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• How can I setup BluePill to Monitor a Rails App Running via Passenger (mod_rails)

  - by Jim Jeffers

  I recently launched a site running phusion passenger. Unfortunately, the site went down due to a frozen thread. I was able to save the server by doing kill -9 to the specific PID. Still though, I thought passenger was able to manage this automatically. I have a server with 1GB of memory running one rails app with passenger allotted up to 7 instances. However, when I came to discover the site went down I found that passenger had spawned 6 instances with one of them using up over 800mb of memory causing the server to swap. As a result I am hoping to setup something like bluepill on the server but I'm slightly confused as to how you go about doing it. Mainly because bluepill expects to start/stop the processes it's monitoring. However, in our case, passenger already restarts processes for us so we only need to monitor the pids of passengers instances and kill them once they've gotten too large. Has anyone here setup BluePill to monitor a rails app running under phusion's passenger? Any insight would be useful.

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• apache with php fastcgi keeps going down

  - by Josh Nankin

  I have an apache2 server configured with MPM worker and php fast cgi. Lately the apache logs have been telling me that MaxClients is being reached frequently, even though it's already pretty high. My server is now constantly going down, and I see a bunch of lines like this in the log: [Sun Mar 06 04:25:40 2011] [error] [client 50.16.83.115] FastCGI: comm with (dynamic) server "/var/local/fcgi/php-cgi-wrapper.fcgi" aborted: (first read) idle timeout (20 sec) [Sun Mar 06 04:25:40 2011] [error] [client 50.16.83.115] FastCGI: incomplete headers (0 bytes) received from server "/var/local/fcgi/php-cgi-wrapper.fcgi" I can see that my php-cgi processes are pretty large (about 70mb on average). Here's my apache configuration for MPM worker: KeepAlive ON KeepAliveTimeout 2 <IfModule mpm_worker_module> StartServers 5 MinSpareThreads 10 MaxSpareThreads 10 ThreadLimit 64 ThreadsPerChild 10 MaxClients 20 MaxRequestsPerChild 2000 </IfModule> Heres my fastcgi apache configuration: <IfModule mod_fastcgi.c> # One shared PHP-managed fastcgi for all sites Alias /fcgi /var/local/fcgi # IMPORTANT: without this we get more than one instance # of our wrapper, which itself spawns 20 PHP processes, so # that would be Bad (tm) FastCgiConfig -idle-timeout 20 -maxClassProcesses 1 <Directory /var/local/fcgi> # Use the + so we don't clobber other options that # may be needed. You might want FollowSymLinks here Options +ExecCGI </Directory> AddType application/x-httpd-php5 .php AddHandler fastcgi-script .fcgi Action application/x-httpd-php5 /fcgi/php-cgi-wrapper.fcgi </IfModule> Here's my fastcgi wrapper: #!/bin/sh PHPRC="/etc/php5/apache2" export PHPRC PHP_FCGI_CHILDREN=8 export PHP_FCGI_CHILDREN exec /usr/bin/php-cgi Any help would be very very much appreciated!

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• limits.conf to set memory limits

  - by Rupert Jipe

  I would like to limit any process from using more than 500 MB of RAM. AFAIK this is done using RSS in /etc/security/limits.conf but the process called gnome-panel apparently is using 618436 kB of VmRSS. How can this be ? /etc/security/limits.conf * hard rss 512000 username@debian:~$ cat /proc/3002/status Name: gnome-panel State: S (sleeping) Tgid: 3002 Pid: 3002 PPid: 2910 TracerPid: 0 Uid: 1000 1000 1000 1000 Gid: 1000 1000 1000 1000 FDSize: 64 Groups: 20 24 25 29 44 46 112 116 117 1000 1002 1003 VmPeak: 916636 kB VmSize: 916636 kB VmLck: 0 kB VmHWM: 618436 kB VmRSS: 618436 kB VmData: 601972 kB VmStk: 104 kB VmExe: 516 kB VmLib: 29232 kB VmPTE: 1760 kB Threads: 1 SigQ: 0/14001 SigPnd: 0000000000000000 ShdPnd: 0000000000000000 SigBlk: 0000000000000000 SigIgn: 0000000020001000 SigCgt: 0000000180000000 CapInh: 0000000000000000 CapPrm: 0000000000000000 CapEff: 0000000000000000 CapBnd: ffffffffffffffff Cpus_allowed: 3 Cpus_allowed_list: 0-1 Mems_allowed: 00000000,00000001 Mems_allowed_list: 0 voluntary_ctxt_switches: 871965 nonvoluntary_ctxt_switches: 47553 PaX: PeMRs username@debian:~$ cat /proc/3002/limits Limit Soft Limit Hard Limit Units Max cpu time unlimited unlimited seconds Max file size unlimited unlimited bytes Max data size unlimited unlimited bytes Max stack size 8388608 unlimited bytes Max core file size 0 0 bytes Max resident set 524288000 524288000 bytes Max processes 100 100 processes Max open files 1024 1024 files Max locked memory 65536 65536 bytes Max address space unlimited unlimited bytes Max file locks unlimited unlimited locks Max pending signals 14001 14001 signals Max msgqueue size 819200 819200 bytes Max nice priority 0 0 Max realtime priority 0 0 Max realtime timeout unlimited unlimited us

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• Authenticated User Impersonation in Classic ASP under IIS7

