gems/activerecord-2.3.2/lib/active_record/attribute_methods.rb:249:in `method_missing' For referenze, the full error stack is here: http://pastie.org/596546 I've tried to debug eliminating all the input fields, one by one, but I keep getting the error. fckeditor doesn't seem the culprit (error even without fckeditor) This is the action: def update params[:product][:term_ids] ||= [] @product = Product.find(params[:id]) respond_to do |format| if @product.update_attributes(params[:product]) flash[:notice] = t(:Product_was_successfully_updated) format.html { redirect_to products_path } format.xml { head :ok } else format.html { render :action => "edit" } format.xml { render :xml => @product.errors, :status => :unprocessable_entity } end end end As you see it's quite straightforward. Of course I am not hoping someone to solve this question straightaway, I'd just like to have a head up, a suggestion about where to look to solve this issue. Thanks in advance, Davide

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  • Is a GWT app running on Google App Engine protected from CSRF

    - by gerdemb
    I'm developing a GWT app running on the Google App Engine and wondering if I need to worry about Cross-site request forgery or is that automatically taken care of for me? For every RPC request that requires authentication, I have the following code: public class BookServiceImpl extends RemoteServiceServlet implements BookService { public void deleteInventory(Key<Inventory> inventoryKey) throws NotLoggedInException, InvalidStateException, NotFoundException { DAO dao = new DAO(); // This will throw NotLoggedInException if user is not logged in User user = dao.getCurrentUser(); // Do deletion here } } public final class DAO extends DAOBase { public User getCurrentUser() throws NotLoggedInException { currentUser = UserServiceFactory.getUserService().getCurrentUser(); if(currentUser == null) { throw new NotLoggedInException(); } return currentUser; } I couldn't find any documentation on how the UserService checks authentication. Is it enough to rely on the code above or do I need to to more? I'm a beginner at this, but from what I understand to avoid CSRF attacks some of the strategies are: adding an authentication token in the request payload instead of just checking a cookie checking the HTTP Referer header I can see that I have cookies set from Google with what look like SID values, but I can't tell from the serialized Java objects in the payloads if tokens are being passed or not. I also don't know if the Referer header is being used or not. So, am I worrying about a non-issue? If not, what is the best strategy here? This is a common enough problem, that there must be standard solutions out there...

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  • Refreshing WEB-INF/lib in Google App Engine (with Eclipse)

    - by Adrian Petrescu
    Hi, I've created a new Google App Engine project within Eclipse. I copied several JARs that I need for my application into the WEB-INF/lib directory, and add them to the build path. I make some random calls to these JARs from within the handler, deploy, and everything works fine. However, if I then change one of the JARs outside the project, and copy the new version to WEB-INF/lib (with the same name) and re-deploy, it doesn't seem to be sending the new JAR; everything is still linking to the old one even though it's not even in my WEB-INF/lib anymore. I'm guessing it's being cached by the server or Eclipse is not even realizing something has changed in order to upload the new version. If I just create a new project with the new JAR, everything is fine again (until I have to make another change...) but of course I don't want to have to create a new project for every change to a dependency I make. My question is, how can I make GAE re-upload all the JARs I have from within Eclipse? Thanks in advance, guys :) -Adrian

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  • Debugging a Google Web Toolkit application that has an error when deployed on Google App Engine

    - by gerdemb
    I have a Google Web Toolkit application that I am deploying to Google App Engine. In the deployed application, I am getting a JavaScript error Uncaught TypeError: Cannot read property 'f' of null. This sounds like the JavaScript equivalent of a Java NullPointerException. The problem is that the GWT JavaScript is obfuscated, so it's impossible to debug in the browser and I can't reproduce the same problem in hosted mode where I could use the Java debugger. I think the reason I'm only seeing the error on the deployed application is that the database I'm using on the GAE server is triggering something differently than the test database I'm using during testing and development. So, any ideas about the best way to proceed? I've thought of the following things: Deploy a non-obsfucated version of my application. Despite a lot of Googling, I can't figure out how to do this using the automatic deploy script provided with the Google Eclipse Plugin. Does anyone know? Download and copy my GAE data to the local server Somehow point my development code to use the GAE server for data instead of the local test database. This seems like the best idea... Can anyone suggest how to proceed here? Finally, is there a way to catch these JavaScript errors on the production server and log them somewhere? Without logging, I won't have anyway to know if my users are having errors that don't occur on the server. The GWT.log() function is automatically stripped out of the production code...

