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  • What can cause kernel out_of_memory error?

    - by nbolton
    I'm running Debian GNU/Linux 5.0 and I'm experiencing intermittent out_of_memory errors coming from the kernel. The server stops responding to all but pings, and I have to reboot the server. # uname -a Linux xxx 2.6.18-164.9.1.el5xen #1 SMP Tue Dec 15 21:31:37 EST 2009 x86_64 GNU/Linux This seems to be the important bit from /var/log/messages Dec 28 20:16:25 slarti kernel: Call Trace: Dec 28 20:16:25 slarti kernel: [<ffffffff802bedff>] out_of_memory+0x8b/0x203 Dec 28 20:16:25 slarti kernel: [<ffffffff8020f825>] __alloc_pages+0x245/0x2ce Dec 28 20:16:25 slarti kernel: [<ffffffff8021377f>] __do_page_cache_readahead+0xc6/0x1ab Dec 28 20:16:25 slarti kernel: [<ffffffff80214015>] filemap_nopage+0x14c/0x360 Dec 28 20:16:25 slarti kernel: [<ffffffff80208ebc>] __handle_mm_fault+0x443/0x1337 Dec 28 20:16:25 slarti kernel: [<ffffffff8026766a>] do_page_fault+0xf7b/0x12e0 Dec 28 20:16:25 slarti kernel: [<ffffffff8026ef17>] monotonic_clock+0x35/0x7b Dec 28 20:16:25 slarti kernel: [<ffffffff80262da3>] thread_return+0x6c/0x113 Dec 28 20:16:25 slarti kernel: [<ffffffff8021afef>] remove_vma+0x4c/0x53 Dec 28 20:16:25 slarti kernel: [<ffffffff80264901>] _spin_lock_irqsave+0x9/0x14 Dec 28 20:16:25 slarti kernel: [<ffffffff8026082b>] error_exit+0x0/0x6e Full snippet here: http://pastebin.com/a7eWf7VZ I thought that perhaps the server was actually running out of memory (it has 1GB physical memory), but my Cacti memory graph looks OK to me... But strangely the load graph goes through the roof shortly before the kernel crashes: What logs can I look at for more info? Update: Maybe noteworthy - the CPU percentage and network traffic graphs were both normal at the time of the crash. The only abnormality was the average load graph.

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  • SSL connection hangs as client hello (curl, openssl client, apt-get, wget, everything)

    - by Niklas B
    Hi, I've run into a problem on my Debian VPS (a xen domU) regarding SSL. Namely almost all SSL connections hangs at client hello. For example: # curl -vI https://graph.facebook.com About to connect() to graph.facebook.com port 443 (#0) Trying 66.220.146.48... connected Connected to graph.facebook.com (66.220.146.48) port 443 (#0) successfully set certificate verify locations: CAfile: none CApath: /etc/ssl/certs SSLv3, TLS handshake, Client hello (1): It's the same when using the openssl client. However, some of the SSL traffic works (for example https://www.nordea.se). Server #uname -a Linux server.com 2.6.26-1-xen-amd64 #1 SMP Fri Mar 13 21:39:38 UTC 2009 x86_64 GNU/Linux It does however work on my Dom 0 (the main xen host). Apt-get I can't even run apt-get update with the debian security sources (hangs on reading headers) Open SSL At the begining I thought I had an old openssl client (0.9.8o-4) since I appeared to have a newer on the Dom 0 (0.9.8g-15+lenny8) but doing a manuanl update on the openssl deb didn't help. Open SSL Client This is the full output of when the openssl client hangs: http://pastebin.com/PAjwMap9 Closing thoughts I've Googled the crap out of this, and I'm not getting any further. I've seen problems with curl, apt-get etc. but they are all specific relating to the very application - not general for the system. Any thoughts?

