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• How can I make the output from tapply() into a data.frame

  - by James Thompson

  I have a data.frame in R that looks like this: score rms template aln_id description 1 -261.410 4.951 2f22A.pdb 2F22A_1 S_00001_0000002_0 2 -231.987 21.813 1wb9A.pdb 1WB9A_4 S_00002_0000002_0 3 -263.722 4.903 2f22A.pdb 2F22A_3 S_00003_0000002_0 4 -269.681 17.732 1wbbA.pdb 1WBBA_6 S_00004_0000002_0 5 -258.621 19.098 1rxqA.pdb 1RXQA_3 S_00005_0000002_0 6 -246.805 6.889 1rxqA.pdb 1RXQA_15 S_00006_0000002_0 7 -281.300 16.262 1wbdA.pdb 1WBDA_11 S_00007_0000002_0 8 -271.666 4.193 2f22A.pdb 2F22A_2 S_00008_0000002_0 9 -277.964 13.066 1wb9A.pdb 1WB9A_5 S_00009_0000002_0 10 -261.024 17.153 1yy9A.pdb 1YY9A_2 S_00001_0000003_0 I can calculate summary statistics on the data.frame like this: > tapply( d$score, d$template, mean ) 1rxqA.pdb 1wb9A.pdb 1wbbA.pdb 1wbdA.pdb 1yy9A.pdb 2f22A.pdb -252.7130 -254.9755 -269.6810 -281.3000 -261.0240 -265.5993 Is there an easy way that I coerce this output back into a data.frame? I'd like for it to have these two columns: d$template mean I love tapply, but right now I'm cutting and pasting the results from tapply into a text file and hacking it up a bit to get the summary statistics that I want with appropriate names. This feels very wrong, and I'd like to do something better!

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• rails migration. modify starting point for auto_increment

  - by railsnew

  I have a table already created. I am looking for a rails migration where I can modify the starting point of the auto_increment number for id column of my table. Let's say I want it to start from 1000. I googled a bit and came across this: it says: :options "string" pass raw options to your underlying database, e.g. auto_increment = 10000. Note that passing options will cause you to lose the default ENGINE=InnoDB statement Can this be used for something I want? and how will the migration look since i am changing the column and not creating new one...

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• Getting meaningful error messages from fstream's in C++

  - by Hassan Syed

  What is the best way to get meaningful file access error messages, in a portable way from std::fstreams ? The primitiveness of badbits and failbits is getting to be bit annoying. I have written my own exception hierarchies against win32 and POSIX before, and that was far more flexible than the way the STL does it. I am getting "basic::ios_clear" as an error message from the what method of a downcasted catch (std::exception) of a fstream which has exceptions enabled. This doesn't mean much to me, although I do know what the problem is I'd like my program to be a tad more informative so that when I start deployment a few months later my life will be easier. Is there anything in Boost to extract meaningful messages out of the ofstream's implementation cross platform and cross STL implementation ?

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• Non-Profit Volunteer Opportunities

  - by Sean

  I have seen questions on SO regarding volunteering for potential employers or volunteering to help out on open source projects. But what about putting your IT skills to use at traditional non-profit organizations as a volunteer? I would like to volunteer some time to a worthwhile cause in 2010, but am having a hard time finding organizations who may need IT help. Does anyone do this? Are there any websites out there to help one find organizations looking for such help? I would think some must have a need for free software development type work? I saw a bit on 'WeVolunteer' that publishes a database of volunteer opportunities (http://www.wetv.com/volunteer.html), but it seems to be more 'typical' volunteer opportunities (soup kitchens, walk-a-thons, etc).

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• How to convert a MooTools 'Scroll to Top' Script to jQuery

  - by Vikram

  Hello friends I have the following script in my Template: window.addEvent('domready', function () { var a = $('totop'); if (a) { var b = new Fx.Scroll(window); a.setStyle('outline', 'none').addEvent('click', function (e) { new Event(e).stop(); b.toTop() }) } }); I wanted this in jQuery as I don't want to load 2 libraries just for this bit of script. I am actually very new to programming and still in the learning stage. Hence looking forward for some help on this issue. Kindly Help.

