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• Determining cause of high NFS/IO utilization without iotop

  - by Matt

  I have a server that is doing an NFSv4 export for user's home directories. There are roughly 25 users (mostly developers/analysts) and about 40 servers mounting the home directory export. Performance is miserable, with users often seeing multi-second lags for simple commands (like ls, or writing a small text file). Sometimes the home directory mount completely hangs for minutes, with users getting "permission denied" errors. The hardware is a Dell R510 with dual E5620 CPUs and 8 GB RAM. There are eight 15k 2.5” 600 GB drives (Seagate ST3600057SS) configured in hardware RAID-6 with a single hot spare. RAID controller is a Dell PERC H700 w/512MB cache (Linux sees this as a LSI MegaSAS 9260). OS is CentOS 5.6, home directory partition is ext3, with options “rw,data=journal,usrquota”. I have the HW RAID configured to present two virtual disks to the OS: /dev/sda for the OS (boot, root and swap partitions), and /dev/sdb for the home directories. What I find curious, and suspicious, is that the sda device often has very high utilization, even though it only contains the OS. I would expect this virtual drive to be idle almost all the time. The system is not swapping, according to "free" and "vmstat". Why would there be major load on this device? Here is a 30-second snapshot from iostat: Time: 09:37:28 AM Device: rrqm/s wrqm/s r/s w/s rkB/s wkB/s avgrq-sz avgqu-sz await svctm %util sda 0.00 44.09 0.03 107.76 0.13 607.40 11.27 0.89 8.27 7.27 78.35 sda1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 sda2 0.00 44.09 0.03 107.76 0.13 607.40 11.27 0.89 8.27 7.27 78.35 sdb 0.00 2616.53 0.67 157.88 2.80 11098.83 140.04 8.57 54.08 4.21 66.68 sdb1 0.00 2616.53 0.67 157.88 2.80 11098.83 140.04 8.57 54.08 4.21 66.68 dm-0 0.00 0.00 0.03 151.82 0.13 607.26 8.00 1.25 8.23 5.16 78.35 dm-1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 dm-2 0.00 0.00 0.67 2774.84 2.80 11099.37 8.00 474.30 170.89 0.24 66.84 dm-3 0.00 0.00 0.67 2774.84 2.80 11099.37 8.00 474.30 170.89 0.24 66.84 Looks like iotop is the ideal tool to use to sniff out these kinds of issues. But I'm on CentOS 5.6, which doesn't have a new enough kernel to support that program. I looked at Determining which process is causing heavy disk I/O?, and besides iotop, one of the suggestions said to do a "echo 1 /proc/sys/vm/block_dump". I did that (after directing kernel messages to tempfs). In about 13 minutes I had about 700k reads or writes, roughly half from kjournald and the other half from nfsd: # egrep " kernel: .*(READ|WRITE)" messages | wc -l 768439 # egrep " kernel: kjournald.*(READ|WRITE)" messages | wc -l 403615 # egrep " kernel: nfsd.*(READ|WRITE)" messages | wc -l 314028 For what it's worth, for the last hour, utilization has constantly been over 90% for the home directory drive. My 30-second iostat keeps showing output like this: Time: 09:36:30 PM Device: rrqm/s wrqm/s r/s w/s rkB/s wkB/s avgrq-sz avgqu-sz await svctm %util sda 0.00 6.46 0.20 11.33 0.80 71.71 12.58 0.24 20.53 14.37 16.56 sda1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 sda2 0.00 6.46 0.20 11.33 0.80 71.71 12.58 0.24 20.53 14.37 16.56 sdb 137.29 7.00 549.92 3.80 22817.19 43.19 82.57 3.02 5.45 1.74 96.32 sdb1 137.29 7.00 549.92 3.80 22817.19 43.19 82.57 3.02 5.45 1.74 96.32 dm-0 0.00 0.00 0.20 17.76 0.80 71.04 8.00 0.38 21.21 9.22 16.57 dm-1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 dm-2 0.00 0.00 687.47 10.80 22817.19 43.19 65.48 4.62 6.61 1.43 99.81 dm-3 0.00 0.00 687.47 10.80 22817.19 43.19 65.48 4.62 6.61 1.43 99.82

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• How to get rid of a stubborn 'removed' device in mdadm

  - by T.J. Crowder

  One of my server's drives failed and so I removed the failed drive from all three relevant arrays, had the drive swapped out, and then added the new drive to the arrays. Two of the arrays worked perfectly. The third added the drive back as a spare, and there's an odd "removed" entry in the mdadm details. I tried both mdadm /dev/md2 --remove failed and mdadm /dev/md2 --remove detached as suggested here and here, neither of which complained, but neither of which had any effect, either. Does anyone know how I can get rid of that entry and get the drive added back properly? (Ideally without resyncing a third time, I've already had to do it twice and it takes hours. But if that's what it takes, that's what it takes.) The new drive is /dev/sda, the relevant partition is /dev/sda3. Here's the detail on the array: # mdadm --detail /dev/md2 /dev/md2: Version : 0.90 Creation Time : Wed Oct 26 12:27:49 2011 Raid Level : raid1 Array Size : 729952192 (696.14 GiB 747.47 GB) Used Dev Size : 729952192 (696.14 GiB 747.47 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 2 Persistence : Superblock is persistent Update Time : Tue Nov 12 17:48:53 2013 State : clean, degraded Active Devices : 1 Working Devices : 2 Failed Devices : 0 Spare Devices : 1 UUID : 2fdbf68c:d572d905:776c2c25:004bd7b2 (local to host blah) Events : 0.34665 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 19 1 active sync /dev/sdb3 2 8 3 - spare /dev/sda3 If it's relevant, it's a 64-bit server. It normally runs Ubuntu, but right now I'm in the data centre's "rescue" OS, which is Debian 7 (wheezy). The "removed" entry was there the last time I was in Ubuntu (it won't, currently, boot from the disk), so I don't think that's not some Ubuntu/Debian conflict (and they are, of course, closely related). Update: Having done extensive tests with test devices on a local machine, I'm just plain getting anomalous behavior from mdadm with this array. For instance, with /dev/sda3 removed from the array again, I did this: mdadm /dev/md2 --grow --force --raid-devices=1 And that got rid of the "removed" device, leaving me just with /dev/sdb3. Then I nuked /dev/sda3 (wrote a file system to it, so it didn't have the raid fs anymore), then: mdadm /dev/md2 --grow --raid-devices=2 ...which gave me an array with /dev/sdb3 in slot 0 and "removed" in slot 1 as you'd expect. Then mdadm /dev/md2 --add /dev/sda3 ...added it — as a spare again. (Another 3.5 hours down the drain.) So with the rebuilt spare in the array, given that mdadm's man page says RAID-DEVICES CHANGES ... When the number of devices is increased, any hot spares that are present will be activated immediately. ...I grew the array to three devices, to try to activate the "spare": mdadm /dev/md2 --grow --raid-devices=3 What did I get? Two "removed" devices, and the spare. And yet when I do this with a test array, I don't get this behavior. So I nuked /dev/sda3 again, used it to create a brand-new array, and am copying the data from the old array to the new one: rsync -r -t -v --exclude 'lost+found' --progress /mnt/oldarray/* /mnt/newarray This will, of course, take hours. Hopefully when I'm done, I can stop the old array entirely, nuke /dev/sdb3, and add it to the new array. Hopefully, it won't get added as a spare!

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• Windows 2008 Unknown Disks

  - by Ailbe

  I have a BL460c G7 blade server with OS Windows 2008 R2 SP1. This is a brand new C7000 enclosure, with FlexFabric interconnects. I got my FC switches setup and zoned properly to our Clariion CX4, and can see all the hosts that are assigned FCoE HBAs on both paths in both Navisphere and in HP Virtual Connect Manager. So I went ahead and created a storage group for a test server, assigned the appropriate host, assigned the LUN to the server. So far so good, log onto server and I can see 4 unknown disks.... No problem, I install MS MPIO, no luck, can't initialize the disks, and the multiple disks don't go away. Still no problem, I install PowerPath version 5.5 reboot. Now I see 3 disks. One is initialized and ready to go, but I still have 2 disks that I can't initialize, can't offline, can't delete. If I right click in storage manager and go to properties I can see that the MS MPIO tab, but I can't make a path active. I want to get rid of these phantom disks, but so far nothing is working and google searches are showing up some odd results, so obviously I'm not framing my question right. I thought I'd ask here real quick. Does anyone know a quick way to get rid of these unknown disks. Another question, do I need the MPIO feature installed if I have PowerPath installed? This is my first time installing Windows 2008 R2 in this fashion and I'm not sure if that feature is needed or not right now. So some more information to add to this. It seems I'm dealing with more of a Windows issue than anything else. I removed the LUN from the server, uninstalled PowerPath completely, removed the MPIO feature from the server, and rebooted twice. Now I am back to the original 4 Unknown Disks (plus the local Disk 0 containing the OS partition of course, which is working fine) I went to diskpart, I could see all 4 Unknown disks, I selected each disk, ran clean (just in case i'd somehow brought them online previously as GPT and didn't realize it) After a few minutes I was no longer able to see the disks when I ran list disk. However, the disks are still in Disk Management. When I try and offline the disks from Disk Management I get an error: Virtual Disk Manager - The system cannot find the file specified. Accompanied by an error in System Event Logs: Log Name: System Source: Virtual Disk Service Date: 6/25/2012 4:02:01 PM Event ID: 1 Task Category: None Level: Error Keywords: Classic User: N/A Computer: hostname.local Description: Unexpected failure. Error code: 2@02000018 Event Xml: 1 2 0 0x80000000000000 4239 System hostname.local 2@02000018 I feel sure there is a place I can go in the Registry to get rid of these, I just can't recall where and I am loathe to experiement. So to recap, there are currently no LUNS attached at all, I still have the phantom disks, and I'm getting The system cannot find the file specified from Virtual Disk Manager when I try to take them offline. Thanks!

