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  • Replicating SQL's 'Join' in Python

    - by Daniel Mathews
    I'm in the process of trying to switch from R to Python (mainly issues around general flexibility). With Numpy, matplotlib and ipython, I've am able to cover all my use cases save for merging 'datasets'. I would like to simulate SQL's join by clause (inner, outer, full) purely in python. R handles this with the 'merge' function. I've tried the numpy.lib.recfunctions join_by, but it critical issues with duplicates along the 'key': join_by(key, r1, r2, jointype='inner', r1postfix='1', r2postfix='2', defaults=None, usemask=True, asrecarray=False) Join arrays r1 and r2 on key key. The key should be either a string or a sequence of string corresponding to the fields used to join the array. An exception is raised if the key field cannot be found in the two input arrays. Neither r1 nor r2 should have any duplicates along key: the presence of duplicates will make the output quite unreliable. Note that duplicates are not looked for by the algorithm. source: http://presbrey.mit.edu:1234/numpy.lib.recfunctions.html Any pointers or help will be most appreciated!

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  • iPhone multitouch - Some touches dispatch touchesBegan: but not touchesMoved:

    - by zkarcher
    I'm developing a multitouch application. One touch is expected to move, and I need to track its position. For all other touches, I need to track their beginnings and endings, but their movement is less critical. Sometimes, when 3 or more touches are active, my UIView does not receive touchesMoved: events for the moving touch. This problem is intermittent, and can always be reproduced after a few attempts: Touch the screen with 2 fingers. Touch the screen with another finger, and move this finger around. The moving finger always dispatches touchesBegan: and touchesEnded:, but sometimes does not dispatch any touchesMoved: events. Whenever the moving touch does not dispatch touchesMoved: events, I can force it to dispatch touchesMoved: if I move one of the other touches. This seems to "force" every touch to recheck its position, and I successfully receive a touchesMoved: event. However, this is clumsy. This bug is reproducible on both the iPhone 2G and 3GS models. My question is: How do I ensure that my moving touch dispatches touchesMoved: events? Does anyone have any experience with this issue? I've spent few fruitless days searching the web for answers. I found a post describing how to sync touch events with the VBL: http://www.71squared.com/2009/04/maingameloop-changes/ . However, this has not solved the problem. I really don't know how to proceed. Any help is appreciated!

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  • Unit Testing in the real world

    - by Malfist
    I manage a rather large application (50k+ lines of code) by myself, and it manages some rather critical business actions. To describe the program simple, I would say it's a fancy UI with the ability to display and change data from the database, and it's managing around 1,000 rental units, and about 3k tenants and all the finances. When I make changes, because it's so large of a code base, I sometimes break something somewhere else. I typically test it by going though the stuff I changed at the functional level (i.e. I run the program and work through the UI), but I can't test for every situation. That is why I want to get started with unit testing. However, this isn't a true, three tier program with a database tier, a business tier, and a UI tier. A lot of the business logic is performed in the UI classes, and many things are done on events. To complicate things, everything is database driven, and I've not seen (so far) good suggestions on how to unit test database interactions. How would be a good way to get started with unit testing for this application. Keep in mind. I've never done unit testing or TDD before. Should I rewrite it to remove the business logic from the UI classes (a lot of work)? Or is there a better way?

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  • Should I move big data blobs in JSON or in separate binary connection?

    - by Amagrammer
    QUESTION: Is it better to send large data blobs in JSON for simplicity, or send them as binary data over a separate connection? If the former, can you offer tips on how to optimize the JSON to minimize size? If the latter, is it worth it to logically connect the JSON data to the binary data using an identifier that appears in both, e.g., as "data" : "< unique identifier " in the JSON and with the first bytes of the data blob being < unique identifier ? CONTEXT: My iPhone application needs to receive JSON data over the 3G network. This means that I need to think seriously about efficiency of data transfer, as well as the load on the CPU. Most of the data transfers will be relatively small packets of text data for which JSON is a natural format and for which there is no point in worrying much about efficiency. However, some of the most critical transfers will be big blobs of binary data -- definitely at least 100 kilobytes of data, and possibly closer to 1 megabyte as customers accumulate a longer history with the product. (Note: I will be caching what I can on the iPhone itself, but the data still has to be transferred at least once.) It is NOT streaming data. I will probably use a third-party JSON SDK -- the one I am using during development is here. Thanks