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  • The plugin of munin is always timed out

    - by haoX
    I want to use munin to make a graph of ttyACM0 in Linux, but munin can not create the graph. I found some information in "munin-node.log". it shows that "Service 'temperature' timed out". So I changed timeout to 60 or 120 in /munin/plugin-conf.d/munin-node, but it does not work. It's also timed out. Here is part of my code: if [ "$1" = "config" ]; then echo 'graph_title Temperature of board' echo 'graph_args --base 1000 -l 0' echo 'graph_vlabel temperature(°C)' echo 'graph_category temperature' echo 'graph_scale no' echo 'graph_info This graph shows the temperature of board' for i in 1 2 3 4 5; do case $i in 1) TYPE="Under PCB" ;; 2) TYPE="HDD" ;; 3) TYPE="PHY" ;; 4) TYPE="CPU" ;; 5) TYPE="Ambience" ;; esac name=$(clean_name $TYPE) if [ "$TYPE" != "NA" ]; then echo "temp_$name.label $TYPE"; fi done exit 0 fi for i in 1 2 3 4 5; do case $i in 1) TYPE="Under PCB" VALUE=$(head -1 /dev/ttyACM0 | awk '{print $1}') ;; 2) TYPE="HDD" VALUE=$(head -1 /dev/ttyACM0 | awk '{print $2}') ;; 3) TYPE="PHY" VALUE=$(head -1 /dev/ttyACM0 | awk '{print $3}') ;; 4) TYPE="CPU" VALUE=$(head -1 /dev/ttyACM0 | awk '{print $4}') ;; 5) TYPE="Ambience" VALUE=$(head -1 /dev/ttyACM0 | awk '{print $5}') ;; esac name=$(clean_name $TYPE) if [ "$TYPE" != "NA" ]; then echo "temp_$name.value $VALUE" fi

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  • Easily Plotting Multiple Data Series in Excel

    - by John
    I really need help figuring out how to speed up graphing multiple series on a graph. I have seperate devices that give monthly readings for several variables like pressure, temperature, and salinity. Each of these variables is going to be its own graph with devices being the series. My x-axis is going to be the dates that these values were taken. The problem is that it takes ages to do this for each spreadsheet since I have monthly dates from 1950 up to the present and I have about 50 devices in each spreadsheet. I also have graphs for calculated values that are in columns next to them. Each of these devices is going to become a data series in the graph. E.g. In one of my graphs I have all the pressures from the devices and each of the data series' names is the name of the device. I want a fast way to do this. Doing this manually is taking a very long time. Please help! Is there any easier way to do this? It is consistent and the dates all line up. I am just repeating the same clicks over and over again Thank you!

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  • Memory mapped files and "soft" page faults. Unavoidable?

    - by Robert Oschler
    I have two applications (processes) running under Windows XP that share data via a memory mapped file. Despite all my efforts to eliminate per iteration memory allocations, I still get about 10 soft page faults per data transfer. I've tried every flag there is in CreateFileMapping() and CreateFileView() and it still happens. I'm beginning to wonder if it's just the way memory mapped files work. If anyone there knows the O/S implementation details behind memory mapped files I would appreciate comments on the following theory: If two processes share a memory mapped file and one process writes to it while another reads it, then the O/S marks the pages written to as invalid. When the other process goes to read the memory areas that now belong to invalidated pages, this causes a soft page fault (by design) and the O/S knows to reload the invalidated page. Also, the number of soft page faults is therefore directly proportional to the size of the data write. My experiments seem to bear out the above theory. When I share data I write one contiguous block of data. In other words, the entire shared memory area is overwritten each time. If I make the block bigger the number of soft page faults goes up correspondingly. So, if my theory is true, there is nothing I can do to eliminate the soft page faults short of not using memory mapped files because that is how they work (using soft page faults to maintain page consistency). What is ironic is that I chose to use a memory mapped file instead of a TCP socket connection because I thought it would be more efficient. Note, if the soft page faults are harmless please note that. I've heard that at some point if the number is excessive, the system's performance can be marred. If soft page faults intrinsically are not significantly harmful then if anyone has any guidelines as to what number per second is "excessive" I'd like to hear that. Thanks.