  - by user52663

  I've recently moved one of our servers from Server 2003 and IIS6 to Server 2008 R2 and IIS7 (technically IIS7.5 I suppose). In doing so I am transitioning a small account management tool written in classic ASP and have run into a problem with user impersonation. Extensive searching hasn't been much help so far. Under IIS6, the site was configured to impersonate the logged-in user. Thus, if a domain admin logged in, he was able to run commands to create user directories, adjust permissions, etc. Using Procmon you can see the processes executing as that user. This worked fine. However, with the same code under IIS7, I am unable to get this behavior. I have enabled Basic Authentication, disabled Anonymous Auth, enabled impersonation and have changed the app pool to classic instead of integrated pipelining. Everything seems to be configured correctly, however, all the processes launched by the classic ASP site continue to run as the default AppPool identity and not the logged-in user. If it matters, programs are being launched with code such as: set Wsh = Server.CreateObject("WScript.Shell") Wsh.Run("cmd.exe /C mkdir D:\users\foo") Monitoring via Procmon shows cmd.exe being run as either "Classic .NET AppPool" or "DefaultAppPool" depending on the pipeline mode. Any suggestions on how to get the classic ASP site to impersonate and execute as the authenticated user would be great. Thanks!

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• Webmin ADSL module

  - by expatcm

  I was wondering if the Webmin ADSL module is going to help me solve a problem .... but I cannot find any documentation telling me what the module does ..... Any ideas? What I am hoping is that it will solve a problem .... I am just in the process of setting up a Debian server. I will use the DHCP server as part of the Debian setup to manage the lan IP addresses. I want to turn off the external DHCP server which is part of the Linksys ADSL modem / router and use just the modem. The challenge I have is knowing what I need to do in order to get the public DNS on the eth1. When I turn off the DHCP on the modem / router not a lot happens apart from no longer being able to access the settings .......... So I am looking at this Webmin module and wondering if it is to manage the ADSL connection and find the public DNS address .... The local DHCP server is working well for the lan, I am just stuck for the external DNS.

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• I accidentally hijacked my localhost

  - by Zach L

  Opening localhost in the browser is pointing a local webpage (examplePage) after playing with some config files a while back, and I can't figure out how to restore the default behavior. Background: I have XAMPP installed on my Windows 7 machine, and a webpage at c:/xampp/htdocs/examplePage. A couple weeks ago, I was on a mission to get sites root-relative urls (/resource) to work, so I played around with a bunch of apache/conf files, including httpd.conf and httpd-vhosts.conf and also was messing with the Windows hosts file. I gave up at some point, didn't document exactly what I did, and have since probably forgotten some of what I did. Many of my changes stemmed from suggestions in this StackOverflow post What I've Tried I commented out my additions to the hosts file I turned off XAMPP (thus hopefully negating any apache config file effect) I reverted to my original DocumentRoot in httpd.conf anyway (xampp/htdocs) localhost still displays examplePage. Even with xampp turned on (my reverted DocmentRootisn't taking effect) Does anyone know what I may have done and how I can fix it? Update : Its been resolved, thank everyone so much in taskmanager, theres a couple instances of httpd.exe (Apache HTTP Server). I ended these, and opened XAMPP, restarting apache. all references to examplePage in my .conf files that I could find had been commented out or removed. I imagine that the old versions were still in effect for some reason, and manually ending the Apache processes fixed this. As a point of interest, Its still a mystery why those processes were running - I cannot reproduce that situation. I must've stumbled upon a XAMPP bug of some sort.

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• Ubuntu lucid, maverick high iowait

  - by netom

  I'm using Ubuntu, and I've got the same problem with Lucid and Maverick. From time to time, especially a few minutes after boot, the iowait goes between 50-100% and the box is unusable. Everything that tries to access the disk freezes. I have the following setup: Hard disk: Model Family: Western Digital Caviar Green family Device Model: WDC WD15EADS-00P8B0 Serial Number: WD-WMAVU0391287 Firmware Version: 01.00A01 User Capacity: 1.500.301.910.016 bytes I have a quad core Intel Core2 Q6600 processor, and 4G of memory. When the high iowait occurs, usually 4 processes are active: kdmflush (two procs) jbd2/dm-0-8 jbd2/db-1-8 and a few more starving user processes of course. I know this from top and iotop. Any suggestions about why this is happening? There are a lot of q/a-s about linux and high iowait, but none of them helped so far, I even tweaked the hard disk not to park the head in every 8 seconds (Load cycle count is 50334!!!!! :o ), but nothing. Problem persists. Thank you in advance.

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• Incorrect directory permissions with OpenSSH on Cygwin on Windows Server 2008 SP2

