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• Question about MySQLdb, OS X 10.5, and authentication

  - by timpone

  I'm a noob at Python and have been having problems with MySQLdb and OS X Leopard 10.5. I have a php app that is doing db access just fine with pdo but also want to access with Python. When I use the same credentials with MySQLdb as php, I get the following error: File "build/bdist.macosx-10.5-i386/egg/MySQLdb/connections.py", line 188, in __init__ _mysql_exceptions.OperationalError: (1045, "Access denied for user 'arc_db'@'localhost' (using password: YES)") The authentication piece works fine on my ubuntu server (installed via apt-get) implying that it is something specific to my OS X MySQLdb install. Looking at some postings, I thought it would be my local build of MySQLdb which seems to be problematic with OS X. But I am able to import fine: Python 2.5.1 (r251:54863, Feb 6 2009, 19:02:12) [GCC 4.0.1 (Apple Inc. build 5465)] on darwin Type "help", "copyright", "credits" or "license" for more information. >>> import MySQLdb >>> Also, wanting to create a positive, I am able to access and return results from a database tilted test_something (which presumably bypasses the MySQL's authtentication - not sure exactly how though). Trying to figure out a little more what is going on, I turn on logging for mysql and get the following (added my own comments): 100609 19:09:45 3 Connect Access denied for user 'arc_db'@'localhost' (using password: YES) //not worked 100609 19:10:02 4 Connect arc_db@localhost on arc_development //did work I'm not really sure what the 3 or 4 means but presumably a sucess or failue. So, I guess what would be the next step? Am I doing some obvious stupid python mistake (very likely)? Is there a better way for me to prove that this should / can be working? Is there any way to determine what MySQLdb is sending exactly in its authentication message to MySQL? thanks

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• how to install mysqlDb for MySQL and Python ON WINDOWS

  - by Spikie

  I AM A NET DEVELOPER TRY TO INSTALL MYSQLDB FOR PYTHON I KEEP HAVING THIS ERROR MESSAGE raise ImproperlyConfigured("Error loading MySQLdb module: %s" % e) django.core.exceptions.ImproperlyConfigured: Error loading MySQLdb module: No module named MySQLdb I AM FOLLOWING THIS INSTRUCTION FROM THIS SITE <"http://sourceforge.net/project/shownotes.php?release_id=303257" I DO NOT UNDERSTAND THESE LINES Windows ....... C:... python setup.py install C:... python setup.py bdist_wininst The latter example should build a Windows installer package, if you have the correct tools. In any event, you must have a C compiler. Additionally, you have to set an environment variable (mysqlroot) which is the path to your MySQL installation. In theory, it would be possible to get this information out of the registry, but like I said, I don't do Windows, but I'll accept a patch that does this. I HAVE BEEN SEARCHING FOR ANSWER ALL DAY PLEASE DO ANYBODY REALLY KNOW HOW TO DO THIS OR AT LEAST POINT ME IN THE RIGHT DIRECTION???? THANKS and what is the c compiler for???????

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• MySQLdb not INSERTING, _mysql does fine.

  - by Mad_Casual

  Okay, I log onto the MySQL command-line client as root. I then open or otherwise run a python app using the MySQLdb module as root. When I check the results using python (IDLE), everything looks fine. When I use the MySQL command-line client, no INSERT has occurred. If I change things around to _mysql instead of MySQLdb, everything works fine. I'd appreciate any clarification(s). "Works" until IDLE/Virtual machine is reset: <pre><code>import MySQLdb db = MySQLdb.connect(user='root', passwd='*******',db='test') cursor = db.cursor() cursor.execute("""INSERT INTO test VALUES ('somevalue');""",)</code></end> Works: <pre><code>import _mysql db = _mysql.connect(user='root', passwd='*******',db='test') db.query("INSERT INTO test VALUES ('somevalue');")</code></end> System info: Intel x86 WinXP Python 2.5 MySQL 5.1.41 MySQL-Python 1.2.2

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• Python Django MySQLdb setup problem:: setup.py dosen't build due to incorrect location of mysql

