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  • Python - from file to data structure?

    - by Seafoid
    Hi, I have large file comprising ~100,000 lines. Each line corresponds to a cluster and each entry within each line is a reference i.d. for another file (protein structure in this case), e.g. 1hgn 1dju 3nmj 8kfn 9opu 7gfb 4bui I need to read in the file as a list of lists where each line is a sublist, thus preserving the integrity of the cluster, e.g. nested_list = [['1hgn', '1dju', '3nmj', '8kfn'], ['9opu', '7gfb'], ['4bui']] My current code creates a nested list but the entries within each list are a single string and not comma separated. Therefore, I cannot splice the list with indices so easily. Any help greatly appreciated. Thanks, S :-)

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  • NZEC Run time Error Occured

    - by madan
    import math def gen_caller(a): for z in a: x,y=z if x==1: x=2 if y>=x and y-x<=100000: for i in range(x,y+1): flag=0 for j in range(2,(long(math.sqrt(i))+1)): if(i%j==0): flag=1 break if flag==0: print i print "" n=(int(raw_input())) gen_caller([[(long(raw_input())) for j in range(0,2)] for i in range(0,n) if n<=10])

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  • How do I use "this" in a member function?

    - by Peter Stewart
    I've written a member function of class Node to read a tree of Nodes in postfix order. It will be called by the Node instance which is the root node of the tree. So: N.postfix(); these appear to be illeagal: *this->left.postfix(); *this->right.postfix(); What is the proper way to do this? class Node { public: const char *cargo; int depth; Node *left; Node *right void Node::postfix() { if (this==__nullptr) { return; } else { *this->left.postfix(); *this->right.postfix(); out<<*this->cargo<<"\n"; return; } };

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  • database connection OK,result not appear

    - by klox
    hi..all.for now i'm already connected to database but the result not appear at Tuner range is"+res+"this is my code: var str=data[0]; var matches=str.match(/[EE|EJU].*D/i); $.ajax({ type:"post", url:"process1.php", data:"tversion="+matches+"&action=tunermatches", cache:false, async:false, success: function(res){ $('#value').replacewith("<div id='value'><h6>Tuner range is"+res+".</h6></div>"); } }); }); and this is my process file: //connect to database $dbc=mysql_connect(_SRV,_ACCID,_PWD) or die(_ERROR15.": ".mysql_error()); $db=mysql_select_db("qdbase",$dbc) or die(_ERROR17.": ".mysql_error()); switch(postVar('action')) { case 'tunermatches' : tunermatches(postVar('tversion')); break; function tunermatches($tversion)){ $Tuner=mysql_real_escape_string($tversion); $sql= "SELECT remark FROM settingdata WHERE itemname='Tuner_range' AND itemdata='".$Tunermatches."'"; $res=mysql_query($sql) or die (_ERROR26.":".mysql_error()); $dat=mysql_fetch_array($res,MYSQL_NUM); if($dat[0]>0) { echo $dat[0]; } mysql_close($dbc); }

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  • How can I "override" deepcopy in Python?

    - by Az
    Hi there, I'd like to override __deepcopy__ for a given SQLAlchemy-mapped class such that it ignores any SQLA attributes but deepcopies everything else that's part of the class. I'm not particularly familiar with overriding any of Python's built-in objects in particular but I've got some idea as to what I want. Let's just make a very simple class User that's mapped using SQLA. class User(object): def __init__(self, user_id, name): self.user_id = user_id self.name = name I've used dir() to see, before and after mapping, what SQLAlchemy-specific attributes there are and I've found _sa_class_manager and _sa_instance_state. Provided those are the only ones how would I ignore that when defining __deepcopy__? Also, are there any attributes the SQLA injects into the mapped object? (I asked this in a previous question (as an edit a few days after I selected an answer to the main question, though) but I think I missed the train there. Apologies for that.)

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  • Using mercurial for web-design version control (dealing with images)

    - by Acorn
    I'm very new to Version Control, and I was wondering if I could get some advice on how it can fit into website design. At the moment I'm working on a typical, simple website that includes images: A few .html files and a .css file One folder full of photographs Another folder with the corresponding thumbnails Can I just put the whole lot in a repository? Or is there a better way I could apply Version Control to it? How should I deal with the images? edit: How well will it work with changes to the images? What if I decide to try and optimise my photographs or resize them. I wont be able to see what exactly changed about the images, should comments be enough to keep track of that?

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  • How to convert list into a string?

    - by PARIJAT
    I have extracted some data from the file and want to write it in the file 2 but the program says 'sequence item 1: expected string, list found', I want to know how I can convert buffer[] i.e. string into sequence, so that it could be saved in file 2. file = open('/ddfs/user/data/k/ktrip_01/hmm.txt','r') file2 = open('/ddfs/user/data/k/ktrip_01/hmm_write.txt','w') buffer = [] rec = file.readlines() for line in rec : field = line.split() print '>',field[0] term = field[0] buffer.append(term) print field[1], field[2], field[6], field[12] term1 = field [1] buffer.append(term1) term2 = field[2] buffer.append[term2] term3 = field[6] buffer.append[term3] term4 = field[12] buffer.append[term4] file2.write(buffer) file.close() file2.close()

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  • A Beginners' Guide to Learning JavaScript?

