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  • Why is numpy's einsum faster than numpy's built in functions?

    - by Ophion
    Lets start with three arrays of dtype=np.double. Timings are performed on a intel CPU using numpy 1.7.1 compiled with icc and linked to intel's mkl. A AMD cpu with numpy 1.6.1 compiled with gcc without mkl was also used to verify the timings. Please note the timings scale nearly linearly with system size and are not due to the small overhead incurred in the numpy functions if statements these difference will show up in microseconds not milliseconds: arr_1D=np.arange(500,dtype=np.double) large_arr_1D=np.arange(100000,dtype=np.double) arr_2D=np.arange(500**2,dtype=np.double).reshape(500,500) arr_3D=np.arange(500**3,dtype=np.double).reshape(500,500,500) First lets look at the np.sum function: np.all(np.sum(arr_3D)==np.einsum('ijk->',arr_3D)) True %timeit np.sum(arr_3D) 10 loops, best of 3: 142 ms per loop %timeit np.einsum('ijk->', arr_3D) 10 loops, best of 3: 70.2 ms per loop Powers: np.allclose(arr_3D*arr_3D*arr_3D,np.einsum('ijk,ijk,ijk->ijk',arr_3D,arr_3D,arr_3D)) True %timeit arr_3D*arr_3D*arr_3D 1 loops, best of 3: 1.32 s per loop %timeit np.einsum('ijk,ijk,ijk->ijk', arr_3D, arr_3D, arr_3D) 1 loops, best of 3: 694 ms per loop Outer product: np.all(np.outer(arr_1D,arr_1D)==np.einsum('i,k->ik',arr_1D,arr_1D)) True %timeit np.outer(arr_1D, arr_1D) 1000 loops, best of 3: 411 us per loop %timeit np.einsum('i,k->ik', arr_1D, arr_1D) 1000 loops, best of 3: 245 us per loop All of the above are twice as fast with np.einsum. These should be apples to apples comparisons as everything is specifically of dtype=np.double. I would expect the speed up in an operation like this: np.allclose(np.sum(arr_2D*arr_3D),np.einsum('ij,oij->',arr_2D,arr_3D)) True %timeit np.sum(arr_2D*arr_3D) 1 loops, best of 3: 813 ms per loop %timeit np.einsum('ij,oij->', arr_2D, arr_3D) 10 loops, best of 3: 85.1 ms per loop Einsum seems to be at least twice as fast for np.inner, np.outer, np.kron, and np.sum regardless of axes selection. The primary exception being np.dot as it calls DGEMM from a BLAS library. So why is np.einsum faster that other numpy functions that are equivalent? The DGEMM case for completeness: np.allclose(np.dot(arr_2D,arr_2D),np.einsum('ij,jk',arr_2D,arr_2D)) True %timeit np.einsum('ij,jk',arr_2D,arr_2D) 10 loops, best of 3: 56.1 ms per loop %timeit np.dot(arr_2D,arr_2D) 100 loops, best of 3: 5.17 ms per loop The leading theory is from @sebergs comment that np.einsum can make use of SSE2, but numpy's ufuncs will not until numpy 1.8 (see the change log). I believe this is the correct answer, but have not been able to confirm it. Some limited proof can be found by changing the dtype of input array and observing speed difference and the fact that not everyone observes the same trends in timings.

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  • jquery effects (show)

    - by matthewsteiner
    Is there a way to just have something "show"? I know there's the effect called show, but I mean something with no animation. I know I could make the speed way fast or something. Or I could change the css from hidden or something. But does someone know of a built in method that does that? Same with "hide".

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  • What are the BEST resources for learning WPF & .NET?

    - by dicroce
    I'm a longtime C/C++ Unix guy. I recently started work in a new position that's gonna eventually require C# and WPF (and probably some LINQ). What are the best resources to quickly come up to speed on all these Microsoft technologies? Years ago I read Petzold's book and loved it because it was so complete and by the end I really felt like I knew what I was doing... Is their something equivalent for the .NET world?