  - by 108860375137931889948

  I'm trying to install MySQLdb for python. but when I run the setup, this is the error I get. well I know why its giving all the missing file statements, but dont know where to change the bold marked location from. Please help gaurav-toshniwals-macbook-7:MySQL-python-1.2.3c1 gauravtoshniwal$ python setup.py build running build running build_py copying MySQLdb/release.py - build/lib.macosx-10.3-fat-2.6/MySQLdb running build_ext building '_mysql' extension gcc-4.0 -arch ppc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -Dversion_info=(1,2,3,'gamma',1) -D_version_=1.2.3c1 -I/Applications/MAMP/Library/include/mysql -I/Library/Frameworks/Python.framework/Versions/2.6/include/python2.6 -c _mysql.c -o build/temp.macosx-10.3-fat-2.6/_mysql.o _mysql.c:36:23: error: my_config.h: No such file or directory _mysql.c:36:23: error: my_config.h: No such file or directory _mysql.c:38:19: error: mysql.h: No such file or directory _mysql.c:38:19:_mysql.c:39:26: error: mysqld_error.h: No such file or directory error: _mysql.c:40:20:mysql.h: No such file or directory

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• Python-MySQLdb problem: wrong ELF class: ELFCLASS32

  - by jsalonen

  As part of trying out django CMS (http://www.django-cms.org/), I'm struggling with getting Python-MySQLdb to work (http://pypi.python.org/pypi/MySQL-python/). I have installed Django CMS and all of its dependencies (Python 2.5, Django, django-south, MySQL server) I'm trying out the example code within Django CMS code with MySQL as chosen database type When I execute python manage.py syncdb, the following error occurs: django.core.exceptions.ImproperlyConfigured: Error loading MySQLdb module: /root/.python-eggs/MySQL_python-1.2.3c1-py2.5-linux-i686.egg-tmp/_mysql.so: wrong ELF class: ELFCLASS32 I have been able to trace the problem specifically to python-mySQLdb (as also visible in the stack trace). Other than that, I am completely puzzled. I don't have a clue what ELFCLASS32 means, or what ELF class is anyway. I suspect that this error could have something to do with the fact that I am running 64-bit version of Debian 5 (on a VPS). Any good ideas how to troubleshoot?

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• warning in python with MySQLdb

  - by juanpablo

  hi, when I use MySQLdb get this message: /var/lib/python-support/python2.6/MySQLdb/init.py:34: DeprecationWarning: the sets module is deprecated from sets import ImmutableSet I try filter the warning with import warnings warnings.filterwarnings("ignore", message="the sets module is deprecated from sets import ImmutableSet") but, I not get changes. any suggestion? Many thanks.

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• Problem installing MySQLdb on windows - Can't find python

  - by aldux

  I'm trying to install the module mySQLdb on a windows vista 64 (amd) machine. I've installed python on a different folder other than suggested by Python installer. When I try to install the .exe mySQLdb installer, it can't find python 2.5 and it halts the installation. Is there anyway to supply the installer with the correct python location (even thou the registry and path are right)?

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• Python + MySQLdb executemany

  - by lhahne

  I'm using Python and its MySQLdb module to import some measurement data into a Mysql database. The amount of data that we have is quite high (currently about ~250 MB of csv files and plenty of more to come). Currently I use cursor.execute(...) to import some metadata. This isn't problematic as there are only a few entries for these. The problem is that when I try to use cursor.executemany() to import larger quantities of the actual measurement data, MySQLdb raises a TypeError: not all arguments converted during string formatting My current code is def __insert_values(self, values): cursor = self.connection.cursor() cursor.executemany(""" insert into values (ensg, value, sampleid) values (%s, %s, %s)""", values) cursor.close() where values is a list of tuples containing three strings each. Any ideas what could be wrong with this? Edit: The values are generated by yield (prefix + row['id'], row['value'], sample_id) and then read into a list one thousand at a time where row is and iterator coming from csv.DictReader.

