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• Problem with executing dssp (secondary structure assignment)

  - by Mana

  I followed a previous post to install dssp on ubuntu How to install dssp (secondary structure assignments) under 12.04? After the installation I tried to execute dssp which was in /usr/local/bin/dssp But it gave me the following error bash: /usr/local/bin/dssp: cannot execute binary file Also I tried to analyse some trajectory files from a simulation using the code do_dssp -s md.tpr -f traj.xtc But it also failed giving me the error below Reading file md.tpr, VERSION 4.5.5 (single precision) Reading file md.tpr, VERSION 4.5.5 (single precision) Segmentation fault (core dumped) Please post me a solution for this problem. Thank you!

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• Online Accounts auth over and over again without success

  - by Mike Pretzlaw

  I just added my Google account to the "Online Accounts" in Gnome. Before my last restart the account couldn't be added for unknown reason. I authorized Gnome access to my Google Account, the window closed and nothing happened. Now I authorized Ubuntu access to my Google Account which worked well: But I can not open the Gnome Online Accounts even when I delete every online account: It's icon show up that it is loading in the dash but then suddenly disappears without any message. How to debug that? What can I do?

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• Gartner Places Oracle in Leaders Quadrant for CRM Customer Service Contact Centers

  - by andrea.mulder

  Through 2013, four major initiatives will dominate overall customer service strategies: Tying together service interaction channels Integrating social CRM capabilities Analyzing the customer experience Apply business rules and knowledge in real time Gartner's Magic Quadrant for CRM Customer Service Contact Centers positions Oracle's Siebel CRM in the leaders quadrant.

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• Installation of software from Ubuntu software centre

  - by ashishdalvi86

  When i try to install softwares from software centre i get an error message as follows : Requires installation of untrusted packages in details the following is mentioned: libcddb2 libdvbpsi7 libebml3 libiso9660-8 libmatroska5 libresid-builder0c2a libsdl-image1.2 libsidplay2 libtar0 libupnp3 libva-x11-1 libvcdinfo0 libxcb-composite0 libxcb-keysyms1 libxcb-randr0 libxcb-xv0 Whether I click on OK or Repair either ways the window closes and I cannot download & install the software.

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• How can I Instal shockwave on Ubuntu

  - by Navjot Singh

  I got this computer from someone and it had ubuntu installed on it. I like it but I find it complicated and I have been trying to download and every time I try to install something an error comes up Archive: /home/singh/Downloads/Shockwave_Installer_Full.exe [/home/singh/Downloads/Shockwave_Installer_Full.exe] End-of-central-directory signature not found. Either this file is not a zipfile, or it constitutes one disk of a multi-part archive. In the latter case the central directory and zipfile comment will be found on the last disk(s) of this archive. zipinfo: cannot find zipfile directory in one of /home/singh/Downloads/Shockwave_Installer_Full.exe or /home/singh/Downloads/Shockwave_Installer_Full.exe.zip, and cannot find /home/singh/Downloads/Shockwave_Installer_Full.exe.ZIP, period. Please help me uninstall ubuntu and get Windows back or help me get these downloads to work.

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• Cannot launch software centre, neither update

  - by Michal

  m@samsung:~$ sudo rm /var/lib/apt/lists/* -vf [sudo] password for m: rm: cannot remove `/var/lib/apt/lists/partial': Is a directory m@samsung:~$ sudo apt-get update N: Ignoring file 'gnomebaker.lis' in directory '/etc/apt/sources.list.d/' as it has an invalid filename extension E: Malformed line 1 in source list /etc/apt/sources.list.d/gnomebaker.list (URI parse) E: The list of sources could not be read. m@samsung:~$

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• how to get the application listed on open with menu?

  - by user17182377182122092121021929

  I have installed the sublime text 2 in sublime text by http://www.technoreply.com/how-to-install-sublime-text-2-on-ubuntu-12-04-unity/ way. now I can see them on when I click Win button and search for it. Same time I want to see them in open with context. I means when I right click on file and choose. open with other application how I can choose the sublime text. I can't see the option their to do this. Thanks for help in advance.

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• installArchives() failed: perl: warning: Setting locale failed.

