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  • C# Neural Networks with Encog

    - by JoshReuben
    Neural Networks ·       I recently read a book Introduction to Neural Networks for C# , by Jeff Heaton. http://www.amazon.com/Introduction-Neural-Networks-C-2nd/dp/1604390093/ref=sr_1_2?ie=UTF8&s=books&qid=1296821004&sr=8-2-spell. Not the 1st ANN book I've perused, but a nice revision.   ·       Artificial Neural Networks (ANNs) are a mechanism of machine learning – see http://en.wikipedia.org/wiki/Artificial_neural_network , http://en.wikipedia.org/wiki/Category:Machine_learning ·       Problems Not Suited to a Neural Network Solution- Programs that are easily written out as flowcharts consisting of well-defined steps, program logic that is unlikely to change, problems in which you must know exactly how the solution was derived. ·       Problems Suited to a Neural Network – pattern recognition, classification, series prediction, and data mining. Pattern recognition - network attempts to determine if the input data matches a pattern that it has been trained to recognize. Classification - take input samples and classify them into fuzzy groups. ·       As far as machine learning approaches go, I thing SVMs are superior (see http://en.wikipedia.org/wiki/Support_vector_machine ) - a neural network has certain disadvantages in comparison: an ANN can be overtrained, different training sets can produce non-deterministic weights and it is not possible to discern the underlying decision function of an ANN from its weight matrix – they are black box. ·       In this post, I'm not going to go into internals (believe me I know them). An autoassociative network (e.g. a Hopfield network) will echo back a pattern if it is recognized. ·       Under the hood, there is very little maths. In a nutshell - Some simple matrix operations occur during training: the input array is processed (normalized into bipolar values of 1, -1) - transposed from input column vector into a row vector, these are subject to matrix multiplication and then subtraction of the identity matrix to get a contribution matrix. The dot product is taken against the weight matrix to yield a boolean match result. For backpropogation training, a derivative function is required. In learning, hill climbing mechanisms such as Genetic Algorithms and Simulated Annealing are used to escape local minima. For unsupervised training, such as found in Self Organizing Maps used for OCR, Hebbs rule is applied. ·       The purpose of this post is not to mire you in technical and conceptual details, but to show you how to leverage neural networks via an abstraction API - Encog   Encog ·       Encog is a neural network API ·       Links to Encog: http://www.encog.org , http://www.heatonresearch.com/encog, http://www.heatonresearch.com/forum ·       Encog requires .Net 3.5 or higher – there is also a Silverlight version. Third-Party Libraries – log4net and nunit. ·       Encog supports feedforward, recurrent, self-organizing maps, radial basis function and Hopfield neural networks. ·       Encog neural networks, and related data, can be stored in .EG XML files. ·       Encog Workbench allows you to edit, train and visualize neural networks. The Encog Workbench can generate code. Synapses and layers ·       the primary building blocks - Almost every neural network will have, at a minimum, an input and output layer. In some cases, the same layer will function as both input and output layer. ·       To adapt a problem to a neural network, you must determine how to feed the problem into the input layer of a neural network, and receive the solution through the output layer of a neural network. ·       The Input Layer - For each input neuron, one double value is stored. An array is passed as input to a layer. Encog uses the interface INeuralData to hold these arrays. The class BasicNeuralData implements the INeuralData interface. Once the neural network processes the input, an INeuralData based class will be returned from the neural network's output layer. ·       convert a double array into an INeuralData object : INeuralData data = new BasicNeuralData(= new double[10]); ·       the Output Layer- The neural network outputs an array of doubles, wraped in a class based on the INeuralData interface. ·        The real power of a neural network comes from its pattern recognition capabilities. The neural network should be able to produce the desired output even if the input has been slightly distorted. ·       Hidden Layers– optional. between the input and output layers. very much a “black box”. If the structure of the hidden layer is too simple it may not learn the problem. If the structure is too complex, it will learn the problem but will be very slow to train and execute. Some neural networks have no hidden layers. The input layer may be directly connected to the output layer. Further, some neural networks have only a single layer. A single layer neural network has the single layer self-connected. ·       connections, called synapses, contain individual weight matrixes. These values are changed as the neural network learns. Constructing a Neural Network ·       the XOR operator is a frequent “first example” -the “Hello World” application for neural networks. ·       The XOR Operator- only returns true when both inputs differ. 