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  • Can pydoc/help hide the documentation for inherited class methods and attributes?

    - by EOL
    When declaring a class that inherits from a specific class: class C(dict): added_attribute = 0 the documentation for C lists all the methods of dict (either through help(C) or pydoc). Is there a way to hide the inherited methods from the automatically generated documentation (the documentation string can refer to the base class, for non-overwritten methods)? This would be useful: pydoc lists the functions defined in a module after its classes. Thus, when the classes have a very long documentation, a lot of less than useful information is printed before the new functions provided by the module are presented, which makes the documentation harder to exploit (you have to skip all the documentation for the inherited methods until you reach something specific to the module being documented).

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  • Can anyone tell me why these lines are not working?

    - by user343934
    I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO_init_.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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  • Not work variables in django templates

    - by ??????? ???????
    My context dictionary not sending to my templates. I have function from django.shortcuts import render_to_response def home(request): return render_to_response('home.html',{'test':'test'}) and i have simple template such as: <html> <body> my test == {{test}} </body> </html> When i open my site in browser, i have "my test == ". settings.py is default. I dont use something custom. What the problem? Server is apache with wsgi module.

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  • Problem with sys.argv[1] when unittest module is in a script

    - by chrissygormley
    Hello, I have a script that does various things and access paramenters using sys.argv but when the script gets to the unittest part of the code it says there is no module for this. The script that I have is: class MyScript(): def __init__(self): self.value = sys.argv[1] def hello(self): print self.value def suite(self): modules_to_test = ('external_sanity_onvif', 'starttest') alltests = unittest.TestSuite() for module in map(__import__, modules_to_test): alltests.addTest(unittest.findTestCases(module)) return alltests if __name__ == '__main__': Run = MyScript() Run.hello() log_file = 'log_file.txt' test_file = open(log_file, "w") runner = unittest.TextTestRunner(test_file) unittest.main(defaultTest='Run.suite', testRunner=runner) Say I enter ./script.py Hello in the command line. The error I get is: AttributeError: 'module' object has no attribute 'Hello' If I remove the unittest module it works. Also if I remove the testrunner log and leave it at: unittest.main(defaultTest='Run.suite') This still doesn't work. Can anyone help. Thanks

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  • PyParsing: Is this correct use of setParseAction()?

    - by Rosarch
    I have strings like this: "MSE 2110, 3030, 4102" I would like to output: [("MSE", 2110), ("MSE", 3030), ("MSE", 4102)] This is my way of going about it, although I haven't quite gotten it yet: def makeCourseList(str, location, tokens): print "before: %s" % tokens for index, course_number in enumerate(tokens[1:]): tokens[index + 1] = (tokens[0][0], course_number) print "after: %s" % tokens course = Group(DEPT_CODE + COURSE_NUMBER) # .setResultsName("Course") course_data = (course + ZeroOrMore(Suppress(',') + COURSE_NUMBER)).setParseAction(makeCourseList) This outputs: >>> course.parseString("CS 2110") ([(['CS', 2110], {})], {}) >>> course_data.parseString("CS 2110, 4301, 2123, 1110") before: [['CS', 2110], 4301, 2123, 1110] after: [['CS', 2110], ('CS', 4301), ('CS', 2123), ('CS', 1110)] ([(['CS', 2110], {}), ('CS', 4301), ('CS', 2123), ('CS', 1110)], {}) Is this the right way to do it, or am I totally off? Also, the output of isn't quite correct - I want course_data to emit a list of course symbols that are in the same format as each other. Right now, the first course is different from the others. (It has a {}, whereas the others don't.)

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  • about the post_save signal and created argument

    - by panchicore
    the docs says: post_save django.db.models.signals.post_save created A boolean; True if a -new- record was create. and I have this: from django.db.models.signals import post_save def handle_new_user(sender, instance, created, **kwargs): print "--------> save() "+str(created) post_save.connect(handle_new_user, sender=User) when I do in shell: u = User(username="cat") u.save() >>> --------> save() True u.username = "dog" u.save() >>> --------> save() True I expect a -------- save() False when I save() the second time because is an update? not?

