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  • Forensic Analysis of the OOM-Killer

    - by Oddthinking
    Ubuntu's Out-Of-Memory Killer wreaked havoc on my server, quietly assassinating my applications, sendmail, apache and others. I've managed to learn what the OOM Killer is, and about its "badness" rules. While my machine is small, my applications are even smaller, and typically only half of my physical memory is in use, let alone swap-space, so I was surprised. I am trying to work out the culprit, but I don't know how to read the OOM-Killer logs. Can anyone please point me to a tutorial on how to read the data in the logs (what are ve, free and gen?), or help me parse these logs? Apr 20 20:03:27 EL135 kernel: kill_signal(13516.0): selecting to kill, queued 0, seq 1, exc 2326 0 goal 2326 0... Apr 20 20:03:27 EL135 kernel: kill_signal(13516.0): task ebb0c6f0, thg d33a1b00, sig 1 Apr 20 20:03:27 EL135 kernel: kill_signal(13516.0): selected 1, signalled 1, queued 1, seq 1, exc 2326 0 red 61795 745 Apr 20 20:03:27 EL135 kernel: kill_signal(13516.0): selecting to kill, queued 0, seq 2, exc 122 0 goal 383 0... Apr 20 20:03:27 EL135 kernel: kill_signal(13516.0): task ebb0c6f0, thg d33a1b00, sig 1 Apr 20 20:03:27 EL135 kernel: kill_signal(13516.0): selected 1, signalled 1, queued 1, seq 2, exc 383 0 red 61795 745 Apr 20 20:03:27 EL135 kernel: kill_signal(13516.0): task ebb0c6f0, thg d33a1b00, sig 2 Apr 20 20:03:27 EL135 kernel: OOM killed process watchdog (pid=14490, ve=13516) exited, free=43104 gen=24501. Apr 20 20:03:27 EL135 kernel: OOM killed process tail (pid=4457, ve=13516) exited, free=43104 gen=24502. Apr 20 20:03:27 EL135 kernel: OOM killed process ntpd (pid=10816, ve=13516) exited, free=43104 gen=24503. Apr 20 20:03:27 EL135 kernel: OOM killed process tail (pid=27401, ve=13516) exited, free=43104 gen=24504. Apr 20 20:03:27 EL135 kernel: OOM killed process tail (pid=29009, ve=13516) exited, free=43104 gen=24505. Apr 20 20:03:27 EL135 kernel: OOM killed process apache2 (pid=10557, ve=13516) exited, free=49552 gen=24506. Apr 20 20:03:27 EL135 kernel: OOM killed process apache2 (pid=24983, ve=13516) exited, free=53117 gen=24507. Apr 20 20:03:27 EL135 kernel: OOM killed process apache2 (pid=29129, ve=13516) exited, free=68493 gen=24508. Apr 20 20:03:27 EL135 kernel: OOM killed process sendmail-mta (pid=941, ve=13516) exited, free=68803 gen=24509. Apr 20 20:03:27 EL135 kernel: OOM killed process tail (pid=12418, ve=13516) exited, free=69330 gen=24510. Apr 20 20:03:27 EL135 kernel: OOM killed process python (pid=22953, ve=13516) exited, free=72275 gen=24511. Apr 20 20:03:27 EL135 kernel: OOM killed process apache2 (pid=6624, ve=13516) exited, free=76398 gen=24512. Apr 20 20:03:27 EL135 kernel: OOM killed process python (pid=23317, ve=13516) exited, free=94285 gen=24513. Apr 20 20:03:27 EL135 kernel: OOM killed process tail (pid=29030, ve=13516) exited, free=95339 gen=24514. Apr 20 20:03:28 EL135 kernel: OOM killed process apache2 (pid=20583, ve=13516) exited, free=101663 gen=24515. Apr 20 20:03:28 EL135 kernel: OOM killed process logger (pid=12894, ve=13516) exited, free=101694 gen=24516. Apr 20 20:03:28 EL135 kernel: OOM killed process bash (pid=21119, ve=13516) exited, free=101849 gen=24517. Apr 20 20:03:28 EL135 kernel: OOM killed process atd (pid=991, ve=13516) exited, free=101880 gen=24518. Apr 20 20:03:28 EL135 kernel: OOM killed process apache2 (pid=14649, ve=13516) exited, free=102748 gen=24519. Apr 20 20:03:28 EL135 kernel: OOM killed process grep (pid=21375, ve=13516) exited, free=132167 gen=24520. Apr 20 20:03:57 EL135 kernel: kill_signal(13516.0): selecting to kill, queued 0, seq 4, exc 4215 0 goal 4826 0... Apr 20 20:03:57 EL135 kernel: kill_signal(13516.0): task ede29370, thg df98b880, sig 1 Apr 20 20:03:57 EL135 kernel: kill_signal(13516.0): selected 1, signalled 1, queued 1, seq 4, exc 4826 0 red 189481 331 Apr 20 20:03:57 EL135 kernel: kill_signal(13516.0): task ede29370, thg df98b880, sig 2 Apr 20 20:04:53 EL135 kernel: kill_signal(13516.0): selecting to kill, queued 0, seq 5, exc 3564 0 goal 3564 0... Apr 20 20:04:53 EL135 kernel: kill_signal(13516.0): task c6c90110, thg cdb1a100, sig 1 Apr 20 20:04:53 EL135 kernel: kill_signal(13516.0): selected 1, signalled 1, queued 1, seq 5, exc 3564 0 red 189481 331 Apr 20 20:04:53 EL135 kernel: kill_signal(13516.0): task c6c90110, thg cdb1a100, sig 2 Apr 20 20:07:14 EL135 kernel: kill_signal(13516.0): selecting to kill, queued 0, seq 6, exc 8071 0 goal 8071 0... Apr 20 20:07:14 EL135 kernel: kill_signal(13516.0): task d7294050, thg c03f42c0, sig 1 Apr 20 20:07:14 EL135 kernel: kill_signal(13516.0): selected 1, signalled 1, queued 1, seq 6, exc 8071 0 red 189481 331 Apr 20 20:07:14 EL135 kernel: kill_signal(13516.0): task d7294050, thg c03f42c0, sig 2 Watchdog is a watchdog task, that was idle; nothing in the logs to suggest it had done anything for days. Its job is to restart one of the applications if it dies, so a bit ironic that it is the first to get killed. Tail was monitoring a few logs files. Unlikely to be consuming memory madly. The apache web-server only serves pages to a little old lady who only uses it to get to church on Sundays a couple of developers who were in bed asleep, and hadn't visited a page on the site for a few weeks. The only traffic it might have had is from the port-scanners; all the content is password-protected and not linked from anywhere, so no spiders are interested. Python is running two separate custom applications. Nothing in the logs to suggest they weren't humming along as normal. One of them was a relatively recent implementation, which makes suspect #1. It doesn't have any data-structures of any significance, and normally uses only about 8% of the total physical RAW. It hasn't misbehaved since. The grep is suspect #2, and the one I want to be guilty, because it was a once-off command. The command (which piped the output of a grep -r to another grep) had been started at least 30 minutes earlier, and the fact it was still running is suspicious. However, I wouldn't have thought grep would ever use a significant amount of memory. It took a while for the OOM killer to get to it, which suggests it wasn't going mad, but the OOM killer stopped once it was killed, suggesting it may have been a memory-hog that finally satisfied the OOM killer's blood-lust.