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  • Getting broken link error whle Using App Engine service accounts

    - by jade
    I'm following this tutorial https://developers.google.com/bigquery/docs/authorization#service-accounts-appengine Here is my main.py code import httplib2 from apiclient.discovery import build from google.appengine.ext import webapp from google.appengine.ext.webapp.util import run_wsgi_app from oauth2client.appengine import AppAssertionCredentials # BigQuery API Settings SCOPE = 'https://www.googleapis.com/auth/bigquery' PROJECT_NUMBER = 'XXXXXXXXXX' # REPLACE WITH YOUR Project ID # Create a new API service for interacting with BigQuery credentials = AppAssertionCredentials(scope=SCOPE) http = credentials.authorize(httplib2.Http()) bigquery_service = build('bigquery', 'v2', http=http) class ListDatasets(webapp.RequestHandler): def get(self): datasets = bigquery_service.datasets() listReply = datasets.list(projectId=PROJECT_NUMBER).execute() self.response.out.write('Dataset list:') self.response.out.write(listReply) application = webapp.WSGIApplication( [('/listdatasets(.*)', ListDatasets)], debug=True) def main(): run_wsgi_app(application) if __name__ == "__main__": main() Here is my app.yaml file code application: bigquerymashup version: 1 runtime: python api_version: 1 handlers: - url: /favicon\.ico static_files: favicon.ico upload: favicon\.ico - url: .* script: main.py And yes i have added app engine service account name in google api console Team tab with can edit permissions. When upload the app and try to access the link it says Oops! This link appears to be broken. Ealier i ran this locally and tried to access it using link localhost:8080.Then i thought may be running locally might be giving the error so i uploaded my code to http://bigquerymashup.appspot.com/ but still its giving error.

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  • Efficiently Serving Dynamic Content in Google App Engine

    - by awegawef
    My app on google app engine returns content items (just text) and comments on them. It works like this (pseudo-ish code): query: get keys of latest content #query to datastore for each item in content if item_dict in memcache: use item_dict else: build_item_dict(item) #by fetching from datastore store item_dict in memcache send all item_dicts to template Sorry if the code isn't understandable. I get all of the content dictionaries and send them to the template, which uses them to create the webpage. My problem is that if the memcache has expired, for each item I want to display, I have to (1) lookup item in memcache, (2) since no memcache exists I must fetch item from the datastore, and (3) store the item in memcache. These calls build up quickly. I don't set an expire time for the entries to the memcache, so this really only happens once in the morning, but the webpage takes long enough to load (~1 sec) that the browser reports it as not existing. Regularly, my webpages take about 50ms to load. This approach works decently for frequent visits, but it has its flaws as shown above. How can I remedy this? The entries are dynamic enough that I don't think it would be in my best interest to cache my initial request. Thanks in advance

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  • Proper way of naming your Java Google App Engine Project

    - by Saif Bechan
    I am starting out with Google's App Engine in Java. I have seen the tutorial video but I do not understand the naming of the project package. It is going to be a guestbook, that's why the name is guestbook, I understand that part. But after that I see package name. 1)Is that something you import into the project, or is is something you create. I have seen this a lot in projects, something like com.xxx.xxx. 2)How do you name this type of thing or is this an import. I have looked at another tutorial there they take the naming to a whole new level. The name of both the project and the package is de.vogella.gae.java.todo. 3)What does this mean in java terms. 4)Maybe one of you can help me with this specific project I want to start. I want to create a Google App project that for now only serves static files. I will leave the project empty and just put all my static files in the war directory of the project. I want the domain name to be mydomainstatic

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  • Problem uploading app to google app engine