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  • Overwriting lines in file in C

    - by KáGé
    Hi, I'm doing a project on filesystems on a university operating systems course, my C program should simulate a simple filesystem in a human-readable file, so the file should be based on lines, a line will be a "sector". I've learned, that lines must be of the same length to be overwritten, so I'll pad them with ascii zeroes till the end of the line and leave a certain amount of lines of ascii zeroes that can be filled later. Now I'm making a test program to see if it works like I want it to, but it doesnt. The critical part of my code: file = fopen("irasproba_tesztfajl.txt", "r+"); //it is previously loaded with 10 copies of the line I'll print later in reverse order /* this finds the 3rd line */ int count = 0; //how much have we gone yet? char c; while(count != 2) { if((c = fgetc(file)) == '\n') count++; } fflush(file); fprintf(file, "- . , M N B V C X Y Í U Á É L K J H G F D S A Ú O P O I U Z T R E W Q Ó Ü Ö 9 8 7 6 5 4 3 2 1 0\n"); fflush(file); fclose(file); Now it does nothing, the file stays the same. What could be the problem? Thank you.

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  • How can I improve this design?

    - by klausbyskov
    Let's assume that our system can perform actions, and that an action requires some parameters to do its work. I have defined the following base class for all actions (simplified for your reading pleasure): public abstract class BaseBusinessAction<TActionParameters> : where TActionParameters : IActionParameters { protected BaseBusinessAction(TActionParameters actionParameters) { if (actionParameters == null) throw new ArgumentNullException("actionParameters"); this.Parameters = actionParameters; if (!ParametersAreValid()) throw new ArgumentException("Valid parameters must be supplied", "actionParameters"); } protected TActionParameters Parameters { get; private set; } protected abstract bool ParametersAreValid(); public void CommonMethod() { ... } } Only a concrete implementation of BaseBusinessAction knows how to validate that the parameters passed to it are valid, and therefore the ParametersAreValid is an abstract function. However, I want the base class constructor to enforce that the parameters passed are always valid, so I've added a call to ParametersAreValid to the constructor and I throw an exception when the function returns false. So far so good, right? Well, no. Code analysis is telling me to "not call overridable methods in constructors" which actually makes a lot of sense because when the base class's constructor is called the child class's constructor has not yet been called, and therefore the ParametersAreValid method may not have access to some critical member variable that the child class's constructor would set. So the question is this: How do I improve this design? Do I add a Func<bool, TActionParameters> parameter to the base class constructor? If I did: public class MyAction<MyParameters> { public MyAction(MyParameters actionParameters, bool something) : base(actionParameters, ValidateIt) { this.something = something; } private bool something; public static bool ValidateIt() { return something; } } This would work because ValidateIt is static, but I don't know... Is there a better way? Comments are very welcome.

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  • Testing fault tolerant code

    - by Robert
    I’m currently working on a server application were we have agreed to try and maintain a certain level of service. The level of service we want to guaranty is: if a request is accepted by the server and the server sends on an acknowledgement to the client we want to guaranty that the request will happen, even if the server crashes. As requests can be long running and the acknowledgement time needs be short we implement this by persisting the request, then sending an acknowledgement to the client, then carrying out the various actions to fulfill the request. As actions are carried out they too are persisted, so the server knows the state of a request on start up, and there’s also various reconciliation mechanisms with external systems to check the accuracy of our logs. This all seems to work fairly well, but we have difficult saying this with any conviction as we find it very difficult to test our fault tolerant code. So far we’ve come up with two strategies but neither is entirely satisfactory: Have an external process watch the server code and then try and kill it off at what the external process thinks is an appropriate point in the test Add code the application that will cause it to crash a certain know critical points My problem with the first strategy is the external process cannot know the exact state of the application, so we cannot be sure we’re hitting the most problematic points in the code. My problem with the second strategy, although it gives more control over were the fault takes, is I do not like have code to inject faults within my application, even with optional compilation etc. I fear it would be too easy to over look a fault injection point and have it slip into a production environment.