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  • Facebook Oauth Logout

    - by Derek Troy-West
    I have an application that integrates with Facebook using Oauth 2. I can authorize with FB and query their REST and Graph APIs perfectly well, but when I authorize an active browser session is created with FB. I can then log-out of my application just fine, but the session with FB persists, so if anyone else uses the browser they will see the previous users FB account (unless the previous user manually logs out of FB also). The steps I take to authorize are: Call [LINK: graph.facebook.com/oauth/authorize?client_id...] This step opens a Facebook login/connect window if the user's browser doesn't already have an active FB session. Once they log-in to facebook they redirect to my site with a code I can exchange for an oauth token. Call [LINK: graph.facebook.com/oauth/access_token?client_id..] with the code from (1) Now I have an Oauth Token, and the user's browser is logged into my site, and into FB. I call a bunch of APIs to do stuff: i.e. [LINK: graph.facebook.com/me?access_token=..] Lets say my user wants to log out of my site. The FB terms and conditions demand that I perform Single Sign Off, so when the user logs out of my site, they also are logged out of Facebook. There are arguments that this is a bit daft, but I'm happy to comply if there is any way of actually achieving that. I have seen suggestions that: A. I use the Javascript API to logout: FB.Connect.logout(). Well I tried using that, but it didn't work, and I'm not sure exactly how it could, as I don't use the Javascript API in any way on my site. The session isn't maintained or created by the Javascript API so I'm not sure how it's supposed to expire it either. B. Use [LINK: facebook.com/logout.php]. This was suggested by an admin in the Facebook forums some time ago. The example given related to the old way of getting FB sessions (non-oauth) so I don't think I can apply it in my case. C. Use the old REST api expireSession or revokeAuthorization. I tried both of these and while they do expire the Oauth token they don't invalidate the session that the browser is currently using so it has no effect, the user is not logged out of Facebook. I'm really at a bit of a loose end, the Facebook documentation is patchy, ambiguous and pretty poor. The support on the forums is non-existant, at the moment I can't even log in to the facebook forum, and aside from that, their own FB Connect integration doesn't even work on the forum itself. Doesn't inspire much confidence. Ta for any help you can offer. Derek ps. Had to change HTTPS to LINK, not enough karma to post links which is probably fair enough.

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  • ext-js chart, multiple series on same chart

    - by user121196
    Ext-js Chart, I have a line graph, and I wish to add a single line(eg. average line) to the graph. The only way I can think of to emulate this line is to do the following: add an extra field with identical value to all my data points if, but this seems to be a waste and plus I don't want to show the dots that comes with the line. is there anyway to add an average line to my existing chart?

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  • Clever ways of implementing different data structures in C & data structures that should be used mor

    - by Yktula
    What are some clever (not ordinary) ways of implementing data structures in C, and what are some data structures that should be used more often? For example, what is the most effective way (generating minimal overhead) to implement a directed and cyclic graph with weighted edges in C? I know that we can store the distances in an array as is done here, but what other ways are there to implement this kind of a graph?

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  • Show frequencies along with barplot in ggplot2

    - by aL3xa
    I'm trying to display frequencies within barplot ... well, I want them somewhere in the graph: under the bars, within bars, above bars or in the legend area. And I recall (I may be wrong) that it can be done in ggplot2. This is probably an easy one... at least it seems easy. Here's the code: p <- ggplot(mtcars) p + aes(factor(cyl)) + geom_bar() Is there any chance that I can get frequencies embedded in the graph?

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  • dz's Open Flash Chart 2 disabling animation problem (Rails)

    - by greg
    How to disable the startup animation in OFC2? Since I started using the dz build, the on-show animation is on by default, which sucks quite a lot. Neither of these work: graph.animate=false graph.on_show=false Also, dz's build implements the tooltip hover support poorly - the tooltip continues to hover even when the cursor is on another flash object. Has anyone overcome these problems?

