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  • making binned boxplot in matplotlib with numpy and scipy in Python

    - by user248237
    I have a 2-d array containing pairs of values and I'd like to make a boxplot of the y-values by different bins of the x-values. I.e. if the array is: my_array = array([[1, 40.5], [4.5, 60], ...]]) then I'd like to bin my_array[:, 0] and then for each of the bins, produce a boxplot of the corresponding my_array[:, 1] values that fall into each box. So in the end I want the plot to contain number of bins-many box plots. I tried the following: min_x = min(my_array[:, 0]) max_x = max(my_array[:, 1]) num_bins = 3 bins = linspace(min_x, max_x, num_bins) elts_to_bins = digitize(my_array[:, 0], bins) However, this gives me values in elts_to_bins that range from 1 to 3. I thought I should get 0-based indices for the bins, and I only wanted 3 bins. I'm assuming this is due to some trickyness with how bins are represented in linspace vs. digitize. What is the easiest way to achieve this? I want num_bins-many equally spaced bins, with the first bin containing the lower half of the data and the upper bin containing the upper half... i.e., I want each data point to fall into some bin, so that I can make a boxplot. thanks.

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  • Match HTML tags in two strings using regex in Python

    - by jack
    I want to verify that the HTML tags present in a source string are also present in a target string. For example: >> source = '<em>Hello</em><label>What's your name</label>' >> verify_target(’<em>Hi</em><label>My name is Jim</label>') True >> verify_target('<label>My name is Jim</label><em>Hi</em>') True >> verify_target('<em>Hi<label>My name is Jim</label></em>') False

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  • Python 4 step setup with progressBars

    - by Samuel Taylor
    I'm having a problem with the code below. When I run it the progress bar will pulse for around 10 secs as meant to and then move on to downloading and will show the progress but when finished it will not move on to the next step it just locks up. import sys import time import pygtk import gtk import gobject import threading import urllib import urlparse class WorkerThread(threading.Thread): def __init__ (self, function, parent, arg = None): threading.Thread.__init__(self) self.function = function self.parent = parent self.arg = arg self.parent.still_working = True def run(self): # when does "run" get executed? self.parent.still_working = True if self.arg == None: self.function() else: self.function(self.arg) self.parent.still_working = False def stop(self): self = None class MainWindow: def __init__(self): gtk.gdk.threads_init() self.wTree = gtk.Builder() self.wTree.add_from_file("gui.glade") self.mainWindows() def mainWindows(self): self.mainWindow = self.wTree.get_object("frmMain") dic = { "on_btnNext_clicked" : self.mainWindowNext, } self.wTree.connect_signals(dic) self.mainWindow.show() self.installerStep = 0 # 0 = none, 1 = preinstall, 2 = download, 3 = install info, 4 = install #gtk.main() self.mainWindowNext() def pulse(self): self.wTree.get_object("progress").pulse() if self.still_working == False: self.mainWindowNext() return self.still_working def preinstallStep(self): self.wTree.get_object("progress").set_fraction(0) self.wTree.get_object("btnNext").set_sensitive(0) self.wTree.get_object("notebook1").set_current_page(0) self.installerStep = 1 WT = WorkerThread(self.heavyWork, self) #Would do a heavy function here like setup some thing WT.start() gobject.timeout_add(75, self.pulse) def downloadStep(self): self.wTree.get_object("progress").set_fraction(0) self.wTree.get_object("btnNext").set_sensitive(0) self.wTree.get_object("notebook1").set_current_page(0) self.installerStep = 2 urllib.urlretrieve('http://mozilla.mirrors.evolva.ro//firefox/releases/3.6.3/win32/en-US/Firefox%20Setup%203.6.3.exe', '/tmp/firefox.exe', self.updateHook) self.mainWindowNext() def updateHook(self, blocks, blockSize, totalSize): percentage = float ( blocks * blockSize ) / totalSize if percentage > 1: percentage = 1 self.wTree.get_object("progress").set_fraction(percentage) while gtk.events_pending(): gtk.main_iteration() def installInfoStep(self): self.wTree.get_object("btnNext").set_sensitive(1) self.wTree.get_object("notebook1").set_current_page(1) self.installerStep = 3 def installStep(self): self.wTree.get_object("progress").set_fraction(0) self.wTree.get_object("btnNext").set_sensitive(0) self.wTree.get_object("notebook1").set_current_page(0) self.installerStep = 4 WT = WorkerThread(self.heavyWork, self) #Would do a heavy function here like setup some thing WT.start() gobject.timeout_add(75, self.pulse) def mainWindowNext(self, widget = None): if self.installerStep == 0: self.preinstallStep() elif self.installerStep == 1: self.downloadStep() elif self.installerStep == 2: self.installInfoStep() elif self.installerStep == 3: self.installStep() elif self.installerStep == 4: sys.exit(0) def heavyWork(self): time.sleep(10) if __name__ == '__main__': MainWindow() gtk.main()