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  • JQuery cookie access has stopped working for GAE app

    - by Greg
    I have a google app engine app that has been running for some time, and some javascript code that checks for a login cookie has suddenly stopped working. As far as I can tell, NO code has changed. The relevant code uses the jquery cookies plugin (jquery.cookies.2.2.0.min.js)... // control the default screen depending // if someone is logged in if( $.cookies.get('dev_appserver_login') != null || $.cookies.get('ACSID') != null ) { alert("valid cookie!") $("#inventory-container").show(); } else { alert("INvalid cookie!") $("#welcome-container").show(); } The reason for the two checks is that in the GAE SDK, the cookies are named differently. The production system uses 'ACSID'. This if statement works in the SDK and now fails 100% of the time in production. I have verified that the cookie is, in fact, present when I inspect the page. Thoughts?

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  • The truth value of an array with more than one element is ambigous when trying to index an array

    - by user1440194
    I am trying to put all elements of rbs into a new array if the elements in var(another numpy array) is =0 and <=.1 . However when I try the following code I get this error: ValueError: The truth value of an array with more than one element is ambiguous. Use a.any() or a.all() rbs = [ish[4] for ish in realbooks] for book in realbooks: var -= float(str(book[0]).replace(":", "")) bidsred = rbs[(var <= .1) and (var >=0)] any ideas on what I'm doing wrong?

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  • Declare models elsewhere than in "models.py"

    - by sebpiq
    Hi ! I have an application that splits models into different files. Actually the folder looks like : >myapp __init__.py models.py >hooks ... ... myapp don't care about what's in the hooks, folder, except that there are models, and that they have to be declared somehow. So, I put this in myapp.__init__.py : from django.conf import settings for hook in settings.HOOKS : try : __import__(hook) except ImportError as e : print "Got import err !", e #where HOOKS = ("myapp.hooks.a_super_hook1", ...) The problem is that it doesn't work when I run syncdb(and throws some strange "Got import err !"... strange considering that it's related to another module of my program that I don't even import anywhere :/ ) ! So I tried successively : 1) for hook in settings.HOOKS : try : exec ("from %s import *" % hook) doesn't work either : syncdb doesn't install the models in hooks 2) from myapp.hooks.a_super_hook1 import * This works 3) exec("from myapp.hooks.a_super_hook1 import *") This works to So I checked that in the test 1), the statement executed is the same than in tests 2) and 3), and it is exactly the same ... Any idea ???

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  • Right way to return proxy model instance from a base model instance in Django ?

    - by sotangochips
    Say I have models: class Animal(models.Model): type = models.CharField(max_length=255) class Dog(Animal): def make_sound(self): print "Woof!" class Meta: proxy = True class Cat(Animal): def make_sound(self): print "Meow!" class Meta: proxy = True Let's say I want to do: animals = Animal.objects.all() for animal in animals: animal.make_sound() I want to get back a series of Woofs and Meows. Clearly, I could just define a make_sound in the original model that forks based on animal_type, but then every time I add a new animal type (imagine they're in different apps), I'd have to go in and edit that make_sound function. I'd rather just define proxy models and have them define the behavior themselves. From what I can tell, there's no way of returning mixed Cat or Dog instances, but I figured maybe I could define a "get_proxy_model" method on the main class that returns a cat or a dog model. Surely you could do this, and pass something like the primary key and then just do Cat.objects.get(pk = passed_in_primary_key). But that'd mean doing an extra query for data you already have which seems redundant. Is there any way to turn an animal into a cat or a dog instance in an efficient way? What's the right way to do what I want to achieve?

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  • How do I create a Django ModelForm, so that it's fields are sometimes required, sometimes not?