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• Subscript out of range error in VBScript script

  - by user3912

  I'm trying to move my entire User folder in Windows Vista to a non-system partition. To do so with a minimum hassle I'm following the directions provided at Ben's Blog, specifically the VBScript he provides. However executing the script throws up an error which I can't resolve myself. Here's the VBScript code followed by the text file it works from, and finally my error message. How do I correct the problem? VBScript Code: '# Perform dir /a c:\users > c:\dir.txt '# place this script file in c:\ too '# double click to run it '# run resulting script.bat from recovery mode repprefix = " Directory of..." ' Modify to your language sourcedrive = "C:\" targetdrive = "D:\" altsourcedrive = "C:\" 'leave same as target drive unless otherwise indicated alttargetdrive = "E:\" 'leave same as target drive unless otherwise indicated inname = "dir.txt" outname = "script.bat" userroot = "Users" set fso = CreateObject("Scripting.FileSystemObject") ' construct batch commands for saving rights, then link, the recreating rights Function GetCommand(curroot, line, typ, keyword) ' first need to get source and target pos = Instr(line, keyword) + Len(keyword) tuple = Trim(Mid(line, pos)) arr = Split(tuple, "[") oldtarget = Replace(arr(1), "]", "") oldlink = curroot & "\" & Trim(arr(0)) ' need to determine if we are pointing back to old disk newlink = replace(oldlink, sourcedrive, targetdrive) if(Instr(oldtarget, sourcedrive & userroot)) then newtarget = Replace(oldtarget, sourcedrive, targetdrive) else newtarget = oldtarget ' still pointing to original target end if ' comment out = "echo " & newlink & " --- " & newtarget & vbCrLf ' save permissions out = out & "icacls """ & replace(oldlink, sourcedrive, altsourcedrive) & """ /L /save " & altsourcedrive & "permissions.txt" & vbCrLf ' create link newlink = replace(newlink, targetdrive, alttargetdrive) if typ = "junction" then out = out & "mklink /j """ & newlink & """ """ & newtarget & """" & vbCrLf else ' typ = "symlink" out = out & "mklink /d """ & newlink & """ """ & newtarget & """" & vbCrLf end if 'set hidden attribute out = out & "attrib +h """ & newlink & """ /L" & vbCrLf ' apply permissions shortlink = Left(newlink, InstrRev(newlink, "\") - 1) 'icacls works strangely - non-orthogonal for restore out = out & "icacls """ & shortlink & """ /L /restore " & altsourcedrive & "permissions.txt" & vbCrLf GetCommand = out & vbCrLf End Function Sub WriteToFile(file, text) ForWriting = 2 Create = true set outfile = fso.OpenTextFile(file, ForWriting, Create) Call outfile.Write(text) Call outfile.Close() End Sub outtext = "ROBOCOPY " & altsourcedrive & userroot & " " & alttargetdrive & userroot & " /E /COPYALL /XJ" & vbCrLf & vbCrLf set intext = fso.OpenTextFile(inname) while not intext.AtEndOfStream line = intext.ReadLine() if Instr(line, repprefix) then curroot = Replace(line, repprefix, "") elseif Instr(line, juncname) then outtext = outtext & GetCommand(curroot, line, "junction", juncname) elseif Instr(line, linkname) then outtext = outtext & GetCommand(curroot, line, "symlink", linkname) end if Wend outtext = outtext & "icacls " & altsourcedrive & userroot & " /L /save " & altsourcedrive & "permissions.txt" & vbCrLf outtext = outtext & "ren " & altsourcedrive & userroot & " _" & userroot & vbCrLf outtext = outtext & "mklink /j " & altsourcedrive & userroot & " " & targetdrive & userroot & vbCrLf outtext = outtext & "icacls " & altsourcedrive & " /L /restore " & altsourcedrive & "permissions.txt" Call intext.Close() Call WriteToFile(outname, outtext) MsgBox("Done writing to " & outname) dir.txt: Volume in drive C is ACER Volume Serial Number is 08D7-C0CC Directory of c:\users 07/16/2009 12:29 PM {DIR} . 07/16/2009 12:29 PM {DIR} .. 11/02/2006 09:02 AM {SYMLINKD} All Users [C:\ProgramData] 11/02/2006 09:02 AM {DIR} Default 11/02/2006 09:02 AM {JUNCTION} Default User [C:\Users\Default] 08/21/2008 08:37 AM 174 desktop.ini 11/02/2006 08:50 AM {DIR} Public 07/19/2009 08:54 PM {DIR} Steve 1 File(s) 174 bytes 7 Dir(s) 5,679,947,776 bytes free Error Message: Windows Script Host Script: C:\user location.vbs Line: 25 Char: 2 Error: Subscript out of range: '[number: 1]' Code: 800A0009 Source: Microsoft VBScript runtime error (In the VBScript script that I'm using on my system, I believe that 'Line 25' corresponds to the line beginning with oldtarget = Replace(arr(1), "]", "").

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• Subscript out of range error in VBScript script

  - by SteveW

  I'm trying to move my entire User folder in Windows Vista to a non-system partition. To do so with a minimum hassle I'm following the directions provided at Ben's Blog, specifically the VBScript he provides. However executing the script throws up an error which I can't resolve myself. Here's the VBScript code followed by the text file it works from, and finally my error message. How do I correct the problem? VBScript Code: '# Perform dir /a c:\users > c:\dir.txt '# place this script file in c:\ too '# double click to run it '# run resulting script.bat from recovery mode repprefix = " Directory of..." ' Modify to your language sourcedrive = "C:\" targetdrive = "D:\" altsourcedrive = "C:\" 'leave same as target drive unless otherwise indicated alttargetdrive = "E:\" 'leave same as target drive unless otherwise indicated inname = "dir.txt" outname = "script.bat" userroot = "Users" set fso = CreateObject("Scripting.FileSystemObject") ' construct batch commands for saving rights, then link, the recreating rights Function GetCommand(curroot, line, typ, keyword) ' first need to get source and target pos = Instr(line, keyword) + Len(keyword) tuple = Trim(Mid(line, pos)) arr = Split(tuple, "[") oldtarget = Replace(arr(1), "]", "") oldlink = curroot & "\" & Trim(arr(0)) ' need to determine if we are pointing back to old disk newlink = replace(oldlink, sourcedrive, targetdrive) if(Instr(oldtarget, sourcedrive & userroot)) then newtarget = Replace(oldtarget, sourcedrive, targetdrive) else newtarget = oldtarget ' still pointing to original target end if ' comment out = "echo " & newlink & " --- " & newtarget & vbCrLf ' save permissions out = out & "icacls """ & replace(oldlink, sourcedrive, altsourcedrive) & """ /L /save " & altsourcedrive & "permissions.txt" & vbCrLf ' create link newlink = replace(newlink, targetdrive, alttargetdrive) if typ = "junction" then out = out & "mklink /j """ & newlink & """ """ & newtarget & """" & vbCrLf else ' typ = "symlink" out = out & "mklink /d """ & newlink & """ """ & newtarget & """" & vbCrLf end if 'set hidden attribute out = out & "attrib +h """ & newlink & """ /L" & vbCrLf ' apply permissions shortlink = Left(newlink, InstrRev(newlink, "\") - 1) 'icacls works strangely - non-orthogonal for restore out = out & "icacls """ & shortlink & """ /L /restore " & altsourcedrive & "permissions.txt" & vbCrLf GetCommand = out & vbCrLf End Function Sub WriteToFile(file, text) ForWriting = 2 Create = true set outfile = fso.OpenTextFile(file, ForWriting, Create) Call outfile.Write(text) Call outfile.Close() End Sub outtext = "ROBOCOPY " & altsourcedrive & userroot & " " & alttargetdrive & userroot & " /E /COPYALL /XJ" & vbCrLf & vbCrLf set intext = fso.OpenTextFile(inname) while not intext.AtEndOfStream line = intext.ReadLine() if Instr(line, repprefix) then curroot = Replace(line, repprefix, "") elseif Instr(line, juncname) then outtext = outtext & GetCommand(curroot, line, "junction", juncname) elseif Instr(line, linkname) then outtext = outtext & GetCommand(curroot, line, "symlink", linkname) end if Wend outtext = outtext & "icacls " & altsourcedrive & userroot & " /L /save " & altsourcedrive & "permissions.txt" & vbCrLf outtext = outtext & "ren " & altsourcedrive & userroot & " _" & userroot & vbCrLf outtext = outtext & "mklink /j " & altsourcedrive & userroot & " " & targetdrive & userroot & vbCrLf outtext = outtext & "icacls " & altsourcedrive & " /L /restore " & altsourcedrive & "permissions.txt" Call intext.Close() Call WriteToFile(outname, outtext) MsgBox("Done writing to " & outname) dir.txt: Volume in drive C is ACER Volume Serial Number is 08D7-C0CC Directory of c:\users 07/16/2009 12:29 PM {DIR} . 07/16/2009 12:29 PM {DIR} .. 11/02/2006 09:02 AM {SYMLINKD} All Users [C:\ProgramData] 11/02/2006 09:02 AM {DIR} Default 11/02/2006 09:02 AM {JUNCTION} Default User [C:\Users\Default] 08/21/2008 08:37 AM 174 desktop.ini 11/02/2006 08:50 AM {DIR} Public 07/19/2009 08:54 PM {DIR} Steve 1 File(s) 174 bytes 7 Dir(s) 5,679,947,776 bytes free Error Message: Windows Script Host Script: C:\user location.vbs Line: 25 Char: 2 Error: Subscript out of range: '[number: 1]' Code: 800A0009 Source: Microsoft VBScript runtime error (In the VBScript script that I'm using on my system, I believe that 'Line 25' corresponds to the line beginning with oldtarget = Replace(arr(1), "]", "").

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• Java 7 update 6 installation fails on Windows 7 when Chrome is default browser

  - by ali1234

  I am configuring a brand new Lenovo U410 system with Windows 7 Home Premium for a user. I received the system direct from the shop. As part of the configuration I installed Java using the online installer. This worked correctly. Later, due to a mistake I made, I needed to restore the system to factory default. The factory default FORMATS C:\ and puts back (supposedly) the exact factory configuration. However, after doing this, I was no longer able to install Java successfully using the same method I used before. Now, whenever I attempt to use the online Java installer, the following happens. First of all, a window always appears "Welcome to Java", "Downloading Java Installer...". After short time this window disappears and then one of three things happens: The very first time I do this after doing a factory reset, I get a Windows error report, which contains this information: Application Name: JavaSetup7u5.exe Application Version: 7.0.50.6 Application Timestamp: 4feacd84 Fault Module Name: JavaIC.dll Fault Module Version: 9.9.9.9 Fault Module Timestamp: 4f2343d6 Exception Offset: 000052cb Exception Code: c0000417 Exception Data: 00000000 OS Version: 6.1.7600.2.0.0.768.3 Locale ID: 1033 Additional Information 1: 773c Additional Information 2: 773cd78cf06816f8246f359fa270f3bb Additional Information 3: f51a Additional Information 4: f51aaea7d22f36fa9e3a626b5a5cd1c3 2. Subsequent runs produce either this error message: "Error: Java(TM) installer - Downloaded file C:\Users\\AppData\Local\Temp\fx-runtime.exe is corrupt." or Nothing happens at all. I Believe this is a red herring. Running the installer again causes a different error because the files were downloaded and the installer crashed before it could clean up. This isn't the actual problem, as when this happens the installer deletes the downloaded files, and then when you run it for the third time, it downloads everything again and does the javaic.dll crash. I suspect the downloader is appending to the existing files or something, causing the corruption. I have tried all of the above as Administrator and as a normal user. I have tried reseting the system to factory defaults several times. I have tried downloading with Chrome and Internet Explorer 9. I have tried uninstalling all anti-virus software and disabling the windows firewall entirely. The only thing which makes a difference is running the installer in Windows XP compatibility mode, which allows the installation to complete. I know I can workaround this error by using the offline installer so please don't post that as an answer. I am looking for an explanation of the root cause. Additionally, if I use the offline installer, the updater does not work. The updater also does not work if I install in XP mode. The updater fails because it works by just downloading the newest online setup and running it. Also remember that the installers are digitally signed. The signitures verify correctly so there is no way in hell that this is caused by corrupted downloads. Some theories I have: The Java setup files on java.com actually changed in between the first successful install and my later attempts. Seems unlikely as none of the version numbers have changed. However, I have seen a couple of reports of this error which showed up in the past 24 hours. This looks like the most likely explanation right now: http://www.oracle.com/us/corporate/press/1735645 - Oracle released 7 update 6 two days ago. Careful inspection of the installers reveal that they are in fact attempting to download .6, not .5 as the download page claims. Not actually correct. Only the update tool tries to install 7u6. The online installer still tries 7u5. However, 7u6 being released two days ago is too much of a coincidence to ignore. Update: The 7u6 online installer is available from Oracle technetwork. It crashes in exactly the same way. The factory reset software uses GMT-8 and I am on GMT-1. As a result, after factory reset, any software which cares to check would think that the system was restored 7 hours in the future, due to Window's awful policy of storing local time in the system clock. This could be confusing a certificate check or similar. Update: I discovered that this does cause Windows Update to fail. The workaround, setting the clock back before starting factory reset, does not enable Java to install correctly. The factory reset image isn't really the same as what is installed in the main partition when you buy the system. Naughty Lenovo. The installer appears to crash while installing or displaying something to do with the Ask.com toolbar. That seems to be what javaic.dll does. Microsoft Tuesday was the 14th. Some update in that could be causing this. However, I'm factory reseting the machine every time, so unless the patches get slipstreamed into the recovery image, or there is some mechanism by which they get silently installed even if updates are disabled, then I don't see how this can be the cause. Major breakthrough: The default browser on Lenovo systems is Google Chrome. I noticed that the JavaIC.dll "sponsor check" actually does a check on your default browser in order to decide which sponsor ad to display. Normally that would get you the Ask toolbar on IE9. But that toolbar doesn't work on Chrome, and so the installer tries to display a different ad. The different ad is what causes the crash. Changing the default browser to IE9 allows the installer to run correctly. So this looks like a genuine bug in the sponsor ad code in the installer, caused by a combination of Google Chrome default browser and not being in the US. (Installer also checks your location using IP geolocation service and displays different ads based on that.)