    - by Oberon
    I'm having problems uploading an app to the google-app-engine from my work place. I believe the problem is related to proxy, because I do not see the same problem when following the same procedure from home. (I do not specify HTTP_PROXY from home). These are the commands I run: HTTP_PROXY=http://proxy.<thehostname>.com:8080 HTTP_PROXY=https://proxy.<thehostname>.com:8080 appcfg.py --insecure update myappfolder When running the commands I get prompted for email and password, as expected, but after that it immediately exits with this errormessage: Error 302: --- begin server output --- <HTML> <HEAD> <TITLE>Moved Temporarily</TITLE> </HEAD> <BODY BGCOLOR="#FFFFFF" TEXT="#000000"> <H1>Moved Temporarily</H1> The document has moved <A HREF="https://www.google.com/accounts/ClientLogin">here</A>. </BODY> </HTML> --- end server output --- Note: I added the --insecure option because else it gave a warning of missing ssl module. Any idea how to solve or workaround this problem?

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  • Google App Engine - How to implement the activity stream in a social network

    - by spidee
    I want some ideas on the best practice to implement an activity stream for a social network im building in app engine (PYTHON) I first want to keep a log for all activities of each user - so that we have a history. i.e. someone became a friend, added a picture, changed their address etc. This way we have a users history available should we need it. Also mean we can remove friendship joins, change user data but have a historical log. I also want to stream a users activity to their friends. for this only the last X activities need to be kept - that is in the scenario that messages are sent to friends when an activity occurs. Its pretty straight forward designing a history log - ie: when, what, where. The complication comes as to how we notify friends of a user as to their activity. In our app friendships are not mutual - ie they are based on the twitter following model. Some accounts could have thousands of followers. What is the best approach to model this. using a many to many join table and doing a costly query - using a feed class that fired a copy of the activity to all the subscribers - maybe into mcache? As their maybe a need to fire thousands of messages i would imagine a cron job would need to be used. Any help ideas thoughts on this Thx

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  • get_by_id method on Model classes in Google App Engine Datastore

    - by tarn
    I'm unable to workout how you can get objects from the Google App Engine Datastore using get_by_id. Here is the model from google.appengine.ext import db class Address(db.Model): description = db.StringProperty(multiline=True) latitude = db.FloatProperty() longitdue = db.FloatProperty() date = db.DateTimeProperty(auto_now_add=True) I can create them, put them, and retrieve them with gql. address = Address() address.description = self.request.get('name') address.latitude = float(self.request.get('latitude')) address.longitude = float(self.request.get('longitude')) address.put() A saved address has values for >> address.key() aglndWVzdGJvb2tyDQsSB0FkZHJlc3MYDQw >> address.key().id() 14 I can find them using the key from google.appengine.ext import db address = db.get('aglndWVzdGJvb2tyDQsSB0FkZHJlc3MYDQw') But can't find them by id >> from google.appengine.ext import db >> address = db.Model.get_by_id(14) The address is None, when I try >> Address.get_by_id(14) AttributeError: type object 'Address' has no attribute 'get_by_id' How can I find by id? EDIT: It turns out I'm an idiot and was trying find an Address Model in a function called Address. Thanks for your answers, I've marked Brandon as the correct answer as he got in first and demonstrated it should all work.

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  • Google App Engine datastore encoding?

    - by sernaferna
    I'm using the GAE datastore for a Java application, and storing some text that will be in numerous languages. In my servlet, I'm first checking to see if there's any data in the data store, and, if not, I'm creating some, similar to the following: ArrayList<Lang> list = new ArrayList<Lang>(); list.add(new Lang("EN", "English", 1)); list.add(new Lang("ES", "Español", 0)); //more languages here... PersistenceManager pm = PMF.get().getPersistenceManager(); for(Lang l : list) { pm.makePersistent(l); } Since this is using JDO, I guess I should include the relevent parts of the Lang class too: @PersistenceCapable public class Lang { @PrimaryKey private String code; @Persistent private String name; @Persistent private int popularity; // getters & setters & constructors... } However, the non-ASCII characters are giving me grief. I've set my Eclipse project to use the UTF-8 encoding instead of the default Cp1252, so I think I'm okay from that perspective, but when I use the App Engine Data Viewer to look at my data, that Español entry becomes Español, and when I click on it to view it, I get a 500 Server Error. (There are some other entries with right-to-left text that don't even show up in the Data Viewer at all, but one problem at a time...) Is there anything special I can do in my code to set the character encoding, or specify to GAE that the data I'm storing is UTF-8? Or is the problem on the Eclipse side, and is there something I should be doing with my Java code?

