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  • converting a Tree to newick format. java

    - by Esmond
    I'm having problems converting a binary rooted tree to newick format. The full explanation for such a format can be found: http://code.google.com/p/mrsrf/wiki/NewickTree An example of a newick format would be as follows: for a tree T such as http://www.cs.mcgill.ca/~cs251/OldCourses/1997/topic8/images/completetreetwo.gif the newick representation would be: (((8,9),(10,11)),((12,13),(14,15))) the internal node will become the commas while the leaves will be retained. such trees have internal nodes which will always have 2 children. I have a problem using recursion to come out with this newick format. The output contains far too many nodes and braces. Any comments to resolve this problem is appreciated or even an iterative algorithm would be welcomed import java.util.Stack; public class Tree { .... public String inOrderNewick(Node root, String output) throws ItemNotFoundException { if (root.hasChild()) { output += "("; output += inOrderNewick(root.child1, output); output += ","; output += inOrderNewick(root.child2, output); output += ")"; return output; } else { output += root.getSeq(); return output; } } }

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  • Adroid's DateFormat replacement - missing the format() with FieldPosition

    - by user331244
    Hi, I need to split a date string into pieces and I'm doing it using the public final StringBuffer format (Object object, StringBuffer buffer, FieldPosition field) from the java.text.DateFormat class. However, the implementation of this function is really slow, hence Android has an own implementation in android.text.format.DateFormat. BUT, in my case, I want to extract the different pieces of the date string (year, minute and so on). Since I need to be locale independent, I can not use SimpleDateFormat and custom strings. I do it as follows: Calendar c = ... // find out what field to extract int field = getField(); // Create a date string Field calendarField = DateFormat.Field.ofCalendarField(field); FieldPosition fieldPosition = new FieldPosition(calendarField); StringBuffer label = new StringBuffer(); label = getDateFormat().format(c.getTime(), label, fieldPosition); // Find the piece that we are looking for int beginIndex = fieldPosition.getBeginIndex(); int endIndex = fieldPosition.getEndIndex(); String asString = label.substring(beginIndex, endIndex); For some reason, the format() overload with the FieldPosition argument is not included in the android platform. Any ideas of how to do this in another way? Is there any easy way to tokenize the pattern string? Any other ideas?

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  • Python: Convert format string to regular expression

    - by miracle2k
    The users of my app can configure the layout of certain files via a format string. For example, the config value the user specifies might be: layout = '%(group)s/foo-%(locale)s/file.txt' I now need to find all such files that already exist. This seems easy enough using the glob module: glob_pattern = layout % {'group': '*', 'locale': '*'} glob.glob(glob_pattern) However, now comes the hard part: Given the list of glob results, I need to get all those filename-parts that matched a given placeholder, for example all the different "locale" values. I thought I would generate a regular expression for the format string that I could then match against the list of glob results (or then possibly skipping glob and doing all the matching myself). But I can't find a nice way to create the regex with both the proper group captures, and escaping the rest of the input. For example, this might give me a regex that matches the locales: regex = layout % {'group': '.*', 'locale': (.*)} But to be sure the regex is valid, I need to pass it through re.escape(), which then also escapes the regex syntax I have just inserted. Calling re.escape() first ruins the format string. I know there's fnmatch.translate(), which would even give me a regex - but not one that returns the proper groups. Is there a good way to do this, without a hack like replacing the placeholders with a regex-safe unique value etc.? Is there possibly some way (a third party library perhaps?) that allows dissecting a format string in a more flexible way, for example splitting the string at the placeholder locations?

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  • Session Id in url and/or cookie? [closed]

    - by Jacco
    Most people advice against rewriting every (internal) url to include the sessionId (both GET and POST). The standard argument against it seems to be:   If an attacker gets hold of the sessionId, they can hijack the session.   With the sessionId in the url, it easily leaks to the attacker (by referer etc.) But what if you put the sessionId in both an (encrypted) cookie and the url. if the sessionId in either the cookie or the url is missing or if they do not match, decline the request. Let's pretend the website in question is free of xss holes, the cookie encryption is strong enough, etc. etc. Then what is the increased risk of rewriting every url to include the sessionId? UPDATE: @Casper That is a very good point. so up to now there are 2 reasons: bad for search engines / SEO if used in public part of the website can cause trouble when users post an url with a session Id on a forum, send it trough email or bookmark the page apart from the:   It increases the security risk, but it is not clear what the increased risk is. some background info: I've a website that offers blog-like service to travellers. I cannot be sure cookies work nor can I require cookies to work. Most computers in internet cafes are old and not (even close to) up-to-date. The user has no control over them and the connection can be very unreliable for some more 'off the beaten path' locations. Binding the session to an IP-address is not possible, some places use load-balancing proxies with multiple IP addresses. (and from China there is The Great Firewall). Upon receiving the first cookie back, I flag cookies as mandatory. However, if the cookie was flagged as mandatory but not there, I ask for their password once more, knowing their session from the url. (Also cookies have a 1 time token in them, but that's not the point of this question). UPDATE 2: The conclusion seems to be that there are no extra *security* issues when you expose you session id trough the URL while also keeping a copy of the session id in an encrypted cookie. Do not hesitate to add additional information about any possible security implications