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• GRUB-2 Bootloader fails to load for lack of floppy drive. Ubuntu 10.4 & Windows XP

  - by kammer

  2010.07.21 while trying to install Ubuntu 10.4 Hello all, I've been trying to install Ubuntu 10.04 on my Dell workstation and am unable to get the Grub-2 bootloader to load properly. It seems to be failing for lack of a floppy drive on the system resulting in an error message that reads : error: fd0 cannot get C/H/S values. I've gone through the Grub-2 page at https://help.ubuntu.com/community/Grub2 to no avail and other sources having similar problems have likewise turned up no solutions. I would certainly appreciate any insight, here's the background: A while back I was trying to install a different version of Linux and had the same problems, then had to set the project aside for a bit. I don't think this has anything to do with Linux or Ubuntu per se, but rather Grub. The system is an old (4-5 years) Dell workstation that has one drive (128 GB) set up for Windows XP and a second new drive (500GB) which I installed for Linux. There is a DVD/CD drive and the system contains no floppy drive at all. In one attempt to get this working I tried modifying the BIOS to indicate there was a floppy drive - this created a failure earlier in the chain with the BIOS failing to load properly, not unexpected, just a shot in the dark at that point. At the moment I am considering just running out to buy and install a cheap floppy drive to see if that helps. I'll never use the thing though so I'd rather find a solution that doesn't require me to spend money on useless hardware. In any case, here's the /boot/grub/grub.cfg contents: # # DO NOT EDIT THIS FILE # # It is automatically generated by /usr/sbin/grub-mkconfig using templates # from /etc/grub.d and settings from /etc/default/grub # ### BEGIN /etc/grub.d/00_header ### if [ -s $prefix/grubenv ]; then load_env fi set default="0" if [ ${prev_saved_entry} ]; then set saved_entry=${prev_saved_entry} save_env saved_entry set prev_saved_entry= save_env prev_saved_entry set boot_once=true fi function savedefault { if [ -z ${boot_once} ]; then saved_entry=${chosen} save_env saved_entry fi } function recordfail { set recordfail=1 if [ -n ${have_grubenv} ]; then if [ -z ${boot_once} ]; then save_env recordfail; fi; fi } insmod ext2 set root='(hd1,1)' search --no-floppy --fs-uuid --set fbebde47-f488-41b0-9480-337802ecb988 if loadfont /usr/share/grub/unicode.pf2 ; then set gfxmode=640x480 insmod gfxterm insmod vbe if terminal_output gfxterm ; then true ; else # For backward compatibility with versions of terminal.mod that don't # understand terminal_output terminal gfxterm fi fi insmod ext2 set root='(hd1,1)' search --no-floppy --fs-uuid --set fbebde47-f488-41b0-9480-337802ecb988 set locale_dir=($root)/boot/grub/locale set lang=en insmod gettext if [ ${recordfail} = 1 ]; then set timeout=-1 else set timeout=10 fi insmod play play 480 440 1 ### END /etc/grub.d/00_header ### ### BEGIN /etc/grub.d/05_debian_theme ### set menu_color_normal=white/black set menu_color_highlight=black/light-gray ### END /etc/grub.d/05_debian_theme ### ### BEGIN /etc/grub.d/10_linux ### menuentry 'Ubuntu, with Linux 2.6.32-21-generic' --class ubuntu --class gnu-linux --class gnu --class os { recordfail insmod ext2 set root='(hd1,1)' search --no-floppy --fs-uuid --set fbebde47-f488-41b0-9480-337802ecb988 linux /boot/vmlinuz-2.6.32-21-generic root=UUID=fbebde47-f488-41b0-9480-337802ecb988 ro quiet splash initrd /boot/initrd.img-2.6.32-21-generic } menuentry 'Ubuntu, with Linux 2.6.32-21-generic (recovery mode)' --class ubuntu --class gnu-linux --class gnu --class os { recordfail insmod ext2 set root='(hd1,1)' search --no-floppy --fs-uuid --set fbebde47-f488-41b0-9480-337802ecb988 echo 'Loading Linux 2.6.32-21-generic ...' linux /boot/vmlinuz-2.6.32-21-generic root=UUID=fbebde47-f488-41b0-9480-337802ecb988 ro single echo 'Loading initial ramdisk ...' initrd /boot/initrd.img-2.6.32-21-generic } ### END /etc/grub.d/10_linux ### ### BEGIN /etc/grub.d/20_memtest86+ ### menuentry "Memory test (memtest86+)" { insmod ext2 set root='(hd1,1)' search --no-floppy --fs-uuid --set fbebde47-f488-41b0-9480-337802ecb988 linux16 /boot/memtest86+.bin } menuentry "Memory test (memtest86+, serial console 115200)" { insmod ext2 set root='(hd1,1)' search --no-floppy --fs-uuid --set fbebde47-f488-41b0-9480-337802ecb988 linux16 /boot/memtest86+.bin console=ttyS0,115200n8 } ### END /etc/grub.d/20_memtest86+ ### ### BEGIN /etc/grub.d/30_os-prober ### menuentry "Microsoft Windows XP Home Edition (on /dev/sda1)" { insmod ntfs set root='(hd0,1)' search --no-floppy --fs-uuid --set 6ef0d4b4f0d4842d drivemap -s (hd0) ${root} chainloader +1 } ### END /etc/grub.d/30_os-prober ### ### BEGIN /etc/grub.d/40_custom ### # This file provides an easy way to add custom menu entries. Simply type the # menu entries you want to add after this comment. Be careful not to change # the 'exec tail' line above. ### END /etc/grub.d/40_custom ### Thoughts anyone? Thanks in advance.

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• Motherboard/PSU crippling USB and Sata

  - by celebdor

  I very recently bought a new desktop computer. The motherboard is: Z77MX-D3H and the power supply is ocz zs series 550w. The issue I have is that once I boot to the operating system (I have tried with fedora and Ubuntu with kernels 2.6.38 - 3.4.0), my hard drive (2.5" Magnetic) occasionally makes a power switch noise and it resets. Needless to say, when this drive is the OS drive, the OS crashes. I also have a SSD that works fine with the same OS configurations, but if I have the magnetic hard drive attached as second drive, it works erratically and the reconnects result in corrupted data. I also noticed that whenever I plug an external hard drive USB2.0 or USB3.0 to the computer the issue with the reconnects is even worse: [ 52.198441] sd 7:0:0:0: [sdc] Spinning up disk... [ 57.955811] usb 4-3: USB disconnect, device number 3 [ 58.023687] .ready [ 58.023914] sd 7:0:0:0: [sdc] READ CAPACITY(16) failed [ 58.023919] sd 7:0:0:0: [sdc] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK [ 58.023932] sd 7:0:0:0: [sdc] Sense not available. [ 58.024061] sd 7:0:0:0: [sdc] READ CAPACITY failed [ 58.024063] sd 7:0:0:0: [sdc] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK [ 58.024064] sd 7:0:0:0: [sdc] Sense not available. [ 58.024099] sd 7:0:0:0: [sdc] Write Protect is off [ 58.024101] sd 7:0:0:0: [sdc] Mode Sense: 00 00 00 00 [ 58.024135] sd 7:0:0:0: [sdc] Asking for cache data failed [ 58.024137] sd 7:0:0:0: [sdc] Assuming drive cache: write through [ 58.024400] sd 7:0:0:0: [sdc] READ CAPACITY(16) failed [ 58.024402] sd 7:0:0:0: [sdc] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK [ 58.024405] sd 7:0:0:0: [sdc] Sense not available. [ 58.024448] sd 7:0:0:0: [sdc] READ CAPACITY failed [ 58.024450] sd 7:0:0:0: [sdc] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK [ 58.024451] sd 7:0:0:0: [sdc] Sense not available. [ 58.024469] sd 7:0:0:0: [sdc] Asking for cache data failed [ 58.024471] sd 7:0:0:0: [sdc] Assuming drive cache: write through [ 58.024472] sd 7:0:0:0: [sdc] Attached SCSI disk [ 58.407725] usb 4-3: new SuperSpeed USB device number 4 using xhci_hcd [ 58.424921] scsi8 : usb-storage 4-3:1.0 [ 59.424185] scsi 8:0:0:0: Direct-Access WD My Passport 0740 1003 PQ: 0 ANSI: 6 [ 59.424406] scsi 8:0:0:1: Enclosure WD SES Device 1003 PQ: 0 ANSI: 6 [ 59.425098] sd 8:0:0:0: Attached scsi generic sg2 type 0 [ 59.425176] ses 8:0:0:1: Attached Enclosure device [ 59.425248] ses 8:0:0:1: Attached scsi generic sg3 type 13 [ 61.845836] sd 8:0:0:0: [sdc] 976707584 512-byte logical blocks: (500 GB/465 GiB) [ 61.845838] sd 8:0:0:0: [sdc] 4096-byte physical blocks [ 61.846336] sd 8:0:0:0: [sdc] Write Protect is off [ 61.846338] sd 8:0:0:0: [sdc] Mode Sense: 47 00 10 08 [ 61.846718] sd 8:0:0:0: [sdc] No Caching mode page present [ 61.846720] sd 8:0:0:0: [sdc] Assuming drive cache: write through [ 61.848105] sd 8:0:0:0: [sdc] No Caching mode page present [ 61.848106] sd 8:0:0:0: [sdc] Assuming drive cache: write through [ 61.857147] sdc: sdc1 [ 61.858915] sd 8:0:0:0: [sdc] No Caching mode page present [ 61.858916] sd 8:0:0:0: [sdc] Assuming drive cache: write through [ 61.858918] sd 8:0:0:0: [sdc] Attached SCSI disk [ 69.875809] usb 4-3: USB disconnect, device number 4 [ 70.275816] usb 4-3: new SuperSpeed USB device number 5 using xhci_hcd [ 70.293063] scsi9 : usb-storage 4-3:1.0 [ 71.292257] scsi 9:0:0:0: Direct-Access WD My Passport 0740 1003 PQ: 0 ANSI: 6 [ 71.292505] scsi 9:0:0:1: Enclosure WD SES Device 1003 PQ: 0 ANSI: 6 [ 71.293527] sd 9:0:0:0: Attached scsi generic sg2 type 0 [ 71.293668] ses 9:0:0:1: Attached Enclosure device [ 71.293758] ses 9:0:0:1: Attached scsi generic sg3 type 13 [ 73.323804] usb 4-3: USB disconnect, device number 5 [ 101.868078] ses 9:0:0:1: Device offlined - not ready after error recovery [ 101.868124] ses 9:0:0:1: Failed to get diagnostic page 0x50000 [ 101.868131] ses 9:0:0:1: Failed to bind enclosure -19 [ 101.868288] sd 9:0:0:0: [sdc] READ CAPACITY(16) failed [ 101.868292] sd 9:0:0:0: [sdc] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK [ 101.868296] sd 9:0:0:0: [sdc] Sense not available. [ 101.868428] sd 9:0:0:0: [sdc] READ CAPACITY failed [ 101.868434] sd 9:0:0:0: [sdc] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK [ 101.868439] sd 9:0:0:0: [sdc] Sense not available. [ 101.868468] sd 9:0:0:0: [sdc] Write Protect is off [ 101.868473] sd 9:0:0:0: [sdc] Mode Sense: 00 00 00 00 [ 101.868580] sd 9:0:0:0: [sdc] Asking for cache data failed [ 101.868584] sd 9:0:0:0: [sdc] Assuming drive cache: write through [ 101.868845] sd 9:0:0:0: [sdc] READ CAPACITY(16) failed [ 101.868849] sd 9:0:0:0: [sdc] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK [ 101.868854] sd 9:0:0:0: [sdc] Sense not available. [ 101.868894] sd 9:0:0:0: [sdc] READ CAPACITY failed [ 101.868898] sd 9:0:0:0: [sdc] Result: hostbyte=DID_NO_CONNECT driverbyte=DRIVER_OK [ 101.868903] sd 9:0:0:0: [sdc] Sense not available. [ 101.868961] sd 9:0:0:0: [sdc] Asking for cache data failed [ 101.868966] sd 9:0:0:0: [sdc] Assuming drive cache: write through [ 101.868969] sd 9:0:0:0: [sdc] Attached SCSI disk Now, if I plug the same drive to the powered usb 2.0 hub of my monitor, the issue is not reproduced (at least on a 20h long operation). Also the issue of the usb reconnects is less frequent if the hard drive is plugged before I switch on the computer. Does anybody have some advice as to what I could do? Which is the faulty part/s that I should replace? As for me, I really don't know if to point my finger to the PSU or the Motherboard (I have updated to the latest firmware and checked the BIOS settings several times). EDIT: The reconnects are happening both in the Sata connected drives and the USBX connected drives.

