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  • Simple UPDATE query with (sometime) long query times

    - by Eric
    I run a dedicated MySQL server (2 cores, 16GB RAM) serving 100-200 requests per second. It is getting sluggish during peak traffic and I have a hard time optimizing the server. So I'm looking for some ideas now that I have done lots of Innodb fine-tuning with the "TUNING PRIMER" The query that now generates most slow queries is the following (see result from mysqldumpslow): Count: 433 Time=3.40s (1470s) Lock=0.00s (0s) Rows=0.0 (0), UPDATE user_sessions SET tid='S' WHERE idsession='S' I am very surprised to have so many long queries for such a simple query with no locking. Fyi, the table is InnoDB and has 14000 rows. It contains all active sessions on the site with approx 10 UPDATE and SELECT hits per second. Here is its structure: CREATE TABLE `user_sessions` ( `personid` mediumint(9) NOT NULL DEFAULT '0', `ip` varchar(18) COLLATE utf8_unicode_ci NOT NULL, `idsession` varchar(32) COLLATE utf8_unicode_ci NOT NULL, `datum` date NOT NULL DEFAULT '0000-00-00', `tid` time NOT NULL DEFAULT '00:00:00', `status` tinyint(4) NOT NULL DEFAULT '0', KEY `personid` (`personid`), KEY `idsession` (`idsession`), KEY `datum` (`datum`) ) ENGINE=InnoDB DEFAULT CHARSET=utf8 COLLATE=utf8_unicode_ci Any ideas?

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  • kill SIGABRT does not generate core file from daemon started from crontab.

    - by Guma
    I am running CentOS 5.5 and working on server application that sometimes I need to force core dump so I can see what is going on. If I start my server from shell and send kill SIGABRT, a core file is created. If I start same program from crontab and then I send the same signal to it the server is "killed" but no core file is generated. Does any one know why is that and what need to be added to my code or changed in system settings to allow core file generation? Just a side note I have ulimit set to unlimited in /etc/profile I have set kernel.core_uses_pid = 1 kernel.core_pattern=/var/cores/%h-%e-%p.core in /etc/sysctl.conf Also my server app was added to crontab under same login id as I am running it from shell. Any help greatly appreciated

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  • MySql calculate number of connections needed

    - by Udi I
    I am trying to figure my needs regarding web service hosting. After trying Azure I have realized that the default MySql they provide (through a third party) limits the account to 4 connections. You can then upgrade the account to 15, 30 or 40 connections (which is quite expensive). Their 15 connections plan is descirbed as: "Excellent choice for light test and staging apps that need a reliable MySQL database". I have 2 questions: if my application is a web service which needs to preform ~120k Queries a day (Normal/BELL distribution) and each query is ~150ms(duration)/~400ms(fetch), how many connection do I need? If instead of using cloud computing, I will choose a VPS, how many connections will I be able to handle on a 1GB 2 cores VPS? Thank you!

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  • Ubuntu make symbolic link between new folder in Home to existing folder

    - by Fath
    Hello, To the point. I have Ubuntu Maverick running on my Lenovo G450. Before, it was Windows 7. All my data are inside another partition, its NTFS. FSTAB line to mount that partition : /dev/sda5 /data ntfs auto,users,uid=1000,gid=1000,utf8,dmask=027,fmask=137 0 0 Inside /data there are folder Musics, Graphics, Tools, Cores, etc. If I'm about to create new folder, let see, GFX on /home/apronouva/GFX and make it link or pointing to /data/Graphics, how do I do that ? So when I open /home/apronouva/GFX the content will be the same as inside /data/Graphics .. and whatever changes I made inside GFX, it will also affect /data/Graphics I tried : $ ln -s /data/Graphics /home/apronouva/GFX it resulted : error, cannot make symbolic link between folder Thanks in advance, Fath

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  • 1tera flop cluster?

    - by Adobe
    I want to buy a $40000 1 tera flop cluster to keep it in a room. What are the standard configurations? Cluster is supposed to do molecular dynamics simulations on biological systems. I'm proposed a 4 pc with 8 cores each by the selling company I'm deadling with. It looks like I also need infiniband. Does some one has an experience -- what phisical memory should I buy etc? I know things change very quickly... Still there might be a point or two to state. Edit: OS is supposed to be linux, application is gromacs.