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  • Confusion about TCP packet analysis terms

    - by Berkay
    I'm analyzing our network and have some confusion about the terms: this is the 2-packet output from source to destination. from these i have to get some features as describe, pls make me clear... packets with at least a bytes of TCP data payload: it seems tcp.len0; The minimum segment size (confusion is headers are included or or not) The average segment size observed during the lifetime of the connection, the definition: is calculated as the value reported in the actual data bytes divided by the actual data pkts reported. Total bytes in IP packets, should be ip_len value. Total bytes in (Ethernet) The total number of bytes sent probably related to frame.len and frame.cap_len these two terms are describes as, also make me clear about these two terms. frame.cap_len: Frame length stored into the capture file frame.len: Frame length on the wire

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  • How to extend Wi-Fi signal across rooms?

    - by Sriram Krishnan
    I moved into a new place and my old Wi-Fi router just doesn't have the range to get into all the rooms. I've been investigating a lot of options and I'm wondering what other folks have done here. Moving the current location of my primary Wi-Fi router is not an option thanks to our cable provider and our landlord. Buy a bigger, beefier router (seems expensive). If so, should I go for one of those draft 802.11n ones to avoid microwave/other Wi-Fi router interference? Set up a router with DD-WRT as a repeater Leech the neighbors' open Wi-Fi access point. Alright, I was kidding about the last one but I'm genuinely curious as to what my best option is.

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  • Windows Disk I/O Analysis

    - by Jonathon
    It appears that we are having a problem with the disk i/o speed on our Windows 2003 Enterprise Edition server (64-bit). As we were initializing a database that created two 1G tablespaces on 3 different machines, it became obvious that the two smaller machines (each 32-bit Windows 2003 Standard Edition with less RAM) killed the larger machine when creating the files. The larger machine took 10x as long to create the tablespaces than did the other machines. Now, I am left wondering how that could be. What programs or scripts would you guys recommend for tracking down the I/O problem? I think the issue may be with the controller card (all boxes are hardware RAID 10, but have different controller cards), but I would like to check the actual disk I/O speed as well, so I have some hard numbers to work with. Any help would be appreciated.