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  • Java JGraph subgraph

    - by Jeff Storey
    Is there a way to create a subgraph from a full graph in JGraph? When I update the subgraph, I want changes to propagate to the main graph. Does JGraph provide a relatively easy way for doing that out of the box (I couldn't seem to find one...)? thanks, Jeff

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  • JFreeChart in scrollpane

    - by Fortega
    Hi, I'm having a big graph created with jfreechart. This chart is too big for the screen, so I would like to put it in a scrollpane. However, when using the scrollbar, the complete graph is redrawn everytime, which makes it extremely slow. Is there a solution for this? thanks, Bart

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  • Difficulties getting GraphViz working as a library in C++

    - by DistortedLojik
    Am working on a program that will allow a graph of nodes to be displayed and then updated visually as the nodes themselves are updated. I am fairly new to Visual Studio 2010 and am following the GraphViz guide located at http://www.graphviz.org/pdf/libguide.pdf in order to get GraphViz working as a library. I have the following code which is taken straight from the pdf linked above. #include <graphviz\gvc.h> #include <graphviz\cdt.h> #include <graphviz\graph.h> #include <graphviz\pathplan.h> using namespace std; int main(int argc, char **argv) { Agraph_t *g; Agnode_t *n, *m; Agedge_t *e; Agsym_t *a; GVC_t *gvc; /* set up a graphviz context */ gvc = gvContext(); /* parse command line args - minimally argv[0] sets layout engine */ gvParseArgs(gvc, argc, argv); /* Create a simple digraph */ g = agopen("g", AGDIGRAPH); n = agnode(g, "n"); m = agnode(g, "m"); e = agedge(g, n, m); /* Set an attribute - in this case one that affects the visible rendering */ agsafeset(n, "color", "red", ""); /* Compute a layout using layout engine from command line args */ gvLayoutJobs(gvc, g); /* Write the graph according to -T and -o options */ gvRenderJobs(gvc, g); /* Free layout data */ gvFreeLayout(gvc, g); /* Free graph structures */ agclose(g); /* close output file, free context, and return number of errors */ return (gvFreeContext(gvc)); } After compiling I get the following errors which indicate that I do not have it correctly linked. 1>main.obj : error LNK2019: unresolved external symbol _gvFreeContext referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _agclose referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _gvFreeLayout referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _gvRenderJobs referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _gvLayoutJobs referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _agsafeset referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _agedge referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _agnode referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _agopen referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _gvParseArgs referenced in function _main 1>main.obj : error LNK2019: unresolved external symbol _gvContext referenced in function _main Within the VC++ Directories I have C:\Program Files (x86)\Graphviz2.26.3\include in the Include Directories and C:\Program Files (x86)\Graphviz2.26.3\lib\release\lib in the Library Directories Any help would be greatly appreciated to help get this working. Thank you.

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  • DirectShow.NET opening any file that Windows Media Player can open

    - by vucetica
    Here is a code snippet from DirectShowNet library, used to open a video file: this.graphBuilder = (IGraphBuilder) new FilterGraph(); // Have the graph builder construct its the appropriate graph automatically hr = this.graphBuilder.RenderFile(filename, null); but the RenderFile method fails. At the same time, Windows Media Player opens the same file nicely. What can be the problem. I got the same behavior without DirectShowNet, but using native C++ code...