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  • GPU Computing - # of GPUs supported

    - by TehTypoKing
    I currently have a desktop with 6 GPUs ( 3x HD 5970s ) in non-crossfire mode. Unfortunately, it seems that Windows 7 64bit only supports up to 4 GPUs. I have not been able to find a reliable source to deny or confirm this. If windows 7 has this limitation, is there a Linux flavor that supports more than 4 GPUs? In-case you are wondering, this is not for gaming but high-speed single precision computing. With this current setup ( if I can find 6gpu support ) I am looking to reach 13.8 Teraflops. Also, my motherboard does support 3 16x pci-xpress gen2 slots... and I have a 1500w powersupply plugged into a 20amp outlet. Windows is able to detect all 6 cores.. although, 2 of which displays the warning "Drivers failed to load". To recap: - Can windows support 6 GPUs? - If not, does Linux? Thank you.

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  • Apps not starting on Mac OS X Lion

    - by KPS
    I have a strange problem, some apps that I download do not launch. There are 2 scenarios The application starts but keeps bouncing, once I click the bouncing icon in the tray it disappears. The process also closes in activity monitor The application fails to start, how ever many times I launch it, it refuses. The process does not even show up in activity monitor What I have done so far to resolve: Repaired permissions Clear all cache/temp using CleanMyMac Used DiskWarrior via OS and not during boot Additional Info: Model Name: MacBook Pro Model Identifier: MacBookPro5,2 Processor Name: Intel Core 2 Duo Processor Speed: 2.8 GHz Number of Processors: 1 Total Number of Cores: 2 L2 Cache: 6 MB Memory: 8 GB Bus Speed: 1.07 GHz Boot ROM Version: MBP52.008E.B05 SMC Version (system): 1.42f4

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  • TORQUE: Find out why the job is queued?

    - by ahmad
    Under TORQUE-MAUI job scheduling system, there are several reasons to have a job stayed in Q state. Those that I know are: There are not enough resource to run the Queued job. The user is not allowed to have further running jobs. The user is not allowed to have further computation cores. Is there any other reason to have the queued job? Further information: I am asking the question because I have couple of queued jobs while some nodes are free, pbs_mom is on on them, and mauid limitations are generously large. Thanks in advance.

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  • How to have a soft-real-time process in presense of heavily swapping IO-intensive background load?

    - by Vi
    schedtool: PID 32301: PRIO 4, POLICY R: SCHED_RR , NICE -20, AFFINITY 0xf ionice: realtime: prio 4 But the music is stumbling anyway. Background load is low prio (SCHED_IDLEPRIO, idle ionice), but uses a lot of memory (more than is physically available) and does a lot of IO and calculations. Latencytop shows about 1500ms for: Following symlink Writing buffer to disk (sync) Page fault Writing a page to disk both for the bg load and for unrelated processes. Load average is 10 and counting. Why cannot it allocate, for example, 200MHZ of one of the cores and 32M of memory and not less than once per second opportunity for IO for mplayer to make it happy while continuing calculations on the background? Or: why it cannot leave background task and swap loving each other but keeping the rest of the system as if there were no background load? How to have RT processes AND heavy bg load simultaneously (without of virtual machines)?

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  • Need help upgrading MacBookPro3,1 RAM to 4GB.

    - by Fantomas
    My questions are: 1) Where to buy it and what to buy? I have heard that this RAM is generic enough and it does not have to come from Apple. 2) Can I reuse my existing stick(s)? Would I have a single 2GB module, or 2 x 1GB modules? 3) If I have 2GB already, is it a good idea to have one old stick and one new one? Which one is better placed at the top and which one at the bottom? Let me know what questions you have. My computer's info: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro3,1 Processor Name: Intel Core 2 Duo Processor Speed: 2.4 GHz Number Of Processors: 1 Total Number Of Cores: 2 L2 Cache: 4 MB Memory: 2 GB Bus Speed: 800 MHz Boot ROM Version: MBP31.0070.B07 SMC Version (system): 1.16f11