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• apache webserver unresponsible with server-status showing all child processes waiting for connection

  - by Jeff

  My setup: i have 3 nearly identical webserver machines serving the same high loaded dynamic website with simple load balancing over dns. The service has been working for over two ears with the same apache config. apache2, php5, ubuntu 8.04 linux 2.6.24-29-server My problem: since about two weeks i'm experiencing problems with this config. Nearly every day i have one small moment about 5 minutes, in which the website is unreachable. I'm still able to login to the servers over ssh. If i run htop, i see the machine simply doing nothing. i have about 1000 apache processes running, but no cpu activity. i've used the apache mod_status to debug this situation. the process scoreboard looks like this: _C.___K_______________________R._______.__K_K____K___C_______.__ _______C__________.___________________________________.________C _.____K__________K___K_WK_____._K_____________________________._ W______K__________K________.____________________._______C_______ _C_.__K__K____.._.._____________________________________C_______ _R___________K___.______C________.C_________.______._____C______ ____________KKC____K_____K__WC_________________C_____.__.____.__ _____________________C_________K______.____C______._____________ _.___C____.___.___________________________.K______.____K________ W__.___________________C.__.____K________K_______R_._.__._______ __C__C_.__________C__C_______._____W______________C_.___C_______ ____.______C_____________C________.____C____________.________._K __.__________.K_____________K_________._____C____.K__________KW_ __K.W________R_________._______.___W___________.____.__K_____W__ W___.___..________W____K Scoreboard Key: "_" Waiting for Connection, "S" Starting up, "R" Reading Request, "W" Sending Reply, "K" Keepalive (read), "D" DNS Lookup, "C" Closing connection, "L" Logging, "G" Gracefully finishing, "I" Idle cleanup of worker, "." Open slot with no current process So the most of the processes are just waiting for connection. after about 5 minutes the situation will return to normal: i have lot least processes on every machine, the most workers have the "."-status (meaing they are open to process a request) and of course the website is reachable! so i'm trying to find something in the logs, but there is simply nothing... the apache access log is silent for about 4 minutes, the same is for the error log. i also can not figure out anything wrong in other system logs. the situation is the same on all 3 webservers (all of them have this load peak and unresposibility at the same time), so i do not thing this is hardware related. but i think, this might be related to some network (tcp) issue. any ideas? EDIT: some more information, that i have just discovered: it has just happened again. and i was able to verify that i'm also not able to connect locally when this problem occurs. i have made some connection statistics with the following command after it happend netstat -an|awk '/tcp/ {print $6}'|sort|uniq -c 109 CLOSE_WAIT 2652 ESTABLISHED 2 FIN_WAIT1 11 LAST_ACK 12 LISTEN 91 SYN_RECV 1 SYN_SENT 16 TIME_WAIT If i execute the same command some time later, i have something like this: 4 CLOSING 108 ESTABLISHED 18 FIN_WAIT1 182 FIN_WAIT2 37 LAST_ACK 12 LISTEN 50 SYN_RECV 11276 TIME_WAIT So in the normal situation i have only 100-200 open connections by clients beeing handled by apache in this moment. when i have this "crash", i have a lot more connections. what is the best way to analyse this? EDIT2: the important lines in apache2.conf are: KeepAlive On MaxKeepAliveRequests 20 KeepAliveTimeout 1 <IfModule mpm_prefork_module> ServerLimit 920 StartServers 30 MinSpareServers 80 MaxSpareServers 120 MaxClients 920 MaxRequestsPerChild 700 </IfModule> it is an apache2 prefork with php_mod. the server has 8GB ram and a 4gb swap partition.

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• Mac won't boot into safe mode

  - by Stephen

  Mac boots fine normally, except when in safe mode. Holding down shift when booting gets me to the progress bar on the grey screen. Progress bar gets about half way before mac reboots. I modified nvram boot-args to get a better look: sudo nvram boot-args="-x -v" It definitely gets through fsck, skips loading kernel extensions (since it's in safe mode), does something with the network interfaces, then this is the last thing it wips through... Aug 22 11:56:21 Crockpot com.apple.SecurityServer[15]: Succeeded authorizing right 'com.apple.ServiceManagement.daemons.modify' by client '/usr/libexec/UserEventAgent' [10] for authorization created by '/usr/libexec/UserEventAgent' [10] (100012,0) Aug 22 11:56:22 Crockpot fseventsd[37]: event logs in /.fseventsd out of sync with volume. destroying old logs. (1 174 330) Aug 22 11:56:22 Crockpot fseventsd[37]: log dir: /.fseventsd getting new uuid: 5C379650-26FA-428F-B81F-4FE4349D50B3 Aug 22 11:56:23 Crockpot mDNSResponder[39]: mDNSResponder mDNSResponder-379.27 (Jun 20 2012 15:40:55) starting OSXVers 12 Aug 22 11:56:23 Crockpot systemkeychain[35]: done file: /var/run/systemkeychaincheck.done Aug 22 11:56:23 Crockpot configd[17]: network changed: DNS* Aug 22 11:56:24 --- last message repeated 1 time --- Aug 22 11:56:24 Crockpot mDNSResponder[39]: D2D_IPC: Loaded Aug 22 11:56:24 Crockpot mDNSResponder[39]: D2DInitialize succeeded Aug 22 11:56:24 Crockpot mDNSResponder[39]: Adding registration domain 273025955.members.btmm.icloud.com. Aug 22 11:56:24 Crockpot kernel[0]: MacAuthEvent en1 Auth result for: 00:23:69:35:dc:fe MAC AUTH succeeded Aug 22 11:56:24 Crockpot kernel[0]: MacAuthEvent en1 Auth result for: 00:23:69:35:dc:fe Unsolicited Auth Aug 22 11:56:24 Crockpot kernel[0]: wlEvent: en1 en1 Link UP virtIf = 0 Aug 22 11:56:24 Crockpot kernel[0]: AirPort: Link Up on en1 Aug 22 11:56:24 Crockpot kernel[0]: en1: BSSID changed to 00:23:69:35:dc:fe Aug 22 11:56:24 Crockpot kernel[0]: en1::IO80211Interface::postMessage bssid changed Aug 22 11:56:24 Crockpot kernel[0]: AirPort: RSN handshake complete on en1 Aug 22 11:56:25 Crockpot cfprefsd[19]: CFPreferences failed to read preferences data. Errno was 21 Aug 22 11:56:25 --- last message repeated 1 time --- Aug 22 11:56:25 Crockpot airportd[30]: _doAutoJoin: Already associated to “burnum”. Bailing on auto-join. Aug 22 11:56:25 Crockpot com.apple.kextd[11]: Can't load IOBluetoothSerialManager.kext - ineligible during safe boot. Aug 22 11:56:25 Crockpot com.apple.kextd[11]: Load com.apple.iokit.IOBluetoothSerialManager failed; removing personalities from kernel. Aug 22 11:56:25 Crockpot cfprefsd[19]: CFPreferences: error renaming file blued.plist.HXuEmQn to blued.plist. Aug 22 11:56:27 Crockpot awacsd[52]: Starting awacsd connectivity-77 (Jun 20 2012 15:40:49) Aug 22 11:56:27 Crockpot com.apple.SecurityServer[15]: Succeeded authorizing right 'system.services.systemconfiguration.network' by client '/System/Library/Frameworks/SystemConfiguration.framework/Versions/A/Resources/SCHelper' [54] for authorization created by '/usr/sbin/awacsd' [52] (100003,0) Aug 22 11:56:27 --- last message repeated 1 time --- Aug 22 11:56:27 Crockpot awacsd[52]: Configuring lazy AWACS client: 273025955.p04.members.btmm.icloud.com. Aug 22 11:56:28 Crockpot apsd[55]: CGSLookupServerRootPort: Failed to look up the port for "com.apple.windowserver.active" (1102) Aug 22 11:56:32 --- last message repeated 1 time --- Aug 22 11:56:32 Crockpot awacsd[52]: KV HTTP 0 Aug 22 11:56:38 --- last message repeated 1 time --- Aug 22 11:56:38 Crockpot apsd[55]: CGSLookupServerRootPort: Failed to look up the port for "com.apple.windowserver.active" (1102) Aug 22 11:56:47 Crockpot awacsd[52]: KV HTTP 0 Aug 22 11:56:49 Crockpot configd[17]: subnet_route: write routing socket failed, Network is unreachable Aug 22 11:56:51 Crockpot configd[17]: network changed: v4(en1+:169.254.80.161) DNS* Proxy+ SMB Aug 22 11:56:51 Crockpot UserEventAgent[10]: Captive: en1: Not probing 'burnum' (protected network) Aug 22 11:56:51 Crockpot configd[17]: network changed: v4(en1:169.254.80.161) DNS Proxy SMB Aug 22 11:57:07 Crockpot awacsd[52]: KV HTTP 0 Aug 22 11:57:23 Crockpot fseventsd[37]: Logging disabled completely for device:1: /Volumes/Recovery HD Aug 22 11:57:25 Crockpot kernel[0]: Kext loading now disabled. Aug 22 11:57:25 Crockpot kernel[0]: Kext unloading now disabled. Aug 22 11:57:25 Crockpot mDNSResponder[39]: mDNSResponder mDNSResponder-379.27 (Jun 20 2012 15:40:55) stopping Aug 22 11:57:25 Crockpot com.apple.SecurityServer[15]: Killing auth hosts Aug 22 11:57:25 Crockpot UserEventAgent[10]: dnssd_clientstub DNSServiceProcessResult called with DNSServiceRef with no ProcessReply function Aug 22 11:57:25 Crockpot configd[17]: dnssd_clientstub read_all(26) failed 0/28 0 Aug 22 11:57:25 Crockpot configd[17]: [0x7fb025119ff0] SCNetworkReachability _llq_callback w/error=-65563 Aug 22 11:57:25 Crockpot UserEventAgent[10]: dnssd_clientstub DNSServiceProcessResult called with DNSServiceRef with no ProcessReply function Aug 22 11:57:25 Crockpot mDNSResponder[39]: D2D_IPC: Terminated Aug 22 11:57:25 Crockpot mDNSResponder[39]: D2DTerminate succeeded Aug 22 11:57:25 Crockpot awacsd[52]: dnssd_clientstub read_all(4) failed 0/28 0 Aug 22 11:57:25 Crockpot UserEventAgent[10]: dnssd_clientstub DNSServiceProcessResult called with DNSServiceRef with no ProcessReply function Aug 22 11:57:25 --- last message repeated 2 times --- Aug 22 11:57:25 Crockpot apsd[55]: dnssd_clientstub read_all(4) failed 0/28 0 Aug 22 11:57:25 Crockpot configd[17]: SCNC: stop, triggered by configd, type PPPSerial, reason Terminated All Aug 22 11:57:25 Crockpot configd[17]: _d2dCallback: D2D connection to mDNSResponder lost Aug 22 11:57:25 Crockpot UserEventAgent[10]: dnssd_clientstub DNSServiceProcessResult called with DNSServiceRef with no ProcessReply function Aug 22 11:57:25 --- last message repeated 4 times --- Aug 22 11:57:25 Crockpot kernel[0]: Kext autounloading now disabled. Aug 22 11:57:25 Crockpot kernel[0]: Kernel requests now disabled. ... before rebooting in the middle of the safe mode startup sequence. Aug 22 12:01:10 localhost bootlog[0]: BOOT_TIME 1345662070 0 Aug 22 12:01:32 localhost kernel[0]: PMAP: PCID enabled Aug 22 12:01:32 localhost kernel[0]: Darwin Kernel Version 12.0.0: Sun Jun 24 23:00:16 PDT 2012; root:xnu-2050.7.9~1/RELEASE_X86_64 Any ideas what's causing the safe mode boot to fail? System Info MacBook Pro 8,2 2.2 Ghz Core i7 4 GM Ram Mountain Lion 10.8 500GB TOSHIBA MK5065GSXF Serial-ATA rotational disk