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  • Invoke Python modules from Java

    - by user36813
    I have a Python interface of a graph library written in C - igraph (the name of library). My need is to invoke the python modules pertaining to this graph library from Java code. It goes like this, the core of library is in c. This core has been imported into Python and interfaces to the functions embedded in core are available in Python. My project's rest of the code is in Java and hence I would like to call the graph functions by Java as well. Jython - which lets you invoke python modules with in Java was an option.I went on trying Jython to discover that it will not work in my case as the core code is in C and Jython wont support anything that is imported as a c dll in python code.I also thought of opting for the approach of calling graph routines directly in c. That is without passing through Python code. I am assuming there must be something which lets you call c code from Java, how ever I am not good in C hence I did not go for it. My last resort seems to execute Python interpreter from command line using Java. But that is a dirty and shameless. Also to deal with the results produced by Python code I will have to write the results in a file and read it back in java. Again dirty way. Is there something that any one can suggest me? Thanks to every one giving time. Thanks Igal for answering. I had a look at it. At first glance it appears as if it is simply calling the python script. Jep jep = new Jep(false, SCRIPT_PATH, cl); jep.set("query", query); jep.runScript(SCRIPT_PATH + file); jep.close(); Isnt it very similar to what we would do if called the python interpreter from command line through a Java code. Runtime runtime = Runtime.getRuntime(); Process proc = runtime.exec("python test.py"); Concern is how do I use the results generated by Python script. The naive way is to write them to file and read it back in Java. I am searching for a smarter approach.Thanks for suggestion anyway.

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  • Mailer issue, PHP values do not change

    - by Roland
    I have a script that runs once every month and send out stats to clients, now the stats are displayed in normal text and in the shape of a Pie Graph, now if I run the script mannually from the command line all info on the graphs are correct, but when the cron job executes the script the values for the first client are displaying on the graphs of all clients. but the text is correct. I'm using domDocument to build the HTML and PHPMailer to send out the email with the Graphs embedded into the mail also use pChart to generate the Graph My code that generates the PIE graph is below include_once "pChart.1.26e/pChart/pData.class"; include_once "pChart.1.26e/pChart/pChart.class"; // Dataset definition unset($DataSet); $DataSet = new pData; $DataSet->AddPoint(array($data['total_clicks'],$remaining),"Serie1"); if($remaining < 0){ $DataSet->AddPoint(array("Clicks delivered todate","Clicks remaining = 0"),"Serie2"); }else{ $DataSet->AddPoint(array("Clicks delivered todate","Clicks remaining"),"Serie2"); } $DataSet->AddAllSeries(); $DataSet->SetAbsciseLabelSerie("Serie2"); // Initialise the graph $pie = new pChart(492,292); $pie->drawBackground(255,255,254); $pie->LineWidth = 1.1; $pie->Values = 2; // $pie->drawRoundedRectangle(5,5,375,195,5,230,230,230); //$pie->drawRectangle(0,0,480,288,169,169,169); $pie->drawRectangle(5,5,487,287,169,169,169); $pie->loadColorPalette('pChart.1.26e/color/tones-3.txt',','); // Draw the pie chart $pie->setFontProperties("pChart.1.26e/Fonts/calibrib.ttf",18); $pie->drawTitle(140,33,"Campaign Overview",0,0,0); $pie->setFontProperties("pChart.1.26e/Fonts/calibrib.ttf",11); $pie->drawTitle(343,125,"Total clicks : ".$total_clicks,0,0,0); $pie->setFontProperties("pChart.1.26e/Fonts/calibri.ttf",10); if($remaining < 0){ $pie->setFontProperties("pChart.1.26e/Fonts/calibrib.ttf",10); $pie->drawTitle(260,250,"Campaign over-delivered by ".substr($remaining,1)." clicks",205,53,53); $pie->setFontProperties("pChart.1.26e/Fonts/calibri.ttf",10); } $pie->drawPieLegend(328,140,$DataSet->GetData(),$DataSet->GetDataDescription(),255,255,255); $pie->drawPieGraph($DataSet->GetData(),$DataSet->GetDataDescription(),170,150,130,PIE_VALUE,FALSE,50,30,0); $pie->Render("generated/3dpie.png"); unset($pie); unset($DataSet); $mail->AddEmbeddedImage("/var/www/html/stats/generated/3dpie.png","5"); I just can't understand why this only happens when the cronjob runs?