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  • When to address managed heap fragmentation

    - by emddudley
    I was reading a blog entry by Josh Smith where he used a cache mechanism in order to "reduce managed heap fragmentation". His caching reduces the number of short-lived objects being created at the cost of slightly slower execution speed. How much of a problem is managed heap fragmentation in a managed language like C#? How can you diagnose if it's an issue? In what situations would you typically need to address it?

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  • Simple 3x3 matrix inverse code (C++)

    - by batty
    What's the easiest way to compute a 3x3 matrix inverse? I'm just looking for a short code snippet that'll do the trick for non-singular matrices, possibly using Cramer's rule. It doesn't need to be highly optimized. I'd prefer simplicity over speed. I'd rather not link in additional libraries. Primarily I was hoping to have this on Stack Overflow so that I wouldn't have to hunt around for it or rewrite from scratch again next time.

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  • Where I can find the USSD commands specification?

    - by Lorenzo Melato
    I need to implement a simple application to send short notify messages on gsm phone display via a GSM modem. I know that I can use the gsm USSD protocol to send messages instead of sms in order to speed up the delivery. Where I can find a detailed reference on the available USSD messages? Where I can find examples or sample applications? All mobile operators supports the USSD protocol? Lorenzo

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  • Continuously 'Rendering template' on freemarker+struts2

    - by Foucrazy
    I'm using struts2 with freemarker (included in struts2 lib) and i'm trying to speed up my web-app. In the logs continuously appear: UIBean.debug(57) | Rendering template /template/xhtml/a FreemarkerTemplateEngine.debug(57) | Rendering template /template/simple/a.ftl and this for each tag. The problem is that i don't know if it's normal, i just set properties for caching templates: struts.properties: struts.freemarker.templatesCache=true and freemarker.properties: template_update_delay=60000

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  • Speeding Up Slow, CPU-Intensive Scrolling in WinForms

    - by S B
    How can I speed up the scrolling of UserControls in a WinForms app.? My main form has trouble scrolling quickly on slow machines--painting for each of the small scroll increments is CPU intensive. My form has roughly fifty UserControls (with multiple fields) positioned one below the other. I’ve tried intercepting OnScroll and UserPaint in order to eliminate some of the unnecessary re-paints for very small scroll events, but the underlying Paint gets called anyway. How can I streamline scrolling on slower machines?

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  • Reading Resource Files from my own APK in Android Native Environment

    - by Kyle
    I'm porting to Android. My existing project has a ton of resource files that I'm porting into my Android project. I have them all in /res/raw/, and I would like to access those resources in my native library with functions such as fopen() and such. Can this be done, or do I have to go through JNI for this as well? I would really prefer not to, for ease of porting and possible speed and memory reasons.

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  • Getting GPU clock speeds with SetupDiEnumDeviceInfo

    - by user157078
    Hi everyone! I posted a question earlier regarding obtaining GPU clock speeds, but I guess the thread appeared as already answered since someone had replied to it. I'd been advised by one of your members to try extracting GPU clock speeds using SetupDiEnumDeviceInfo. However, I looked around at some examples, like this one: http://www.codeproject.com/KB/system/DevMgr.aspx and nothing seemed to be displayed about the clock speed. Could someone please elaborate on how to achieve this, if at all possible? Thanks again

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  • computing hash values, integral types versus struct/class

    - by aaa
    hello I would like to know if there is a difference in speed between computing hash value (for example std::map key) of primitive integral type, such as int64_t and pod type, for example struct { int16_t v[4]; };. I know this is going to implementation specific, so my question ultimately pertains to gnu standard library. Thanks

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  • Index a set of files to search their text quickly?

    - by Ricket
    I have a unique need: I am frequently searching a large set of text files for a keyword. Right now, I open up Notepad++ and use the "Find in files" feature. It works just fine, but with the amount of files, each search takes several minutes to complete. Is there a good program more suited for this purpose, perhaps that indexes a set of files and then lets you search the set repeatedly and very quickly? It would greatly speed up my workflow.

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  • Peformance of f#

    - by Casebash
    What is the performance of f# like in terms of both memory and speed? I am particularly interested in your thoughts about what real world applications are viable. Benchmarks would be particularly relevant.