  - by Davy Brion

  I ran into a weird directory permission problem when logged in to a Win2008SP2 (not R2) server through SSH. When I open a local cygwin shell on the server, i can do this: myUser@myServer ~ $ cd /cygdrive/c/Windows/System32/inetsrv/ myUser@myServer /cygdrive/c/Windows/System32/inetsrv $ cd config myUser@myServer /cygdrive/c/Windows/System32/inetsrv/config $ I have no issues accessing the 'config' directory when using a local cygwin shell. 'myUser' has all necessary permissions to access the directory as well. In fact, 'myUser' is a local administrator on the machine. Listing the permissions of the config folder through the local cygwin shell shows the following output: 4 drwx------+ 1 SYSTEM SYSTEM 0 Aug 2 09:38 config But when I log into the server with a SSH client (in this case Putty), i run into the following problem: myUser@myServer ~ $ cd /cygdrive/c/Windows/System32/inetsrv/ myUser@myServer /cygdrive/c/Windows/System32/inetsrv $ cd config -bash: cd: config: Permission denied It also doesn't list the proper permissions through SSH: 0 drwxr-x--- 1 ???????? ???????? 0 Aug 2 09:38 config When I look at the running processes on the server with Task Manager (with a remote desktop connection), it shows that all bash.exe processes are running under the 'myUser' account, so I don't understand why I can't access that particular directory through SSH but have no problems accessing it in a local cygwin shell. I'm using OpenSSH 5.9p1-1. I'm not sure what the Cygwin version is... I used the latest setup.exe (version 2.738) of Cygwin, but I can't seem the find any other Cygwin-related version number. I doubt that it's related to SSH/Cygwin though, because when I connect from the Win2008SP2 server to my local Win7 machine through SSH (using the same OpenSSH/Cygwin versions) I can access the /cygdrive/c/Windows/System32/inetsrv/config folder without issues. Does anyone have an idea on what the issue could be?

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• Apache MaxClients doubt

  - by Milan Babuškov

  I have a busy Apache server serving only dynamic PHP+MySQL pages. It is a prefork Apache, version 2.2.4 with following config: KeepAlive off StartServers 8 MinSpareServers 32 MaxSpareServers 64 ServerLimit 512 MaxClients 512 MaxRequestsPerChild 4000 MaxClients/ServerLimit used to be set to 256, but I got the following error in error_log so I increased it: [error] server reached MaxClients setting, consider raising the MaxClients setting It seems to work now, but I have a doubt. Looking at MySQL log of queries, I have a couple hundred clients per seconds, but "ps ax" only shows 8, 9 or 10 processes running: [root@engine ~]# ps ax | grep http | wc -l 10 I even got this many processes when the above error message was shown in error_log. This made me investigate further. When I run netstat -a, I get something like this: tcp 0 0 engine:http adsl-105-143.teol.net:21453 TIME_WAIT tcp 0 0 engine:http 118-36.static.kds:mck-ivpip TIME_WAIT tcp 0 0 engine:http 118-36.static:oce-snmp-trap TIME_WAIT tcp 0 0 engine:http 118-36.static.kd:unifyadmin TIME_WAIT tcp 0 0 engine:http cable-188-2-25-29.dyna:4906 TIME_WAIT tcp 0 0 engine:http adsl-105-143.teol.net:21458 TIME_WAIT tcp 0 0 engine:http 109-92-83-91.dynamic.:62821 TIME_WAIT tcp 0 0 engine:http cable-89-216-142-192.:63576 TIME_WAIT tcp 0 0 engine:http 109-92-83-91.dynamic.:62819 TIME_WAIT tcp 1081 0 engine:http pttnetadsl38-36.ptt.r:50496 ESTABLISHED tcp 0 0 engine:http cable-188-2-36-196.dyn:4136 TIME_WAIT tcp 0 0 engine:http cable-89-216-142-192.:63580 TIME_WAIT tcp 0 0 engine:http cable-89-216-142-192.:63581 TIME_WAIT etc. When counting those, I get: [root@engine ~]# netstat -a | grep http | wc -l 431 Can anyone tell me what is really going on here and how to make sure my server keeps working, because I only use 50% of available RAM in machine?

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• Why is SMF manifest losing configuration data when exported on SmartOS?

  - by Scott Lowe

  I'm running a server process under SMF (Server Management Facility) on Joyent's Base64 1.8.1 SmartOS image. For those not aqauinted with SmartOS, it is a cloud-based distribution of IllumOS with KVM. But essentially it is like Solaris and inherits from OpenSolaris. So even if you've not used SmartOS, I'm hoping to tap into some Solaris knowledge on ServerFault. My issue is that I want an unprivileged user to be allowed to restart a service that they own. I have worked out how to do that by using RBAC and adding an authorisation to /etc/security/auth_attr and associating that authorisation with my user. I then added the following to my SMF manifest for the service: <property_group name='general' type='framework'> <!-- Allow to be restarted--> <propval name='action_authorization' type='astring' value='solaris.smf.manage.my-server-process' /> <!-- Allow to be started and stopped --> <propval name='value_authorization' type='astring' value='solaris.smf.manage.my-server-process' /> </property_group> And this works well when imported. My unprivileged user is allowed to restart, start and stop its own server process (this is for automated code deployments). However, if I export the SMF manifest, this configuration data is gone... all I see in that section is this: <property_group name='general' type='framework'> <property name='action_authorization' type='astring'/> <property name='value_authorization' type='astring'/> </property_group> Does anybody know why this is happening? Is my syntax wrong, or am I simply not using SMF incorrectly?

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• Either, nginx+php-fpm bad config or nginx+php-fpm cannot handle high query?