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• Causes of sudden massive filesystem damage? ("root inode is not a directory")

  - by poolie

  I have a laptop running Maverick (very happily until yesterday), with a Patriot Torx SSD; LUKS encryption of the whole partition; one lvm physical volume on top of that; then home and root in ext4 logical volumes on top of that. When I tried to boot it yesterday, it complained that it couldn't mount the root filesystem. Running fsck, basically every inode seems to be wrong. Both home and root filesystems show similar problems. Checking a backup superblock doesn't help. e2fsck 1.41.12 (17-May-2010) lithe_root was not cleanly unmounted, check forced. Resize inode not valid. Recreate? no Pass 1: Checking inodes, blocks, and sizes Root inode is not a directory. Clear? no Root inode has dtime set (probably due to old mke2fs). Fix? no Inode 2 is in use, but has dtime set. Fix? no Inode 2 has a extra size (4730) which is invalid Fix? no Inode 2 has compression flag set on filesystem without compression support. Clear? no Inode 2 has INDEX_FL flag set but is not a directory. Clear HTree index? no HTREE directory inode 2 has an invalid root node. Clear HTree index? no Inode 2, i_size is 9581392125871137995, should be 0. Fix? no Inode 2, i_blocks is 40456527802719, should be 0. Fix? no Reserved inode 3 (<The ACL index inode>) has invalid mode. Clear? no Inode 3 has compression flag set on filesystem without compression support. Clear? no Inode 3 has INDEX_FL flag set but is not a directory. Clear HTree index? no .... Running strings across the filesystems, I can see there are what look like filenames and user data there. I do have sufficiently good backups (touch wood) that it's not worth grovelling around to pull back individual files, though I might save an image of the unencrypted disk before I rebuild, just in case. smartctl doesn't show any errors, neither does the kernel log. Running a write-mode badblocks across the swap lv doesn't find problems either. So the disk may be failing, but not in an obvious way. At this point I'm basically, as they say, fscked? Back to reinstalling, perhaps running badblocks over the disk, then restoring from backup? There doesn't even seem to be enough data to file a meaningful bug... I don't recall that this machine crashed last time I used it. At this point I suspect a bug or memory corruption caused it to write garbage across the disks when it was last running, or some kind of subtle failure mode for the SSD. What do you think would have caused this? Is there anything else you'd try?

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• How to use more than 3 virtual disks in Linux using CentOS and XenServer

  - by 010110110101

  I've attached 5 virtual disks to a Virtual Machine in Citrix XenServer. The VM has the xs-tools installed. Initially it said that it couldn't add so many disks. After I installed the xs-tools, it let me add all the disks. But /dev doesn't show all the disks. It shows these: /dev/xvda /dev/xvdb /dev/xvdc /dev/cdrom Perhaps it is bound by the limits of an IDE bus? (3 disks + CD-ROM) If so, how does one change the VM to use SCSI? Edit: According to the documentation: 2.6.3. VM Block Devices In the PV Linux case, block devices are passed through as PV devices. XenServer does not attempt to emulate SCSI or IDE, but instead provides a more suitable interface in the virtual environment in the form of xvd* devices. It is also possible to get an sd* device using the same mechanism, where the PV driver inside the VM takes over the SCSI device namespace. This is not desirable so it is best to use xvd* where possible for PV guests (this is the default for Debian and RHEL). For Windows or other fully virtualized guests, XenServer emulates an IDE bus in the form of an hd* device. When using Windows, installing the Citrix Tools for Virtual Machines installs a special PV driver that works in a similar way to Linux, except in the fully virtualized environment. Still, with 5 virtual disks attached, I don't see the other xvd devices. Edit #2: (attached requested info) Host Machine: XenServer 6.1 Linux version 2.6.32.43-0.4.1.xs1.6.10.777.170770xen (geeko@buildhost) (gcc version 4.1.2 20080704 (Red Hat 4.1.2-51)) #1 SMP Wed Apr 17 05:52:03 EDT 2013 Guest Machine: CentOS release 6.4 (Final) Linux version 2.6.32-358.6.2.el6.x86_64 ([email protected]) (gcc version 4.4.7 20120313 (Red Hat 4.4.7-3) (GCC) ) #1 SMP Thu May 16 20:59:36 UTC 2013 Output of 'fdisk -l' on Guest Machine: Note, the disk beyond the first 3 attached are not displaying -- there should be 4 100GB disks. (There are a total of 5 disks displayed in XenCenter -- 16GB, 100GB, 100GB, 100GB, 100GB) Disk /dev/xvdb: 107.4 GB, 107374182400 bytes 255 heads, 63 sectors/track, 13054 cylinders Units = cylinders of 16065 * 512 = 8225280 bytes Sector size (logical/physical): 512 bytes / 512 bytes I/O size (minimum/optimal): 512 bytes / 512 bytes Disk identifier: 0xfb6c95b9 Device Boot Start End Blocks Id System /dev/xvdb1 1 13054 104856223+ 83 Linux Disk /dev/xvda: 17.2 GB, 17179869184 bytes 255 heads, 63 sectors/track, 2088 cylinders Units = cylinders of 16065 * 512 = 8225280 bytes Sector size (logical/physical): 512 bytes / 512 bytes I/O size (minimum/optimal): 512 bytes / 512 bytes Disk identifier: 0x000e5f41 Device Boot Start End Blocks Id System /dev/xvda1 * 1 64 512000 83 Linux Partition 1 does not end on cylinder boundary. /dev/xvda2 64 2089 16264192 8e Linux LVM Disk /dev/xvdc: 107.4 GB, 107374182400 bytes 255 heads, 63 sectors/track, 13054 cylinders Units = cylinders of 16065 * 512 = 8225280 bytes Sector size (logical/physical): 512 bytes / 512 bytes I/O size (minimum/optimal): 512 bytes / 512 bytes Disk identifier: 0xed249ced Device Boot Start End Blocks Id System /dev/xvdc1 1 13054 104856223+ 83 Linux Disk /dev/mapper/vg_blue-lv_root: 14.6 GB, 14571012096 bytes 255 heads, 63 sectors/track, 1771 cylinders Units = cylinders of 16065 * 512 = 8225280 bytes Sector size (logical/physical): 512 bytes / 512 bytes I/O size (minimum/optimal): 512 bytes / 512 bytes Disk identifier: 0x00000000 Disk /dev/mapper/vg_blue-lv_swap: 2080 MB, 2080374784 bytes 255 heads, 63 sectors/track, 252 cylinders Units = cylinders of 16065 * 512 = 8225280 bytes Sector size (logical/physical): 512 bytes / 512 bytes I/O size (minimum/optimal): 512 bytes / 512 bytes Disk identifier: 0x00000000 I see that the Linux versions say SMP. The Guest VM doesn't say "xen" in the name. However, I have already run yum install kernel-xen. Could be a clue?

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• How to delete files and folders that cannot be deleted?

  - by glenneroo

  I have a backup copy of a previous Windows' Documents and Settings folder which only contains my original user and within 2 more directories: Favorites and Local Settings. When I try to delete Local Settings I get this error: When I try to delete Favorites, I get this error: I ran this in a cmd shell: attrib *.* -r -a -s -h /s ...but it did not help, nor did it return any errors/warnings. I used Unlocker v1.8.5 and LockHunter repeatedly at multiple levels to see if any files are in use, but both always say: No Files Locked. Update #1: I was able to rename the directory, which now gives me this warning before (trying to) delete: If I press Yes (or Yes to All) then I get this error: Update #2: I let chkdsk /f run which required a reboot since it's on my primary system partition. During Stage 2 scanning, I received about 40 of these: Deleting an index entry from index $0 of file 25. ...followed by: Deleting index entry cookies in index $I30 of file 37576. ...but I still get the first error dialog above when trying to delete. I ran chkdsk again, this time: chkdsk /f /r. Produced no messages. Same result when deleting. Update #3: Digging deeper, the 99 is the name of one of many directories located deep in here: C:\Documents and Settings.OLD\User\Local Settings\Application Data\Microsoft\Messenger\[email protected]\SharingMetadata\[email protected]\DFSR\Staging\CS{D4E4AE55-B5E2-F03B-5189-6C4DA6E41788}\ Inside each of those directories were files with names such as: 2300-{C93D01AC-0739-4FD9-88C7-13D2F21A208E}-v2300-{C93D01AC-0739-4FD9-88C7-13D2F21A208E}-v2300-Downloaded.frx I noticed that, unlike all the directories, I couldn't rename any of these files. I also noticed that the file + dir names were extremely long: Original directory = 194 characters Filenames = 100+ characters Together the length exceeds the 255-char limit which is bad and would explain the error message I posted in Update #1. Partial Solution: Rename all directories until the total path length is less than 100. Afterwards I was able to rename the .frx files, not to mention delete everything inside the Local Settings directory. This is only a partial solution because these (empty) directories are still not deleteable, C:\1\2\Favorites\Wien\What To Do.. C:\1\2\Favorites\Photography\FIRE Same error as above: Here is what Explorer properties shows for both folders: Update #4 (another partial solution): Using harrymc's answer combined with thoroughly reading through this amazing MS-KB article which contains nearly everyone's idea and then some, inconspicuously titled: You cannot delete a file or a folder on an NTFS file system volume. I was able to delete the 2nd folder C:\1\2\Favorites\Photography\FIRE - the problem being that there was an invisible trailing space at the end. I got lucky when I did an auto-complete whilst playing around with the del "\\?\<path>" command which he suggested. NOTE: A normal del did NOT work, nor did deleting from explorer. Now all that is left is the first directory C:\1\2\Favorites\Wien\What To Do.. (yes I tried endlessly with multiple combinations of the above solution ;) Keep 'em coming! =)