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  • TSQL - How to URL Encode

    - by Billy Logan
    Hello Everyone, Looking for a bug free tested sql script that i could use in a UDF to encode a url through sql. Function would take in a URL and pass out a URL Encoded URL. I have seen a few, but all i have come across seem to have some flaws. Thanks in advance, Billy

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  • Python requests - saving cookie for later url usage

    - by PythonRocks
    I been trying to get a cookie and post it to a url in later use in the program, but I cant seem to get the cookie parameters to work. Right now I have response = requests.get("url") But how exactly do I retrive cookies from this url and post them to a new url (the same cookies). The tutorial in requests is somewhat vague on the topic and gives examples I cannot test. Hope someone can help with further examples. This is python 2.7 btw.

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  • Javascript newbie, how to choose between window.URL.createObjectURL() and window.webkitURL.createObjectURL() based on browser

    - by Rohith Raveendran
    From the firefox developer website I know that firefox use objectURL = window.URL.createObjectURL(file); to get url of file type, but in chrome and other webkit browsers we have window.webkitURL.createObjectURL() for detecting url. I don't know how to swap this functions based on browser engines, and I need it to be worked on both browsers (Chrome and firefox) https://developer.mozilla.org/en/DOM/window.URL.createObjectURL

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  • Appfabric WF-WCF services retrive current url in codeactivity

    - by tartafe
    Hi, i have developed a wf-wcf services with a code activity and in it i want to retrive the current url of the service. If i disabling the persistence feature of appfabric i can retrive the url using HttpContext.Current.Request.Url.ToString() If the persistence feature is enabled the httpcontext is null. There is a different way to retrive the url of th wcf that host my code activity? Thanks in advace

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  • what is the openid url of facebook ???

    - by zjm1126
    i made my openid in my site like this : livejournal: { name: 'LiveJournal', label: 'Enter your Livejournal username.', url: 'http://{username}.livejournal.com/' }, wordpress: { name: 'Wordpress', label: 'Enter your Wordpress.com username.', url: 'http://{username}.wordpress.com/' }, blogger: { name: 'Blogger', label: 'Your Blogger account', url: 'http://{username}.blogspot.com/' }, and i want add facebook on my openid provide, so what is the url of facebook openid ?? thanks but this can login use facebook: https://www.gigya.com/site/LogIn.aspx you can try it by yourself use facebook login.

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  • why jsessionid is appended to each url?

    - by sword101
    greetings all i am deploying an app using spring framework on the apache tomcat when running the application from the tomcat directly,there's no jsessionid appended to any url at all but after mapping the application to the domain,and trying to run it i got a jsessionid appended to each url in the application,i tried the spring security attribute disable-url-rewriting but it doesn't work,it removes the jsessionid from the url but the application doesn't work no more,the user cannot login. so i guess it's another problem,any ideas why this happens,how to solve it? thanks.

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  • Storing Requested URL in Global.asax without Session State in ASP.NET

    - by Mark Richman
    I have a complex URL rewriting scheme which breaks the built in Forms Authentication ReturnUrl mechanism. I would like to grab the requested URL for later redirection away from my login.aspx. I can get this URL in Application_BeginRequest via HttpContext.Current.Request.AppRelativeCurrentExecutionFilePath. However, Session state is not available in Application_BeginRequest. How can I store this URL prior to ASP.NET redirecting me to login.aspx?

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  • Custom URL Scheme from settings.bundle

    - by S-T-R-E-G-A
    Is it possible to set a custom URL scheme to launch my app from a link but make this a user defined setting? My app relies on a user defined server url and I would like to be able to set a URL scheme to launch my app using the users custom URL from lets say an email link. I noticed the info.plist has these references ${EXECUTABLE_NAME} can I define my own custom reference maybe?