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  • windows 7 frequently crashes when running 64 bit debian on virtualbox

    - by erin c
    I've been having some hard times with Virtualbox. I use it to run 64-bit Debian guest on a Windows 7 host to be able to code for linux systems. It generally crashes when I build my code in eclipse cdt, or if I am doing some intensive operations. Should I lower the memory and core usage? Is this some sort of virtualbox problem? I upgraded to virtualbox v4.1.8 and the problem still occurs. My virtual machine instance uses 1736MB out of 4GB of ram, and I use 2 out of 8 processor cores. But still, the whole thing crashes 1 or 2 times every single day.

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  • One bigger Virtual Machine distributed across many Nodes [on hold]

    - by flyer
    I just setup virtual machines on one hardware with Vagrant (this is just a test environment, not production!). I want to use a Puppet to configure them and next try to setup OpenStack. I am not sure If I am understanding how this should look at the end. Is it possible to have below architecture with OpenStack after all where I will run one Virtual Machine with Linux? ------------------------------- | VM | ------------------------------- | NOVA | NOVA | NOVA | ------------------------------- | OpenStack | ------------------------------- | Node | Node | Node | ------------------------------- (In my environment Nodes are just virtual machines, but my question concerns separate Hardware nodes) After some comments... Is it a language barrier, or? This is only my 'virtual environment'. If we imagine this virtual machines are a separate Nodes (e.g. every has 4 cores) the OpenStack is still the same, right? Can I run one Virtual Machine across many Nodes with OpenStack? Is it possible to aggregate the computation power of separate machines in one virtual distributed operating system?

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  • SQL server availability issue: large query stops other connections from connecting

    - by Carlos
    I've got a high-spec (multicore, RAID) server running MS SQL 2008, with several databases on it. I have a low throughput process that periodically needs a small amount of information from one of the DBs, and the code seems to work fine. However, sometimes when one of my colleagues does a huge query against one of the other DBs, I see full CPU usage on the machine, and connections from my app time out. Why does this happen? I would have thought the many cores and harddisks would somehow (together with cleverly written DB server) be able to keep at least some of the resources free for other apps? I'm pretty sure he doesn't use multiple connections for his query. What can I do to prevent this?

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  • Why is process not being displayed by TOP

    - by drN
    I am running a Mathematica script (this question probably doesn't fit in Mathematica.SE however) and I know that it generally takes up a lot of RAM and loads up my cores. However, althought pgrep MathKernel is showing a pid, I find that top doesn't show this in the top processes, although I notice that it is taking up about 2.25GB of the 8GB available to me. pmap -x my_process_id total kB 2243132 1907404 1892108 AND ps aux | grep MathKernel dnaneet 20837 12.6 23.3 2234944 1907404 pts/1 Sl 09:23 8:01 /share/apps/mathematica/8.0.4/SystemFiles/Kernel/Binaries/Linux-x86-64/MathKernel -runfirst $TopDirectory="/share/apps/mathematica/8.0.4" -script ./dcm_10micrometer_2x -- ./dcm_10micrometer_2x ps aux shows that the process is taking about 12% (In asterisks) dnaneet 20601 0.0 0.0 68264 1660 pts/1 Ss 09:15 0:00 -bash **dnaneet 20837 12.2 23.3 2234944 1907404 pts/1 Sl 09:23 8:01 /share/apps/mat** dnaneet 21922 0.0 0.0 65604 948 pts/1 R+ 10:29 0:00 ps -aux Did this process fail and is the MathKernel just lingering?

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  • Multithreaded Windows FOR batch command

    - by Axarydax
    Hi, do you know if there is a simple way to run FOR command in batch file on multiple threads? What's the point of having 4 cores if I can't run my tasks in 4 parallel threads? For example, if I am optimizing PNGs with PNGOUT, the command I would use is for %i in (*.png) do pngout "%i" But this is highly paralellizable task in which the sub-tasks do not depend on each other at all. To run this in 4 'queues' I'd write something like for -thread 4 %i in (*.png) do pngout "%i" Do I need to write my own for-like app that would be able to do this or is there available free solution?