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  • Find position of a node within a nodeset using xpath

    - by Phil Nash
    After playing around with position() in vain I was googling around for a solution and arrived at this older stackoverflow question which almost describes my problem. The difference is that the nodeset I want the position within is dynamic, rather than a contiguous section of the document. To illustrate I'll modify the example from the linked question to match my requirements. Note that each <b> element is within a different <a> element. This is the critical bit. <root <a <bzyx</b </a <a <bwvu</b </a <a <btsr</b </a <a <bqpo</b </a </root Now if I queried, using XPath for a/b I'd get a nodeset of the four <b> nodes. I want to then find the position within that nodeset of the node that contains the string 'tsr'. The solution in the other post breaks down here: count(a/b[.='tsr']/preceding-sibling::*)+1 returns 1 because preceding-sibling is navigating the document rather than the context node-set. Is it possible to work within the context nodeset?

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  • Parallel scroll textarea and webpage with jquery

    - by Roger Rogers
    This is both a conceptual and how-to question: In wiki formatting, or non WYSIWYG editor scenarios, you typically have a textarea for content entry and then an ancillary preview pane to show results, just like StackOverflow. This works fairly well, except with larger amounts of text, such as full page wikis, etc. I have a concept that I'd like critical feedback/advice on: Envision a two pane layout, with the preview content on the left side, taking up ~ 2/3 of the page, and the textarea on the right side, taking up ~ 1/3 of the page. The textarea would float, to remain in view, even if the user scrolls the browser window. Furthermore, if the user scrolls the textarea content, supposing it has exceeded the textarea's frame size, the page would scroll so that the content presently showing in the textarea syncs/is parallel with the content showing in the browser window. I'm imagining a wiki scenario, where going back and forth between markup and preview is frustrating. I'm curious what others think; is there anything out there like this? Any suggestions on how to attack this functionality (ideally using jquery)? Thanks

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  • How Do I Make A Small jQuery Confirm Replacement?

    - by Volomike
    I have a table row with a Delete link on it for deleting that row. I want to create a jQuery feature that pops up above that Delete link an "Are you sure?" yes/no confirm dialog, but in a very small size. How do I achieve this in the least lines of code in jQuery? I mean, I need to determine the x,y of the Delete link that was detected from a click, and then move (and fadeIn()) a DIV into that location. If they click anywhere on that page except Yes on the yes/no, the thing does a fadeOut(). If they click Yes, then it deletes the row with a fadeOut() effect. Note on this I don't need a modal screen dimmer, but the confirm needs to work modally. (Items above that are bolded are something I don't exactly know how to do. Items bolded and italicized are important to what I need to do.) I would think a widget like this would be critical to any Web 2.0 design, much like the Pines Notify feature seems essential.

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  • Delphi, PGDac vs Zeos, Fetch, Lookup?