  - by The Wolf

  I have wordpress installed in my server configured(hopefully with nginx+php-fpm+mariaDB). I am trying to import using wordpress importer a 1.5MB xml file. Everytime I try to upload it using the importer, it got cut of... meaning just blank screen result.. Here is my error log: actually I just posted 2 of the errors [error] 858#0: *1 connect() failed (111: Connection refused) while connecting to upstream, client: xx.xxx.xx.xx, server: xxx.com, request: "GET xxxx.html HTTP/1.1", upstream: "fastcgi://127.0.0.1:9000", host: "xxx.com" [error] 858#0: *13 connect() failed (111: Connection refused) while connecting to upstream, client: xxx.x.xx.xx, server: xxx.com, request: "GET xxxx.php HTTP/1.1", upstream: "fastcgi://127.0.0.1:9000", host: "xxx.com" I don't know what is the reason why it can't process the wordpress export .xml. I already increased max_file_upload & etc., but nothing happens. Hope somebody can help me. Here are my conf: nginx.conf user nginx; worker_processes 8; error_log /var/log/nginx/error.log warn; pid /var/run/nginx.pid; events { worker_connections 1024; } http { include /etc/nginx/mime.types; default_type application/octet-stream; log_format main '$remote_addr - $remote_user [$time_local] "$request" ' '$status $body_bytes_sent "$http_referer" ' '"$http_user_agent" "$http_x_forwarded_for"'; access_log /var/log/nginx/access.log main; sendfile on; #tcp_nopush on; server_tokens off; keepalive_timeout 65; fastcgi_read_timeout 500; #gzip on; client_max_body_size 2M; php-fpm.conf ;;;;;;;;;;;;;;;;;;;;; ; FPM Configuration ; ;;;;;;;;;;;;;;;;;;;;; ; All relative paths in this configuration file are relative to PHP's install ; prefix. ; Include one or more files. If glob(3) exists, it is used to include a bunch of ; files from a glob(3) pattern. This directive can be used everywhere in the ; file. include=/etc/php-fpm.d/*.conf ;;;;;;;;;;;;;;;;;; ; Global Options ; ;;;;;;;;;;;;;;;;;; [global] ; Pid file ; Default Value: none pid = /var/run/php-fpm/php-fpm.pid ; Error log file ; Default Value: /var/log/php-fpm.log error_log = /var/log/php-fpm/error.log ; Log level ; Possible Values: alert, error, warning, notice, debug ; Default Value: notice ;log_level = notice ; If this number of child processes exit with SIGSEGV or SIGBUS within the time ; interval set by emergency_restart_interval then FPM will restart. A value ; of '0' means 'Off'. ; Default Value: 0 ;emergency_restart_threshold = 0 ; Interval of time used by emergency_restart_interval to determine when ; a graceful restart will be initiated. This can be useful to work around ; accidental corruptions in an accelerator's shared memory. ; Available Units: s(econds), m(inutes), h(ours), or d(ays) ; Default Unit: seconds ; Default Value: 0 ;emergency_restart_interval = 0 ; Time limit for child processes to wait for a reaction on signals from master. ; Available units: s(econds), m(inutes), h(ours), or d(ays) ; Default Unit: seconds ; Default Value: 0 ;process_control_timeout = 0 ; Send FPM to background. Set to 'no' to keep FPM in foreground for debugging. ; Default Value: yes daemonize = no ;;;;;;;;;;;;;;;;;;;; ; Pool Definitions ; ;;;;;;;;;;;;;;;;;;;; ; See /etc/php-fpm.d/*.conf [root@host etc]# vim php-fpm.conf [root@host etc]# vim php-fpm.conf ; Default Value: notice ;log_level = notice ; If this number of child processes exit with SIGSEGV or SIGBUS within the time ; interval set by emergency_restart_interval then FPM will restart. A value ; of '0' means 'Off'. ; Default Value: 0 ;emergency_restart_threshold = 0 ; Interval of time used by emergency_restart_interval to determine when ; a graceful restart will be initiated. This can be useful to work around ; accidental corruptions in an accelerator's shared memory. ; Available Units: s(econds), m(inutes), h(ours), or d(ays) ; Default Unit: seconds ; Default Value: 0 ;emergency_restart_interval = 0 ; Time limit for child processes to wait for a reaction on signals from master. ; Available units: s(econds), m(inutes), h(ours), or d(ays) ; Default Unit: seconds ; Default Value: 0 ;process_control_timeout = 0 ; Send FPM to background. Set to 'no' to keep FPM in foreground for debugging. ; Default Value: yes daemonize = no ;;;;;;;;;;;;;;;;;;;; ; Pool Definitions ; ;;;;;;;;;;;;;;;;;;;; ; See /etc/php-fpm.d/*.conf ps aux [root@host etc]# ps aux USER PID %CPU %MEM VSZ RSS TTY STAT START TIME COMMAND root 1 0.0 0.1 2900 1380 ? Ss Jun02 0:00 init root 2 0.0 0.0 0 0 ? S Jun02 0:00 [kthreadd/9308] root 3 0.0 0.0 0 0 ? S Jun02 0:00 [khelper/9308] root 124 0.0 0.0 2464 576 ? S<s Jun02 0:00 /sbin/udevd -d root 460 0.0 0.1 35976 1308 ? Sl Jun02 0:00 /sbin/rsyslogd -i /var/run/syslogd.pid -c 5 root 474 0.0 0.0 8940 1028 ? Ss Jun02 0:00 /usr/sbin/sshd root 481 0.0 0.0 3264 876 ? Ss Jun02 0:00 xinetd -stayalive -pidfile /var/run/xinetd.pid root 491 0.0 0.1 6268 1432 ? S Jun02 0:00 /bin/sh /usr/bin/mysqld_safe --datadir=/var/lib/mysql --pid-file=/var/lib/mysql/host.busilak.com. mysql 584 0.1 6.8 679072 71456 ? Sl Jun02 0:04 /usr/sbin/mysqld --basedir=/usr --datadir=/var/lib/mysql --plugin-dir=/usr/lib/mysql/plugin --use root 586 0.0 0.3 12008 3820 ? Ss Jun02 0:01 sshd: root@pts/0 root 629 0.0 0.0 9140 756 ? Ss Jun02 0:00 /usr/sbin/saslauthd -m /var/run/saslauthd -a pam -n 2 root 630 0.0 0.0 9140 520 ? S Jun02 0:00 /usr/sbin/saslauthd -m /var/run/saslauthd -a pam -n 2 root 645 0.0 0.1 12788 1928 ? Ss Jun02 0:01 sendmail: accepting connections smmsp 653 0.0 0.1 12576 1728 ? Ss Jun02 0:00 sendmail: Queue runner@01:00:00 for /var/spool/clientmqueue root 691 0.0 0.1 7148 1184 ? Ss Jun02 0:00 crond root 698 0.0 0.1 6272 1688 pts/0 Ss Jun02 0:00 -bash root 1006 0.0 0.0 7828 924 ? Ss 00:30 0:00 nginx: master process /usr/sbin/nginx -c /etc/nginx/nginx.conf nginx 1007 0.0 0.1 8156 1724 ? S 00:30 0:00 nginx: worker process nginx 1008 0.0 0.1 8024 1360 ? S 00:30 0:00 nginx: worker process nginx 1009 0.0 0.1 8020 1356 ? S 00:30 0:00 nginx: worker process nginx 1011 0.0 0.1 8024 1360 ? S 00:30 0:00 nginx: worker process nginx 1012 0.0 0.1 8024 1360 ? S 00:30 0:00 nginx: worker process nginx 1013 0.0 0.1 8024 1360 ? S 00:30 0:00 nginx: worker process nginx 1014 0.0 0.1 8024 1360 ? S 00:30 0:00 nginx: worker process nginx 1015 0.0 0.1 8024 1344 ? S 00:30 0:00 nginx: worker process root 1030 0.0 0.2 25396 2904 ? Ss 00:30 0:00 php-fpm: master process (/etc/php-fpm.conf) apache 1031 0.0 1.9 40700 20624 ? S 00:30 0:00 php-fpm: pool www apache 1032 0.0 2.0 41924 21888 ? S 00:30 0:01 php-fpm: pool www apache 1033 0.0 1.9 41212 20848 ? S 00:30 0:01 php-fpm: pool www apache 1034 0.0 1.9 40956 20792 ? S 00:30 0:01 php-fpm: pool www apache 1035 0.0 2.0 41560 21556 ? S 00:30 0:02 php-fpm: pool www apache 1040 0.0 1.8 39292 19120 ? S 00:30 0:00 php-fpm: pool www root 1125 0.0 0.0 6080 1040 pts/0 R+ 01:04 0:00 ps aux netstat -l [root@host etc]# netstat -l Active Internet connections (only servers) Proto Recv-Q Send-Q Local Address Foreign Address State tcp 0 0 *:ssh *:* LISTEN tcp 0 0 localhost.localdomain:smtp *:* LISTEN tcp 0 0 localhost.locald:cslistener *:* LISTEN tcp 0 0 *:mysql *:* LISTEN tcp 0 0 *:http *:* LISTEN tcp 0 0 *:ssh *:* LISTEN Active UNIX domain sockets (only servers) Proto RefCnt Flags Type State I-Node Path unix 2 [ ACC ] STREAM LISTENING 60575947 /var/run/saslauthd/mux unix 2 [ ACC ] STREAM LISTENING 60574168 @/com/ubuntu/upstart unix 2 [ ACC ] STREAM LISTENING 60575873 /var/lib/mysql/mysql.sock Hope somebody can help me to figure out what is the problem.