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  • Server OS: put it on a separate drive? Yes, no, or depends on the situation?

    - by captainentropy
    Hi, I would like opinions, or facts, both preferably, on whether it's ok to install a server's OS on the RAID array or not. I would predict installation on separate drives is the best but I'm interested in the performance. The server in question will have 8 cores (2.4GHz ea.), 24GB RAM, and ~16TB of usable space of server-class drives in RAID10. There is also a subsytem of an ~equivalent size for backup. I will be running CPU/memory intesive applications on this server in addition to it being file storage for my work (research lab). IF I install the OS (haven't decided which one, probably Ubuntu or Fedora or some other good linux distro) on separate drives will there be any performance problems if they aren't configured in RAID10? IF it is better to have the OS on separate drives should I go for 150GB velociraptors in RAID1 or smallish SSD drives in RAID1? Money is unfortunately a factor as I think I'm close to maxing my budget as it is. Thanks!

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  • SSD on Vmware ESXI 4 (TRIM? Good Idea?)

    - by nextgenneo
    Hi, I just posted about finding bottle necks and have narrowed it down to having way too many VMs on my machine on one 15K SAS drive. I have plenty of cores and plenty of ram. So I am planning on putting 6 VMs on one drive (so 5 drives for 30 VMs). I am thinking of using a 60GB Vertex 2 SSD. Each of my VMs will only need about 6GB of HDD space so this isn't a big deal. My questions are: does ESXI support Trim and do I really need it if I leave 25% of the drive as free space? If I need it should I get a diff drive that handles garbage collection differently? I have a RAID controller w/ write caching. I will still benefit from this? Will this effect my setup differently? Is there anything I need to consider regarding SSD's in virtualized environments. Thanks for any and all help!

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  • Windows 2008 Server on VMWare (hardware)

    - by Bill
    I want to setup a single server to run a few virtual servers for our datacenter. I do not have a lot of money to spend so I am trying to gain bang for the buck. My budget is around $2,000. So I was thinking about building the following as the VMWare physical server: Intel iCore 7 950 (LGA1366, 4 cores,8 threads) Gigabyte GA-X58-USB3 LGA 1366 X58 ATX Intel Motherboard 24 GB of Viper II Series, Sector 7 Edition, Extreme Performance DDR3-1600 (PC3-12800) CL9 Triple Channel Memory VelociRaptor 300GB 10,000 RPM SATA 3.0Gb/s 3.5" Internal Hard Drive I am planning on running the newest version of VMWare ESXi (64-bit). On these I am planning on running a few various servers: Windows 2008 Server R2 w/ IIS (several custom built ASP.NET Apps) Windows 2008 Server R2 w/ MS SQL 2008 Database Server Linux Web Server w/ Several WordPress Blogs (XAMPP?) Windows 2008 Server R2 w/ IIS (DEV ENVIRONMENT) Windows 2008 Server R2 w/ MS SQL 2008 Database Server (DEV ENVIRONMENT) In your opinion, will this hardware be sufficient to run the above load with room for possible 2-3 more virtual machines (probably lightweight web servers)?

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  • NFS of NAS server blocks in cluster environment

    - by Zardoz
    In our department we have an Iomega NAS (px4-300d) connected to a Supermicro cluster with 5 nodes (12 cores per node). Each node mounts a share on that NAS by using NFS. Unfortunately after some time (several minutes) of permanent read/write operations (from all nodes) the NAS starts to block and a bit later freezes completely. We tried several options of the mount command, but nothing helped (async, intr, wsize, rsize). The NAS itself doesn't allow many options (better to say none). Do you have any recommendation how to integrate a NAS using NFS in a cluster environment?

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  • Linux freezes every few seconds

    - by Zeppomedio
    We're having an issue where one our Linux boxes (Ubuntu 10.04 LTS, running on EC2 with a quadruple-large size, 68GB of RAM and 8 virtual cores with 3.25GHz each) freezes up every few seconds. Typing in an ssh session will freeze, and running strace on one of the Postgresql processes that's running usually shows: 02:37:41.567990 semop(7831581, {{3, -1, 0}}, 1 for a few seconds before it proceeds (it always gets stuck at that semop). OProfile shows that most of the time is spent in the kernel (60%) versus 37% in Postgresql. The result of these halts (which began suddenly a day ago) is that load on the box has gone from 0.7 to 10+, and causes our entire stack to slow done. Any ideas on how to track down what's going on? iostat doesn't show the disks being particularly slow or overloaded, and top shows user cpu % spike from 8% to about 40% whenever these back-ups happen.