    - by durumdara
    Hi! I used Zeos to test to know: is ZTable uses fetch technics, or not? May in the future we migrate our lesser system to PGSQL, and this used now "Table" components (as BDE, but it have an SQL-like server). These tables use real cursors, a "Window" with N record, so lookup is very fast, because the Locate/Lookup is started on server, and only these N records are refreshed, no matter, how many records in the lookup table. PGSQL uses fetch technics as I know, and I tested it with a table (id int, name varchar(100)), and 1 million records. (I also trying this with mysql). The adapter is Zeos. ID, sec to find, allocated memory in bytes on client. MySQL 500000 2,761 113 196 344 1000000 3,214 225 471 232 313800 0,437 225 471 232 328066 0,468 225 471 232 276374 0,390 225 471 232 905984 1,264 225 471 232 260253 0,359 225 471 232 PGSQL 500000 3,042 113 188 184 1000000 3,744 225 463 064 313800 0,436 225 463 064 328066 0,452 225 463 064 276374 0,375 225 463 064 905984 1,295 225 463 064 260253 0,359 225 463 064 142023 0,203 225 463 064 As you see the records are fetched locally, this cause the 225 MB usage, and searches are slow a little, based where is the record we must find. I want to ask more things: a.) Is PGDAC have some technics to we can use the lookups without pay the fetch with memory and secs? b.) Or is PG ODBC driver can help in this problem with ADO? (As I know ADO can use server side cursors)? c.) Have anybody some experience with lookup tables, and performance? Is this critical question or it is not? (With client memory usage too). d.) If no chance to avoid fetch hell with lookups, what we can do? Server Side Joins, and unique code for Lookup field changing without real Lookup? Thanks for your help: dd

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  • a package for kruskal-wallis that shows pairwise comparison details

    - by dalloliogm
    The standard stats::kruskal.test module allows to calculate the kruskal-wallis test on a dataset: >>> data(diamonds) >>> kruskal.test.test(price~carat, data=diamonds) Kruskal-Wallis rank sum test data: price by carat by color Kruskal-Wallis chi-squared = 50570.15, df = 272, p-value < 2.2e-16 this is fine, it is giving me the probability that all the groups in the data have the same mean. However, I would like to have the details per each pair comparison, like if diamonds of colors D and E have the same mean price, as some other softwares (SPSS) do when you ask for a Kruskal test. I have found kruskalmc from the package pgirmess which allows me to do what I want to do: > kruskalmc(diamonds$price, diamonds$color) Multiple comparison test after Kruskal-Wallis p.value: 0.05 Comparisons obs.dif critical.dif difference D-E 571.7459 747.4962 FALSE D-F 2237.4309 751.5684 TRUE D-G 2643.1778 726.9854 TRUE D-H 4539.4392 774.4809 TRUE D-I 6002.6286 862.0150 TRUE D-J 8077.2871 1061.7451 TRUE E-F 2809.1767 680.4144 TRUE E-G 3214.9237 653.1587 TRUE E-H 5111.1851 705.6410 TRUE E-I 6574.3744 800.7362 TRUE E-J 8649.0330 1012.6260 TRUE F-G 405.7470 657.8152 FALSE F-H 2302.0083 709.9533 TRUE F-I 3765.1977 804.5390 TRUE F-J 5839.8562 1015.6357 TRUE G-H 1896.2614 683.8760 TRUE G-I 3359.4507 781.6237 TRUE G-J 5434.1093 997.5813 TRUE H-I 1463.1894 825.9834 TRUE H-J 3537.8479 1032.7058 TRUE I-J 2074.6585 1099.8776 TRUE However, this package only allows for one categoric variable (e.g. I can't study the prices clustered by color and by carat, as I can do with kruskal.test), and I don't know anything about the pgirmess package, whether it is maintained or not, or if it is tested.

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  • C# WinForms. Multiple Forms in separate threads

    - by Calum Murray
    I'm trying to run an ATM Simulation in C# with Windows Forms that can have more than one instance of an ATM machine transacting with a bank account simultaneously. The idea is to use semaphores/locking to block critical code that may lead to race conditions. My question is this: How can I run two Forms simultaneously on separate threads? In particular, how does all of this fit in with the Application.Run() that's already there? Here's my main class: public class Bank { private Account[] ac = new Account[3]; private ATM atm; public Bank() { ac[0] = new Account(300, 1111, 111111); ac[1] = new Account(750, 2222, 222222); ac[2] = new Account(3000, 3333, 333333); Application.Run(new ATM(ac)); } static void Main(string[] args) { new Bank(); } } ...that I want to run two of these forms on separate threads... public partial class ATM : Form { //local reference to the array of accounts private Account[] ac; //this is a reference to the account that is being used private Account activeAccount = null; private static int stepCount = 0; private string buffer = ""; // the ATM constructor takes an array of account objects as a reference public ATM(Account[] ac) { InitializeComponent(); //Sets up Form ATM GUI in ATM.Designer.cs this.ac = ac; } ... I've tried using Thread ATM2 = new Thread(new ThreadStart(/*What goes in here?*/)); But what method do I put in the ThreadStart constructor, since the ATM form is event-driven and there's no one method controlling it? Thanks, Calum