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• Python and MySQLdb

  - by rohanbk

  I have the following query that I'm executing using a Python script (by using the MySQLdb module). conn=MySQLdb.connect (host = "localhost", user = "root",passwd = "<password>",db = "test") cursor = conn.cursor () preamble='set @radius=%s; set @o_lat=%s; set @o_lon=%s; '%(radius,latitude,longitude) query='SELECT *, 6371*1000 * acos(cos(radians(@o_lat)) * cos(radians(lat)) * cos(radians(lon) - radians(@o_lon)) + sin(radians(@o_lat)) * sin(radians(lat))) as distance FROM poi_table HAVING distance < @radius ORDER BY distance ASC LIMIT 0, 50' complete_query=preamble+query results=cursor.execute (complete_query) print results The values of radius, latitude, and longitude are not important, but they are being defined when the script executes. What bothers me is that the snippet of code above returns no results; essentially meaning that the way that the query is being executed is wonky. I executed the SQL query (including the set variables with actual values, and it returned the correct number of results). If I modify the query to just be a simple SELECT FROM query (SELECT * FROM poi_table) it returns results. What is going on here?

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• ImportError: No module named MySQLdb in Zope

  - by offex

  I can import MySQLdb from the interactive python command line but Zope gives me an import error when I try it from within a script (python) in Zope. Could Zope be not looking in the same places as the command line for some reason?

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• Python MySQLdb LOAD LOCAL INFILE problems

  - by belvoir

  The problem is a simple one. When I execute the following I get different results depending on whether I run it from the MySQL console and from inside a Python Script using MySQLdb: LOAD DATA LOCAL INFILE '/tmp/source.csv' INTO TABLE test FIELDS TERMINATED BY '|' IGNORE 1 LINES; Console gives the following results: Records: 35002 Deleted: 0 Skipped: 0 Warnings: 0 Python (via .info()) returns the following: Records: 34977 Deleted: 0 Skipped: 0 Warnings: 8 So in summary, same source file, same SQL request, different results. From the console I can 'SHOW WARNINGS' an get a better handle on which records are causing the problems and why but from Python I can't idenitify how to do this or more importantly what the cause of the problem could be. Any suggestions? MySQL Server '5.1.41-3ubuntu12.1' Python '2.6.5' Tables are MyISAM

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• Can't get MySQL source query to work using Python mysqldb module

  - by Chris

  I have the following lines of code: sql = "source C:\\My Dropbox\\workspace\\projects\\hosted_inv\\create_site_db.sql" cursor.execute (sql) When I execute my program, I get the following error: Error 1064: You have an error in your SQL syntax; check the manual that corresponds to your MySQL server version for the right syntax to use near 'source C:\My Dropbox\workspace\projects\hosted_inv\create_site_db.sql' at line 1 Now I can copy and past the following into mysql as a query: source C:\\My Dropbox\\workspace\\projects\\hosted_inv\\create_site_db.sql And it works perfect. When I check the query log for the query executed by my script, it shows that my query was the following: source C:\\My Dropbox\\workspace\\projects\\hosted_inv\\create_site_db.sql However, when I manually paste it in and execute, the entire create_site_db.sql gets expanded in the query log and it shows all the sql queries in that file. Am I missing something here on how mysqldb does queries? Am I running into a limitation. My goal is to run a sql script to create the schema structure, but I don't want to have to call mysql in a shell process to source the sql file. Any thoughts? Thanks!

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• Cache the result of a MySQLdb database query in memory

  - by ensnare

  Our application fetches the correct database server from a pool of database servers. So each query is really 2 queries, and they look like this: Fetch the correct DB server Execute the query We do this so we can take DB servers online and offline as necessary, as well as for load-balancing. But the first query seems like it could be cached to memory, so it only actually queries the database every 5 or 10 minutes or so. What's the best way to do this? Thanks.

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• python mysqldb string formatting

  - by Daniel

  How do I do this correctly: I want to do a query like this: query = """SELECT * FROM sometable order by %s %s limit %s, %s;""" conn = app_globals.pool.connection() cur = conn.cursor() cur.execute(query, (sortname, sortorder, limit1, limit2) ) results = cur.fetchall() All works fine but the order by %s %s is not putting the strings in correctly. It is putting the two substitutions in with quotes around them. So it ends up like: ORDER BY 'somecol' 'DESC' Which is wrong should be: ORDER BY somecol DESC Any help greatly appreciated!