0 XOR 0 = 0 1 XOR 0 = 1 0 XOR 1 = 1 1 XOR 1 = 0 ·       Structuring a Neural Network for XOR  - two inputs to the XOR operator and one output. ·       input: 0.0,0.0 1.0,0.0 0.0,1.0 1.0,1.0 ·       Expected output: 0.0 1.0 1.0 0.0 ·       A Perceptron - a simple feedforward neural network to learn the XOR operator. ·       Because the XOR operator has two inputs and one output, the neural network will follow suit. Additionally, the neural network will have a single hidden layer, with two neurons to help process the data. The choice for 2 neurons in the hidden layer is arbitrary, and often comes down to trial and error. ·       Neuron Diagram for the XOR Network ·       ·       The Encog workbench displays neural networks on a layer-by-layer basis. ·       Encog Layer Diagram for the XOR Network:   ·       Create a BasicNetwork - Three layers are added to this network. the FinalizeStructure method must be called to inform the network that no more layers are to be added. The call to Reset randomizes the weights in the connections between these layers. var network = new BasicNetwork(); network.AddLayer(new BasicLayer(2)); network.AddLayer(new BasicLayer(2)); network.AddLayer(new BasicLayer(1)); network.Structure.FinalizeStructure(); network.Reset(); ·       Neural networks frequently start with a random weight matrix. This provides a starting point for the training methods. These random values will be tested and refined into an acceptable solution. However, sometimes the initial random values are too far off. Sometimes it may be necessary to reset the weights again, if training is ineffective. These weights make up the long-term memory of the neural network. Additionally, some layers have threshold values that also contribute to the long-term memory of the neural network. Some neural networks also contain context layers, which give the neural network a short-term memory as well. The neural network learns by modifying these weight and threshold values. ·       Now that the neural network has been created, it must be trained. Training a Neural Network ·       construct a INeuralDataSet object - contains the input array and the expected output array (of corresponding range). Even though there is only one output value, we must still use a two-dimensional array to represent the output. public static double[][] XOR_INPUT ={ new double[2] { 0.0, 0.0 }, new double[2] { 1.0, 0.0 }, new double[2] { 0.0, 1.0 }, new double[2] { 1.0, 1.0 } };   public static double[][] XOR_IDEAL = { new double[1] { 0.0 }, new double[1] { 1.0 }, new double[1] { 1.0 }, new double[1] { 0.0 } };   INeuralDataSet trainingSet = new BasicNeuralDataSet(XOR_INPUT, XOR_IDEAL); ·       Training is the process where the neural network's weights are adjusted to better produce the expected output. Training will continue for many iterations, until the error rate of the network is below an acceptable level. Encog supports many different types of training. Resilient Propagation (RPROP) - general-purpose training algorithm. All training classes implement the ITrain interface. The RPROP algorithm is implemented by the ResilientPropagation class. Training the neural network involves calling the Iteration method on the ITrain class until the error is below a specific value. The code loops through as many iterations, or epochs, as it takes to get the error rate for the neural network to be below 1%. Once the neural network has been trained, it is ready for use. ITrain train = new ResilientPropagation(network, trainingSet);   for (int epoch=0; epoch < 10000; epoch++) { train.Iteration(); Debug.Print("Epoch #" + epoch + " Error:" + train.Error); if (train.Error > 0.01) break; } Executing a Neural Network ·       Call the Compute method on the BasicNetwork class. Console.WriteLine("Neural Network Results:"); foreach (INeuralDataPair pair in trainingSet) { INeuralData output = network.Compute(pair.Input); Console.WriteLine(pair.Input[0] + "," + pair.Input[1] + ", actual=" + output[0] + ",ideal=" + pair.Ideal[0]); } ·       The Compute method accepts an INeuralData class and also returns a INeuralData object. Neural Network Results: 0.0,0.0, actual=0.002782538818034049,ideal=0.0 1.0,0.0, actual=0.9903741937121177,ideal=1.0 0.0,1.0, actual=0.9836807956566187,ideal=1.0 1.0,1.0, actual=0.0011646072586172778,ideal=0.0 ·       the network has not been trained to give the exact results. This is normal. Because the network was trained to 1% error, each of the results will also be within generally 1% of the expected value.

