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  • Python - from file to data structure?

    - by Seafoid
    Hi, I have large file comprising ~100,000 lines. Each line corresponds to a cluster and each entry within each line is a reference i.d. for another file (protein structure in this case), e.g. 1hgn 1dju 3nmj 8kfn 9opu 7gfb 4bui I need to read in the file as a list of lists where each line is a sublist, thus preserving the integrity of the cluster, e.g. nested_list = [['1hgn', '1dju', '3nmj', '8kfn'], ['9opu', '7gfb'], ['4bui']] My current code creates a nested list but the entries within each list are a single string and not comma separated. Therefore, I cannot splice the list with indices so easily. Any help greatly appreciated. Thanks, S :-)

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  • Can Wordpress Duplicate An Entire Page Structure?

    - by rob walsh
    I have a wordpress site that i've been working on that has some pages (as in NOT posts) that a client changes content on in order to target particular keywords. these pages have been using podscms for content management. The client now wants to be able to duplicate these pages any number of times and edit the text within them. So basically, he wants to be have a dozen or so versions of about 4 linked pages. Does anyone know if it's possible to duplicate an entire multipage structure like this in WP? Or any WP driven sites that implement segmentation similarly?

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  • data structure for counting frequencies in a database table-like format

    - by user373312
    i was wondering if there is a data structure optimized to count frequencies against data that is stored in a database table-like format. for example, the data comes in a (comma) delimited format below. col1, col2, col3 x, a, green x, b, blue ... y, c, green now i simply want to count the frequency of col1=x or col1=x and col2=green. i have been storing the data in a database table, but in my profiling and from empirical observation, database connection is the bottle-neck. i have tried using in-memory database solutions too, and that works quite well; the only problem is memory requirements and quirky init/destroy calls. also, i work mainly with java, but have experience with .net, and was wondering if there was any api to work with "tabular" data in a linq way using java. any help is appreciated.

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  • Appropriate data structure for a buffer of the packets

    - by psihodelia
    How to implement a buffer of the packets where each packet is of the form: typedef struct{ int32 IP; //4-byte IP-address int16 ID; //unique sequence id }t_Packet; What should be the most appropriate data structure which: (1) allows to collect at least 8000 such packets (fast Insert and Delete operations) (2) allows very fast filtering using IP address, so that only packets with given IP will be selected (3) allows very fast find operation using ID as a key (4) allows very fast (2), then (3) within filtered results ? RAM size does matter, e.g. no huge lookup table is possible to use.

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  • Data structure for unrooted trees

    - by Esmond
    I'm having problems figuring out how to build an unrooted tree with weighted edges and what data structure to store such a tree. An example of an unrooted tree would be like the one here: http://www.bio.davidson.edu/courses/GENOMICS/seq/unrooted.gif The problem i am having is the leaves would only have 1 link to the internal nodes and the internal nodes would have 3 links(the internal nodes would have 2 children and a link to another internal node). Do i have to distinguish between the 2 different kinds of nodes or can i have one class having the function of both types of nodes?

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  • TFS 2008 and Common libraries folder structure.

    - by Doerr
    TFS 2008 and Common Libraries I have created a Team Project called "Common Library" that will host code used in numerous different Team Projects throughout TFS. For sake of argument, lets say we have 2 distinct Librarys under the "Common Library" Team Projects, MailProject and LoggingProject. Other projects throughout TFS will be using the binary representation of these projects via branching and not the actual source code. What is the best way to set up the folder structure for this Team Project? Do I add the project to the "Common Library" and simply "include" the bin/release folder as part of the project? I have seen some examples of people creating a seperate "Deploy" folder. I assume this is synonamous with the bin/release folder?

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  • SVN correct directory structure

    - by jax
    I followed this tutorial to setup SVN on my Fedora box http://www.ashishkulkarni.com/installing-subversion-on-fedora-linux/ It worked. However, there is no trunk, tags or branches when I set this up. In the tutorial he creates a sandbox project /svn/repos/sandbox Now I am assuming that all projects will go under repos /svn/repos/project1 /svn/repos/project2 When I view the project there are no trunk, tags or branches, I have not yet checked in any project, will these appear when I do that? As I understand all my files should go below the trunk. What are the tags and branches for? Just some clarification about the structure would be nice. Thanks.