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  • url helper diificulty

    - by user281180
    Can anyone help me for the following: I am having the error message. How can I correct that? Error 4 Use of unassigned local variable 'url' on the url.Action... UrlHelper url; string fullUrl = url.Action( "Details", "test", new {test.ID } ); Thanks

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  • Empty URL In SiteMapNode

    - by Kezzer
    I've got a SiteMap with blank URL attributes in each siteMapNode. Anyone know how to render them if the URL is blank? I'm doing a foreach against the SiteMap.CurrentNode and it doesn't retrieve siteMapNode elements that have empty URL attributes, but I do need to render them (just without a URL). Any ideas?

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  • How to download file from particular url???

    - by greshi gupta
    NSURL * url = @"http://192.168.100.161/UploadWhiteB/wh.txt"; NSData * data = [NSData dataWithContentsOfURL:url]; if (data != nil) { NSLog(@"\nis not nil"); NSString *readdata = [[NSString alloc] initWithContentsOfURL:(NSData *)data ]; I write this code to download a file from given url... but i get an error on line NSData * data = [NSData dataWithContentsOfURL:url]; uncaught exception....so please help me out..

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  • How to insert URL parameter in DIV?

    - by rajesh
    Hi, my code is <a href="#" target="_blank" class="floatLeft" onclick="change('http://localhost/allwidgets/widgets.html');" > function change(url) { alert(url); document.getElementById("mainOuter").innerHTML=url; } Actually I want that url should go in innerHTML of mainOuter div and that page should display in that. Please suggest.... Thanks

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  • replace all spaces and special symbols with dash in url use php language

    - by khushbu
    How to replace space and dash coming together with only dash in php e.g below is my url [url] = http://kjd.case.150/1 BHK+Balcony- 700+ sqft. spacious apartmetn Bandra West In this I want to replace all special characters with dash in php.In url there is already 1 dash after balcony.If i m replacing dash with special chars then it becomes two dash bcoz already there is 1 dash in url and i want only 1 dash.

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  • php extracting complete url with variables

    - by salmane
    Hi there, Using Php I would like to extract the current Url of a page including all variables attached to it. $_SERVER['PHP_SELF'] only return the url without the variable . any idea what function I need. example : www.site.com/?v1=xyz&v2=123 using $_SERVER['PHP_SELF'] I get only : www.site.com as opposed to the whole url. using $_GET[] individually is not an opton since I am not sure what variable are attached to the URL. thank you

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  • regex part of url

    - by kyle
    So I'm trying to get the id from a url for youtube.. here is the url http://gdata.youtube.com/feeds/api/videos/kffacxfA7G4/related?v=2 then there's also - in the url too. it wouldn't let me post another url but it's the same as above but with the id ucvkO0x-mL4 how can I grab between videos/ and /related (the id) with regex? I tried to use txt2re.com which is what I always use, but it's not working for this case.. thanks!

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  • Canonicalization of single, small pages like reviews or product categories [SEO]

    - by Valorized
    In general I pretty much like the idea of canonicalization. And in most cases, Google explains possible procedures in a clear way. For example: If I have duplicates because of parameters (eg: &sort=desc) it's clear to use the canonical for the site, provided the within the head-tag. However I'm wondering how to handle "small - no to say thin content - sites". What's my definition of a small site? An Example: On one of my main sites, we use a directory based url-structure. Let's see: example.com/ (root) example.com/category-abc/ example.com/category-abc/produkt-xy/ Moreover we provide on page, that includes all products example.com/all-categories/ (lists all products the same way as in the categories) In case of reviews, we use a similar structure: example.com/reviews/product-xy/ shows all review for one certain product example.com/reviews/product-xy/abc-your-product-is-great/ shows one certain review example.com/reviews/ shows all reviews for all products (latest first) Let's make it even more complicated: On every product site, there are the latest 2 reviews at the end of the page. So you see, a lot of potential duplicates. Q1: Should I create canonicals for a: example.com/category-abc/ to example.com/all-categories/ b: example.com/reviews/product-xy/abc-your-product-is-great/ to example.com/reviews/product-xy/ or to example.com/review/ or none of them? Q2: Can I link the collection of categories (all-categories/) and collection of all reviews (reviews/ and reviews/product-xy/) to the single category respectively to the single review. Example: example.com/reviews/ includes - let's say - 100 reviews. Can I somehow use a markup that tells search engines: "Hey, wait, you are now looking at a collection of 100 reviews - do not index this collection, you should rather prefer indexing every single review as a single page!". In HTML it might be something like that (which - of course - does not work, it's only to show you what I mean): <div class="review" rel="canonical" href="http://example.com/reviews/product-xz/abc-your-product-is-great/">HERE GOES THE REVIEW</div> Reason: I don't think it is a great user experience if the user searches for "your product is great" and lands on example.com/reviews/ instead of example.com/reviews/product-xy/abc-your-product-is-great/. On the first site, he will have to search and might stop because of frustration. The second result, however, might lead to a conversion. The same applies for categories. If the user is searching for category-Z, he might land on the all-categories page and he has to scroll down to the (last) category, to find what he searched for (Z). So what's best practice? What should I do? Thank you for your help!