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  • Google App-Engine Java Batch Update

    - by Manjoor
    I need to upload a .csv file and save the records in bigtable. My application successfully parse 200 the records in the csv files and save to table. Here is my code to save the data. for (int i=0;i<lines.length -1;i++) //lines hold total records in csv file { String line = lines[i]; //The record have 3 columns integer,integer,Text if(line.length() > 15) { int n = line.indexOf(","); if (n>0) { int ID = lInteger.parseInt(ine.substring(0,n)); int n1 = line.indexOf(",", n + 2); if(n1 > n) { int Col1 = Integer.parseInt(line.substring(n + 1, n1)); String Col2 = line.substring(n1 + 1); myTable uu = new myTable(); uu.setId(ID); uu.setCol1(MobNo); Text t = new Text(Col2); uu.setCol2(t); PersistenceManager pm = PMF.get().getPersistenceManager(); pm.makePersistent(uu); pm.close(); } } } } But when no of records grow it gives timeout error. The csv file may have upto 800 records. Is it possible to do that in App-Engine? (something like batch update)

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  • Google App Engine: TypeError problem with Models

    - by Rosarch
    I'm running Google App Engine on the dev server. Here is my models file: from google.appengine.ext import db import pickle import re re_dept_code = re.compile(r'[A-Z]{2,}') re_course_number = re.compile(r'[0-9]{4}') class DependencyArcHead(db.Model): sink = db.ReferenceProperty() tails = db.ListProperty() class DependencyArcTail(db.Model): courses = db.ListProperty() It gives this error: Traceback (most recent call last): File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 3192, in _HandleRequest self._Dispatch(dispatcher, self.rfile, outfile, env_dict) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 3135, in _Dispatch base_env_dict=env_dict) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 516, in Dispatch base_env_dict=base_env_dict) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 2394, in Dispatch self._module_dict) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 2304, in ExecuteCGI reset_modules = exec_script(handler_path, cgi_path, hook) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 2200, in ExecuteOrImportScript exec module_code in script_module.__dict__ File "main.py", line 19, in <module> from src.Models import Course, findCourse, validateCourse, dictForJSON, clearAndBuildDependencyGraph File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 1279, in Decorate return func(self, *args, **kwargs) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 1929, in load_module return self.FindAndLoadModule(submodule, fullname, search_path) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 1279, in Decorate return func(self, *args, **kwargs) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 1831, in FindAndLoadModule description) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 1279, in Decorate return func(self, *args, **kwargs) File "C:\Program Files\Google\google_appengine\google\appengine\tools\dev_appserver.py", line 1782, in LoadModuleRestricted description) File "src\Models.py", line 14, in <module> class DependencyArcHead(db.Model): File "src\Models.py", line 17, in DependencyArcHead tails = db.ListProperty() TypeError: __init__() takes at least 2 arguments (1 given) What am I doing wrong?

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  • Load javascript in app engine

    - by user624392
    I got so confused loading javascript in app engine. I am using django template. In my base html file. First I can't load my downloaded jquery from local say d:/jquery.js like <script src="d:\jquery.js" type="text/javascript" ></script></head>, This line is in my base html file. It works when I load jquery from remote. Like <script src="https://ajax.googleapis.com/ajax/libs/jquery/1.5.1/jquery.min.js"type="text/javascript" ></script></head> I dont know why. Second, I can't load my own-created javascript to my html file, say I create a javascript like layout. Js and I try to load it like this in my child html file, which, by the way, inherits from the base html. <body><script src="layout.js" type="text/javascript"></script></body>, And it doesn't work at all, the only way it works I have tried is that I put the actual javascript in the body of my base html file. Like <body><script> $(document).ready( $("#yes"). Click(function() { $("#no"). Hide("slow"); })); </script> I dont know why either... Any help?