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  • Ubuntu 12.04 crash analysis - strange binary data on all open files at the moment of crash

    - by lanbo
    A couple of hours ago we got a system crash on Ubuntu 12.04. We checked all the log files and there is nothing suspicious to blame to. Last stuff that was logged was some dovecot activity. There are no kernel panic messages. Nothing. It is a new server (new hardware) we are testing before production. And because it is new hard, I'm suspicious the problem may be due to some faulty hardware. We already run memtester with no problem detected. I'll be happy to hear from other hardware testing tools (the machine has SSD). Anyway, the thing I wanted to ask you is a different one. The strange thing is on every open file at the moment of the crash we found the next sequence of symbols was written into them: "@^@^@^@^@^@^@...". For example, on the syslog log file we got: Apr 16 15:53:56 odyssey dovecot: pop3-login: Aborted login (auth failed, 1 attempts): user=<info>, method=PLAIN, rip=46.29.255.73, lip=5.9.58.177 ^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^@^ [these continues for about 1000 chars...] ^@^@^@^@Apr 16 15:55:12 odyssey kernel: imklog 5.8.6, log source = /proc/kmsg started. We got all these symbols in all open files. These include: syslog, mail.log, kern.log, ... But also on some logs that are output by php scripts run in CRONs from user accounts (not root). So, any idea why all open files got these characters written during the crash? This is pretty bad since the crash corrupted many files (we don't even know which other ones may be affected). We are suspicious that all open files (in write mode maybe) at the moment of the crash got all these symbols inserted. Why is that? BTW [in case it helps], the system automatically rebooted after the crash but Apache did not start. There were not traces in /var/apache2/*log why apache did not start. After running a "service apache2 start" it started with no problems. Also, we rebooted the machine manually and Apache also started on reboot. But it did not start after the crash and no errors were reported. Thanks guys!

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  • MySQL Non Index Queries Analysis

    - by Markii
    I'm using the log queries not using index but it logs all that use indexes but just more advanced or using IFs. Is there a parser or a program out there that can analyze the log and give me a literal output of saying "table.column should be a index" Thanks

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  • Django "comment_was_flagged" signal

    - by tsoporan
    Hello, This is my first time working with django signals and I would like to hook the "comment_was_flagged" signal provided by the comments app to notify me when a comment is flagged. This is my code, but it doesn't seem to work, am I missing something? from django.contrib.comments.signals import comment_was_flagged from django.core.mail import send_mail def comment_flagged_notification(sender, **kwargs): send_mail('testing moderation', 'testing', 'test@localhost', ['[email protected]',]) comment_was_flagged.connect(comment_flagged_notification) (I am just testing the email for now, but I have assured the email is sending properly.) Thanks!

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  • Algorithm Analysis tool for java

    - by Mansoor
    I am looking for an algorithm analysis tool for java that can calculate Big 0 of a function. Ideal I would like to make it part of my build process, along side of my other code metrics tool. Even after searching on google I am unable to find any opensource of commercial tool. Any suggestion would be welcome Thanks

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  • Signal Handling in C

    - by Dave
    How can I implement signal Handling for Ctrl-C and Ctrl-D in C....So If Ctrl-C is pressed then the program will ignore and try to get the input from the user again...If Ctrl-D is pressed then the program will terminate... My program follows: int main(){ char msg[400]; while(1){ printf("Enter: "); fgets(msg,400,stdin); printf("%s\n",msg); } } Thanks, Dave

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  • Error: Cannot find .net assembly during FxCop analysis

    - by Draco
    I'm running FxCop from MSBuild and during the analysis it throws an error stating that it could not find the System.XML assembly and that I need to specify the location using the /directory parameter, which I then did but it didn't work. Any idea what I should do? I am running it on projects built on .Net 4.0

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  • Data Mining - Predictive Analysis

    - by IMHO
    We are looking at acquiring Data Mining software to primarily run predictive analysis processes. How does SQL Server Data Mining solution compares to other solutions like SPSS from IBM? Since SQL Server DM is included in SQL Server Enterprise license - what would be the justification to spend extra couple 100K to buy separate software just to do DM?

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  • Signal processing or algorithmic programming for a PLC

    - by james singen smythe
    I have an application that takes voltages and temperatures as analog inputs and does some processing using an algorithm which involves signal processing such as low-pass filtering, exponential smoothing, and other steps which might typically be done in a high-level programming language such as C or C++. I'm curious how I could perform these same steps using a PLC, and in particular, the Allen-Bradley Control-Logix system? It seems to me that the instruction set with ladder logic is too limited for this. Could I perform this using structured text?

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  • log analysis for rails

    - by deepak
    i have a rails app which makes heavy use of activeresource and httparty to make api calls. Is there any library/extension to log the requests and parse them, so that log analysis becomes easier and automated. RailsLogAnalyser is good but what about extra calls, what are the conventions? Something like a opensource/self-hosted alternative to newrelic, but with extensions to plug in your own logging.