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  • iftop - how to generate text file with its output?

    - by mickula
    iftop is great tool to view almost live bandwidth usage distinguished by source-ip source-port destination-ip destination port. I'm using it to see which client's ip is using most bandwidth. Now I would like to store output somewhere. iftop uses ncurses so iftop > log.txt does not work as expected, result file is not readable. Is there any tool like this which can be used to pipe output to a text file? Thanks for your replies.

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  • How can I use a delimiter in wmic output, separating columns?

    - by Abhishek Simon
    I want to fetch Windows Hotfix listing with some format, whose output can be separated with some delimiter. so far I found a wmic command which gives me a desired output but the problem is the \s delimiter is not going to work here. Is there a way I can place some , or anyother character, which I can later use in java program to get individual columns? Command wmic qfe get caption,csname,description,hotfixid,installedby,installedon Output Caption CSName Description HotFixID InstalledBy InstalledOn http://go.microsoft.com/fwlink/?LinkId=161784 Abhishek Update KB971033 NT AUTHORITY\SYSTEM 3/15/2012 http://support.microsoft.com/?kbid=2032276 Abhishek Security Update KB2032276 NT AUTHORITY\SYSTEM 3/15/2012 .. . Update I am trying for /f "tokens=1,2,3,4,5,6,7,8,9,10,11" %g in ('wmic qfe get caption,csname,description,fixcomments,hotfixid,installdate,installedby,installedon,name,servicepackineffect,status') do @echo %g,%h,%i,%j,%k,%l,%m,%n,%o,%p but it gives me invalid GET Expression C:\Users\Abhishek\Desktop>for /f "tokens=1,2,3,4,5,6,7,8,9,10,11" %g in ('wmic qfe get caption,csname,description,fixcomments,hotfixid,installdate,installedby,installedon,name,servicepackineffect,status') do @echo %g,%h,%i,%j,%k,%l,%m,%n,%o,%p Invalid GET Expression. What is the problem here? This might solve the problem for me . More Update I even tried the below command but this too does not solve space problem Command for /f "tokens=1,2,3,4,5,6,7,8,9,10,11" %g in ('wmic qfe list') do @echo %g,%h,%i,%j,%k,%l,%m,%n,%o,%p Output Caption,CSName,Description,FixComments,HotFixID,InstallDate,InstalledBy,InstalledOn,Name,ServicePackInEffect http://go.microsoft.com/fwlink/?LinkId=161784,Abhishek,Update,KB971033,NT,AUTHOR,,Y\SYSTEM,3/15/2012, http://support.microsoft.com/?kbid=2281679,Abhishek,Security,Update,KB2281679,NT,AUTHORITY\SYSTEM,3/15/2012, http://support.microsoft.com/?kbid=2284742,Abhishek,Update,KB2284742,NT,AUTHORIT,,SYSTEM,3/15/2012, http://support.microsoft.com/?kbid=2286198,Abhishek,Security,Update,KB2286198,NT,AUTHORITY\SYSTEM,3/15/2012,

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  • Managed server not starting up however Admin console is up.

    - by Preet
    Hi, Scenario: If i try to start the server as a window service it gives an error stating that ceradentials are not correct.However on correcting the credentials in boot.properties when i try to start the server again it gives the same error.Any alternative for starting the server.I gave the same username and password in my startup Script and Boot.properties. Scenario 2: If i start the server remotely through console then will it come up? Thanks in advance. Regards, Preet

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  • Make mysqldump output USE statements or full table names when dumping a single table with where clause

    - by tobyodavies
    Is it possible to get mysqldump to output USE statements for a single (partial) table dump? I've already got some scripts that I'd like to reuse which run mysqldump with some arguments and apply them to a remote server. However, since I haven't bothered to parse all the arguments to mysqldump, and there is no USE in the dump, the remote server is saying no database selected. I'm a programmer more than anything else, so I can easily use sed to modify the dump before applying it in the worst case, but those scripts won't allow me to do this as I don't have access to the dump between creation and application. EDIT: the ability to output fully qualified table names may also solve my problem

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  • Getting Vars to bind properly across multiple files