    - by CloseDiamond
    There's a few mentions of Javascript newbies getting starting by checking out some of Douglas Crockford's work (http://stackoverflow.com/questions/11246/best-resources-to-learn-javascript), but none of his resources seem to be for those looking to learn from the ground up. Are there any suggestions for complete beginners regarding how best to learn JavaScript? Personally I have plenty of HTML and CSS experience, and some PHP (which would help learning JS), but for those that don't know any programming language what would you recommend?

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  • can I have multiline text with GD and PHP?

    - by alekone
    hello! I'm trying to output multiline text with GD+PHP but can't get it working. my php knowledge is really basic. here's the code, any idea on how to output 2 or 3 lines of text? $theText = (isset($_GET['caption']))? stripslashes($_GET['caption']) :''; imagettftext($baseImage, $textSize, $textAngle, $textXposition, $textYposition, $textColor, $fontName, $theText);

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  • Returning currently displayed index of an array Javascript...

    - by Jeff Kindred
    I have a simple array with x number of items. I am displaying them individually via a link click... I want to update a number that say 1 of 10. when the next one is displayed i want it to display 2 of 10 etc... I have looked all around and my brain is fried right now... I know its simple I just cant get it out. <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head> <meta http-equiv="Content-Type" content="text/html; charset=utf-8"/> <title>Page Title</title> <link rel="stylesheet" href="style.css" type="text/css" media="screen" charset="utf-8"/> <script type="text/javascript"> var quotations = new Array() quotations[0]= "1" quotations[1]= "2" quotations[2]= "3" quotations[3]= "4" quotations[4]= "5" quotations[5]= "6" quotations[6]= "7" numQuotes = quotations.length; curQuote = 1; function move( xflip ) { curQuote = curQuote + xflip; if (curQuote > numQuotes) { curQuote = 1 ; } if (curQuote == 0) { curQuote = numQuotes ; } document.getElementById('quotation').innerHTML=quotations[curQuote - 1]; } var curPage = //this is where the current index should go </script> </head> <body> <div id="quotation"> <script type="text/javascript">document.write(quotations[0]);</script> </div> <div> <p><a href="javascript();" onclick="move(-1)">GO back</a> <script type="text/javascript">document.write(curPage + " of " + numQuotes)</script> <a href="javascript();" onclick="move(1)">GO FORTH</a></p> </div> </body> </html>

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  • In what order should the Python concepts be explained to absolute beginners?

    - by Tomaž Pisanski
    I am teaching Python to undergraduate math majors. I am interested in the optimal order in which students should be introduced to various Python concepts. In my view, at each stage the students should be able to solve a non-trivial programming problem using only the tools available at that time. Each new tool should enable a simpler solution to a familiar problem. A selection of numerous concepts available in Python is essential in order to keep students focused. They should also motivated and should appreciate each newly mastered tool without too much memorization. Here are some specific questions: For instance, my predecessor introduced lists before strings. I think the opposite is a better solution. Should function definitions be introduced at the very beginning or after mastering basic structured programming ideas, such as decisions (if) and loops (while)? Should sets be introduced before dictionaries? Is it better to introduce reading and writing files early in the course or should one use input and print for most of the course? Any suggestions with explanations are most welcome.

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  • How do you keep application logic separate from UI when UI components have built-in functionality?

    - by Al C
    I know it's important to keep user interface code separated from domain code--the application is easier to understand, maintain, change, and (sometimes) isolate bugs. But here's my mental block ... Delphi comes with components with methods that do what I want, e.g., a RichText Memo component lets me work with rich text. Other components, like TMS's string grid not only do what I want, but I paid extra for the functionality. These features put the R in RAD. It seems illogical to write my own classes to do things somebody else has already done for me. It's reinventing the wheel [ever tried working directly with rich text? :-) ] But if I use the functionality built into components like these, then I will end up with lots of intermingled UI and domain code--I'll have a form with most of my code built into its event handlers. How do you deal with this issue? ... Or, if I want to continue using the code others have already written for me, how would you suggest I deal with the issue?

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  • Make: how make all hidden files in the current makefile?

    - by HH
    It traverses to bottom dirs for some unknown reason: Errorsome /bin/sh: .??*: not found make[23]: Entering directory `/m/user/files/dir' make clean Makefile all: make clean #The wildcard is the bug. I want to make all hidden files in the current makefile. #It should match .<some char><some char><any char arbitrary times> make $$(.??*) #I want to replace below-like-tihngs with a wildcard above # make .lambda # make .lambda_t clean: -rm .??* .lambda: #do something .lambda_t:

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  • How do Arrays work in C#?