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  • Python: how to inherite and override

    - by Guy
    Consider this situation: I get an object of type A which has the function f. I.e: class A: def f(): print 'in f' def h(): print 'in h' and I get an instance of this class but I want to override the f function but save the rest of the functionality of A. So what I was thinking was something of the sort: class B(A): .... def f(): print 'in B->f' and the usage would be: def main(a): b = B(a) b.f() #prints "in B->f" b.h() #print "in h" How do you do such a thing?

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  • Compute divergence of vector field using python

    - by nyvltak
    Is there a function that could be used for calculation of the divergence of the vectorial field? (in matlab http://www.mathworks.ch/help/techdoc/ref/divergence.html) I would expect it exists in numpy/scipy but I can not find it using google :(. # I need to calculate div[A * grad(F)], where F = np.array([[1,2,3,4],[5,6,7,8]]) (2D numpy ndarray) A = np.array([[1,2,3,4],[1,2,3,4]]) (2D numpy ndarray) so grad(F) is a set of 2D ndarrays # I know, I can calculate divergence like this: http://en.wikipedia.org/wiki/Divergence#Application_in_Cartesian_coordinates but do not want to reinvent the wheel. (and also I expent there is some optimized function)

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  • Python beginner confused by a complex line of code

    - by Protean
    I understand the gist of the code, that it forms permutations; however, I was wondering if someone could explain exactly what is going on in the return statement. def perm(l): sz = len(l) print (l) if sz <= 1: print ('sz <= 1') return [l] return [p[:i]+[l[0]]+p[i:] for i in range(sz) for p in perm(l[1:])]

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  • how to create a dynamic sql statement w/ python and mysqldb

    - by Elias Bachaalany
    I have the following code: def sql_exec(self, sql_stmt, args = tuple()): """ Executes an SQL statement and returns a cursor. An SQL exception might be raised on error @return: SQL cursor object """ cursor = self.conn.cursor() if self.__debug_sql: try: print "sql_exec: " % (sql_stmt % args) except: print "sql_exec: " % sql_stmt cursor.execute(sql_stmt, args) return cursor def test(self, limit = 0): result = sql_exec(""" SELECT * FROM table """ + ("LIMIT %s" if limit else ""), (limit, )) while True: row = result.fetchone() if not row: break print row result.close() How can I nicely write test() so it works with or without 'limit' without having to write two queries?

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  • Python how to execute generate code ?

    - by Natim
    Hello guys I have this code, and I would like to use the app parameter to generate the code instead of duplicating it. if app == 'map': try: from modulo.map.views import map return map(request, *args, **kwargs) except ImportError: pass elif app == 'schedule': try: from modulo.schedule.views import schedule_day return schedule_day(request, *args, **kwargs) except ImportError: pass elif app == 'sponsors': try: from modulo.sponsors.views import sponsors return sponsors(request, *args, **kwargs) except ImportError: pass elif app == 'streaming': try: from modulo.streaming.views import streaming return streaming(request, *args, **kwargs) except ImportError: pass Do you have any idea ? Thanks

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  • how to check the read write status of storing media in python

    - by mukul sharma
    Hi All, How can i check the read/ write permission of the file storing media? ie assume i have to write some file inside a directory and that directory may be available on read only media like (cd or dvd)or etc. So how can i check that storing media ( cd, hard disk) having a read only or read write both permission. I am using windows xp os. Thanks.

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  • Python: writing a program to compute the area of a circle and square

    - by user1672504
    I have a question with an assignment. I'm not sure how to write this program and I really need help! Could someone help me with this? This is the assignment: Write a program that asks the user to enter two values: an integer choice and a real number x. If choice is 1, compute and display the area of a circle of radius x. If choice is 2, compute and display the are of a square with sides of length x. If choice is neither 1, nor 2, will display the text Invalid choice. Sample run: Enter choice: 2 Enter x: 8 The area is: 64.0 Sample run: Enter choice: 1 Enter x: 8 The area is: 201.06176 My attempt: choice = input ('Enter Choice:') choice_1 = int (choice) if (choice_1==1): radius = (int) print('Enter x:',radius) pi = 3.14159 area = ( radius ** 2 ) * pi print ( 'The Area is=' , area )

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  • Access static class variable of parent class in Python

    - by fuenfundachtzig
    I have someting like this class A: __a = 0 def __init__(self): A.__a = A.__a + 1 def a(self): return A.__a class B(A): def __init__(self): # how can I access / modify A.__a here? A.__a = A.__a + 1 # does not work def a(self): return A.__a Can I access the __astatic variable in B? It's possible writing a instead of __a, is this the only way? (I guess the answer might be rather short: yes :)

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  • Python: how to execute generated code ?