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  • Fastest PNG decoder for .NET

    - by sboisse
    Our web server needs to process many compositions of large images together before sending the results to web clients. This process is performance critical because the server can receive several thousands of requests per hour. Right now our solution loads PNG files (around 1MB each) from the HD and sends them to the video card so the composition is done on the GPU. We first tried loading our images using the PNG decoder exposed by the XNA API. We saw the performance was not too good. To understand if the problem was loading from the HD or the decoding of the PNG, we modified that by loading the file in a memory stream, and then sending that memory stream to the .NET PNG decoder. The difference of performance using XNA or using System.Windows.Media.Imaging.PngBitmapDecoder class is not significant. We roughly get the same levels of performance. Our benchmarks show the following performance results: Load images from disk: 37.76ms 1% Decode PNGs: 2816.97ms 77% Load images on Video Hardware: 196.67ms 5% Composition: 87.80ms 2% Get composition result from Video Hardware: 166.21ms 5% Encode to PNG: 318.13ms 9% Store to disk: 3.96ms 0% Clean up: 53.00ms 1% Total: 3680.50ms 100% From these results we see that the slowest parts are when decoding the PNG. So we are wondering if there wouldn't be a PNG decoder we could use that would allow us to reduce the PNG decoding time. We also considered keeping the images uncompressed on the hard disk, but then each image would be 10MB in size instead of 1MB and since there are several tens of thousands of these images stored on the hard disk, it is not possible to store them all without compression.

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  • C# Byte[] to Url Friendly String

    - by LorenVS
    Hello, I'm working on a quick captcha generator for a simple site I'm putting together, and I'm hoping to pass an encrypted key in the url of the page. I could probably do this as a query string parameter easy enough, but I'm hoping not too (just because nothing else runs off the query string)... My encryption code produces a byte[], which is then transformed using Convert.ToBase64String(byte[]) into a string. This string, however, is still not quite url friendly, as it can contain things like '/' and '='. Does anyone know of a better function in the .NET framework to convert a byte array to a url friendly string? I know all about System.Web.HttpUtility.UrlEncode() and its equivalents, however, they only work properly with query string parameters. If I url encode an '=' inside of the path, my web server brings back a 400 Bad Request error. Anyways, not a critical issue, but hoping someone can give me a nice solution **EDIT: Just to be absolutely sure exactly what I'm doing with the string, I figured I would supply a little more information. The byte[] that results from my encryption algorithm should be fed through some sort of algorithm to make it into a url friendly string. After this, it becomes the content of an XElement, which is then used as the source document for an XSLT transformation, and is used as a part of the href attribute for an anchor. I don't believe the xslt transformation is causing the issues, since what is coming through on the path appears to be an encoded query string parameter, but causes the HTTP 400 I've also tried HttpUtility.UrlPathEncode() on a base64 string, but that doesn't seem to do the trick either (I still end up with '/'s in my url)**

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  • C# LINQ to XML nissing space character.