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• CakePHP: How can I disable auto-increment on Model.id?

  - by tomws

  CakePHP 1.3.0, mysqli I have a model, Manifest, whose ID should be the unique number from a printed form. However, with Manifest.id set as the primary key, CakePHP is helping me by setting up auto-increment on the field. Is there a way to flag the field via schema.php and/or elsewhere to disable auto-increment? I need just a plain, old primary key without it. The only other solution I can imagine is adding on a separate manifest number field and changing foreign keys in a half dozen other tables. A bit wasteful and not as intuitive.

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• Get countries within range of LAT/LONG coordinates

  - by ptrn

  Trouble! I'm looking for a way to find the countries within a given range of LAT/LONG coordinates. E.g.: When viewing a place in Africa in Google Maps, I get out which countries that are in my current view. This is a bit ambitious, and I think the main problem will be dealing with accuracy of the needed polygons. The accuracy of these don't need to be all that great, the borders can probably be tens of miles off, or even more. This will be needed for the entire world.

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• Collection of dependencies in castle windsor

  - by jonnii

  I have the following scenario: public class FirstChildService : IChildService { } public class SecondChildService : IChildService { } public class MyService : IService { public MyService(IEnumerable<IChildService> childServices){ ... } } I'm currently registering all the child services and explicitly depending on them in the constructor of MyService, but what I'd like to do is have them all injected as part of a collection. I can think of a few ways to do this: Using a facility Using a component property Registering the collection as a service But all of them feel a bit... icky. What's the best way to manage this? Also, ideally I'd like to do this using the fluent API and constructor injection. I know it's possible to do something similar using properties: http://www.castleproject.org/container/documentation/trunk/usersguide/arrayslistsanddicts.html

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• NSTextField (Label) Attributed Text: Select

  - by huntaub

  I have a NSTextField Label that has attributed text in it. The color and size are different from the defaults. (The text is a bit larger and green) Now, I need to be able to select the text in the label so as the click the hyperlinks embedded in the attributed text. This works fine; however, when selecting the text the format of the text reverts back to the defaults (a smaller, black font). Is there anyway to stop this behavior so that my styling is preserved when the user clicks (selects text) on a Label?

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• Activating "pointer-events:none" only on section of image that overlaps

  - by Buckers

  I'm using pointer-events:none; on the main photograph at the top of my site http://www.onedirection.net/, to allow the user to select the navigation behind the image. However, I'd like to let the user click on each member of the band to go to a separate page, but ONLY for the parts of the image that don't overlap into the navigation. I'm a bit stuck with this. Can it be done? I was thinking of using an image map, but can't get it working without the navigation becoming "less clickable".

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• Prevent PHP sesison hijack, are these good ideas?

  - by matthew Rhodes

  I'm doing a simple shopping cart for a small site. I plan to store cart items as well as logged in user_id in session variables. to make things a little more secure, I thought I'd do this: sha1() the user_id before storing it in the session. Also sha1() and store the http_user_agent var with some salt, and check this along with the user_id. I know there is more one can do, but I thought this at least helps quite a bit right? and is easy for me to implement.

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• Simple "Hello World!" console application crashes when run by windows TaskScheduler (1.0)

  - by user326627

  I have a batch file which starts multiple instances of simple console application (Hello World!). I work on Windows server 2008 64-bit. I configure it to run in TaskScheduler, at startup, and whether user is logged-in or not. The later configuration means that the instances will run without GUI (i.e. - no window). When I run this task, some of the instances just fail, after consuming 100& CPU. Application event-log shows the following error: "Faulting module KERNEL32.dll, version 6.0.6002.18005, time stamp 0x49e0421d, exception code 0xc0000142, fault offset 0x00000000000b8fb8, process id 0x29bc, application start time 0x01cae17d94a61895." Running the batch file directly works just fine. It seems to me that the OS has a problem loading too many instances of the application when no window is displayed. However - I can’t figure out why... Any idea??