    - by Graf
    Ok, here is the question. Imagine I have a ModelForm which have only two fields. like this one: class ColorForm(forms.Form): color_by_name = forms.CharField() color = forms.IntegerField(widget = forms.Select(choices=COLOR_CHOICES)) So a user can either input a color name, a choose it from a list. Color is required, but that doesn't mean, that user should enter it manually. There do I put validation, so that my code checks if user selected color in dropdownlist and if not then he should write it manually?

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  • Pickling a class definition

    - by Giorgio
    Is there a way to pickle a class definition? What I'd like to do is pickle the definition (which may created dynamically), and then send it over a TCP connection so that an instance can be created on the other end. I understand that there may be dependencies, like modules and global variables that the class relies on. I'd like to bundle these in the pickling process as well, but I'm not concerned about automatically detecting the dependencies because it's okay if the onus is on the user to specify them.

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  • Append to list of lists

    - by Joel
    Hello, I am trying to build a list of lists using the following code: list=3*[[]] Now I am trying to append a string to the list in position 0: list[0].append("hello") However, instead of receiving the list [ ["hello"] , [], [] ] I am receiving the list: [ ["hello"] ,["hello"] , ["hello"] ] Am I missing something? Thanks, Joel

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  • Can I move beaker.SessionMiddleware to handle method somehow?

    - by Alexander A.Sosnovskiy
    It's a bit ugly that many lines of code fall into "__main__". Can someone give me a tip of how to move SessionMiddleware into handle method? I should notice that I use session in CoreXmlParser. Thanks in advance ! def handle(environ, start_response): req = webob.Request(environ) c = CoreXmlParser(req) resp = webob.Response(body=c(), charset = 'utf-8', status='200 OK', \ request=req, content_type='text/xml') resp(environ, start_response) return resp.app_iter if __name__ == '__main__': #parse config file for session options app = SessionMiddleware(handle, some_session_opts_here) from flup.server.fcgi import WSGIServer WSGIServer(app).run()

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  • Google App Engine - Document Editor Creation/Tap Into Google Docs?

    - by Josh Patton
    What is the best way to create a custom document editor in GAE? I'm making a website meant for a School Robotics Club (With support for any other organization - DRY). We currently use Google services for online collaboration, I'm wondering if there is a way to tap into Google Docs and allow users to edit a Google Document without using Google Accounts or the Google Doc interface. If that is not possible (I've researched and I don't think it is), what is the best way to make a document editor? I want it completely on the website I'm creating, so I'm assuming just some javascript editor like TinyMCE + Ajax + Datastore. Is their anything that replicates Google Doc's/Microsoft Offices's/OpenOffice.org's feature set as far as fonts, spacing, alignment, justification, etc.?

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  • Shuttle control in wxPython

    - by Mridang Agarwalla
    Hi, I'm trying to implement a shuttle control in wxPython but there doesn't seem to be one. I've decided to use two listbox controls. The shuttle control looks like this: I've got two listboxes — one's populated, one's not. Could someone show me how to add a selected item to the second list box when it is double clicked? It should be removed from the first. When it is double clicked in the second, it should be added to the first and removed from the second. The shuttle control implements these by default but it's a pity it isn't there. Thank you.

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  • How do I modify gitstats to only utilize a specified file extension for it's statistics?

    - by Fake Code Monkey Rashid
    Hello good people! The website of the statistics generator in question is: http://gitstats.sourceforge.net/ It's git repo can be cloned from: git clone git://repo.or.cz/gitstats.git What I want to do is something like: ./gitstatus --ext=".py" /input/foo /output/bar Failing being able to easily pass the above option without heavy modification, I'd just hardcore the file extentsion I want to be included. However, I'm unsure of the relevant section of code to modify and even if I did no, I'm unsure of how to start such modifications. It's seems like it'd be rather simple but alas...