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  • tools for quick php development

    - by YsoL8
    I'm a PHP developer looking to speed up my production time, and add a new ability to my CV. I'm after a package that provides the basic CMS features that I can build on for a wide range of purposes. I've heard of PHPcake, Drupal ect but I don't know enough about these to make an informed decision. What alternatives are there? Are they OO, MVC, producedual? If you could point me to some comparisons or give your option of which actually work.

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  • do console apps run faster than windows based app?

    - by omair iqbal
    i am reletivly new to world of programming i have a few performance questions 1. do console apps run faster than windows based app? 2.are languages like c and pascal faster than object oriented languages like c++ and delphi?i know language speed depends more on compiler than on language itself but do compilers for prcedural languages like c and pascal produce faster code than oo ones like delphi,c++(including c++ compilers that can procuce c code) sorry for my bad english

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  • Should you use a PHP Framework?

    - by christopher-mccann
    I have asked before about selecting a framework but I have never actually asked should you a framework? In the past I have never used one but I am being drawn more and more to the idea to speed up development time. I am really concerned about the performance of the application though. Does anyone have any views on whether it is a good idea or not to use a framework? The performance of the apps built on top of it will be crucial. Thanks

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  • gif file animation is not working outside the Cycle plugin control

    - by Geetha
    Hi All, I am creating application using jquery in asp.net. I am displaying images(664 x 428) with (eg.) fade effect using cycle plugin and also a gif file outside the control. Problem: The gif file animation is working only if i pause the cycle effect the gif file animation is working. (Whatever effect it may be) Coding: $('#mainBanner').cycle({ fx: 'fade', continuous: true, speed: 7500, timeout: 55000, pause: 1, sync: 1 });

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  • mingw32 Ruby Installer for Windows

    - by srboisvert
    How good is the new Ruby Installer for Windows? I asked before about why Ruby was so slow on windows and now I've seen some impressive benchmarks showing marked speed improvements with the minGW compilation used in the new installers and am curious how it has worked for people who have tried it? How many gems are broken for this version? Any big ones you have been bit by not on this list?

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  • Authoritative sources about Database vs. Flatfile decision