    - by Slateboard
    I know that they are used to store data, but I have a difficult time understanding exactly how to use them in a program. In addition, I found this site with a tetris clone tutorial (the actual tutorial is missing). It uses arrays, but I can't really make sense of how it works. Here's an example of the code - public int[, ,] TShape = new int[4, 4, 2] { {{1, 0}, {0, 1}, {1, 1}, {2, 1}}, {{1, 0}, {0, 1}, {1, 1}, {1, 2}}, {{0, 0}, {1, 0}, {2, 0}, {1, 1}}, {{0, 0}, {0, 1}, {1, 1}, {0, 2}}}; Could it be that I'm looking too hard into this, or perhaps there's something I'm not grasping about it?

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  • How to handle array element between int and Integer

    - by masato-san
    First, it is long post so if you need clarification please let me know. I'm new to Java and having difficulty deciding whether I should use int[] or Integer[]. I wrote a function that find odd_number from int[] array. public int[] find_odd(int[] arr) { int[] result = new int[arr.length]; for(int i=0; i<arr.length; i++) { if(arr[i] % 2 != 0) { //System.out.println(arr[i]); result[i] = arr[i]; } } return result; } Then, when I pass the int[] array consisting of some integer like below: int[] myArray = {-1, 0, 1, 2, 3}; int[] result = find_odd(myArray); The array "result" contains: 0, -1, 0, 1, 0, 3 Because in Java you have to define the size of array first, and empty int[] array element is 0 not null. So when I want to test the find_odd() function and expect the array to have odd numbers (which it does) only, it throws the error because the array also includes 0s representing "empty cell" as shown above. My test code: public void testFindOddPassValidIntArray() { int[] arr = {-2, -1, 0, 1, 3}; int[] result = findOddObj.find_odd(arr); //check if return array only contain odd number for(int i=0; i<result.length; i++) { if(result[i] != null) { assert is_odd(result[i]) : result[i]; } } } So, my question is should I use int[] array and add check for 0 element in my test like: if(result[i] != 0) { assert is_odd(result[i] : result[i] } But in this case, if find_odd() function is broken and returning 0 by miscalculation, I can't catch it because my test code would only assume that 0 is empty cell. OR should I use Integer[] array whose default is null? How do people deal with this kind of situation?

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  • I'm having a problem identifying a floating point exception.

    - by Peter Stewart
    I'm using c++ in visual studio express to generate random expression trees for use in a genetic algorithm type of program. Because they are random, the trees often generate (I'll call them exceptions, I'm not sure what they are) Thanks to a suggestion by George, I turned the mask _MCW_EM on so that hardware interrupts are turned off. (the default) So, the program runs uninterrupted, but some of the values returned are: -1.#INF, -1.#NAN, -1.#INV. I don't know how to identify these so that I can throw an exeption: if ( variable == -1.#INF) ?? DigitalRoss in this post seemed to have the solution, but as I understood it I couldn't make it work. I've been looking all over the place for this simple bit of code, that I assumed would be used all the time, but have had no luck. thanks

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  • Generics List Interface...newb question

    - by newToProgramming
    The List interface is the following: public interface List<E>{ public boolean add(Object e); public boolean remove(Object e); public boolean contains(Object e); ...etc Why aren't the add, remove and contains methods written like the following? public boolean add(E e) public boolean remove(E e) public boolean contains(E e)

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  • As a PHP developer thinking of making Perl a secondary strong suit, what do I need to know?

    - by Hexagon Theory
    I consider myself quite fluent in PHP and am rather familiar with nearly all of the important aspects and uses, as well as its pratfalls. This in mind, I think the major problem in taking on Perl is going to be with the syntax. Aside from this (a minor hindrance, really, as I'm rather sold on the fact that Perl's is far more readable), what are some key differences you think I should make myself aware of prior to taking on the language?

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  • What are good resources for computer graphics basics?

    - by Hanno Fietz
    During Flex programming, I recently ran into several questions (about box models, ways to join lines and misaligning pixels [on doctype]) regarding computer graphics and layout, where I felt that I lacked some basic background on things like concepts like the box model approaches mapping real numbers to a pixel raster (like font anti-aliasing) conventions found across drawing engines, like do you count y coordinates from top or bottom, and why I feel that reading some basic Wikipedia articles, books or tutorials on these subjects might help in phrasing my questions more specifically and debugging my code more systematically. I have repeatedly found myself writing tiny test apps in Flex, just to find out how the APIs do very basic stuff. My assumption would be that if I knew the right vocabulary and some general concepts, I could solve these questions much faster.

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  • What is the best way to learn VB/VBA?

    - by Noah
    I have wanted to learn VB and VBA for a long time. My school offers a coarse, but it doesn't fit with the rest of my schedule. It will be my first programing language. I was considering using the textbook my school uses (An introduction to programing using visual basic 2008, but I wold get the 2010 version), but I was wondering if there were better resources I could use. I mainly want to lean to learn VBA so I cam create macros and other tools for MS Word. Please understand that this is the fist time I will be programming and I am teaching myself (with the books/online resources).

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