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• Using different SSDs types (not only SATA based) as system drive

  - by Hubert Kario

  Currently I have a Thinkpad X61s and want to make it both a bit faster and a bit more power efficient. For that reason I thought that adding SSD drive would make most sense. Unfortunately, because of financial reasons, buying SSD of over 200GB capacity is out of reach for me (not only it would be worth more than the rest of the laptop, but also I currently have a 500GB drive in it, so even such a drive would be kind of a downgrade for me). During preliminary testing with a cheap Transcend 4GB Class 6 (14MiB/s streaming, 9MiB/s random read) card I experienced boot times to be reduced by half so putting the OS only on it would already would be an improvement. Unfortunately, my system now is about 11GiB in size so anything less than 16GB would be constraining. In this laptop I can connect additional drives on at least 5 different ways: using SATA-ATA converter caddy in the X6 Ultrabase using internal mini PCIe slot using integrated SDHC slot using CardBus (a.k.a PCMCIA or PC Card) slot using USB Thankfully, because I use only Linux on this PC the bootability of them is irrelevant as I can put the /boot partition on internal HDD and / on any of the above mentioned Flash memories (as I already did for the SDHC test). From what I was able to research and from my own experience those options come with rather big downsides or other problems: SATA-ATA caddy It has three downsides: I have to carry the Ultrabse with me at all times (it's not really inconvenient, but those grams do add) and couldn't disconnect it when I want to disconnect the battery It makes the bay unusable for the optical drive and occasional quick access to other hard drives the only caddies I could buy have rather flaky controllers in them so putting my OS on it would hamper its stability Internal mini PCIe slot This would be an ideal solution, if only I could find real PCIe SSDs, not only devices that could talk only SATA or ATA over PCIe mechanical connection (the ones used in Dell Mini or Asus EEE). Theoretically Samsung did release such devices but I couldn't find them in retail anywhere. Integrated SDHC slot It's a nice solution with a single drawback: the fastest 16GB SDHC card on the market can only do around 35MiB/s read and 15MiB/s write while still costing like a normal 40GB SATA SSD that's 10 times faster. Not really cost-effective. CardBus (a.k.a PCMCIA or PC Card) slot Those cards are much faster than the SDHC option (there are ones that can do well over 50MiB/s read in benchmarks) and from what I could find the PCMCIA controller in my laptop does support UDMA so it should be able to deliver comparable speeds. They still cost similarly to SD cards but at least they provide streaming performance comparable to my current HDD. USB That's the worst option. Not only is it limited to 20-30MiB/s by the interface itself the drive would stick out of the laptop so it's a big no no. The question As such I think that going the "CF in a CardBus adapter" route will be the best option. My question is: did anyone try using CF cards in CardBus adapters as system drives with Linux on Thinkpad laptops? Laptops in general? What was the real-world performance? I don't have any CF cards so I can't check how well does it work with suspend/resume, or whatever it's easy to make it work in initramfs (I'm using ArchLinux and SD card was trivial — add 3 modules in single config line and rebuilding initramfs) so any tips/gotchas on this are welcome as well.

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• Do hard drive enclosures fail/is it the HDD or enclosure?

  - by x0a

  I'm having a whole host of problems with an external hard drive that was working just fine a couple of hours ago. I've had this problem before once, and that was about 3 months ago, here's what I documented: So a couple of hours ago I turned off all my computers and shut off the power to all my devices in my room, then went and turned the power off at the main switch so I could change an outlet. A couple hours later, after I've already slowly turned everything back on, I go to my xbox to try and watch a movie and it can't seem to list any of the movies I've got. So I go to my desktop to find that my external hard drive isn't there.. even though it's on and connected. It's also stationary and hidden behind something so there's not a whole lot of tampering/physical wear to that external. I plug it into my laptop to try and see what's going on. It starts making this endless loud screeching noise. None of that clicking that's usually associated with hd damage. It's not listed in my computers, and it shows up in Disk Management as "uninitialized" asking me to choose between two different partition types. After carefully disconnecting it and connecting it back, it asks me to format it, which I cancel. I start googling about my issue, starting to accept the situation, torn as hell and helpless and just about ready to toss the thing. Suddenly the screeching stops, after almost 45 minutes of it going, and Disk Management lists the drive as "Online" and "Healthy". Explorer pops up with all my files! I'm still being really careful with it and weary and treating it as though it's in fragile shape. I've downloaded some S.M.A.R.T. software to read the values and everything is listed as "OK" . No reallocated sectors, no read errors, no seek errors. I also ran a quick self-test, which completed without error. Everything seems fine. It looks to be a perfectly healthy external hard drive. So what the hell was that about? Was it doing some sort of maintenance or self-test? How am I supposed to tell the difference? I would've undoubtedly killed the drive for sure if had it gone on a bit longer. I've got the same problem now, with one exception: it doesn't magically reappear after the screeching stops. Occasionally I manage to get some S.M.A.R.T. diagnostics information, which basically reads everything as fine. The only problem is that my HD isn't initializing (so I can't access anything in it). I'm able to successfully run a quick smart test but not an extended one (I've only tried it once but got conflicting indications as to whether it was actually making any progress or not (was stuck on Random read test). So, final question (if all else fails): Could the hard drive enclosure be failing rather than the HDD? Is this a likely possibility at all? How would I know?

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• How can a single disk in a hardware SATA RAID-10 array bring the entire array to a screeching halt?

  - by Stu Thompson

  Prelude: I'm a code-monkey that's increasingly taken on SysAdmin duties for my small company. My code is our product, and increasingly we provide the same app as SaaS. About 18 months ago I moved our servers from a premium hosting centric vendor to a barebones rack pusher in a tier IV data center. (Literally across the street.) This ment doing much more ourselves--things like networking, storage and monitoring. As part the big move, to replace our leased direct attached storage from the hosting company, I built a 9TB two-node NAS based on SuperMicro chassises, 3ware RAID cards, Ubuntu 10.04, two dozen SATA disks, DRBD and . It's all lovingly documented in three blog posts: Building up & testing a new 9TB SATA RAID10 NFSv4 NAS: Part I, Part II and Part III. We also setup a Cacit monitoring system. Recently we've been adding more and more data points, like SMART values. I could not have done all this without the awesome boffins at ServerFault. It's been a fun and educational experience. My boss is happy (we saved bucket loads of $$$), our customers are happy (storage costs are down), I'm happy (fun, fun, fun). Until yesterday. Outage & Recovery: Some time after lunch we started getting reports of sluggish performance from our application, an on-demand streaming media CMS. About the same time our Cacti monitoring system sent a blizzard of emails. One of the more telling alerts was a graph of iostat await. Performance became so degraded that Pingdom began sending "server down" notifications. The overall load was moderate, there was not traffic spike. After logging onto the application servers, NFS clients of the NAS, I confirmed that just about everything was experiencing highly intermittent and insanely long IO wait times. And once I hopped onto the primary NAS node itself, the same delays were evident when trying to navigate the problem array's file system. Time to fail over, that went well. Within 20 minuts everything was confirmed to be back up and running perfectly. Post-Mortem: After any and all system failures I perform a post-mortem to determine the cause of the failure. First thing I did was ssh back into the box and start reviewing logs. It was offline, completely. Time for a trip to the data center. Hardware reset, backup an and running. In /var/syslog I found this scary looking entry: Nov 15 06:49:44 umbilo smartd[2827]: Device: /dev/twa0 [3ware_disk_00], 6 Currently unreadable (pending) sectors Nov 15 06:49:44 umbilo smartd[2827]: Device: /dev/twa0 [3ware_disk_07], SMART Prefailure Attribute: 1 Raw_Read_Error_Rate changed from 171 to 170 Nov 15 06:49:45 umbilo smartd[2827]: Device: /dev/twa0 [3ware_disk_10], 16 Currently unreadable (pending) sectors Nov 15 06:49:45 umbilo smartd[2827]: Device: /dev/twa0 [3ware_disk_10], 4 Offline uncorrectable sectors Nov 15 06:49:45 umbilo smartd[2827]: Num Test_Description Status Remaining LifeTime(hours) LBA_of_first_error Nov 15 06:49:45 umbilo smartd[2827]: # 1 Short offline Completed: read failure 90% 6576 3421766910 Nov 15 06:49:45 umbilo smartd[2827]: # 2 Short offline Completed: read failure 90% 6087 3421766910 Nov 15 06:49:45 umbilo smartd[2827]: # 3 Short offline Completed: read failure 10% 5901 656821791 Nov 15 06:49:45 umbilo smartd[2827]: # 4 Short offline Completed: read failure 90% 5818 651637856 Nov 15 06:49:45 umbilo smartd[2827]: So I went to check the Cacti graphs for the disks in the array. Here we see that, yes, disk 7 is slipping away just like syslog says it is. But we also see that disk 8's SMART Read Erros are fluctuating. There are no messages about disk 8 in syslog. More interesting is that the fluctuating values for disk 8 directly correlate to the high IO wait times! My interpretation is that: Disk 8 is experiencing an odd hardware fault that results in intermittent long operation times. Somehow this fault condition on the disk is locking up the entire array Maybe there is a more accurate or correct description, but the net result has been that the one disk is impacting the performance of the whole array. The Question(s) How can a single disk in a hardware SATA RAID-10 array bring the entire array to a screeching halt? Am I being naïve to think that the RAID card should have dealt with this? How can I prevent a single misbehaving disk from impacting the entire array? Am I missing something?

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• I am starting to think that Prevx.com isnt a legit site...but heres my long-winded question

  - by cop1152

  I apologize in advance for the long-winded post. I posted it all because I believe its informative and may be useful. Also, I posted my question at the end. Moments ago I was RDC to a file server in my home (from inside my home). I had opened Firefox and Googled for a manufacturers website. Immediately after clicking the link, Firefox abruptly closed. This seemed odd to me to so I checked the running processes and discovered d.exe, e.exe, and f.exe running. I Googled these processes on a different machine and found them belonging to a key-logger/screen-capturer/trojan called defender.exe, which according to the Prevx lives in c:\documents and settings\user\local settings\temp. (Prevx link http://www.prevx.com/filenames/147352809685142526-X1/DEFENDER32.EXE.html) Simultaneously, an obviously-spoofed Windows Firewall popup appeared on the server asking me to click ‘yes’ to update Windows Firewall. At this time I ended all rogue processes, emptied the temp folder, removed defender.exe from startup, and checked my registry and a few other locations. Before deleting Defender.exe I noted that it was created moments ago, just before Firefox crashed. I believe that I was ‘almost’ infected with this malware. I believe that it needed me to click the phony popup in order to complete infection because it wasn’t allowed to execute processes from the temp folder. After cleaning the machine, I restarted it and have been monitoring it for over an hour. I am debating on whether or not to restore the Windows partition (a separate physical drive from the data) or to just watch it for awhle. I should mention that, because of the specs on this machine, I do not run antivirus software, but I know it well and inspect it regularly. It is a very old Compaq with a 400mhz processer and 512mb of ram. I have a static IP and the server is in the DMZ running an FTP client and some HTTP server software. All files transferred to and stored on this machine are scanned for malware before transferring. Usually the machine only runs 19 processes and performs pretty well for its intended purpose. I posted the story so that you could be aware of a possible new piece of malware and how it acts, but I also have a question or two. First, over the last few months I have noticed that PREVX is listed at the top of most of my Google searches when researching malware, especially for new or obscure malware…and they always want you to purchase something. I don’t think they are one of the top AV companies, so it seems odd that they are always the top Google result. Does anyone have any experience with any of their products? Also, what sites do you rely on for malware researching? Recently, I have found it difficult to find good info because of HijackThis-logs and other deadend info cluttering up my searches. And lastly, besides antivirus, third-party firewall, etc, what settings would you use to lock down a machine to make it more secure in instances where a stubborn admin like myself refuses to run AV? Thanks.