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  • JNAerator Unnamed Union Missing in Structure

    - by Nick
    I'm trying to get JNAerator to generate some JNA backed Java code from a C shared library and everything is fine except that it failed to generate an unnamed union nested inside a structure. Example: typedef struct MY_STRUCTURE { union { My_Type1 var1; My_Type2 var2; }; }MY_STRUCTURE; If I change the header to make the union have a name it will work. But for obvious reasons I can't just change the header without breaking the shared library I'm trying to use. Any solutions other than changing the header file and shared library to named union?

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  • Tree data structure in php

    - by Piyush
    in my application user starts a new tree or get added under a child-user and keep on adding users in branches in such a way- >there are 10 level of tree type structure. >root node contain 1 user and each node(user) can have max 5 child-user in this way tree will be like level 0 = 1 user , level 1 = 5 user, level 2 = 25 user , level 3 = 125 user and so on. I created one MySQL table having columns like- User_id , level, super_id, child1_id, child2_id, child3_id, child4_id, child5_id my question is How can I get all child-user(child to child also) of a particular user at any level do I need to add some more columns in my table??

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  • what mysql table structure is better

    - by Sergey
    I have very complicated search algorithm on my site, so i decided to make a table with cache or maybe all possible results. I wanna ask what structure would be better, or maybe not the one of them? (mySQL) 1) word VARCHAR, results TEXT or BLOB where i'll store ids of found objects (for example 6 chars for each id) 2) word VARCHAR, result INT, but words are not unique now i think i'll have about 200 000 rows in 1) with 1000-10000 ids each row or 200 000 000+ rows in 2) First way takes more storage memory but i think it would be much faster to find 1 unique row among 200 000, than 1000 rows among 200 mln non unique rows i think about index on word column and no sphinx. So that do YOU think? p.s. as always, sorry for my english if it's not very good.

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  • How to organize product catalog site in Drupal 6?

    - by user319366
    Hello there, please advice me how to organize product catalog site with such structure (this is pages which should be in site map): - Home page - About Us -- Team -- Contacts - Products -- Category --- Product ---- Overview ---- Photo gallery ---- Variants -- Category --- Subcategory --- Product ---- Overview ---- Photo gallery ---- Variants I know that i can use Page nodes for general pages like About page. And i can prepare Product node with CCK with needed fields. Then i can use taxonomy vocabulary for product categories/subcategories. Is this a right way to do such functionality? Or better to use just child/parent nodes? And how i can show subpages menu on product page? How i can organize menus? I need one menu with primary links, second menu below it, for secondary links (except Products catalog) and sidebar menu for Products catalog. Please advice. May be this is easy questions, but i just learning Drupal (but i have experience with other CMS). Thanks a lot.

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  • How do I take the advantage of the variable column key/value structure of Cassandra

    - by icejade
    If I have to predefine all the columns, how do I take the advantage of the variable column key/value structure of cassandra? If I use update table command, it will insert null for all the rows which don't have that column. This is same as relational DB. For example, for contact column family, I have name, phone, email. I have 100 contacts have all 3 field. Then number 101 contact has skype id which I want to add. If I use insert statement, it won't let me add skypeid since it's not defined in the CF. So I have to run alter statement to change the CF, then all the first 100 contacts will have a null field for each of them.

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  • How to structure a bigger/complicated project?

    - by Per
    Hello, I'm creating this (big?) project in high school where I'm programming the game Shithead (card game) (so that two people can play against eachother). I'll use mostly PHP, MySQL, JavaScript and Ajax. But I have never made a project like this before. I have only made like CMS-systems and so on. Do you guys have any tips on how I should structure this project? I'm also not so used to Object-oriented programming, but I guess I should consider this. Should I, for example, make a class for the cards? I'm very thankful for any tips or good links!

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  • Where should I store my App specific config files in WPF

    - by Akash Deshpande
    Background : I have some Application Data. i.e. the Database, come important config files. This data is vital for the application to start else it is exited. Problem : Where should I store this data. i.e in which folder and where. Right Now (This is wrong) it is stored in a folder in Debug/App_Data. But is causing issues in git and when we publish the App the data is not found. So where can we store this folder ? Present Structure is "WpfApplication2\WpfApplication2\bin\Debug" These Files need to be present when the app is started. So they need to be a part of the app itself.