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• Python MySQLdb placeholders syntax

  - by ensnare

  I'd like to use placeholders as seen in this example: cursor.execute (""" UPDATE animal SET name = %s WHERE name = %s """, ("snake", "turtle")) Except I'd like to have the query be its own variable as I need to insert a query into multiple databases, as in: query = """UPDATE animal SET name = %s WHERE name = %s """, ("snake", "turtle")) cursor.execute(query) cursor2.execute(query) cursor3.execute(query) What would be the proper syntax for doing something like this?

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• python MySQLdb got invalid syntax when trying to INSERT INTO table

  - by Michelle Jun Lee

  ## COMMENT OUT below just for reference "" cursor.execute (""" CREATE TABLE yellowpages ( business_id BIGINT(20) NOT NULL AUTO_INCREMENT, categories_name VARCHAR(255), business_name VARCHAR(500) NOT NULL, business_address1 VARCHAR(500), business_city VARCHAR(255), business_state VARCHAR(255), business_zipcode VARCHAR(255), phone_number1 VARCHAR(255), website1 VARCHAR(1000), website2 VARCHAR(1000), created_date datetime, modified_date datetime, PRIMARY KEY(business_id) ) """) "" ## TOP COMMENT OUT (just for reference) ## code website1g = "http://www.triman.com" business_nameg = "Triman Sales Inc" business_address1g = "510 E Airline Way" business_cityg = "Gardena" business_stateg = "CA" business_zipcodeg = "90248" phone_number1g = "(310) 323-5410" phone_number2g = "" website2g = "" cursor.execute (""" INSERT INTO yellowpages(categories_name, business_name, business_address1, business_city, business_state, business_zipcode, phone_number1, website1, website2) VALUES ('%s','%s','%s','%s','%s','%s','%s','%s','%s') """, (''gas-stations'', business_nameg, business_address1g, business_cityg, business_stateg, business_zipcodeg, phone_number1g, website1g, website2g)) cursor.close() conn.close() I keep getting this error File "testdb.py", line 51 """, (''gas-stations'', business_nameg, business_address1g, business_cityg, business_stateg, business_zipcodeg, phone_number1g, website1g, website2g)) ^ SyntaxError: invalid syntax any idea why? By the way, the up arrow is pointing to website1g (the b character) . Thanks for the help in advance

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• MySQLdb through proxy

  - by MihaiD

  I'm using the above mentioned Python lib to connect to a MySQL server. So far I've worked locally and all worked fine, until i realized I'll have to use my program in a network where all access goes through a proxy. Does anyone now how I can set the connections managed by that lib to use a proxy? Alternatively: do you know of another Python lib for MySQL that can handle this? I also have no idea if the if the proxy server will allow access to the standard MySQL port or how I can trick it to allow it. Help on this is also welcomed.

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• Installing Django on Shared Server: No module named MySQLdb?

  - by Mark

  I'm getting this error Traceback (most recent call last): File "/home/<username>/flup/server/fcgi_base.py", line 558, in run File "/home/<username>/flup/server/fcgi_base.py", line 1116, in handler File "/home/<username>/python/django/django/core/handlers/wsgi.py", line 241, in __call__ response = self.get_response(request) File "/home/<username>/python/django/django/core/handlers/base.py", line 73, in get_response response = middleware_method(request) File "/home/<username>/python/django/django/contrib/sessions/middleware.py", line 10, in process_request engine = import_module(settings.SESSION_ENGINE) File "/home/<username>/python/django/django/utils/importlib.py", line 35, in import_module __import__(name) File "/home/<username>/python/django/django/contrib/sessions/backends/db.py", line 2, in ? from django.contrib.sessions.models import Session File "/home/<username>/python/django/django/contrib/sessions/models.py", line 4, in ? from django.db import models File "/home/<username>/python/django/django/db/__init__.py", line 41, in ? backend = load_backend(settings.DATABASE_ENGINE) File "/home/<username>/python/django/django/db/__init__.py", line 17, in load_backend return import_module('.base', 'django.db.backends.%s' % backend_name) File "/home/<username>/python/django/django/utils/importlib.py", line 35, in import_module __import__(name) File "/home/<username>/python/django/django/db/backends/mysql/base.py", line 13, in ? raise ImproperlyConfigured("Error loading MySQLdb module: %s" % e) ImproperlyConfigured: Error loading MySQLdb module: No module named MySQLdb when I try to run this script on my shared server #!/usr/bin/python import sys, os sys.path.insert(0, "/home/<username>/python/django") sys.path.insert(0, "/home/<username>/python/django/www") # projects directory os.chdir("/home/<username>/python/django/www/<project>") os.environ['DJANGO_SETTINGS_MODULE'] = "<project>.settings" from django.core.servers.fastcgi import runfastcgi runfastcgi(method="threaded", daemonize="false") But, my web host just installed MySQLdb for me a few hours ago. When I run python from the shell I can import MySQLdb just fine. Why would this script report that it can't find it?