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  • Query distinct list of choices for Django form with App Engine Datastore

    - by Brian
    I've been trying to figure this out for hours across a couple of days, and can not get it to work. I've been everywhere. I'll continue trying to figure it out, but was hoping for a quicker solution. I'm using App Engine datastore + Django. Using a query in a view and custom forms, I was able to get a list to the form but then I was not able to post. I have been trying to figure out how to dynamically add the choices as part of the Django form... I've tried various ways with no success. Help! Below are the two models. I'd like to get a distinct list of address_id to show in the location field in InfoForm. This fields could (and maybe should) be named the same, but I thought it'd be easier if they were named different. class Info(db.Model): user = db.UserProperty() location = db.StringProperty() info = db.StringProperty() created = db.DateTimeProperty(auto_now_add=True) modified = db.DateTimeProperty(auto_now=True) class Locations(db.Model): user = db.UserProperty() address_id = db.StringProperty() address = db.StringProperty() class InfoForm(djangoforms.ModelForm): info = forms.ChoiceField(choices=INFO_CHOICES) location = forms.ChoiceField() class Meta: model = Info exclude = ['user','created','modified']

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  • Embedded scripting engine in .Net app

    - by Nate
    I am looking to replace an old control being used for scripting an application. The control used to be called SAX Basic, but is now called WinWrap. It provides us with two primary functions. 1) It's a scripting engine (VB) 2) It has a GUI for developing and debugging scripts that get run in the hosting application. The first feature it provides is actually pretty easy to replace. There are so many great methods of running just about any kind of code at runtime that it's almost a non-issue. Just about any language targeting the .Net runtime will work for us. We've looked at running C#, PowerShell, VB.Net, IronPython, etc. I've also taken a brief look at Lua and F#, but honestly the language isn't the biggest barrier here. Now, for the hard part that seems to keep getting me stuck. We want a code editor, and debugger. Something simple, not unlike PowerShell's ISE would be fine. Just as long as a file could be created, saved, debugged and executed. I'm currently looking into Visual Studio 2010 Shell (Isolated) and I'm also looking at the feasibility of embedding PowerShell ISE in my application. Are there any other editor's I could embed/use in my application? Purchasing a product is not out of the question. It comes down to a combination of ease of use, how well it meets our needs, and how simple deployment and licensing is for developers. Thanks for the pointers

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  • Google App Engine error Object Manager has been closed

    - by newbie
    I had following error from Google App Engine when I was trying to iterate list in JSP page with EL. Object Manager has been closed I solved problem with following coe, but I don't think that it is very good solution to this problem: public List<Item> getItems() { PersistenceManager pm = getPersistenceManager(); Query query = pm.newQuery("select from " + Item.class.getName()); List<Item> items = (List<Items>) query.execute(); List<Item> items2 = new ArrayList<Item>(); // This line solved my problem Collections.copy(items, items2); // and this also pm.close(); return (List<Item>) items; } When I tried to use pm.detachCopyAll(items) it gave same error. I understood that detachCopyAll() method should do same what I did, but that method should be part of data nucelus, so it should be used instead of my owm methods. So why dosen't detachCopyAll() work at all?

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  • Implementing Unowned relationship Google App Engine

    - by nwallman
    My question is more of a best practices question on how to implement unowned relationships with Google App Engine. I am using JDO to do my persistence and like recommended in the google docs I'm persisting my list of unowned relationships like so: @PersistenceCapable(identityType = IdentityType.APPLICATION) public class User implements Serializable, UserDetails { ... @Persistent private List<Key> groups; ... } Now I came across my predicament when I went to query that list of objects using they Key object. So when I get my list of group keys in order to actually return a list of Group objects I have to do a look up on that key to get the object. My question is what is the recommended way of doing a unowned look up on a model object? Should I have an instance of the PersistanceManagerFactory on my Model object so I can do a lookup? Should I have an instance of my GroupDAO object on my Model object so I can do a look up? Should I have a Utility to do this type of lookup? I'm new to this so I just want to know which is the best way to do this. Thanks.

