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  • Python KMeans clustering words

    - by sadawd
    Dear Everyone I am interested to perform kmeans clustering on a list of words with the distance measure being Leveshtein. 1) I know there are a lot of frameworks out there, including scipy and orange that has a kmeans implementation. However they all require some sort of vector as the data which doesn't really fit me. 2) I need a good clustering implementation. I looked at python-clustering and realize that it doesn't a) return the sum of all the distance to each centroid, and b) it doesn't have any sort of iteration limit or cut off which ensures the quality of the clustering. python-clustering and the clustering algorithm on daniweb doesn't really work for me. Can someone find me a good lib? Google hasn't been my friend

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  • Clear command line output from Python [Eclipse]

    - by Tomas Lycken
    I'm using Eclipse for writing Python, and I want to be able to easily clear the screen. I've seen this question, and tried (among other things suggested there) the following solution import os def clear(): os.system('cls' if os.name == 'nt' else 'clear') but it doesn't entirely solve my problem. Instead of clearing the screen, the routine prints a small square (as if wanting to print an unknown character) to the command output window in Eclipse. Typing cls in the command line works perfectly fine, as does running a Python script with the above code from command line. But how can I make it look nice in Eclipse as well?

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  • Parsing JSON file with Python -> google map api

    - by Hannes
    Hi all, I am trying to get started with JSON in Python, but it seems that I misunderstand something in the JSON concept. I followed the google api example, which works fine. But when I change the code to a lower level in the JSON response (as shown below, where I try to get access to the location), I get the following error message for code below: Traceback (most recent call last): File "geoCode.py", line 11, in test = json.dumps([s['location'] for s in jsonResponse['results']], indent=3) KeyError: 'location' How can I get access to lower information level in the JSON file in python? Do I have to go to a higher level and search the result string? That seems very weird to me? Here is the code I have tried to run: import urllib, json URL2 = "http://maps.googleapis.com/maps/api/geocode/json?address=1600+Amphitheatre+Parkway,+Mountain+View,+CA&sensor=false" googleResponse = urllib.urlopen(URL2); jsonResponse = json.loads(googleResponse.read()) test = json.dumps([s['location'] for s in jsonResponse['results']], indent=3) print test Thank you for your responses.

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  • running pdb from within pdb

    - by Andrew Farrell
    I'm debugging an script that I'm writing and the result of executing a statement from pdb does not make sense so my natural reaction is to try to trace it with pdb. To paraphrase: Yo dawg, I like python, so can you put my pdb in my pdb so I can debug while I debug?

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  • Binomial test in Python

    - by Morlock
    I need to do a binomial test in Python that allows calculation for 'n' numbers of the order of 10000. I have implemented a quick binomial_test function using scipy.misc.comb, however, it is pretty much limited around n = 1000, I guess because it reaches the biggest representable number while computing factorials or the combinatorial itself. Here is my function: from scipy.misc import comb def binomial_test(n, k): """Calculate binomial probability """ p = comb(n, k) * 0.5**k * 0.5**(n-k) return p How could I use a native python (or numpy, scipy...) function in order to calculate that binomial probability? If possible, I need scipy 0.7.2 compatible code. Many thanks!

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  • What are the common programming mistakes in Python?

    - by Paul McGuire
    I was about to tag the recent question in which the OP accidentally shadowed the builtin operator module with his own local operator.py with the "common-mistakes" tag, and I saw that there are a number of interesting questions posted asking for common mistakes to avoid in Java, Ruby, Scala, Clojure, .Net, jQuery, Haskell, SQL, ColdFusion, and so on, but I didn't see any for Python. For the benefit of Python beginners, can we enumerate the common mistakes that we have all committed at one time or another, in the hopes of maybe steering a newbie or two clear of them? (In homage to "The Princess Bride", I call these the Classic Blunders.) If possible, a little supporting explanation on what the problem is, and the generally accepted resolution/workaround, so that the beginning Pythoner doesn't read your answer and say "ok, that's a mistake, how do I fix it?"