    - by Alex Baranosky
    I am just learning Clojure and am having trouble moving my code into different files. I keep detting this error from the appnrunner.clj - Exception in thread "main" java.lang.Exception: Unable to resolve symbol: -run-application in this context It seems to be finding the namespaces fine, but then not seeing the Vars as being bound... Any idea how to fix this? Here's my code: APPLICATION RUNNER - (ns src/apprunner (:use src/functions)) (def input-files [(resource-path "a.txt") (resource-path "b.txt") (resource-path "c.txt")]) (def output-file (resource-path "output.txt")) (defn run-application [] (sort-files input-files output-file)) (-run-application) APPLICATION FUNCTIONS - (ns src/functions (:use clojure.contrib.duck-streams)) (defn flatten [x] (let [s? #(instance? clojure.lang.Sequential %)] (filter (complement s?) (tree-seq s? seq x)))) (defn resource-path [file] (str "C:/Users/Alex and Paula/Documents/SoftwareProjects/MyClojureApp/resources/" file)) (defn split2 [str delim] (seq (.split str delim))) (defstruct person :first-name :last-name) (defn read-file-content [file] (apply str (interpose "\n" (read-lines file)))) (defn person-from-line [line] (let [sections (split2 line " ")] (struct person (first sections) (second sections)))) (defn formatted-for-display [person] (str (:first-name person) (.toUpperCase " ") (:last-name person))) (defn sort-by-keys [struct-map keys] (sort-by #(vec (map % [keys])) struct-map)) (defn formatted-output [persons output-number] (let [heading (str "Output #" output-number "\n") sorted-persons-for-output (apply str (interpose "\n" (map formatted-for-display (sort-by-keys persons (:first-name :last-name)))))] (str heading sorted-persons-for-output))) (defn read-persons-from [file] (let [lines (read-lines file)] (map person-from-line lines))) (defn write-persons-to [file persons] (dotimes [i 3] (append-spit file (formatted-output persons (+ 1 i))))) (defn sort-files [input-files output-file] (let [persons (flatten (map read-persons-from input-files))] (write-persons-to output-file persons)))

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  • How do I check if output stream of a socket is closed?

    - by Roman
    I have this code: public void post(String message) { output.close(); final String mess = message; (new Thread() { public void run() { while (true) { try { output.println(mess); System.out.println("The following message was successfully sent:"); System.out.println(mess); break; } catch (NullPointerException e) { try {Thread.sleep(1000);} catch (InterruptedException ie) {} } } } }).start(); } As you can see I close the socket in the very beginning of the code and then try to use it to send some information to another computer. The program writes me "The following message was successfully sent". It means that the NullPointerException was not thrown. So, does Java throw no exception if it tries to use a closed output stream of a socket? Is there a way to check if a socket is closed or opened? ADDED I initialize the socket in the following way: clientSideSocket = new Socket(hostname,port); PrintWriter out = new PrintWriter(clientSideSocket.getOutputStream(), true); browser.output = out;

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  • cl.exe Difference in object files when /E output is the same and flags are the same

    - by madiyaan damha
    Hello: I am using Visual Studio 2005's cl.exe compiler. I call it with a bunch of /I /D and some compilation/optimization flags (example: /Ehsc). I have two compilation scripts, and both differ only in the /I flags (include directories are different). All other flags are the same. These scripts produce different object files (and not just a timestamp difference as noted below). The strange thing is that the /E output of both scripts is the same. That means that the include files are not causing the difference in object files, but then again, where is the difference coming from? Can anyone elucidate on how I am seeing two different object files in my situation. If the include files are causing the difference, how come I see identical /E output? PS. The object files are different not only in the timestamp, but in the code sections also. In fact the behavior of my final executable is different in both cases. Edit: PSS: I even looked at the /includeFiles output of cl.exe and that output is identical. The object files, however, differ in more than just the timestamp (in fact, one is 1KB bigger than another!)

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  • How can I capture Rake output when invoked from with a Ruby script?