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• mysqldb python escaping ? or %s?

  - by asldkncvas

  Dear Everyone, I am currently using mysqldb. What is the correct way to escape strings in mysqldb arguments? Note that E = lambda x: x.encode('utf-8') 1) so my connection is set with charset='utf8'. These are the errors I am getting for these arguments: w1, w2 = u'??', u'??' 1) self.cur.execute("SELECT dist FROM distance WHERE w1=? AND w2=?", (E(w1), E(w2))) ret = self.cur.execute("SELECT dist FROM distance WHERE w1=? AND w2=?", (E(w1), E(w2)) ) File "build/bdist.linux-i686/egg/MySQLdb/cursors.py", line 158, in execute TypeError: not all arguments converted during string formatting 2) self.cur.execute("SELECT dist FROM distance WHERE w1=%s AND w2=%s", (E(w1), E(w2))) This works fine, but when w1 or w2 has \ inside, then the escaping obviously failed. I personally know that %s is not a good method to pass in arguemnts due to injection attacks etc.

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• Lost connection to MySQL server during query

  - by Otavio

  I have a huge table and I need to process all rows in it. I'm always getting this Lost connection message and I'm not able to reconnect and restore the cursor to the last position it was. This is basically the code I have here: # import MySQLdb class DB: conn = None def connect(self): self.conn = MySQLdb.connect('hostname', 'user', '*****', 'some_table', cursorclass=MySQLdb.cursors.SSCursor) def query(self, sql): try: cursor = self.conn.cursor() cursor.execute(sql) except (AttributeError, MySQLdb.OperationalError): self.connect() cursor = self.conn.cursor() cursor.execute(sql) return cursor # # db = DB() sql = "SELECT bla FROM foo" data = db.query(sql) for row in data: do_something(row) # But I'm always getting this: # Traceback (most recent call last): File "teste.py", line 124, in <module> run() File "teste.py", line 109, in run for row in data: File "/usr/lib64/python2.5/site-packages/MySQLdb/cursors.py", line 417, in next row = self.fetchone() File "/usr/lib64/python2.5/site-packages/MySQLdb/cursors.py", line 388, in fetchone r = self._fetch_row(1) File "/usr/lib64/python2.5/site-packages/MySQLdb/cursors.py", line 285, in _fetch_row return self._result.fetch_row(size, self._fetch_type) _mysql_exceptions.OperationalError: (2013, 'Lost connection to MySQL server during query') Exception _mysql_exceptions.OperationalError: (2013, 'Lost connection to MySQL server during query') in <bound method SSCursor.__del__ of <MySQLdb.cursors.SSCursor object at 0x7f7e3c8da410>> ignored # Do you have any idea?

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• How to install MySQLdb package? (ImportError: No module named setuptools)

  - by Verrtex

  Hi All, I am trying to install MySQLdb package. I found the source code here. I did the following: gunzip MySQL-python-1.2.3c1.tar.gz tar xvf MySQL-python-1.2.3c1.tar cd MySQL-python-1.2.3c1 python setup.py build As the result I got the following: Traceback (most recent call last): File "setup.py", line 5, in ? from setuptools import setup, Extension ImportError: No module named setuptools Does anybody knows how to solve this problem? By the way, if I am able to do the described step, I will need to do the following: sudo python setup.py install And I have no system-administrator-rights. Do I still have a chance to install MySQLdb? Thank you.