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• linux raid 1: right after replacing and syncing one drive, the other disk fails - understanding what is going on with mdstat/mdadm

  - by devicerandom

  We have an old RAID 1 Linux server (Ubuntu Lucid 10.04), with four partitions. A few days ago /dev/sdb failed, and today we noticed /dev/sda had pre-failure ominous SMART signs (~4000 reallocated sector count). We replaced /dev/sdb this morning and rebuilt the RAID on the new drive, following this guide: http://www.howtoforge.com/replacing_hard_disks_in_a_raid1_array Everything went smooth until the very end. When it looked like it was finishing to synchronize the last partition, the other old one failed. At this point I am very unsure of the state of the system. Everything seems working and the files seem to be all accessible, just as if it synchronized everything, but I'm new to RAID and I'm worried about what is going on. The /proc/mdstat output is: Personalities : [raid1] [linear] [multipath] [raid0] [raid6] [raid5] [raid4] [raid10] md3 : active raid1 sdb4[2](S) sda4[0] 478713792 blocks [2/1] [U_] md2 : active raid1 sdb3[1] sda3[2](F) 244140992 blocks [2/1] [_U] md1 : active raid1 sdb2[1] sda2[2](F) 244140992 blocks [2/1] [_U] md0 : active raid1 sdb1[1] sda1[2](F) 9764800 blocks [2/1] [_U] unused devices: <none> The order of [_U] vs [U_]. Why aren't they consistent along all the array? Is the first U /dev/sda or /dev/sdb? (I tried looking on the web for this trivial information but I found no explicit indication) If I read correctly for md0, [_U] should be /dev/sda1 (down) and /dev/sdb1 (up). But if /dev/sda has failed, how can it be the opposite for md3 ? I understand /dev/sdb4 is now spare because probably it failed to synchronize it 100%, but why does it show /dev/sda4 as up? Shouldn't it be [__]? Or [_U] anyway? The /dev/sda drive now cannot even be accessed by SMART anymore apparently, so I wouldn't expect it to be up. What is wrong with my interpretation of the output? I attach also the outputs of mdadm --detail for the four partitions: /dev/md0: Version : 00.90 Creation Time : Fri Jan 21 18:43:07 2011 Raid Level : raid1 Array Size : 9764800 (9.31 GiB 10.00 GB) Used Dev Size : 9764800 (9.31 GiB 10.00 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 0 Persistence : Superblock is persistent Update Time : Tue Nov 5 17:27:33 2013 State : clean, degraded Active Devices : 1 Working Devices : 1 Failed Devices : 1 Spare Devices : 0 UUID : a3b4dbbd:859bf7f2:bde36644:fcef85e2 Events : 0.7704 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 17 1 active sync /dev/sdb1 2 8 1 - faulty spare /dev/sda1 /dev/md1: Version : 00.90 Creation Time : Fri Jan 21 18:43:15 2011 Raid Level : raid1 Array Size : 244140992 (232.83 GiB 250.00 GB) Used Dev Size : 244140992 (232.83 GiB 250.00 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 1 Persistence : Superblock is persistent Update Time : Tue Nov 5 17:39:06 2013 State : clean, degraded Active Devices : 1 Working Devices : 1 Failed Devices : 1 Spare Devices : 0 UUID : 8bcd5765:90dc93d5:cc70849c:224ced45 Events : 0.1508280 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 18 1 active sync /dev/sdb2 2 8 2 - faulty spare /dev/sda2 /dev/md2: Version : 00.90 Creation Time : Fri Jan 21 18:43:19 2011 Raid Level : raid1 Array Size : 244140992 (232.83 GiB 250.00 GB) Used Dev Size : 244140992 (232.83 GiB 250.00 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 2 Persistence : Superblock is persistent Update Time : Tue Nov 5 17:46:44 2013 State : clean, degraded Active Devices : 1 Working Devices : 1 Failed Devices : 1 Spare Devices : 0 UUID : 2885668b:881cafed:b8275ae8:16bc7171 Events : 0.2289636 Number Major Minor RaidDevice State 0 0 0 0 removed 1 8 19 1 active sync /dev/sdb3 2 8 3 - faulty spare /dev/sda3 /dev/md3: Version : 00.90 Creation Time : Fri Jan 21 18:43:22 2011 Raid Level : raid1 Array Size : 478713792 (456.54 GiB 490.20 GB) Used Dev Size : 478713792 (456.54 GiB 490.20 GB) Raid Devices : 2 Total Devices : 2 Preferred Minor : 3 Persistence : Superblock is persistent Update Time : Tue Nov 5 17:19:20 2013 State : clean, degraded Active Devices : 1 Working Devices : 2 Failed Devices : 0 Spare Devices : 1 Number Major Minor RaidDevice State 0 8 4 0 active sync /dev/sda4 1 0 0 1 removed 2 8 20 - spare /dev/sdb4 The active sync on /dev/sda4 baffles me. I am worried because if tomorrow morning I have to replace /dev/sda, I want to be sure what should I sync with what and what is going on. I am also quite baffled by the fact /dev/sda decided to fail exactly when the raid finished resyncing. I'd like to understand what is really happening. Thanks a lot for your patience and help. Massimo

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• Removing expired certificates from LDS (new ver of ADAM)

  - by jonthebrewer

  Hi all. This is my situation: We are in the process of replacing a certificate store currently hosted on Sun's iPlanet with Microsoft's Lightweight Directory Services (new version of ADAM with Server 2008). These certificates have been imported into LDS into an application partition (say o=myorg, C=AU). Under this structure I have around 40,000 OU's each one representing a customer under each customers OU are one or more user (iNetOrg) objects (around 60,000 in all). In each user are one or more certificates in the UserCertificate attribute. A combination of in-house written application code and proprietory PKI code reads and publishes these certficates to validate financial transactions. As the LDAP path of the certificates is stored within the customer certificates (and within the application code) and there is zero appetite for changing any of the code, I have had to pick up the iPlanet directory as a whole and dump it in LDS in the same structure. (I will not be using or hosting a Microsoft CA, just implementing an LDAP compliant directory to host these certificates) We have fully tested the application using the data in LDS and everything works fine - here is my dilema and question (finally, phew!) There was no process put in place for removing revoked or expired certificates, consequently the vast majority of the data is completely useless, the system has been running for about 8 years! I have done a quick analysis and I estimate that at least 80% of the data is no longer valid. As I am taking on responsibility for managing the directory I would like to start with a clean directory. Does anyone have any idea how I can cleanup these expired certificates. I am not a highly experienced scripter but have some background in VB. I have been researching the use of CAPICOM and have a feeling this may be able to be used but in exactly what way I am not sure?? I would prefer to write a script that I could specify an expiration date (say any certs that expired prior to 2010) then run against the LDS paritition. This way I can reuse the script periodically to cleanup the directory (as mentioned above - I have no way to adjust the applications that are writing the certs, this is with a third party). Another, less attractive, alternative is to massage the LDIF file (2.7 million lines!) to rip the certs out prior to the import Any help and advice MUCH appreciated. Cheers Jon

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• JBoss EJB Bean not bound

  - by portoalet

  Hi, I have the following error Exception in thread "main" javax.naming.NameNotFoundException: CounterBean not bound trying to access an EJB JAR CounterBean.jar deployed on JBoss5 from a client application outside the Application Server. From the Jboss log, it looks like it does not have a global JNDI name? Is this ok? What have I done wrong? JBoss log: 13:50:39,669 INFO [JBossASKernel] Created KernelDeployment for: Counter.jar 13:50:39,672 INFO [JBossASKernel] installing bean: jboss.j2ee:jar=Counter.jar,name=CounterBean,service=EJB3 13:50:39,672 INFO [JBossASKernel] with dependencies: 13:50:39,672 INFO [JBossASKernel] and demands: 13:50:39,673 INFO [JBossASKernel] partition:partitionName=DefaultPartition; Required: Described 13:50:39,673 INFO [JBossASKernel] jboss.ejb:service=EJBTimerService; Required: Described 13:50:39,673 INFO [JBossASKernel] and supplies: 13:50:39,673 INFO [JBossASKernel] jndi:CounterBean 13:50:39,673 INFO [JBossASKernel] Added bean(jboss.j2ee:jar=Counter.jar,name=CounterBean,service=EJB3) to KernelDeployment of: Counte r.jar 13:50:39,712 INFO [SessionSpecContainer] Starting jboss.j2ee:jar=Counter.jar,name=CounterBean,service=EJB3 13:50:39,727 INFO [EJBContainer] STARTED EJB: com.don.CounterBean ejbName: CounterBean 13:50:39,732 INFO [JndiSessionRegistrarBase] Binding the following Entries in Global JNDI: The client code is: public static void main(String[] args) throws NamingException, InterruptedException { InitialContext ctx = new InitialContext(); Counter s = (Counter)ctx.lookup("CounterBean/remote"); for(int i = 0; i < 100; i++ ) { s.printCount(i); Thread.sleep(1000); } } Error message: java -Djava.naming.provider.url=jnp://123.123.123.123:1099 -Djava.naming.factory.initial=org.jnp.interfaces.NamingContextFactory com.don.Client Exception in thread "main" javax.naming.NameNotFoundException: CounterBean not bound at org.jnp.server.NamingServer.getBinding(NamingServer.java:771) at org.jnp.server.NamingServer.getBinding(NamingServer.java:779) at org.jnp.server.NamingServer.getObject(NamingServer.java:785) at org.jnp.server.NamingServer.lookup(NamingServer.java:396) at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at sun.rmi.server.UnicastServerRef.dispatch(UnicastServerRef.java:305) at sun.rmi.transport.Transport$1.run(Transport.java:159) at java.security.AccessController.doPrivileged(Native Method) at sun.rmi.transport.Transport.serviceCall(Transport.java:155) at sun.rmi.transport.tcp.TCPTransport.handleMessages(TCPTransport.java:535) at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run0(TCPTransport.java:790) at sun.rmi.transport.tcp.TCPTransport$ConnectionHandler.run(TCPTransport.java:649) at java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) at java.lang.Thread.run(Thread.java:619) at sun.rmi.transport.StreamRemoteCall.exceptionReceivedFromServer(StreamRemoteCall.java:255) at sun.rmi.transport.StreamRemoteCall.executeCall(StreamRemoteCall.java:233) at sun.rmi.server.UnicastRef.invoke(UnicastRef.java:142) at org.jnp.server.NamingServer_Stub.lookup(Unknown Source) at org.jnp.interfaces.NamingContext.lookup(NamingContext.java:726) at org.jnp.interfaces.NamingContext.lookup(NamingContext.java:686) at javax.naming.InitialContext.lookup(InitialContext.java:392) at com.don.Client.main(Client.java:10)