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  • Python subprocess: callback when cmd exits

    - by Anon
    Hi, I'm currently launching a programme using subprocess.Popen(cmd, shell=TRUE) I'm fairly new to Python, but it 'feels' like there ought to be some api that lets me do something similar to: subprocess.Popen(cmd, shell=TRUE, postexec_fn=function_to_call_on_exit) I am doing this so that function_to_call_on_exit can do something based on knowing that the cmd has exited (for example keeping count of the number of external processes currently running) I assume that I could fairly trivially wrap subprocess in a class that combined threading with the Popen.wait() method, but as I've not done threading in Python yet and it seems like this might be common enough for an API to exist, I thought I'd try and find one first. Thanks in advance :)

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  • Python Closures Example Code

    - by user336527
    I am learning Python using "Dive Into Python 3" book. I like it, but I don't understand the example used to introduce Closures in Section 6.5. I mean, I see how it works, and I think it's really cool. But I don't see any real benefit: it seems to me the same result could be achieved by simply reading in the rules file line by line in a loop, and doing search / replace for each line read. Could someone help me to: either understand why using closures in this example improves the code (e.g., easier to maintain, extend, reuse, or debug?) or suggest a source of some other real-life code examples where closures really shine? Thank you!

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  • Inserting multiple types into an SQLite database with Python

    - by mankoff
    I'm trying to create an SQLite 3 database from Python. I have a few types I'd like to insert into each record: A float, and then 3 groups of n floats, currently a tuple but could be an array or list.. I'm not well-enough versed in Python to understand all the differences. My problem is the INSERT statement. DAS = 12345 lats = (42,43,44,45) lons = (10,11,12,13) times = (1,2,3,4,5,6,7,8,9) import sqlite3 connection = sqlite3.connect("test.db") cursor = connection.cursor() cursor.execute( "create table foo(DAS LONG PRIMARY KEY,lats real(4),lons real(4), times real(9) )" ) I'm not sure what comes next. Something along the lines of: cmd = 'INSERT into foo values (?,?,?,?), ..." cursor.execute(cmd) How should I best build the SQL insert command given this data?

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  • How to embed a Python interpreter in a PyQT widget

    - by Mathias
    I want to be able to bring up an interactive python terminal from my python application. Some, but not all, variables in my program needs to be exposed to the interpreter. Currently I use a sub-classed and modified QPlainTextEdit and route all "commands" there to eval or exec, and keep track of a separate namespace in a dict. However there got to be a more elegant and robust way! How? Here is an example doing just what I want, but it is with IPython and pyGTK... http://ipython.scipy.org/moin/Cookbook/EmbeddingInGTK

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  • trying to use code_swarm but Im having some python scripting problems

    - by theprojectabot
    I am having issues running this: link-mbp:codeswarm-0.1 benb$ python convert_logs/convert_logs.py -perforce-path Traceback (most recent call last): File “convert_logs/convert_logs.py”, line 408, in main() File “convert_logs/convert_logs.py”, line 350, in main files = run_marshal(’p4 -G describe -s “‘ + changelist['change'] + ‘”‘) KeyError: ‘change’ link-mbp:codeswarm-0.1 benb$ I am trying to use code_swarm from this link http://blog.perforce.com/blog/?p=780&cpage=1#comment-965 to visualize my codebase changes. if I run p4 changes everything shows correct but the code in this python script doesnt seem to process correctly... if I run p4 describe on a a changelist number it correctly reports ideas?

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  • python Illegal instruction on AIX5.2

    - by Charlie Epps
    hi,everyone: I run my python script functions like this: read from a text file, and store the data as dict. But when in the loop, an Illegal instruction occurs. why this happens? the psu-code is : d={} datafile=open('a.txt') # a big text file for line in datafile: line=line.rstrip('\n') for token in line.split(): print("Parsing line %d." % token[0]) d[(int(token[0]))]=token[1:] then the message is like this: Parsing line 1. Parsing line 2. ............ Parsing line 1065 Illegal instruction what's the problem? my platform is python 2.6.2 on AIX 5.2. please help me, thanks!

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  • TypeError: Python thinks that I passed a function 2 arguments but I only passed it 1

    - by slhck
    I work on something in Seattle Repy which is a restricted subset of Python. Anyway, I wanted to implement my own Queue that derives from a list: class Queue(list): job_count = 0 def __init__(self): list.__init__(self) def appendleft(item): item.creation_time = getruntime() item.current_count = self.job_count self.insert(0, item) def pop(): item = self.pop() item.pop_time = getruntime() return item Now I call this in my main server, where I use my own Job class to pass Jobs to the Queue: mycontext['queue'] = Queue() # ... job = Job(str(ip), message) mycontext['queue'].appendleft(job) The last line raises the following exception: Exception (with type 'exceptions.TypeError'): appendleft() takes exactly 1 argument (2 given) I'm relatively new to Python, so could anyone explain to me why it would think that I gave appendleft() two arguments when there obviously was only one?