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  • Namespacing technique in JavaScript, recommended? performant? issues to be aware of?

    - by Bjartr
    In a project I am working on I am structuring my code as follows MyLib = { AField:0, ASubNamespace:{ AnotherField:"value", AClass:function(param) { this.classField = param; this.classFunction = function(){ // stuff } } }, AnotherClass:function(param) { this.classField = param; this.classFunction = function(){ // stuff } } } and so on like that to do stuff like: var anInstance = new MyLib.ASubNamespace.AClass("A parameter."); Is this the right way to go about achieving namespacing? Are there performance hits, and if so, how drastic? Do performance degradations stack as I nest deeper? Are there any other issues I should be aware of when using this structure? I care about every little bit of performance because it's a library for realtime graphics, so I'm taking any overhead very seriously.

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  • structure in .NET

    - by redpaladin
    My problem is very simple.. My problem is to send a structure beetween a program in C to a C# program.. I made a struct in C#: public struct NetPoint { public float lat; // 4 bytes public float lon; // 4 bytes public int alt; // 4 bytes public long time; // 8 bytes } Total size of the struct must be 20 bytes When i do a sizeof() of this struct System.Diagnostics.Debug.WriteLine("SizeOf(NetPoint)=" + System.Runtime.InteropServices.Marshal.SizeOf(new NetPoint())); The debug console show : SizeOf(NetPoint)=24 But i expected to have 20 bytes ? Why do I have a difference ? Thank you in advance

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  • create tree/XML structure from SQL query c#

    - by Tim Bassett
    Here is my current issue. I need to display a tree like structure displaying a recall roster. Our DBA created a stored procedure that returns [level],[name],[contact_info]. Example looks like: [1] [test name1] [contact info] [2] [sub to1] [contact info] [3] [sub to2] [contact info] [4] [sub to3] [contact info] [3] [sub to2] [contact info] [2] [sub to1] [contact info] etc... It's sorted in the order of the hierarchy I haven't really worked with XML much but is that the way to go in loading/presenting this data. Currently when I retrieving the data I'm returning it in a datatable. There may also be a need to export this data to Excel. Can anyone point me a good direction to go with this?

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  • Mapping C structure to an XML element

    - by EFraim
    Suppose I have a structure in C or C++, such as: struct ConfigurableElement { int ID; char* strName; long prop1; long prop2; ... }; I would like to load/save it to/from the following XML element: <ConfigurableElement ID="1" strName="namedElem" prop1="2" prop2="3" ... /> Such a mapping can be trivially done in Java/C# or any other language with run-time reflection for the matter. Can it be done in any non-tedious way in C++ with macros/template trickery? Bonus points for handling nested structures/unions.

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  • Data structure name: combination array/linked list

    - by me_and
    I have come up with a data structure that combines some of the advantages of linked lists with some of the advantages of fixed-size arrays. It seems very obvious to me, and so I'd expect someone to have thought of it and named it already. Does anyone know what this is called: Take a small fixed-size array. If the number of elements you want to put in your array is greater than the size of the array, add a new array and whatever pointers you like between the old and the new. Thus you have: Static array ————————————————————————— |1|2|3|4|5|6|7|8|9|a|b|c| ————————————————————————— Linked list ———— ———— ———— ———— ———— |1|*->|2|*->|3|*->|4|*->|5|*->NULL ———— ———— ———— ———— ———— My thing: ———————————— ———————————— |1|2|3|4|5|*->|6|7|8|9|a|*->NULL ———————————— ————————————

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  • The data structure of libev watchers

    - by changchang
    Libev uses three data structures to storage different watchers. Heap: for watchers that sorted by time, such as ev_timer and ev_periodic. Linked list: such as ev_io, ev_signal, ev_child and etc. Array: such as ev_prepare, ev_check, ev_async and etc. There is no doubt about that uses heap to store timer watcher. But what is the criteria of selecting linked list and array? The data structure that stores ev_io watchers seems a little complex. It first is an array that with fd as its index and the element in the array is a linked list of ev_io watcher. It is more convenient to allocate space for array if use linked list as element. Is it the reason? Or just because of the insert or remove operation of ev_io is more frequently and the ev_prepare seems more stable? Or any other reasons?