    - by Adrian O'Connor
    I am writing a web-based dev-console for Rails development. In one of my controller actions, I am calling Rake, but I am unable to capture any of the output that Rake generates. For example, here is some sample code, from the controller: require 'rake' require 'rake/rdoctask' require 'rake/testtask' require 'tasks/rails' require 'stringio' ... def show_routes @results = capture_stdout { Rake.tasks['routes'].invoke } # @results is nil -- the capture_stdout doesn't catpure anything that Rake generates end def capture_stdout s = StringIO.new $stdout = s yield s.string ensure $stdout = STDOUT end Does anybody know why I can't capture the Rake output? I've tried going through the Rake source, and I can't see where it fires a new process or anything, so I think I ought to be able to do this. Many thanks! Adrian I have since discovered the correct way to call Rake from inside Ruby that works much better: Rake.application['db:migrate:redo'].reenable Rake.application['db:migrate:redo'].invoke Strangely, some rake tasks work perfectly now (routes), some capture the output the first time the run and after that are always blank (db:migrate:redo) and some don't seem to ever capture output (test). Odd.

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  • do console apps run faster than windows based app?

    - by omair iqbal
    i am reletivly new to world of programming i have a few performance questions 1. do console apps run faster than windows based app? 2.are languages like c and pascal faster than object oriented languages like c++ and delphi?i know language speed depends more on compiler than on language itself but do compilers for prcedural languages like c and pascal produce faster code than oo ones like delphi,c++(including c++ compilers that can procuce c code) sorry for my bad english

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  • How do you sink input and output to a text file in R?

    - by Jeromy Anglim
    How do you sink both the console input and the console output to a text file? Take the following code: sink("temp.txt") 1:10 sink() It will write a text file that looks like this: [1] 1 2 3 4 5 6 7 8 9 10 But how do I create a text file that looks like this: > 1:10 [1] 1 2 3 4 5 6 7 8 9 10 I've looked at ?sink and searched R-help.

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  • converting a Tree to newick format. java

    - by Esmond
    I'm having problems converting a binary rooted tree to newick format. The full explanation for such a format can be found: http://code.google.com/p/mrsrf/wiki/NewickTree An example of a newick format would be as follows: for a tree T such as http://www.cs.mcgill.ca/~cs251/OldCourses/1997/topic8/images/completetreetwo.gif the newick representation would be: (((8,9),(10,11)),((12,13),(14,15))) the internal node will become the commas while the leaves will be retained. such trees have internal nodes which will always have 2 children. I have a problem using recursion to come out with this newick format. The output contains far too many nodes and braces. Any comments to resolve this problem is appreciated or even an iterative algorithm would be welcomed import java.util.Stack; public class Tree { .... public String inOrderNewick(Node root, String output) throws ItemNotFoundException { if (root.hasChild()) { output += "("; output += inOrderNewick(root.child1, output); output += ","; output += inOrderNewick(root.child2, output); output += ")"; return output; } else { output += root.getSeq(); return output; } } }

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  • Restart program from a certain line with an if statement?

    - by user1744093
    could anyone help me restart my program from line 46 if the user enters 1 (just after the comment where it states that the next code is going to ask the user for 2 inputs) and if the user enters -1 end it. I cannot think how to do it. I'm new to C# any help you could give would be great! class Program { static void Main(string[] args) { //Displays data in correct Format List<float> inputList = new List<float>(); TextReader tr = new StreamReader("c:/users/tom/documents/visual studio 2010/Projects/DistanceCalculator3/DistanceCalculator3/TextFile1.txt"); String input = Convert.ToString(tr.ReadToEnd()); String[] items = input.Split(','); Console.WriteLine("Point Latitude Longtitude Elevation"); for (int i = 0; i < items.Length; i++) { if (i % 3 == 0) { Console.Write((i / 3) + "\t\t"); } Console.Write(items[i]); Console.Write("\t\t"); if (((i - 2) % 3) == 0) { Console.WriteLine(); } } Console.WriteLine(); Console.WriteLine(); // Ask for two inputs from the user which is then converted into 6 floats and transfered in class Coordinates Console.WriteLine("Please enter the two points that you wish to know the distance between:"); string point = Console.ReadLine(); string[] pointInput = point.Split(' '); int pointNumber = Convert.ToInt16(pointInput[0]); int pointNumber2 = Convert.ToInt16(pointInput[1]); Coordinates distance = new Coordinates(); distance.latitude = (Convert.ToDouble(items[pointNumber * 3])); distance.longtitude = (Convert.ToDouble(items[(pointNumber * 3) + 1])); distance.elevation = (Convert.ToDouble(items[(pointNumber * 3) + 2])); distance.latitude2 = (Convert.ToDouble(items[pointNumber2 * 3])); distance.longtitude2 = (Convert.ToDouble(items[(pointNumber2 * 3) + 1])); distance.elevation2 = (Convert.ToDouble(items[(pointNumber2 * 3) + 2])); //Calculate the distance between two points const double PIx = 3.141592653589793; const double RADIO = 6371; double dlat = ((distance.latitude2) * (PIx / 180)) - ((distance.latitude) * (PIx / 180)); double dlon = ((distance.longtitude2) * (PIx / 180)) - ((distance.longtitude) * (PIx / 180)); double a = (Math.Sin(dlat / 2) * Math.Sin(dlat / 2)) + Math.Cos((distance.latitude) * (PIx / 180)) * Math.Cos((distance.latitude2) * (PIx / 180)) * (Math.Sin(dlon / 2) * Math.Sin(dlon / 2)); double angle = 2 * Math.Atan2(Math.Sqrt(a), Math.Sqrt(1 - a)); double ultimateDistance = (angle * RADIO); Console.WriteLine("The distance between your two points is..."); Console.WriteLine(ultimateDistance); //Repeat the program if the user enters 1, end the program if the user enters -1 Console.WriteLine("If you wish to calculate another distance type 1 and return, if you wish to end the program, type -1."); Console.ReadLine(); if (Convert.ToInt16(Console.ReadLine()) == 1); { //here is where I need it to repeat }