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• Simultanious process mysteriously ending

  - by Matt

  I'm trying to run a large air quality model, written in FORTRAN, setup with bash scripts, and run in a work queue (slurm.) The first part of the modeling is to run an "entry" model, this runs with MPI in the work queue but only on one process. At one point in the logs, there's a mysterious FORTRAN STOP, and then later the model fails because something wasn't set up properly. This FORTRAN STOP isn't from the main process, which continues running. This is a huge model, but as far as I know there should not be any other processes running at the same time. It consistently fails at the exact same spot. (I can move it by adding debug, but the debug is in the main process) How can I determine what this process is? I've tried added a call to strace -feprocess $SHELL in the run script, but I'm new to this, so if it has offered any info, I haven't been able to use it yet. The is no trace output around the FORTRAN STOP. The whole process occurs so fast that I can't seem to observe it by using ps. Is there a way I can somehow monitor all the processes being initiated from the time the work queue starts? Or some other way I can figure out what is failing? This is running on CentOS 6.4, with Slurm, compiled with PGI 13.

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• Cable management techniques

  - by cornjuliox

  How do you manage the giant jungle of cables behind your PC? When you have 2 or more PCs next to each other, you wind up with this giant mess cables that's a pain in the neck to clean especially when both computers are running 24/7 and any fidgeting with the cables is likely to cause data loss and/or angry users. So far I've tried masking tape, cable ties and plain old string but none have been very effective. The masking tape kept the cables in place, but over time they ended up leaving this awful sticky residue on the sides of the cables that just won't come off gets all over your fingers and is horrible horrible horrible. I have nightmares about that stuff. We used cable ties and 'folded' up some of the longer cables so that they weren't any longer than they needed to be, but this meant that the position of some of our devices like the keyboard and the mouse were essentially 'fixed' until we removed the ties. The string didn't work much differently and required that we tie them properly or risk it coming loose. I would switch to a wireless keyboard and mouse, but I don't want to have to deal with the added expense of batteries, even the rechargable ones. Plus I don't want them to die on me at a crucial moment (happened to me once while playing Firearms _<). How do large offices and data centers manage their masses of cable?