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  • Need an efficient algorithm solve this kind of complex structure

    - by Rizvan
    Problem Statement is : Given 2 Dimensional array, print output for example If 4 rows and 6 columns, output would be: 1 2 3 4 5 6 16 17 18 19 20 7 15 24 23 22 21 8 14 13 12 11 10 9 I tried it is looking like square within square but when I attempted this problem, I put so many while and if loops but didn't got exact answer. If row and columns increases how to handle it? This is not homework. I was learning solving complex structure so I need to understand it by some guidance.

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  • Spreading dynamic with community structure

    - by YogurtFruit
    I have a data set which I hope to simulate the spreading dynamic with community structure. The steps I follow is import the data to a complex network with Networkx partition the network into some modules which are known as communities simulate the SIS model and draw plots with and without communities. Something confused me between step 2 and step 3. After partitioning, I get some communities which contains nodes number. The community numbers and nodes numbers are the only input to step 3, and how I simulate SIS with and without communities?

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  • About Attributes member of LUID_AND_ATTRIBUTES used in TOKEN_PRIVILEGES structure

    - by Astaroth
    MSDN article, Enabling and Disabling Privileges in C++, provided the a code example to show how to enable or disable a privilege in an access token. I quote the part in questioned: tp.PrivilegeCount = 1; tp.Privileges[0].Luid = luid; if (bEnablePrivilege) tp.Privileges[0].Attributes = SE_PRIVILEGE_ENABLED; else tp.Privileges[0].Attributes = 0; What is the meaning of zero value for Attributes member? According to the documentation of TOKEN_PRIVILEGES structure, the attributes of a privilege can be a combination of the following values: SE_PRIVILEGE_ENABLED  (it is 0x00000002L in WinNT.h) SE_PRIVILEGE_ENABLED_BY_DEFAULT  (it is 0x00000001L in WinNT.h) SE_PRIVILEGE_REMOVED  (it is 0x00000004L in WinNT.h) SE_PRIVILEGE_USED_FOR_ACCESS  (it is 0x80000000L in WinNT.h) So, we don't see any valid constant with a value of zero. I guess, the zero is equal to SE_PRIVILEGE_REMOVED. Anybody here could explain what the zero value really does?

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  • Heroku and Github integration (how to structure the project)

    - by Noah
    I'm creating a webservice and I want to store the source on github and run the app on heroku. I haven't seen my exact scenario addressed anywhere on the 'net so far, so I'll ask it here: I want to have the following directory structure: /project .git README <-- project readme file TODO.otl <-- project outline ... <-- other project-related stuff /my_rails_app app config ... README <-- rails' readme file In the above, project corresponds to http://github.com/myuser/project, and my_rails_app is the code that should be pushed to heroku. Do I need a separate branch for the rails app, or is there a simpler way that I'm missing? I guess my project-related non-rails files could live in my_rails_app, but the rails README already lives there and it seems inconsistent to overwrite that. However, if I leave it, my github page for the rails app will contain the rails readme, which makes no sense. Thanks, Noah P.S. I tried just setting it up as described above and running git push heroku from the main project folder. Of course, heroku doesn't know I want to deploy the subfolder: -----> Heroku receiving push ! Heroku push rejected, no Rails or Rack app detected.

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  • structured vs. unstructured data in db

    - by Igor
    the question is one of design. i'm gathering a big chunk of performance data with lots of key-value pairs. pretty much everything in /proc/cpuinfo, /proc/meminfo/, /proc/loadavg, plus a bunch of other stuff, from several hundred hosts. right now, i just need to display the latest chunk of data in my UI. i will probably end up doing some analysis of the data gathered to figure out performance problems down the road, but this is a new application so i'm not sure what exactly i'm looking for performance-wise just yet. i could structure the data in the db -- have a column for each key i'm gathering. the table would end up being O(100) columns wide, it would be a pain to put into the db, i would have to add new columns if i start gathering a new stat. but it would be easy to sort/analyze the data just using SQL. or i could just dump my unstructured data blob into the table. maybe three columns -- host id, timestamp, and a serialized version of my array, probably using JSON in a TEXT field. which should I do? am i going to be sorry if i go with the unstructured approach? when doing analysis, should i just convert the fields i'm interested in and create a new, more structured table? what are the trade-offs i'm missing here?

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