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  • Ecmascript 5 Date.parse for ISO 8601 test cases

    - by 4esn0k
    What results is right for next test cases? //Chrome Opera Firefox IE 9 Safari console.log(Date.parse("2012-11-31T23:59:59.000Z"));//1354406399000 NaN NaN 1354406399000 NaN console.log(Date.parse("2012-12-31T23:59:59.000Z"));//1356998399000 1356998399000 1356998399000 1356998399000 1356998399000 console.log(Date.parse("2012-12-31T23:59:60.000Z"));//NaN NaN NaN NaN 1356998400000 console.log(Date.parse("2012-04-04T05:02:02.170Z"));//1333515722170 1333515722170 1333515722170 1333515722170 1333515722170 console.log(Date.parse("2012-04-04T24:00:00.000Z"));//NaN 1333584000000 1333584000000 1333584000000 1333584000000 console.log(Date.parse("2012-04-04T24:00:00.500Z"));//NaN NaN 1333584000500 1333584000500 NaN

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  • Is it possible to limit output bandwidth between eth0 and lo?

    - by mmcbro
    I'm trying to limit the bandwidth between my eth0 output (nginx proxy) to my loopback inteface (apache) by filtering on destination port. Incoming Packet -> Eth0 -> 0.0.0.0:80 Nginx -> tc qdisc class/iptable mangle 2525port -> 127.0.0.1:2525 Apache I don't know if it's even possible I'm just experimenting. My rules are the followings : tc qdisc add dev eth0 root handle 1:0 htb tc class add dev eth0 parent 1:0 classid 1:10 htb rate 2mbps ceil 2mbps prio 0 tc filter add dev eth0 parent 1:0 prio 0 protocol ip handle 10 fw flowid 1:10 iptables -A OUTPUT -t mangle -p tcp --dport 2525 -j MARK --set-mark 10 I also tried to with FORWARD chain but its still the same.

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  • update terminal title from standard output of long running command?

    - by Sam Hasler
    I'd like to change the title of a terminal window during a long running command (for example: git svn fetch) with values greped from the output, whilst still writing to standard output. Is this possible using named pipes or tee and xargs? I'm thinking something like git svn fetch | sed "s/^\(r\d*\).*$/ \"\\\033]0;\"\1\"\\\007\"/" | xargs -l1 echo -ne based on: http://tldp.org/HOWTO/Xterm-Title-3.html Update: getting this to work would be enough: (echo "r9" ; echo "r10") | sed "s/^\(r\d*\).*$/ \"\\\033]0;\"\1\"\\\007\"/" | xargs -l1 echo -ne Update 2: This almost does what I want. I see r10, but not r9: (echo "r9" ; sleep 1 ; echo "r10") | sed "s/^\(r[0-9]*\)\.*$/\\\033]0;\1\\\007/" | xargs -0 echo -ne

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