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• Rails architecture questions

  - by justinbach

  I'm building a Rails site that, among other things, allows users to build their own recipe repository. Recipes are entered either manually or via a link to another site (think epicurious, cooks.com, etc). I'm writing scripts that will scrape a recipe from these sites given a link from a user, and so far (legal issues notwithstanding) that part isn't giving me any trouble. However, I'm not sure where to put the code that I'm writing for these scraper scripts. My first thought was to put it in the recipes model, but it seems a bit too involved to go there; would a library or a helper be more appropriate? Also, as I mentioned, I'm building several different scrapers for different food websites. It seems to me that the elegant way to do this would be to define an interface (or abstract base class) that determines a set of methods for constructing a recipe object given a link, but I'm not sure what the best approach would be here, either. How might I build out these OO relationships, and where should the code go?

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• how to write floating value accurately to a bin file.

  - by user319873

  Hi I am trying to dump the floating point values from my program to a bin file. Since I can't use any stdlib function, I am thinking of writting it char by char to a big char array which I am dumping in my test application to a file. It's like float a=3132.000001; I will be dumping this to a char array in 4 bytes. Code example would be:- if((a < 1.0) && (a > 1.0) || (a > -1.0 && a < 0.0)) a = a*1000000 // 6 bit fraction part. Can you please help me writting this in a better way.

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• Need a push in the write direction, to write my first functional test in Rails?

  - by Jason

  Hi, I've read quiet a bit of documentation over the last few days about testing in Rails, I'm sitting down to write my first real test and not 100% sure how to tie what I have learned together to achieve the following functional test (testing a controller) I need to send a GET request to a URL and pass 3 parameters (simple web-service), if the functionality works the keyword "true" is simply returned, otherwise the keyword "false" is returned - its in only value returned & not contained in any , or other tags. The test should assert that if "true" is returned the test is successful. This is probably very simple so apologies for such a non-challenging question. If anyone could point me in the write direction on how I can get started, particularly how I can test the response, I'd be very grateful! Thanks!

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• Do you draw the entire object?

  - by vbman11

  Hi I'm working on learning 3d game development and I'm starting with JavaScript and the html5 canvas and I was wondering if I were to have a 3d model do I draw the entire model(front, back, etc) and let the web browser decide what to render or should I try to just draw the sides that are in view of the camera? I ask this because I can see how it would be faster to do the latter of the 2 but that can get very complex and I'll need to do quite a bit more research to find how to do that. Thanks!!

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• The easiest way to draw an image?

  - by Benno

  Assume you want to read an image file in a common file format from the hard drive, change the color of one pixel, and display the resulting image to the screen, in C++. Which (open-source) libraries would you recommend to accomplish the above with the least amount of code? Alternatively, which libraries would do the above in the most elegant way possible? A bit of background: I have been reading a lot of computer graphics literature recently, and there are lots of relatively easy, pixel-based algorithms which I'd like to implement. However, while the algorithm itself would usually be straightforward to implement, the necessary amount of frame-work to manipulate an image on a per-pixel basis and display the result stopped me from doing it.

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• Redirect to Apache built-in 404 page with mod_rewrite?

  - by Pekka

  Is there a way to actively serve Apache's default, built-in 404 page for a number of URLs using mod_rewrite? Not a custom error document, but a rule like RewriteCond %{REQUEST_URI} ^/dirname/pagename RewriteRule -- serve 404 page ----- I know how to build a PHP page that sends the 404 header and have mod_rewrite redirect all the URLs there but I would prefer a solution that is based on mod_rewrite only. I just had the idea of redirecting to a non-existent address: RewriteCond %{REQUEST_URI} ^/dirname/pagename RewriteRule .* /sflkadsölfkasdfölkasdflökasdf but that would give the user the message "/sflkadsölfkasdfölkasdflökasdf does not exist" on the error page, which looks a bit unprofessional.

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• Redirect to Apache default 404 page with mod_rewrite?