    - by Fossaw
    I write an XML file "by hand", (i.e. not with LINQ to XML), which sometimes includes an open/close tag containing a single space character. Upon viewing the resulting file, all appears correct, example below... <Item> <ItemNumber>3</ItemNumber> <English> </English> <Translation>Ignore this one. Do not remove.</Translation> </Item> ... the reasons for doing this are various and irrelevent, it is done. Later, I use a C# program with LINQ to XML to read the file back and extract the record... XElement X_EnglishE = null; // This is CRAZY foreach (XElement i in Records) { X_EnglishE = i.Element("English"); // There is only one damned record! } string X_English = X_EnglishE.ToString(); ... and test to make sure it is unchanged from the database record. I detect a change, when processing Items where the field had the single space character... +E+ Text[3] English source has been altered: Was: >>> <<< Now: >>><<< ... the and <<< parts I added to see what was happening, (hard to see space characters). I have fiddled around with this but can't see why this is so. It is not absolutely critical, as the field is not used, (yet), but I cannot trust C# or LINQ or whatever is doing this, if I do not understand why it is so. So what is doing that and why?

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  • memory alignment within gcc structs

    - by Mumbles
    I am porting an application to an ARM platform in C, the application also runs on an x86 processor, and must be backward compatible. I am now having some issues with variable alignment. I have read the gcc manual for __attribute__((aligned(4),packed)) I interpret what is being said as the start of the struct is aligned to the 4 byte boundry and the inside remains untouched because of the packed statement. originally I had this but occasionally it gets placed unaligned with the 4 byte boundary. typedef struct { unsigned int code; unsigned int length; unsigned int seq; unsigned int request; unsigned char nonce[16]; unsigned short crc; } __attribute__((packed)) CHALLENGE; so I change it to this. typedef struct { unsigned int code; unsigned int length; unsigned int seq; unsigned int request; unsigned char nonce[16]; unsigned short crc; } __attribute__((aligned(4),packed)) CHALLENGE; The understand I stated earlier seems to be incorrect as both the struct is now aligned to a 4 byte boundary, and and the inside data is now aligned to a four byte boundary, but because of the endianess, the size of the struct has increased in size from 42 to 44 bytes. This size is critical as we have other applications that depend on the struct being 42 bytes. Could some describe to me how to perform the operation that I require. Any help is much appreciated.

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  • RANDOM Number Generation in C

    - by CVS-2600Hertz-wordpress-com
    Recently i have begun development of a simple game. It is improved version of an earlier version that i had developed. Large part of the game's success depends on Random number generation in different modes: MODE1 - Truly Random mode myRand(min,max,mode=1); Should return me a random integer b/w min & max. MODE2 - Pseudo Random : Token out of a bag mode myRand(min,max,mode=2); Should return me a random integer b/w min & max. Also should internally keep track of the values returned and must not return the same value again until all the other values are returned atleast once. MODE3 - Pseudo Random : Human mode myRand(min,max,mode=3); Should return me a random integer b/w min & max. The randomisation ought to be not purely mathematically random, rather random as user perceive it. How Humans see RANDOM. * Assume the code is time-critical (i.e. any performance optimisations are welcome) * Pseudo-code will do but an implementation in C is what i'm looking for. * Please keep it simple. A single function should be sufficient (thats what i'm looking for) Thank You

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  • How to disable mod_security2 rule (false positive) for one domain on centos 5

    - by nicholas.alipaz
    Hi I have mod_security enabled on a centos5 server and one of the rules is keeping a user from posting some text on a form. The text is legitimate but it has the words 'create' and an html <table> tag later in it so it is causing a false positive. The error I am receiving is below: [Sun Apr 25 20:36:53 2010] [error] [client 76.171.171.xxx] ModSecurity: Access denied with code 500 (phase 2). Pattern match "((alter|create|drop)[[:space:]]+(column|database|procedure|table)|delete[[:space:]]+from|update.+set.+=)" at ARGS:body. [file "/usr/local/apache/conf/modsec2.user.conf"] [line "352"] [id "300015"] [rev "1"] [msg "Generic SQL injection protection"] [severity "CRITICAL"] [hostname "www.mysite.com"] [uri "/node/181/edit"] [unique_id "@TaVDEWnlusAABQv9@oAAAAD"] and here is /usr/local/apache/conf/modsec2.user.conf (line 352) #Generic SQL sigs SecRule ARGS "((alter|create|drop)[[:space:]]+(column|database|procedure|table)|delete[[:space:]]+from|update.+set.+=)" "id:1,rev:1,severity:2,msg:'Generic SQL injection protection'" The questions I have are: What should I do to "whitelist" or allow this rule to get through? What file do I create and where? How should I alter this rule? Can I set it to only be allowed for the one domain, since it is the only one having the issue on this dedicated server or is there a better way to exclude table tags perhaps? Thanks guys

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  • Could Python's logging SMTP Handler be freezing my thread for 2 minutes?