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• How to use Python list comprehension (or such) for retrieving rows when using MySQLdb?

  - by Erik Nygren

  Hey all, I use MySQLdb a lot when dealing with my webserver. I often find myself repeating the lines: row = cursor.fetchone() while row: do_processing(row) row = cursor.fetchone() Somehow this strikes me as somewhat un-pythonic. Is there a better, one-line way to accomplish the same thing, along the lines of inline assignment in C: while (row = do_fetch()) { do_processing(row); } I've tried figuring out the syntax using list comprehensions, but I can't seem to figure it out. Any recommendations? Thanks, Erik

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• supported MySQL for Python2.6.1

  - by SKSK

  Can any one tell me which MySQL version is suitable for Python2.6.1 to connect MySQLdb, I am using MySQL4.0.23 and MySQLdb of MySQL-python-1.2.3c1.win32-py2.6 after successfully installation also its showing No module named MySQLdb and I sent the Environment Variables also properly for Python2.6, using Windows XP, tested import MySQLdb through command prompt its not showing any errors then what could be the problem, I am straggling on this since last 2days, Please tell what could be the problem

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• mysqldb interfaceError

  - by Johanna

  I have a very weird probleme with mysqldb (mysql module for python). I have a file with queries for inserting records in tables. If I call the functions from the file, it works just fine. But when I try to call one of the functions from another file it throws me a _mysql_exception.InterfaceError: (0, '') I really don't get what I'm doing wrong here.. I call the function from buildDB.py : import create create.newFormat("HD", 0,0,0) The function newFormat(..) is in create.py (imported) : from Database import Database db = Database() def newFormat(name, width=0, height=0, fps=0): format_query = "INSERT INTO Format (form_name, form_width, form_height, form_fps) VALUES ('"+name+"',"+str(width)+","+str(height)+","+str(fps)+");" db.execute(format_query) And the class Databse is the following : import MySQLdb from MySQLdb.constants import FIELD_TYPE class Database(): def __init__(self): server = "localhost" login = "seq" password = "seqmanager" database = "Sequence" my_conv = { FIELD_TYPE.LONG: int } self.conn = MySQLdb.connection(host=server, user=login, passwd=password, db=database, conv=my_conv) # self.cursor = self.conn.cursor() def close(self): self.conn.close() def execute(self, query): self.conn.query(query) (I put only relevant code) Traceback : Z:\sequenceManager\mysql>python buildDB.py D:\ProgramFiles\Python26\lib\site-packages\MySQLdb\__init__.py:34: DeprecationWa rning: the sets module is deprecated from sets import ImmutableSet INSERT INTO Format (form_name, form_width, form_height, form_fps) VALUES ('HD',0 ,0,0); Traceback (most recent call last): File "buildDB.py", line 182, in <module> create.newFormat("HD") File "Z:\sequenceManager\mysql\create.py", line 52, in newFormat db.execute(format_query) File "Z:\sequenceManager\mysql\Database.py", line 19, in execute self.conn.query(query) _mysql_exceptions.InterfaceError: (0, '') The warning has never been a problem before so I don't think it's related.

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• python mysqldb - mysql server gone away - can't reconnect

  - by david.barkhuizen

  Hi Folks, When attempting to import a bunch of data into mysql tables using python and mysqldb, I run into the following error '2006 - mySQL Server has gone away', and then I am unable to reconnect again within the script. I am iniitially re-using a connection object across transactions ( delineated by conn.commit() ), then when I first encounter this exception, if I create a new connection by calling MySQLdb.connect(), this new connection also fails with the same exception. This error does not occur immediately, I can pump a fair amount of data into the db, but then faithfully occurs after I have inserted a couple thousand records, so roughly once the db has committed a certain transaction volume, it always falls over like this. If I rerun the script, WITHOUT restarting the db server. then it resumes where it left off, pumps in some data, then falls over again. Before recommendations to change time-out timings, does anyone know why I am not able to establish a new connection after the initial failure ? - Even if I try a couple of times waiting a couple of seconds between each. (btw, I'm running Windows 7, mysql server 5.1.48, mysqldb 1.2.3.gamma.1, python 2.6)

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