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  • Agilent E4426B signal generator locks up during multiple GPIB *SAV operations

    - by aspiehler
    I have a test fixture with an Agilent E4426B RF signal generator connected to a PC via a National Instrument Ethernet-to-GPIB bridge. My software is attempting to sanitize the instrument by presetting it and then saving the current state to all of the memory locations writable via the standard SCPI command "*SAV x,y". The loop works to a point, but eventually the instrument responds with an error and continuously displays the "L" icon on the front display and a "Remote preset" message at the bottom. At that point it won't respond to any more remote commands and I have to either cycle power or press LOCAL, then PRESET at which point it takes about 3 minutes to finish presetting. At that point the "L" icon is still present and and the next GPIB command sent to the instrument causes it to report a -113 error (undefined header) in the instrument error queue. I fired up NI spy to see what was happening, and found that the error was happening at the same point in the loop - "*SAV 6,2" in this case. From NI Spy: Send (0, 0x0017, "*SAV 6,2", 8 (0x8), NLend (0,0x01)) Process ID: 0x00000520 Thread ID: 0x00000518 ibsta:0xc168 iberr: 6 ibcntl: 2(0x2) And here's the code from the instrument driver: int CHP_E4426b::Erase() { if ((m_StatusCode = Initialize()) != GPIB_SUCCESS) // basically just sends "*RST" return m_StatusCode; m_SaveState = "*SAV %d, %d"; for (int i=0; i < 10; i++) for (int j=0; j < 100; j++) { sprintf(m_CmdString, m_SaveState, j, i); if ((m_StatusCode = Send(m_CmdString, strlen(m_CmdString))) != GPIB_SUCCESS) return m_StatusCode; } return GPIB_SUCCESS; } I tried putting a small Sleep() delay (10-20 ms) at the end of the inner loop, and to my surprise it caused the error to show up earlier rather than later. 10 ms caused the loop to error out at 44,1 and 20 ms was even sooner. I've already eliminated faulty cabling or the instrument as the culprit. This same type of sequence works without any error on a higher end signal generator, so I'm tempted to chalk this up to a bug in the instrument's firmware.

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  • Workflow for statistical analysis and report writing

    - by ws
    Does anyone have any wisdom on workflows for data analysis related to custom report writing? The use-case is basically this: Client commissions a report that uses data analysis, e.g. a population estimate and related maps for a water district. The analyst downloads some data, munges the data and saves the result (e.g. adding a column for population per unit, or subsetting the data based on district boundaries). The analyst analyzes the data created in (2), gets close to her goal, but sees that needs more data and so goes back to (1). Rinse repeat until the tables and graphics meet QA/QC and satisfy the client. Write report incorporating tables and graphics. Next year, the happy client comes back and wants an update. This should be as simple as updating the upstream data by a new download (e.g. get the building permits from the last year), and pressing a "RECALCULATE" button, unless specifications change. At the moment, I just start a directory and ad-hoc it the best I can. I would like a more systematic approach, so I am hoping someone has figured this out... I use a mix of spreadsheets, SQL, ARCGIS, R, and Unix tools. Thanks! PS: Below is a basic Makefile that checks for dependencies on various intermediate datasets (w/ ".RData" suffix) and scripts (".R" suffix). Make uses timestamps to check dependencies, so if you 'touch ss07por.csv', it will see that this file is newer than all the files / targets that depend on it, and execute the given scripts in order to update them accordingly. This is still a work in progress, including a step for putting into SQL database, and a step for a templating language like sweave. Note that Make relies on tabs in its syntax, so read the manual before cutting and pasting. Enjoy and give feedback! http://www.gnu.org/software/make/manual/html%5Fnode/index.html#Top R=/home/wsprague/R-2.9.2/bin/R persondata.RData : ImportData.R ../../DATA/ss07por.csv Functions.R $R --slave -f ImportData.R persondata.Munged.RData : MungeData.R persondata.RData Functions.R $R --slave -f MungeData.R report.txt: TabulateAndGraph.R persondata.Munged.RData Functions.R $R --slave -f TabulateAndGraph.R report.txt

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  • Clean up upon the kill signal

    - by Begui
    How do you handle clean up when the program receives a kill signal? For instance, there is an application I connect to that wants any third party app (my app) to send a finish command. What is the best say to send that finish command when my app has been destroyed with a kill -9?

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  • sigsetjmp and siglongjmp inside signal handler

    - by EpsilonVector
    How do I: sigsetjmp inside the handler and then return from the handler such that the signal will be unmasked once I siglongjmp back to this point? In pseudo code this is sort of the function that I have: signal_handler(){ if(sigsetjmp(env[i++])) return; else siglongjmp(env[i]); } It's supposed to be the context switch code for user threads in Linux.

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