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  • Canonicalization of single, small pages like reviews or product categories

    - by Valorized
    In general I pretty much like the idea of canonicalization. And in most cases, Google explains possible procedures in a clear way. For example: If I have duplicates because of parameters (eg: &sort=desc) it's clear to use the canonical for the site, provided the within the head-tag. However I'm wondering how to handle "small - no to say thin content - sites". What's my definition of a small site? An Example: On one of my main sites, we use a directory based url-structure. Let's see: example.com/ (root) example.com/category-abc/ example.com/category-abc/produkt-xy/ Moreover we provide on page, that includes all products example.com/all-categories/ (lists all products the same way as in the categories) In case of reviews, we use a similar structure: example.com/reviews/product-xy/ shows all review for one certain product example.com/reviews/product-xy/abc-your-product-is-great/ shows one certain review example.com/reviews/ shows all reviews for all products (latest first) Let's make it even more complicated: On every product site, there are the latest 2 reviews at the end of the page. So you see, a lot of potential duplicates. Q1: Should I create canonicals for a: example.com/category-abc/ to example.com/all-categories/ b: example.com/reviews/product-xy/abc-your-product-is-great/ to example.com/reviews/product-xy/ or to example.com/review/ or none of them? Q2: Can I link the collection of categories (all-categories/) and collection of all reviews (reviews/ and reviews/product-xy/) to the single category respectively to the single review. Example: example.com/reviews/ includes - let's say - 100 reviews. Can I somehow use a markup that tells search engines: "Hey, wait, you are now looking at a collection of 100 reviews - do not index this collection, you should rather prefer indexing every single review as a single page!". In HTML it might be something like that (which - of course - does not work, it's only to show you what I mean): <div class="review" rel="canonical" href="http://example.com/reviews/product-xz/abc-your-product-is-great/"> HERE GOES THE REVIEW</div> Reason: I don't think it is a great user experience if the user searches for "your product is great" and lands on example.com/reviews/ instead of example.com/reviews/product-xy/abc-your-product-is-great/. On the first site, he will have to search and might stop because of frustration. The second result, however, might lead to a conversion. The same applies for categories. If the user is searching for category-Z, he might land on the all-categories page and he has to scroll down to the (last) category, to find what he searched for (Z). So what's best practice? What should I do?

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  • URL Rewrite in IIS7 Web Service - WebService.asmx => WebService in the SOAP doc

    - by Robert Kaucher
    I have an IIS7.5 (Server 2008 R2) based web service that I would like to make as independant on the current implementations technology as possible. I am using the URL rewrite module (http://learn.iis.net/page.aspx/734/url-rewrite-module/) to remove the .asmx portion of the URL and that is working fine for the HTTP request portion. However, I still see .asmx in the WSDL file when I access it. I was wondering if anyone has done this and if so, what advice could be offered. It doesn't seem like a hard problem to solve. But I have tries a number of things with "custom tags" and can't seem to get it working to save my life.

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  • The requested URL /PHP/php-cgi.exe/a.php was not found on this server

    - by Alona
    I have logged in just now so I couldn't edit the previous question I have asked, Sorry :) my last question is The requested URL /PHP/php-cgi.exe/a.php was not found on this server I have installed on Windows7 apache2.2 and php5.3 when I am trying to execute the *.php file I am getting an error: 404 Not Found "The requested URL /PHP/php-cgi.exe/a.php was not found on this server" This is my httpd configuration file From httpd.conf: ScriptAlias /cgi-bin/ "C:/Program Files (x86)/Apache Software Foundation/Apache2.2/cgi-bin/" ScriptAlias /php/ "C:/PHP/" AddType application/x-httpd-php .php Action application/x-httpd-php "C:/PHP/php-cgi.exe" DocumentRoot "C:/Program Files (x86)/Apache Software Foundation/Apache2.2/htdocs" I can execute perl scripts that resides in "C:/Program Files (x86)/Apache Software Foundation/Apache2.2/cgi-bin/" however execution of php scripts results with an error: "The requested URL /PHP/php-cgi.exe/a.php was not found on this server". Thanks

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