    - by Oddthinking
    A rather confusing sequence of events happened, according to my log-file, and I am about to put a lot of the blame on the Python logger, which is a bold claim. I thought I should get some second opinions about whether what I am saying could be true. I am trying to explain why there is are several large gaps in my log file (around two minutes at a time) during stressful periods for my application when it is missing deadlines. I am using Python's logging module on a remote server, and have set-up, with a configuration file, for all logs of severity of ERROR or higher to be emailed to me. Typically, only one error will be sent at a time, but during periods of sustained problems, I might get a dozen in a minute - annoying, but nothing that should stress SMTP. I believe that, after a short spurt of such messages, the Python logging system (or perhaps the SMTP system it is sitting on) is encountering errors or congestion. The call to Python's log is then BLOCKING for two minutes, causing my thread to miss its deadlines. (I was smart enough to move the logging until after the critical path of the application - so I don't care if logging takes me a few seconds, but two minutes is far too long.) This seems like a rather awkward architecture (for both a logging system that can freeze up, and for an SMTP system (Ubuntu, sendmail) that cannot handle dozens of emails in a minute**), so this surprises me, but it exactly fits the symptoms. Has anyone had any experience with this? Can anyone describe how to stop it from blocking? ** EDIT: I actually counted. A little under 4000 short emails in two hours. So far more than I suggested, sorry. But enough to over-fill a Sendmail's buffers?

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  • Help me avoid a resonance cascade.

    - by SLC
    Hi, my name is Dr. Kleiner, and I'm a senior scientist working at the Black Mesa Research Facility. I've just finished compiling my code to analyse a large unknown sample we've come across. Unfortunately, there were 19 build errors and 42 warnings, but I've been told the experiment must go ahead. Time is critical, we've already got one of our newest employees who is suiting up as I type this to complete the experiment. I really need some help. Can you think of anything last minute to stop a potential resonance cascade? Someone has hidden my glasses again... Anyway, I hope I never see a resonance cascade, and definitely don't want to create one. It's my lunch break in 5 minutes, and my casserole is already in the microwave ready. Please, give me some advice. If it helps I wrote all of the code to analyse the sample and activate the sampler machine in BASIC. Edit: Oh god! They're everywhere! Send assista

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  • How Does MVC Handle Missing Data Requirements

    - by Don Bakke
    I'm teaching myself MVC concepts in hopes of applying them to a non-OO/procedural development environment. I am pretty sure I understand simple View - Request - Controller - Request - Model - Response - Controller - Response - View flow. What I am struggling with is understanding more complex scenarios. For instance, let's say I have a shopping cart form with a button for 'Calculate Shipping'. Normally a click on this button will follow the above flow. But what if there is missing data, like the zip code? Should the View verify this first and alert the user before making a 'Calculate Shipping' request? Or should the request be made and the Model returns a notification that critical data is missing? If the latter, does the Controller instruct the View to alert the user? What if I wanted to prompt the user for the missing zip code (perhaps in a popup input display) and then automatically request the 'Calculate Shipping' method again? I suppose this gets into the question of how smart a View ought to be. It seems that MVC has evolved due to richer UI and automation (such as with data-binding) and this muddies the water from a purist MVC perspective. Any thoughts are greatly appreciated.

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  • How can I apply a PSSM efficiently?