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  • Setting up App Engine to receive email addresses with ids in the address

    - by Mark M
    I am writing an App Engine app that is supposed to receive emails in this form: [email protected] (someID is an alphanumeric ID that I generate). I have this in my web.xml thinking it would catch emails that start with 'addcontact.': <servlet> <servlet-name>addNewContactServlet</servlet-name> <servlet-class>com.mycompany.server.AddNewContactServlet</servlet- class> </servlet> <servlet-mapping> <servlet-name>addNewContactServlet</servlet-name> <url-pattern>/_ah/mail/addcontact.*</url-pattern> </servlet-mapping> However, both on my dev machine and on google's servers email is not received. On the dev machine I get this message (I get a similar error in the deployed log) Message send failure HTTP ERROR 404 Problem accessing /_ah/mail/ [email protected]. Reason: NOT_FOUND I can receive email at fully specified addresses or when I use /_ah/mail/* The google documentation made me believe it was possible to include partial email addresses in web.xml. Am I not using the wildcard correctly? Does the period have something to do with it? Can this be done somehow?

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  • What 2D game engines are there available for C++?

    - by dysoco
    I just realized there are not C++ 2D Game Engines that I know of. For example, something like Pygame in Python, or Slick2D in Java. We have the following: SDL - Too low level, not a Game Engine SFML - Handles more things than SDL and it's more modern, but still not a Game Engine. I like it, but I have found it a little bit buggy with the 2.0 version. Irrlitch - It's a Game Engine, but 3D focused. Ogre3D - Same as Irrlitch Allegro - This is a Game Engine, but it's C based, I'd like a modern C++ library. Monocle Engine - This looks like what I need... but sadly there is no Documentation, no community... nothing, all I have is the Github repo. So, do you know any ? I'd like to use C++, not C#, not Java: I'm just more comfortable with C++.

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  • How can I read a textfile into matlab and make it a list?

    - by Ben Fossen
    I have a textfile that has the format gene complement(22995..24539) /gene="ppp" /locus_tag="MRA_0020" CDS complement(22995..24539) /gene="ppp" /locus_tag="MRA_0020" /codon_start=1 /transl_table=11 /product="putative serine/threonine phosphatase Ppp" /protein_id="ABQ71738.1" /db_xref="GI:148503929" gene complement(24628..25095) /locus_tag="MRA_0021" CDS complement(24628..25095) /locus_tag="MRA_0021" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ABQ71739.1" /db_xref="GI:148503930" gene complement(25219..26802) /locus_tag="MRA_0022" CDS complement(25219..26802) /locus_tag="MRA_0022" /codon_start=1 /transl_table=11 /product="hypothetical protein" /protein_id="ABQ71740.1" /db_xref="GI:148503931" I would like to read the textfile into Matlab and make a list with the information from the line gene as the starting point for each item in the list. So for this example there will be 3 items in the list. I have tried a few things and cannot get this to work. Anyone have any ideas of what I can do?

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  • Matlab: how do I force ode45 to take steps of exactly 0.01 on the T axis?

    - by Gravitas
    I'm using Matlab to solve a differential equation. I want to force ode45 to take constant steps, so it always increments 0.01 on the T axis while solving the equation. How do I do this? ode45 is consistently taking optimized, random steps, and I can't seem to work out how to make it take consistent, small steps of 0.01. Here is the code: options= odeset('Reltol',0.001,'Stats','on'); %figure(1); %clf; init=[xo yo zo]'; tspan=[to tf]; %tspan = t0:0.01:tf; [T,Y]=ode45(name,tspan,init,options);

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  • How do I get real integer overflows in MATLAB/Octave?

    - by marvin2k
    I'm working on a verification-tool for some VHDL-Code in MATLAB/Octave. Therefore I need data types which generate "real" overflows: intmax('int32') + 1 ans = -2147483648 Later on, it would be helpful if I can define the bit width of a variable, but that is not so important right now. When I build a C-like example, where a variable gets increased until it's smaller than zero, it spins forever and ever: test = int32(2^30); while (test > 0) test = test + int32(1); end Another approach I tried was a custom "overflow"-routine which was called every time after a number is changed. This approach was painfully slow, not practicable and not working in all cases at all. Any suggestions?

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  • Is SparkViewEngine dying?

    - by Stephane
    Hey, I am building a email service based on templates. I thought of using the spark view engine but it seems that It doesn't get much updates anymore. Support on .NET4.0 is not even yet complete and it fails at runtime when used in a console app. The little Intellisense support that was there in VS2008 doesn't seem to work on VS2010 (from the information I have found) Should I avoid it? What do you think?

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