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  • Passenger/Rails not releasing memory

    - by michaeldelorenzo
    I have an Ubuntu server running three separate Rails (2.3.8) applications with Passenger, REE and Apache. Recently we started experiencing problems with ruby processes eating up memory and consuming entire cores on our server. Here's what we're getting... %CPU PID USER COMMAND 99.9 1717 nobody Rails: /var/www/api 99.6 5542 nobody Rails: /var/www/api 97.3 1223 nobody Rails: /var/www/api 4.7 5537 nobody Passenger ApplicationSpawner: /var/www/api 10.5 1801 nobody Rails: /var/www/api We've also seen instances where there have been over 100 instances of Apache running. These applications have been running for a few months without an of these issues, but in the last day or so we've been noticing this. The site referenced here is a Rails application that is a RESTful API so it serves many requests every minute. Any guidance on what we should be checking or looking out for would be appreciated.

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  • Multiple SQL Standard Instances on 4 Processor/32-core Server

    - by Theowood
    We have a large 4 processor/32-core server with 192GB of memory available in the data center and over twenty small SQL Standard databases to consolidate. They are a mix of SQL 2012 and 2008 R2 for 3rd-party apps. Is there any issue with simply installing two instances of SQL Standard on the server - one for 2012 and one for 2008 R2 ? Each instance will use up to 64GB out of the 192GB and 16 cores. If we did this with Enterprise, the licensing would be a fortune and the Enterprise features are not needed.

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  • Improve efficiency when using parallel to read from compressed stream

    - by Yoga
    Is another question extended from the previous one [1] I have a compressed file and stream them to feed into a python program, e.g. bzcat data.bz2 | parallel --no-notice -j16 --pipe python parse.py > result.txt The parse.py can read from stdin continusuoly and print to stdout My ec2 instance is 16 cores but from the top command it is showing 3 to 4 load average only. From the ps, I am seeing a lot of stuffs like.. sh -c 'dd bs=1 count=1 of=/tmp/7D_YxccfY7.chr 2>/dev/null'; I know I can improve using the -a in.txtto improve performance, but with my case I am streaming from bz2 (I cannot exact it since I don't have enought disk space) How to improve the efficiency for my case? [1] Gnu parallel not utilizing all the CPU

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  • What's better for deploying a website + DB on EC2: 2 small VM or a large one?

    - by devguy
    I'm planning the deployment of a mid-sized website with a SQL Server Standard DB. I've chosen Amazon EC2 to deploy it. I now have to choose between these 2 options: 1) get 2 small instances (1 core each, 1.7 GB of ram each): one for the IIS front-end, one for running the DB. Note: these "small instances" can only run the 32-bit version of Win2008 Server 2) a single large instance (4 cores, 7.5 gb of ram) where I'd install both IIS and the SQL Server. Note: this large instance can only run the 64-bit version of Win2008 Server What's better in terms on performance, scalability, ease of management (launch up a new instance while I backup the principal instance) etc. All suggestions and points of view are welcome!

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  • Configuring MPI on 2 nodes

    - by Wysek
    I'm trying to create really simple "cluster" from 2 multicore computers using openmpi. My problem is that I can't find any tutorials on that matter. I don't want to use torque because it's not necessary in my case nevertheless all tutorials give configuration details either about torque or mpd (which doesn't exist in openmpi implementation). Could you give me some tips or links to appropriate manuals? Steps I've already completed: - openmpi installation - network configuration (computers see each other) - ssh password-less login to second computer I tried using machinefiles without further configuration and with just 2 IPs in it. But jobs don't seem to start at all after initialization part. (MPI seems to work because I'm able to scatter jobs on multiple cores of both computers without communication between them).

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