  - by Pekka

  Is there a way to actively serve Apache's default 404 page for a number of URLs using mod_rewrite? Not a custom error document, but a rule like RewriteCond %{REQUEST_URI} ^/dirname/pagename RewriteRule -- serve 404 page ----- I guess I could build a PHP page that sends the 404 header and have mod_rewrite redirect all the URLs there but I would prefer a solution that is based on mod_rewrite only. I just had the idea of redirecting to a non-existent address: RewriteCond %{REQUEST_URI} ^/dirname/pagename RewriteRule .* /sflkadsölfkasdfölkasdflökasdf but that would give the user the message "/sflkadsölfkasdfölkasdflökasdf does not exist" on the error page, which looks a bit unprofessional.

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• jQuery: move window viewport to show freshly toggled element

  - by k00k

  I have a simple bit of jQuery in doc ready which toggles a div containing a textarea: $('div#addnote-area').hide(); // hide the div $('a#addnote-link').click(function() { // click event listener on link $('div#addnote-area').toggle(); // toggle the hidden div }); The toggle works fine when clicking the link. The problem I'm having is that if div#addnote-area is below the browser's current viewport, it remains there when it's shown. I'd like the user's cursor to go to the textarea and for the whole textarea to be viewable in the window. Click here to see an image for more context

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• Showing custom model validation exceptions in the Django admin site.

  - by Guy Bowden

  I have a booking model that needs to check if the item being booked out is available. I would like to have the logic behind figuring out if the item is available centralised so that no matter where I save the instance this code validates that it can be saved. At the moment I have this code in a custom save function of my model class: def save(self): if self.is_available(): # my custom check availability function super(MyObj, self).save() else: # this is the bit I'm stuck with.. raise forms.ValidationError('Item already booked for those dates') This works fine - the error is raised if the item is unavailable, and my item is not saved. I can capture the exception from my front end form code, but what about the Django admin site? How can I get my exception to be displayed like any other validation error in the admin site?

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• Dynamic binary from file

  - by Aurel300

  This is a little bit of weird problem here. Say I have a C++ code, running on a specific platform. The only purpose of this code is to run files containing binary, NATIVE to that platform. Now - my question is - HOW would I get the data from these files (could even be by bits, like 1024 bits a cycle) to the memory of machine running my code so that this data would be in the execution part? In other words, can I get the data to somewhere where I can point the instruction pointer? If yes, how? I don't mind if I have to use assembler for this - just so it would work.

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• change color of red box on tri-state checkbox

  - by Adam S

  Hi all. I'm trying to get the green box that appears on the second click of a tri-state checkbox to be red, and also to fill up the box. I found an article here that demonstrates a little bit about using templates to do this: http://social.msdn.microsoft.com/Forums/en-US/wpf/thread/98cf8a65-f4ca-4ff5-9851-c2989b91a013 However, I can't figure out how to interpret all that. I only understand a few of the things in that template and don't know how to get my red box. Can anyone help, and also tell me how you knew what to do?

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• Hiding iAds when loading?

  - by Jesper Mansa

  I'm trying to make an ios app with an iAd in the bottom but lifted a little bit. It actually woks ok but when the iAd is loading it shows an white area just below where the iAd should be. When its done loading the iAd jumps up in the right position. I think normaly the button is loaded outside the screen and nthen pop ups when done but because mine add is liftet a little I can see the loading area... Is there a way to make the iAd load in the sides instead and then popin from the side? Here is what I have so far: frame.origin.x = ( _screenWidth - frame.size.width ) / 2; if( calculateForBannerOnBottom ) frame.origin.y = _screenHeight - (frame.size.height/1.2); else frame.origin.y = -_adView.frame.size.height+(frame.size.height/2.4); Hoping 4 help and thanks in advance :-)

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• Which jQuery/css menu library for working with ASP.NET TreeView or Menu controls.

  - by ProfK

  I'm looking for a good jQuery or CSS, or combo, library to enance my left side menu in an an intranet application. I don't like the 'hover only' expand/collapse style of the ASP.NET Menu control on its own, and I don't like the 'icon-click only' expand/collapse style of the TreeView control on its own. I plan on trying the CSS Control Adapters, to render the menu with some self-respect, i.e. as nested <ul> or <ol> elements instead of the usual orgy of tables. Beyond that, I need something to give a bit of style and menulike behaviour to these nested lists, and I would prefer a jQuery plugin for this. Which should I use?

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