    - by flies
    I am fitting for position specific scoring matrices (PSSM aka Position Specific Weight Matrices). The fit I'm using is like simulated annealing, where I the perturb the PSSM, compare the prediction to experiment and accept the change if it improves agreement. This means I apply the PSSM millions of times per fit; performance is critical. In my particular problem, I'm applying a PSSM for an object of length L (~8 bp) at every position of a DNA sequence of length M (~30 bp) (so there are M-L+1 valid positions). I need an efficient algorithm to apply a PSSM. Can anyone help improve performance? My best idea is to convert the DNA into some kind of a matrix so that applying the PSSM is matrix multiplication. There are efficient linear algebra libraries out there (e.g. BLAS), but I'm not sure how best to turn an M-length DNA sequence into a matrix M x 4 matrix and then apply the PSSM at each position. The solution needs to work for higher order/dinucleotide terms in the PSSM - presumably this means representing the sequence-matrix for mono-nucleotides and separately for dinucleotides. My current solution iterates over each position m, then over each letter in word from m to m+L-1, adding the corresponding term in the matrix. I'm storing the matrix as a multi-dimensional STL vector, and profiling has revealed that a lot of the computation time is just accessing the elements of the PSSM (with similar performance bottlenecks accessing the DNA sequence). If someone has an idea besides matrix multiplication, I'm all ears.

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  • HtmlAgilityPack - Vs 2010 - c# ASP - File Not found

    - by Janosch Geigowskoskilu
    First, I've already searched the web & StackOverflow for hours, and i did find a lot about troubleshooting HtmlAgilityPack and tried most of these but nothing worked. The Situation: I'm developing a C# ASP .NET WebPart in SharePoint Foundation. Everything works fine, now I want to Parse a HTML Page to get all ImagePaths and save the Images on HD/Temp. To do that I was downloading HtmlAgilityPack, current version, add reference to Project, everything looks OK, IntelliSense works fine. The Exception: But when I want to run the section where HtmlAgilityPack should be used my Browser shows me a FileNotFoundException - The File or Assembly could not be found. What I tried: After first searches i tried to include v1.4.0 of HtmlAgilityPack cause I read that the current version in some case is not really stable. This works fine to until the point I want to use HtmlAgilityPack, the same Exception. I also tried moving the HtmlAgilityPack direct to the Solution directory, nothing changed. I tried to insert HtmlAgilityPack via using and I tried direct call e.g. HtmlAgilityPack.HtmlDocument. Conclusion : When I compile no error occurs, the reference is set correct. When I trace the HtmlAgilityPack.dll with ProcMon the Path is shown correct, but sometimes the Result is 'File Locked with only Readers' but I don't know enough about ProcMon to Know what this means or if this is critical. It couldn't have something to do with File Permissions because if I check the DLL the permissions are all given.

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  • Mysql Server Optimization

    - by Ish Kumar
    Hi Geeks, We are having serious MySQL(InnoDB) performance issues at a moment when we do: (10-20) insertions on TABLE1 (10-20) updates on TABLE2 Note: Both above operations happens within fraction of a second. And this occurs every few (10-15) minutes. And all online users (approx 400-600) doing read operation on join of TABLE1 & TABLE2 every 1 second. Here is our mysql configuration info: http://docs.google.com/View?id=dfrswh7c_117fmgcmb44 Issues: Lot queries wait and expire later (saw it from phpmyadmin / processes). My poor MySQL server crashes sometimes Questions Q1: Any suggestions to optimize at MySQL level? Q2: I thinking to use persistent connections at application level, is it right? Info Added Later: Database Engine: InnoDB TABLE1 : 400,000 rows (inserting 8,000 daily) & TABLE2: 8,000 rows 1 second query: SELECT b.id, b.user_id, b.description, b.debit, b.created, b.price, u.username, u.email, u.mobile FROM TABLE1 b, TABLE2 u WHERE b.credit = 0 AND b.user_id = u.id AND b.auction_id = "12345" ORDER BY b.id DESC LIMIT 10; // there are few more but they are not so critical. Indexing is good, we are using them wisely. In above query all id's are indexed And TABLE1 has frequent insertions and TABLE2 has frequent updates.

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