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  • Python sys.argv lists and indexes

    - by Fred Gerbig
    In the below code I understand that sys.argv uses lists, however I am not clear on how the index's are used here. def main(): if len(sys.argv) >= 2: name = sys.argv[1] else: name = 'World' print 'Hello', name if __name__ == '__main__': main() If I change name = sys.argv[1] to name = sys.argv[0] and type something for an argument it returns: Hello C:\Documents and Settings\fred\My Documents\Downloads\google-python-exercises \google-python-exercises\hello.py Which kind of make sense. Can someone explain how the 2 is used here: if len(sys.argv) >= 2: And how the 1 is used here: name = sys.argv[1]

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  • python sax error "junk after document element"

    - by user293487
    Hi, I use python sax to parse xml file. The xml file is actually a combination of multiple xml files. It looks like as follows: <row name="abc" age="40" body="blalalala..." creationdate="03/10/10" /> <row name="bcd" age="50" body="blalalala..." creationdate="03/10/09" /> My python code is in the following. It show "junk after document element" error. Any good idea to solve this problem. Thanks. from xml.sax.handler import ContentHandler from xml.sax import make_parser,SAXException import sys class PostHandler (ContentHandler): def __init__(self): self.find = 0 self.buffer = '' self.mapping={} def startElement(self,name,attrs): if name == 'row': self.find = 1 self.body = attrs["body"] print attrs["body"] def character(self,data): if self.find==1: self.buffer+=data def endElement(self,name): if self.find == 1: self.mapping[self.body] = self.buffer print self.mapping parser = make_parser() handler = PostHandler() parser.setContentHandler(handler) try: parser.parse(open("2.xml")) except SAXException:

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  • simple python file writing question

    - by aharon
    I'm learning Python, and have run into a bit of a problem. On my OSX install of Python 3.1, this happens in the console: >>> filename = "test" >>> reader = open(filename, 'r') >>> writer = open(filename, 'w') >>> reader.read() '' >>> writer.write("hello world\n") 12 >>> reader.read() '' And calling more test in BASH confirms that there is nothing in test. What's going on? Thanks.

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  • Port C's fread(&struct,....) to Python

    - by user287669
    Hey, I'm really struggling with this one. I'am trying to port a small piece of someone else's code to Python and this is what I have: typedef struct { uint8_t Y[LUMA_HEIGHT][LUMA_WIDTH]; uint8_t Cb[CHROMA_HEIGHT][CHROMA_WIDTH]; uint8_t Cr[CHROMA_HEIGHT][CHROMA_WIDTH]; } __attribute__((__packed__)) frame_t; frame_t frame; while (! feof(stdin)) { fread(&frame, 1, sizeof(frame), stdin); // DO SOME STUFF } Later I need to access the data like so: frame.Y[x][y] So I made a Class 'frame' in Python and inserted the corresponding variables(frame.Y, frame.Cb, frame.Cr). I have tried to sequentially map the data from Y[0][0] to Cr[MAX][MAX], even printed out the C struct in action but didn't manage to wrap my head around the method used to put the data in there. I've been struggling overnight with this and have to get back to the army tonight, so any immediate help is very welcome and appreciated. Thanks

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  • Python How to make a cross-module function?

    - by Evan
    I want to be able to call a global function from an imported class, for example In file PetStore.py class AnimalSound(object): def __init__(self): if 'makenoise' in globals(): self.makenoise = globals()['makenoise'] else: self.makenoise = lambda: 'meow' def __str__(self): return self.makenoise() Then when I test in the Python Interpreter >>> def makenoise(): ... return 'bark' ... >>> from PetStore import AnimalSound >>> sound = AnimalSound() >>> sound.makenoise() 'meow' I get a 'meow' instead of 'bark'. I have tried using the solutions provided in python-how-to-make-a-cross-module-variable with no luck.

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  • Determing Python version at runtime

    - by Gekitsuu
    The problem I'm having is that I've written code that depends on features in python2.6 so I'm trying to build a check that will produce a useful error if someone tries to run it on a machine with python lower than 2.6. The code I put in to check for the specific version and match it should work fine but the problem I have is the interpreter on a 2.4 machine reads the file and sees a "finally" at the end of my try loop and errors out before it gets far enough into execution for my if statement to handle the version mismatch. Other than changing the magic line to specifically look for /usr/bin/python2.6 is there a way python can handle this sort of thing?

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