    - by Natim
    Hello guys I have this code, and I would like to use the app parameter to generate the code instead of duplicating it. if app == 'map': try: from modulo.map.views import map return map(request, *args, **kwargs) except ImportError: pass elif app == 'schedule': try: from modulo.schedule.views import schedule_day return schedule_day(request, *args, **kwargs) except ImportError: pass elif app == 'sponsors': try: from modulo.sponsors.views import sponsors return sponsors(request, *args, **kwargs) except ImportError: pass elif app == 'streaming': try: from modulo.streaming.views import streaming return streaming(request, *args, **kwargs) except ImportError: pass Do you have any idea ? Thanks

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  • Python beautiful soup arguments

    - by scott
    Hi I have this code that fetches some text from a page using BeautifulSoup soup= BeautifulSoup(html) body = soup.find('div' , {'id':'body'}) print body I would like to make this as a reusable function that takes in some htmltext and the tags to match it like the following def parse(html, atrs): soup= BeautifulSoup(html) body = soup.find(atrs) return body But if i make a call like this parse(htmlpage, ('div' , {'id':'body'}")) or like parse(htmlpage, ['div' , {'id':'body'}"]) I get only the div element, the body attribute seems to get ignored. Is there a way to fix this?

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  • DEADLOCK_WRAP error when using Berkeley Db in python (bsddb)

    - by JiminyCricket
    I am using a berkdb to store a huge list of key-value pairs but for some reason when i try to access some of the data later i get this error: try: key = 'scrape011201-590652' contenttext = contentdict[key] except: print the error <type 'exceptions.KeyError'> 'scrape011201-590652' in contenttext = contentdict[key]\n', ' File "/usr/lib64/python2.5/bsddb/__init__.py", line 223, in __getitem__\n return _DeadlockWrap(lambda: self.db[key]) # self.db[key]\n', 'File "/usr/lib64/python2.5/bsddb/dbutils.py", line 62, in DeadlockWrap\n return function(*_args, **_kwargs)\n', ' File "/usr/lib64/python2.5/bsddb/__init__.py", line 223, in <lambda>\n return _DeadlockWrap(lambda: self.db[key]) # self.db[key]\n'] I am not sure what DeadlockWrap is but there isnt any other program or process accessing the berkdb or writing to it (as far as i know,) so not sure how we could get a deadlock, if its referring to that. Is it possible that I am trying to access the data to rapidly? I have this function call in a loop, so something like for i in hugelist: #try to get a value from the berkdb #do something with it I am running this with multiple datasets and this error only occurs with one of them, the largest one, not the others.

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  • Static lock in Python?

    - by roddik
    Hello. I've got the following code: import time import threading class BaseWrapper: #static class lock = threading.Lock() @staticmethod def synchronized_def(): BaseWrapper.lock.acquire() time.sleep(5) BaseWrapper.lock.release() def test(): print time.ctime() if __name__ is '__main__': for i in xrange(10): threading.Thread(target = test).start() I want to have a method synchronized using static lock. However the above code prints the same time ten times, so it isn't really locking. How can I fix it? TIA

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  • Small Python optional arguments question

    - by ooboo
    I have two functions: def f(a,b,c=g(b)): blabla def g(n): blabla c is an optional argument in function f. If the user does not specify its value, the program should compute g(b) and that would be the value of c. But the code does not compile - it says name 'b' is not defined. How to fix that? Someone suggested: def g(b): blabla def f(a,b,c=None): if c is None: c = g(b) blabla But this doesn't work, because maybe the user intended c to be None and then c will have another value.

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  • Queuing methods to be run on an object by different threads in Python

    - by Ben
    Let's say I have an object who's class definition looks like: class Command: foo = 5 def run(self, bar): time.sleep(1) self.foo = bar return self.foo If this class is instantiated once, but different threads are hitting its run method (via an HTTP request, handled separately) passing in different args, what is the best method to queue them? Can this be done in the class definition itself?

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  • Running a Python script outside of Django

    - by geejay
    I have a script which uses the Django ORM features, amongst other external libraries, that I want to run outside of Django (that is, executed from the command-line). Edit: At the moment, I can launch it by navigating to a URL... How do I setup the environment for this?

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