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• Reliable way of generating unique hardware ID

  - by mr.b

  Question: what's the best way to accomplish following. I have to come up with unique ID for each networked client, such that: it (ID) should persist once client software is installed on target computer, and should continue to persist if software is re-installed on same computer and same OS installment, it should not change if hardware configuration is modified in most ways (except changing the motherboard) When hard drive with client software installed is cloned to another computer with identical hardware configuration (or, as similar as possible), client software should be aware of that change. A little bit of explanation and some back-story: This question is basically age old question that also touches topic of software copy-protection, as some of mechanisms used in that area are mentioned here. I should be clear at this point that I'm not looking for a copy-protection scheme. Please, read on. :) I'm working on a client-server software that is supposed to work in local network. One of problems I have to solve is to identify each unique client in network (not so much of a problem), so that I can apply certain attributes to every specific client, retain and enforce those attributes during deployment lifetime of a specific client. While I was looking for a solution, I was aware of following: Windows activation system uses some kind of heavy fingerprinting mechanism, that is extremely sensitive to hardware modifications, Disk imaging software copies along all Volume IDs (tied to each partition when formatted), and custom, uniquely generated IDs during installation process, during first run, or in any other way, that is strictly software in its nature, and stored in registry or on hard drive, so it's very easy to confuse two Obvious choice for this kind of problem would be to find out BIOS identifiers (not 100% sure if this is unique through identical motherboard models, though), as that's the only thing I can rely on, that isn't duplicated, transferred by cloning, and that can't be changed (at least not by using some user-space program). Everything else fails as either being not reliable (MAC cloning, anyone?), or too demanding (in terms that it's too sensitive to configuration changes). Am I missing something obvious here? Sub-question that I'd like to ask is, am I doing it correctly, architecture-wise? Perhaps there is a better tool for task that I have to accomplish... Another approach I had in mind is something similar to handshake mechanism, where server maintains internal lookup table of connected client IDs (which can be even completely software-based and non-unique at any given moment), and tells client to come up with different ID during handshake, if duplicate ID is provided upon connection. That approach, unfortunately, doesn't play nicely with one of requirements to tie attributes to specific client during lifetime.

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• Connecting to Active Directory Application Mode from Perl

  - by Khurram Aziz

  I am trying to connect to Active Directory Application Mode instance. The instance is conenctable from third party LDAP clients like Softerra LDAP Browser. But I am getting the following error when connecting from Perl Net::LDAP=HASH(0x876d8e4) sending: Net::LDAP=HASH(0x876d8e4) received: 30 84 00 00 00 A7 02 01 02 65 84 00 00 00 9E 0A 0........e...... 01 01 04 00 04 84 00 00 00 93 30 30 30 30 30 34 ..........000004 44 43 3A 20 4C 64 61 70 45 72 72 3A 20 44 53 49 DC: LdapErr: DSI 44 2D 30 43 30 39 30 36 32 42 2C 20 63 6F 6D 6D D-0C09062B, comm 65 6E 74 3A 20 49 6E 20 6F 72 64 65 72 20 74 6F ent: In order to 20 70 65 72 66 6F 72 6D 20 74 68 69 73 20 6F 70 perform this op 65 72 61 74 69 6F 6E 20 61 20 73 75 63 63 65 73 eration a succes 73 66 75 6C 20 62 69 6E 64 20 6D 75 73 74 20 62 sful bind must b 65 20 63 6F 6D 70 6C 65 74 65 64 20 6F 6E 20 74 e completed on t 68 65 20 63 6F 6E 6E 65 63 74 69 6F 6E 2E 2C 20 he connection., 64 61 74 61 20 30 2C 20 76 65 63 65 00 __ __ __ data 0, vece.` My directory structure is Partition: CN=Apps,DC=MyCo,DC=COM User exists as CN=myuser,CN=Apps,DC=MyCo,DC=COM I have couple of other entries of the custom class which I am interested to browse; those instances appear fine in ADSI Edit, Softerra LDAP Browser etc. I am new to Perl....My perl code is #!/usr/bin/perl use Net::LDAP; $ldap = Net::LDAP->new("127.0.0.1", debug => 2, user => "CN=myuser,CN=Apps,DC=MyCo,DC=COM", password => "secret" ) or die "$@"; $ldap->bind(version => 3) or die "$@"; print "Connected to ldap\n"; $mesg = $ldap->search( filter => "(objectClass=*)" ) or die ("Failed on search.$!"); my $max = $mesg->count; print "$max records found!\n"; for( my $index = 0 ; $index < $max ; $index++) { my $entry = $mesg->entry($index); my $dn = $entry->dn; @attrs = $entry->attributes; foreach my $var (@attrs) { $attr = $entry->get_value( $var, asref => 1 ); if ( defined($attr) ) { foreach my $value ( @$attr ) { print "$var: $value\n"; } } } } $ldap->unbind();

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• Finding minimum cut-sets between bounded subgraphs

  - by Tore

  If a game map is partitioned into subgraphs, how to minimize edges between subgraphs? I have a problem, Im trying to make A* searches through a grid based game like pacman or sokoban, but i need to find "enclosures". What do i mean by enclosures? subgraphs with as few cut edges as possible given a maximum size and minimum size for number of vertices for each subgraph that act as a soft constraints. Alternatively you could say i am looking to find bridges between subgraphs, but its generally the same problem. Given a game that looks like this, what i want to do is find enclosures so that i can properly find entrances to them and thus get a good heuristic for reaching vertices inside these enclosures. So what i want is to find these colored regions on any given map. My Motivation The reason for me bothering to do this and not just staying content with the performance of a simple manhattan distance heuristic is that an enclosure heuristic can give more optimal results and i would not have to actually do the A* to get some proper distance calculations and also for later adding competitive blocking of opponents within these enclosures when playing sokoban type games. Also the enclosure heuristic can be used for a minimax approach to finding goal vertices more properly. A possible solution to the problem is the Kernighan-Lin algorithm: function Kernighan-Lin(G(V,E)): determine a balanced initial partition of the nodes into sets A and B do A1 := A; B1 := B compute D values for all a in A1 and b in B1 for (i := 1 to |V|/2) find a[i] from A1 and b[i] from B1, such that g[i] = D[a[i]] + D[b[i]] - 2*c[a][b] is maximal move a[i] to B1 and b[i] to A1 remove a[i] and b[i] from further consideration in this pass update D values for the elements of A1 = A1 / a[i] and B1 = B1 / b[i] end for find k which maximizes g_max, the sum of g[1],...,g[k] if (g_max > 0) then Exchange a[1],a[2],...,a[k] with b[1],b[2],...,b[k] until (g_max <= 0) return G(V,E) My problem with this algorithm is its runtime at O(n^2 * lg(n)), i am thinking of limiting the nodes in A1 and B1 to the border of each subgraph to reduce the amount of work done. I also dont understand the c[a][b] cost in the algorithm, if a and b do not have an edge between them is the cost assumed to be 0 or infinity, or should i create an edge based on some heuristic. Do you know what c[a][b] is supposed to be when there is no edge between a and b? Do you think my problem is suitable to use a multi level problem? Why or why not? Do you have a good idea for how to reduce the work done with the kernighan-lin algorithm for my problem?

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• Best way to handle multiple tables to replace one big table in Rails? (e.g. 'Books1', 'Books2', etc.

  - by mikep

  Hello, I've decided to use multiple tables for an entity (e.g. Books1, Books2, Books3, etc.), instead of just one main table which could end up having a lot of rows (e.g. just Books). I'm doing this to try and to avoid a potential future performance drop that could come with having too many rows in one table. With that, I'm looking for a good way to handle this in Rails, mainly by trying to avoid loading a bunch of unused associations. (I know that I could use a partition for this, but, for now, I've decided to go the 'multiple tables' route.) Each user has their books placed into a specific table. The actual book table is chosen when the user is created, and all of their books go into the same table. I'm going to split the adds across the tables. The goal is to try and keep each table pretty much even -- but that's a different issue. One thing I don't particularly want to have is a bunch of unused associations in the User class. Right now, it looks like I'd have to do the following: class User < ActiveRecord::Base has_many :books1, :books2, :books3, :books4, :books5 end class Books1 < ActiveRecord::Base belongs_to :user end class Books2 < ActiveRecord::Base belongs_to :user end class Books3 < ActiveRecord::Base belongs_to :user end I'm assuming that the main performance hit would come in terms of memory and possibly some method call overhead for each User object, since it has to load all of those associations, which in turn creates all of those nice, dynamic model accessor methods like User.find_by_. But for each specific user, only one of the book tables would be usable/applicable, since all of a user's books are stored in the same table. So, only one of the associations would be in use at any time and any other has_many :bookX association that was loaded would be a waste. For example, with a user.id of 2, I'd only need books3.find_by_author('Author'), but the way I'm thinking of setting this up, I'd still have access to Books1..n. I don't really know Ruby/Rails does internally with all of those has_many associations though, so maybe it's not so bad. But right now I'm thinking that it's really wasteful, and that there may just be a better, more efficient way of doing this. So, a few questions: 1) Is there's some sort of special Ruby/Rails methodology that could be applied to this 'multiple tables to represent one entity' scheme? Are there any 'best practices' for this? 2) Is it really bad to have so many unused has_many associations for each object? Is there a better way to do this? 3) Does anyone have any advice on how to abstract the fact that there's multiple book tables behind a single books model/class? For example, so I can call books.find_by_author('Author') instead of books3.find_by_author('Author'). Thank you!

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• Is the design notion of layers contrived?

  - by Bruce

  Hi all I'm reading through Eric Evans' awesome work, Domain-Driven Design. However, I can't help feeling that the 'layers' model is contrived. To expand on that statement, it seems as if it tries to shoe-horn various concepts into a specific, neat model, that of layers talking to each other. It seems to me that the layers model is too simplified to actually capture the way that (good) software works. To expand further: Evans says: "Partition a complex program into layers. Develop a design within each layer that is cohesive and that depends only on the layers below. Follow standard architectural patterns to provide loose coupling to the layers above." Maybe I'm misunderstanding what 'depends' means, but as far as I can see, it can either mean a) Class X (in the UI for example) has a reference to a concrete class Y (in the main application) or b) Class X has a reference to a class Y-ish object providing class Y-ish services (ie a reference held as an interface). If it means (a), then this is clearly a bad thing, since it defeats re-using the UI as a front-end to some other application that provides Y-ish functionality. But if it means (b), then how is the UI any more dependent on the application, than the application is dependent on the UI? Both are decoupled from each other as much as they can be while still talking to each other. Evans' layer model of dependencies going one way seems too neat. First, isn't it more accurate to say that each area of the design provides a module that is pretty much an island to itself, and that ideally all communication is through interfaces, in a contract-driven/responsibility-driven paradigm? (ie, the 'dependency only on lower layers' is contrived). Likewise with the domain layer talking to the database - the domain layer is as decoupled (through DAO etc) from the database as the database is from the domain layer. Neither is dependent on the other, both can be swapped out. Second, the idea of a conceptual straight line (as in from one layer to the next) is artificial - isn't there more a network of intercommunicating but separate modules, including external services, utility services and so on, branching off at different angles? Thanks all - hoping that your responses can clarify my understanding on this..

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