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  • Google App Engine django model form does not pick up BlobProperty

    - by Wes
    I have the following model: class Image(db.Model): auction = db.ReferenceProperty(Auction) image = db.BlobProperty() thumb = db.BlobProperty() caption = db.StringProperty() item_to_tag = db.StringProperty() And the following form: class ImageForm(djangoforms.ModelForm): class Meta: model = Image When I call ImageForm(), only the non-Blob fields are created, like this: <tr><th><label for="id_auction">Auction:</label></th><td><select name="auction" id="id_auction"> <option value="" selected="selected">---------</option> <option value="ahRoYXJ0bWFuYXVjdGlvbmVlcmluZ3INCxIHQXVjdGlvbhgKDA">2010-06-19 11:00:00</option> </select></td></tr> <tr><th><label for="id_caption">Caption:</label></th><td><input type="text" name="caption" id="id_caption" /></td></tr> <tr><th><label for="id_item_to_tag">Item to tag:</label></th><td><input type="text" name="item_to_tag" id="id_item_to_tag" /></td></tr> I want the Blob fields to be included in the form as well (as file inputs). What am I doing wrong?

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  • Executing a jquery effect on demand. Is it possible?

    - by Chocol8
    I was looking the Highlight effect of Jquery's. That effect is really the one i would like to add in my webpage. By looking at the the source code, i noticed that the effect will be reproduced on user's click of the div. $("div").click(function () { $(this).effect("highlight", {}, 3000); }); In my webpage i have an ImageButton <asp:ImageButton ID="btnFavorite" runat="server" ImageUrl="~/Images/Favorite.png"/> I would love to perform the highlight effect to the div, when the user clicks on the image button. Is it possible? UPDATE: If it is possible, could i use something like "OnClientClick=" of the ImageButton, since the imagebutton controls are added dynamically to the webpage?

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  • Djangoo Foreign key queries

    - by Hulk
    In the following model: class header(models.Model): title = models.CharField(max_length = 255) created_by = models.CharField(max_length = 255) def __unicode__(self): return self.id() class criteria(models.Model): details = models.CharField(max_length = 255) headerid = models.ForeignKey(header) def __unicode__(self): return self.id() class options(models.Model): opt_details = models.CharField(max_length = 255) headerid = models.ForeignKey(header) def __unicode__(self): return self.id() If there is a row in the database for table header as Id=1, title=value-mart , createdby=CEO How do i query criteria and options tables to get all the values related to header table id=1 Also can some one please suggest a good link for queries examples, Thanks..

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  • Django - urls.py - Filenames with a hash/pound (#) sign?

    - by miya
    I'm using django and realized that when the filename that the user wants to access (let's say a photo) has the pound sign, the entry in the url.py does not match. Any ideas? url(r'^static/(?P<path>.*)$', 'django.views.static.serve', {'document_root': MEDIA_ROOT}, it just says: "/home/user/project/static/upload/images/hello" does not exist when actually the name of the file is: hello#world.jpg Thanks, Nico

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  • What's the straightforward way to implement one to many editing in list_editable in django admin?

    - by Nate Pinchot
    Given the following models: class Store(models.Model): name = models.CharField(max_length=150) class ItemGroup(models.Model): group = models.CharField(max_length=100) code = models.CharField(max_length=20) class ItemType(models.Model): store = models.ForeignKey(Store, on_delete=models.CASCADE, related_name="item_types") item_group = models.ForeignKey(ItemGroup) type = models.CharField(max_length=100) Inline's handle adding multiple item_types to a Store nicely when viewing a single Store. The content admin team would like to be able to edit stores and their types in bulk. Is there a simple way to implement Store.item_types in list_editable which also allows adding new records, similar to horizontal_filter? If not, is there a straightforward guide that shows how to implement a custom list_editable template? I've been Googling but haven't been able to come up with anything. Also, if there is a simpler or better way to set up these models that would make this easier to implement, feel free to comment.

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