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  • Matplotlib: plotting discrete values

    - by Arkapravo
    I am trying to plot the following ! from numpy import * from pylab import * import random for x in range(1,500): y = random.randint(1,25000) print(x,y) plot(x,y) show() However, I keep getting a blank graph (?). Just to make sure that the program logic is correct I added the code print(x,y), just the confirm that (x,y) pairs are being generated. (x,y) pairs are being generated, but there is no plot, I keep getting a blank graph. Any help ?

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  • How do I set selection to Nothing when programming Excel using VBA?

    - by Curt
    When I create a graph after using range.copy and range.paste it leaves the paste range selected, and then when I create a graph a few lines later, it uses the selection as the first series in the plot. I can delete the series, but is there a more elegant way to do this? I tried Set selection = nothing but it won't let me set selection. I also tried selection.clear, but that just cleared the last cells that were selected, and still added an extra series to the plot. Curt

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  • python cairoplot store previous readings..

    - by krisdigitx
    hi, i am using cairoplot, to make graphs, however the file from where i am reading the data is growing huge and its taking a long time to process the graph is there any real-time way to produce cairo graph, or at least store the previous readings..like rrd. -krisdigitx

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  • Two loops speeds drawing in a Jframe

    - by noahn567
    I have a program that requires two classes. The player-Names class, and the Player-Model class. I want the player-Names class to repaint every half second, and the Player-Model class to repaint 60 times per second because i want the movement to be smooth. The problem that i am having is that i want all of this to be done on one J-frame. How would i go about doing this? If you could lead me in the right direction or give me a little example that would be great! Thank you :). for some reason it wont let me post so i'm going to put in some random code import java.awt.Color; import java.awt.Font; import java.awt.Graphics; import java.awt.Graphics2D; import java.awt.RenderingHints; import javax.swing.JComponent; import javax.swing.JFrame; public class PlayerNames extends JFrame { static int connectionTimer = 0; static int connectionTimer2 = 0; static int reconnect = 0; static int reconnectValue = 1; static int x = 0; static int reconnectWait = connectionTimer + reconnectValue; private static final long serialVersionUID = 1L; public graph gg = new graph(); public graph g = new graph(); private static GameClient socketClient; private GameServer socketServer; public static void main(int width, int height) { PlayerNames tt = new PlayerNames(); // PlayerGraphics t = new PlayerGraphics(); tt.setSize(width, height); if (Game.ServerOwner == 1) { tt.setTitle("Server: " + Game.username); } else { tt.setTitle("Username: " + Game.username); } tt.setVisible(true); tt.getContentPane().add(tt.gg); tt.getContentPane().add(tt.g); tt.setDefaultCloseOperation(EXIT_ON_CLOSE); tt.setResizable(false); }

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  • Evaluating and graphing functions in Matlab

    - by thiol3
    New to programming, I am trying to graph the following Gaussian function in Matlab (should graph in 3 dimensions) but am making some mistakes somewhere. What is wrong? sigma = 1 for i = 1:20 for j = 1:20 z(i,j) = (1/(2*pi*sigma^2))*exp(-(i^2+j^2)/(2*sigma^2)); end end surf(z)

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  • Can I use Linq-to-xml to persist my object state without having to use/know Xpath & XSD Syntax?

    - by Greg
    Hi, Can I use Linq-to-xml to persist my object state without having to use/know Xpath & XSD Syntax? ie. really looking for simple but flexible way to persist a graph of object data (e.g. have say 2 or 3 classes with associations) - if Linq-to-xml were as simple as saying "persist this graph to XML", and then you could also query it via Linq, or load it into memory again/change/then re-save to the xml file.

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  • core plot error?

    - by senthilmuthu
    hi, i am using core plot framework,when i run following code in viewdidload gives crash.the view is as custom view... graph = [(CPXYGraph *)[CPXYGraph alloc] initWithFrame:CGRectZero]; CPLayerHostingView *hostingView = (CPLayerHostingView *)self.view; hostingView.hostedLayer = graph;**(gives error)** what i have to do? any help please?

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