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• placing shell script under systemd control

  - by Calvin Cheng

  Assuming I have a shell script like this:- #!/bin/sh # cherrypy_server.sh PROCESSES=10 THREADS=1 # threads per process BASE_PORT=3035 # the first port used # you need to make the PIDFILE dir and insure it has the right permissions PIDFILE="/var/run/cherrypy/myproject.pid" WORKDIR=`dirname "$0"` cd "$WORKDIR" cp_start_proc() { N=$1 P=$(( $BASE_PORT + $N - 1 )) ./manage.py runcpserver daemonize=1 port=$P pidfile="$PIDFILE-$N" threads=$THREADS request_queue_size=0 verbose=0 } cp_start() { for N in `seq 1 $PROCESSES`; do cp_start_proc $N done } cp_stop_proc() { N=$1 #[ -f "$PIDFILE-$N" ] && kill `cat "$PIDFILE-$N"` [ -f "$PIDFILE-$N" ] && ./manage.py runcpserver pidfile="$PIDFILE-$N" stop rm -f "$PIDFILE-$N" } cp_stop() { for N in `seq 1 $PROCESSES`; do cp_stop_proc $N done } cp_restart_proc() { N=$1 cp_stop_proc $N #sleep 1 cp_start_proc $N } cp_restart() { for N in `seq 1 $PROCESSES`; do cp_restart_proc $N done } case "$1" in "start") cp_start ;; "stop") cp_stop ;; "restart") cp_restart ;; *) "$@" ;; esac From the bash script, we can essentially do 3 things: start the cherrypy server by calling ./cherrypy_server.sh start stop the cherrypy server by calling ./cherrypy_server.sh stop restart the cherrypy server by calling ./cherrypy_server.sh restart How would I place this shell script under systemd's control as a cherrypy.service file (with the obvious goal of having systemd start up the cherrypy server when a machine has been rebooted)? Reference systemd service file example here - https://wiki.archlinux.org/index.php/Systemd#Using_service_file

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• Shared files folder in Amazon Elastic Beanstalk environment

  - by por

  I'm working on a Drupal application, which is planned to be hosted in Amazon Elastic Beanstalk environment. Basically, Elastic Beanstalk enables the application to scale automatically by starting additional web server instances based on predefined rules. The shared database is running on an Amazon RDS instance, which all instances can access properly. The problem is the shared files folder (sites/default/files). We're using git as SCM, and with it we're able to deploy new versions by executing $ git aws.push. In the background Elastic Beanstalk automatically deletes ($ rm -rf) the current codebase from all servers running in the environment, and deploys the new version. The plan was to use S3 (s3fs) for shared files in the staging environment, and NFS in the production environment. We've managed to set up the environment to the extent where the shared files folder is mounted after a reboot properly. But... The Problem is that, in this setup, the deployment of new versions on running instances fail because $ rm -rf can't remove the mounted directory, and as result, the entire environment goes down and we need restart the environment, which isn't really an elegant solution. Question #1 is that what would be the proper way to manage shared files in this kind of deployment? Are you running such an environment? How did you solve the problem? By looking at Elastic Beanstalk Hostmanager code (Ruby) there seems be a way to hook our functionality (unmount if mounted in pre-deploy and mount in post-deploy) into Hostmanager (/opt/hostmanager/srv/lib/elasticbeanstalk/hostmanager/applications/phpapplication.rb) but the scripts defined in the file (i.e. /tmp/php_post_deploy_app.sh) don't seem to be working. That might be because our Ruby skills are non-existent. Question #2 is that did you manage to hook your functionality in Hostmanager in a portable way (i.e. by not changing the core Hostmanager files)?

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• Windows Key is shutting my PC with Windows 7 down when pressed

  - by jasondavis

  I am having a really annoying problem lately with my Windows 7 PC. The problem, is all of a sudden, just within the last day or 2, anytime I hit the WIN (Windows keyboard key) instead of popping up the start menu, the system shuts down all my programs and trys to shut down, the only reason it doesn't suceed is because one of the programs I will have running will have an un-saved document, so it will ask me if I want to save the document before shutting down, I then can hit cancel and it halts the process. I do not remember installing anything and programs from from around the time it started doing this, maybe 2-3 days ago. I have gone through and searched Google for every Process running in the taskmanager to see which processes were REQUIRED for Windows to run, I then closed eveything down and killed all the non-essential Processes and the result was this... The reason you see notepad.exe is because I had it open with an unsaved document to keep the system from shutting down, I then tried hitting the win key after I shut each process down, after everything was shut to just show the above, it still tries to shut my system down, this is driving me insane, please help I am at a lost. I am about to see if I can try a different keyboard just encase it is some malfunction on the keyboard. The reason I need to access the WIN key or would like to is because I have Win + v set up to work with a special clipboard manager I believe it is called ClipX

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• Send Apache Access Logs to syslog