    - by FastAl
    <tldr>looking for a reference to a book or other undeniably authoritative source that gives reasons when you should choose a database vs. when you should choose other storage methods. I have provided an un-authoritative list of reasons about 2/3 of the way down this post.</tldr> I have a situation at my company where a database is being used where it would be better to use another solution (in this case, an auto-generated piece of source code that contains a static lookup table, searched by binary sort). Normally, a database would be an OK solution even though the problem does not require a database, e.g, none of the elements of ACID are needed, as it is read-only data, updated about every 3-5 years (also requiring other sourcecode changes), and fits in memory, and can be keyed into via binary search (a tad faster than db, but speed is not an issue). The problem is that this code runs on our enterprise server, but is shared with several PC platforms (some disconnected, some use a central DB, etc.), and parts of it are managed by multiple programming units, parts by the DBAs, parts even by mathematicians in another department, etc. These hit their own platform’s version of their databases (containing their own copy of the static data). What happens is that every implementation, every little change, something different goes wrong. There are many other issues as well. I can’t even use a flatfile, because one mode of running on our enterprise server does not have permission to read files (only databases, and of course, its own literal storage, e.g., in-source table). Of course, other parts of the system use databases in proper, less obscure manners; there is no problem with those parts. So why don’t we just change it? I don’t have administrative ability to force a change. But I’m affected because sometimes I have to help fix the problems, but mostly because it causes outages and tons of extra IT time by other programmers and d*mmit that makes me mad! The reason neither management, nor the designers of the system, can see the problem is that they propose a solution that won’t work: increase communication; implement more safeguards and standards; etc. But every time, in a different part of the already-pared-down but still multi-step processes, a few different diligent, hard-working, top performing IT personnel make a unique subtle error that causes it to fail, sometimes after the last round of testing! And in general these are not single-person failures, but understandable miscommunications. And communication at our company is actually better than most. People just don't think that's the case because they haven't dug into the matter. However, I have it on very good word from somebody with extensive formal study of sociology and psychology that the relatively small amount of less-than-proper database usage in this gigantic cross-platform multi-source, multi-language project is bureaucratically un-maintainable. Impossible. No chance. At least with Human Beings in the loop, and it can’t be automated. In addition, the management and developers who could change this, though intelligent and capable, don’t understand the rigidity of this ‘how humans are’ issue, and are not convincible on the matter. The reason putting the static data in sourcecode will solve the problem is, although the solution is less sexy than a database, it would function with no technical drawbacks; and since the sharing of sourcecode already works very well, you basically erase any database-related effort from this section of the project, along with all the drawbacks of it that are causing problems. OK, that’s the background, for the curious. I won’t be able to convince management that this is an unfixable sociological problem, and that the real solution is coding around these limits of human nature, just as you would code around a bug in a 3rd party component that you can’t change. So what I have to do is exploit the unsuitableness of the database solution, and not do it using logic, but rather authority. I am aware of many reasons, and posts on this site giving reasons for one over the other; I’m not looking for lists of reasons like these (although you can add a comment if I've miss a doozy): WHY USE A DATABASE? instead of flatfile/other DB vs. file: if you need... Random Read / Transparent search optimization Advanced / varied / customizable Searching and sorting capabilities Transaction/rollback Locks, semaphores Concurrency control / Shared users Security 1-many/m-m is easier Easy modification Scalability Load Balancing Random updates / inserts / deletes Advanced query Administrative control of design, etc. SQL / learning curve Debugging / Logging Centralized / Live Backup capabilities Cached queries / dvlp & cache execution plans Interleaved update/read Referential integrity, avoid redundant/missing/corrupt/out-of-sync data Reporting (from on olap or oltp db) / turnkey generation tools [Disadvantages:] Important to get right the first time - professional design - but only b/c it's meant to last s/w & h/w cost Usu. over a network, speed issue (best vs. best design vs. local=even then a separate process req's marshalling/netwk layers/inter-p comm) indicies and query processing can stand in the way of simple processing (vs. flatfile) WHY USE FLATFILE: If you only need... Sequential Row processing only Limited usage append only (no reading, no master key/update) Only Update the record you're reading (fixed length recs only) Too big to fit into memory If Local disk / read-ahead network connection Portability / small system Email / cut & Paste / store as document by novice - simple format Low design learning curve but high cost later WHY USE IN-MEMORY/TABLE (tables, arrays, etc.): if you need... Processing a single db/ff record that was imported Known size of data Static data if hardcoding the table Narrow, unchanging use (e.g., one program or proc) -includes a class that will be shared, but encapsulates its data manipulation Extreme speed needed / high transaction frequency Random access - but search is dependent on implementation Following are some other posts about the topic: http://stackoverflow.com/questions/1499239/database-vs-flat-text-file-what-are-some-technical-reasons-for-choosing-one-over http://stackoverflow.com/questions/332825/are-flat-file-databases-any-good http://stackoverflow.com/questions/2356851/database-vs-flat-files http://stackoverflow.com/questions/514455/databases-vs-plain-text/514530 What I’d like to know is if anybody could recommend a hard, authoritative source containing these reasons. I’m looking for a paper book I can buy, or a reputable website with whitepapers about the issue (e.g., Microsoft, IBM), not counting the user-generated content on those sites. This will have a greater change to elicit a change that I’m looking for: less wasted programmer time, and more reliable programs. Thanks very much for your help. You win a prize for reading such a large post!

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  • Visual Studio 2010 - References Dialog Filter

    - by Sphynx
    Visual Studio 2010 adds a new feature to improve loading speed of references in "Add .NET Reference" tab. For example, when the target framework of project is 3.5, it displays only 3.5 assemblies in the list, and says "Filtered to: .NET Framework 3.5". This feature is quite annoying, as it makes impossible to find an older assembly, unless you change a target framework in compilation options. Is there any option to disable that filtering?

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