  - by Seer

  We have IBM HTTP Servers (Based on Apache 2.0) and want to send the access logs to syslog. (in addition to error logs which does work) The config we are using is as follows: ErrorLog "|/HTTPServer/bin/rotatelogs /archive/http/error_log.%Y%m%d 86400 | /usr/bin/logger -t httpd -plocal6.err" LogLevel warn LogFormat "%h %{True-Client-IP}i %l %u %t \"%r\" %>s %b \"%{Referer}i\" \"%{User-Agent}i\" %D \"%{Host}i\" %v" combined LogFormat "%h %l %u %t \"%r\" %>s %b" common LogFormat "%{Referer}i -> %U" referer LogFormat "%{User-agent}i" agent CustomLog "|exec /usr/bin/logger -t ptseelm-ax3004 -i -p local6.notice" combined But the logs entries don't even appear in the local syslog.out here is what the processes look like: ps -ef | grep httpd apache 6226000 8388618 0 09:04:01 - 0:00 /HTTPServer/bin/httpd -d /HTTPServer -k start apache 6750220 8388618 0 09:04:01 - 0:00 /HTTPServer/bin/httpd -d /HTTPServer -k start apache 7602390 8388618 0 09:04:01 - 0:00 /HTTPServer/bin/httpd -d /HTTPServer -k start root 8388618 1 0 09:04:01 - 0:00 /HTTPServer/bin/httpd -d /HTTPServer -k start root 9044038 8388618 0 09:04:01 - 0:00 /usr/bin/logger -t httpd -plocal6.err So there is no logger attached to the child processes... is that the problem? Can someone help me out? :) We have the following in syslog.conf: local6.* @somerealipaddress

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• Getting rsync to move file from source to destination ?

  - by fabien-barbier

  Is rsync is a good choice for my project ? I have to : - copy files from source to destination folder via SSH, - be sure all files are copied, - delete source files after copy. - if I have conflict name, I have to rename files. It looks like I can use option : --remove-source-files (to delete source files) But how rsync manage conflict, can I had rules ? Use case on my project : I run scientific calculation on server A and results are inserted in folder "process", for each calculation I have a repository like this : /process/calc1. Now I would like to transfer repository "/calc1" to server B (I get /process/calc1), and delete "calc1" from server A. ...During another calculation I get "/process/calc2" on server A, the idea is also to move "calc2" in "/process/" directory on server B, then I have now on server B : - /process/calc1 - /process/calc2 (and /process/ on server A is empty). How rsync will manage conflict (on server B) if I have another folder like "/process/calc1" in server A after a new calculation (if "/process/calc1" already exist on server B) ? Is it possible to add rules with rsync, and rename "/process/calc1" by "process/calc1R2" in server B ? And so on (ex:calc1R3) ? Thanks.

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• Windows, why 8 GB of RAM feel like a few MB?

  - by Desmond Hume

  I'm on Windows 7 x64 with 4-core Intel i7 and 8 GB of RAM, but lately it feels like my computer's "RAM" is located solely on the hard drive. Here is what the task manager shows: The total amount of memory used by the processes in the list is just about 1 GB. And what is happening on my computer for a few days now is that one program (Cataloger.exe) is continually processing large quantities of (rather big) files, repeatedly opening and reading them for the purposes of cataloging. But it doesn't grow too much in memory and stays about that size, about 90 MB. However, the amount of data it processes in, say, 30 minutes can be measured in gigabytes. So my guess was that Windows file caching has something to do with it. And after some research on the topic, I came across this program, called RamMap, that displays detailed info on a computer's RAM. Here is the screenshot: So to me it looks like Windows keeps in RAM huge amounts of data that is no longer needed, redirecting any RAM allocation requests to the pagefile on the hard drive. Even when I close Cataloger.exe, the RamMap reports the size of the mapped file as about the same for a long time on. And it's not just this particular program. Earlier I noticed that similar slowdown occurred after some massive file operations with other programs. So it's really not an exception. Whatever it is, it slows down the computer by like 50 times. Opening a new tab in Chrome takes 20-30 seconds, opening a new program can take up to a minute. Due to the slowdown, some programs even crash. So what do you think, is the problem hiding in file caching or somewhere else? How do I solve it?

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• Intermittent NFS lockups on Isilon cluster

  - by blackbox222

  We have an Isilon cluster with 8 IQ 12000x nodes which exports storage via several NFS shares for a handful of Linux and Solaris clients. There is a Linux system that has one of these NFS filesystems mounted. I/O to this filesystem is moderately heavy from the Linux system. Every 3-4 weeks (it's not on any kind of discernible schedule, and sometimes is more/less frequent than this), we notice that all activity ceases on this NFS mount (the process hangs, as if the network stopped working so process is stuck in uninterruptible sleep) - 30 minutes later, the share recovers and things continue to work normally. The kernel log from the affected machine is as follows: Dec 3 10:07:29 redacted kernel: [8710020.871993] nfs: server nfs-redacted not responding, still trying Dec 3 10:37:17 redacted kernel: [8711805.966130] nfs: server nfs-redacted OK relevant /etc/fstab line: nfs-redacted:/ifs/nfs/export_data/shared/...redacted... /data nfs defaults 0 0 I've checked to see if there are any scheduled processes e.g. cron jobs, Isilon related functions e.g. snapshots, etc that might be causing these hangups but I can't seem to find anything. I'm also not aware of any network related issues or maintenance that would cause this. All of the lockups last almost exactly 30 minutes per the kernel logs. Perhaps someone has some suggestions I could try? (I considered a soft mount to avoid the problems associated with processes accessing the filesystem hanging; however am wary of the corruption that could result and it would not really solve the underlying issue anyway).

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• a VPS mail server

  - by microspino

  Hello I'm trying to substitute citadel on my Virtual Private Server with something more simple. I dislike their documentation and the webmail client. I don't need any groupware feature. I need only an MTA with a nice looking web interface, SPAM and VIRUS check. I recently found the lamson project from Zed Shaw. Is that production ready? Do you had any real and good experience with It? On the latest-news page I see that the last release dates december 2009. Sorry for my lack of knowledge, I'm really new to mail servers but I have to find a solution to manage sending and receiving mail on my VPS. I would accept also to build my VPS email server using a linux system like exim, postfix or whatever but I have really small needs and they will not grow in at least a year and i will be the only one user. I'm searching for something that I could build and manage easily, as I'm a novice linux sysadmin. Having also some good documentation or at least a robust step by step guide would be a plus.

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• 502 Bad Gateway error after failed requests using Passenger

  - by Nicolas Buduroi

  I've got a staging server running nginx 1.0.5 using Rails 3.1 under Passenger 3.0.9. The problem is that a request sent just after one where there's an application error return 502 Bad Gateway. To test it I've set up a simple controller with an action that just raise a dummy exception. One request will show the Rails error message and the next one will show nginx 502 Bad Gateway error, then it goes back to the Rails application error, etc. While investigating this problem I've found out that load testing the application (which increase the number of application processes) make that issue disapear. That is until the extra processes are shutdown, then it reappear. I've tried setting the passenger_min_instances option, but doing so doesn't change anything and in this case each time an application error happen one instance is killed while after load testing all instances are kept alive. P.S.: Some people on my team told me that they've seen the 502 error even when there's no application error but I've not been able to reproduce that. Update: Just found out how to display the responses status codes using ab and most of them are 502!

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• Windows memory logged on vs logged off

  - by Adi

  Let's say I power on my fresh installed Windows 7 x64 machine. After Windows boots up, there are a bunch of services being started in the background that start allocating memory. Then I enter my user/pass and Windows logs me in. Let's supose I don't do anythig else (I don't explicitely start any application) and I don't have any other app installed by me. So it's fresh install of my machine. My question is: how much memory is needed for all the UI & other stuff? Is it a good indicator to look into task manager and check all the processes started under my user name and sum up all the memory consumed by those processes to get the total amount of memory I am consuming just to stay logged on? Basically this is my question: how much memory is needed just to stay logged on? Now, if log off would all the memory be released back to the system so that the background services can benefit of? Also, I assume that there might be a different discussion for each Windows flavors (?)

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• How to find process that's using 100% of CPU

  - by Gabriel

  As i'm looking at htop and top i see that my processor usage is 100% allways. But i can not see any process that is using that much CPU. Htop shows me only 1-2 processes that use around 5% cpu time. Is there a way to find the processes that use that much cpu time? Here is the output of ps -eo pcpu,pid,user,args | sort -r -k1 | less %CPU PID USER COMMAND 0.8 20413 root jsvc.exec -user tomcat -cp ./bootstrap.jar -Djava.endorsed.dirs=../common/endorsed -outfile ../logs/catalina.out -errfile ../logs/catalina.err -verbose org.apache.catalina.startup.Bootstrap -security 0.3 631 mysql /usr/sbin/mysqld --basedir=/ --datadir=/var/lib/mysql --user=mysql --pid-file=/var/lib/mysql/mysql.pid --skip-external-locking 0.2 3380 root /usr/local/apache/bin/httpd -k restart -DSSL 0.2 24698 root tailwatchd 0.2 22472 root /usr/local/jdk/bin/java -Djava.util.logging.config.file=/usr/local/jakarta/tomcat/conf/logging.properties -Dfile.encoding=UTF8 -XX:MaxPermSize=128m -Djava.util.logging.manager=org.apache.juli.ClassLoaderLogManager -Djava.endorsed.dirs=/usr/local/jakarta/tomcat/common/endorsed -classpath /usr/local/jakarta/tomcat/bin/bootstrap.jar -Dcatalina.base=/usr/local/jakarta/tomcat -Dcatalina.home=/usr/local/jakarta/tomcat -Djava.io.tmpdir=/usr/local/jakarta/tomcat/temp org.apache.catalina.startup.Bootstrap start 0.1 32095 root cpanellogd - processing bandwidth 0.0 9733 root sleep 1m

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• Good references to know why has my computers stopped responding me

  - by Peterstone

  Hello all! I´m a windows xp user (but not for much time...) and I usually see how my computer stop of responding me. The process is this: Firsly it became totally stopped or very slow for certain periods of 5 minutes. How could I do? After that it gets stopped (Even not totally because If I click on the bar I see a blinking response in the bar botton of the program I click on. It´s could be anything related with security (like the firewall or some virus)? Computer university: I usually experience this, using Matlab (R2007a) with System Generator (its respective compatible version) My personal laptop: It´s usually works well but when stopped periods became to appears I know in not much time it will became totally stopped. I usually see how Word 2007 get stopped and after a while my windows xp gets stopped. (well I can access to the the manage task pressing ctr+alt and...). The only solution I see is to kill program by program... My petition: Please, I need good references that help me how to think in order to avoid or to manage the problems previously described. Does anyone know usefull books or articles? EDIT: Laptop: OS: XP Home Edition Version 2002 SP3 Hardware: HP Mini Intel(R)Atom(TM) CPU N270 @1,60GHz 1.99 GB RAM University Computer: OS: XP Profesional SP3 Hardware: AMD Athlon(tm) XP 1800+ 1.54 GHz, 768 MB RAM

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