  - by Alwin Doss

  I get the following error while updating ubuntu 12.04 LTS installArchives() failed: perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN.ISO8859-1" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). locale: Cannot set LC_CTYPE to default locale: No such file or directory locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory Preconfiguring packages ... perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN.ISO8859-1" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). locale: Cannot set LC_CTYPE to default locale: No such file or directory locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory Preconfiguring packages ... perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN.ISO8859-1" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). locale: Cannot set LC_CTYPE to default locale: No such file or directory locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory Preconfiguring packages ... perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN.ISO8859-1" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). locale: Cannot set LC_CTYPE to default locale: No such file or directory locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory Preconfiguring packages ... (Reading database ... (Reading database ... 5%% (Reading database ... 10%% (Reading database ... 15%% (Reading database ... 20%% (Reading database ... 25%% (Reading database ... 30%% (Reading database ... 35%% (Reading database ... 40%% (Reading database ... 45%% (Reading database ... 50%% (Reading database ... 55%% (Reading database ... 60%% (Reading database ... 65%% (Reading database ... 70%% (Reading database ... 75%% (Reading database ... 80%% (Reading database ... 85%% (Reading database ... 90%% (Reading database ... 95%% (Reading database ... 100%% (Reading database ... 430284 files and directories currently installed.) Preparing to replace libxml2-dev 2.7.8.dfsg-5.1ubuntu4.1 (using .../libxml2-dev_2.7.8.dfsg-5.1ubuntu4.2_i386.deb) ... Unpacking replacement libxml2-dev ... Preparing to replace libxml2 2.7.8.dfsg-5.1ubuntu4.1 (using .../libxml2_2.7.8.dfsg-5.1ubuntu4.2_i386.deb) ... Unpacking replacement libxml2 ... Preparing to replace gstreamer0.10-plugins-bad 0.10.22.3-2ubuntu2 (using .../gstreamer0.10-plugins-bad_0.10.22.3-2ubuntu2.1_i386.deb) ... Unpacking replacement gstreamer0.10-plugins-bad ... Preparing to replace libgstreamer-plugins-bad0.10-0 0.10.22.3-2ubuntu2 (using .../libgstreamer-plugins-bad0.10-0_0.10.22.3-2ubuntu2.1_i386.deb) ... Unpacking replacement libgstreamer-plugins-bad0.10-0 ... Preparing to replace ubuntu-keyring 2011.11.21 (using .../ubuntu-keyring_2011.11.21.1_all.deb) ... /var/lib/dpkg/info/samba4.postinst: 14: /var/lib/dpkg/info/samba4.postinst: /usr/share/samba/setoption.pl: Permission denied dpkg: error processing samba4 (--configure): subprocess installed post-installation script returned error exit status 126

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• Apps missing in Software Centre

  - by Hahn Do

  I'm using Elementary OS Luna beta 1, based on Ubuntu 12.04 Precise. I used to used Quantal, as I remember there were roughly 68000 apps. Massive commercial apps, and the banner on top shows new hot apps all the time. Now I switch to Elementary because Compiz sucks with Nvidia. However, Software Centre now only has 41000 apps. No commercial apps, no 3rd party apps. I'm pretty sure I have all the sources enabled: My sources.list: http://paste.ubuntu.com/1396213/

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• Problem by installing Java

  - by Shagun

  Yesterday night I was trying to download Java as per instructions given on http://developer.android.com/ .But I messed up somewhere and had to give up the thing. But since morning when ever I try to install or remove some thing I get the following response http://paste.ubuntu.com/1198084/ Please help fast. I am a newbie in android development and have to submit an app within 5 days from now for a project. And I need my linux machine working fine for that.

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• openfeint or gamecenter?

  - by Gajet

  which one has more potential customers, easier API, and wider feature list? i'm going to develop implement one of those two for highscore recording in my game which ones gives more advantages? and by the way I might be going to port my game to android, so if you know any thing that can help me not to rewrite my code (for example a C++ wrapper for both of them) that would mean a greate plus for openfeint in my point of veiw.

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• Installation problem ubuntu 12.04 with hp Pavilion dv4 3006tx laptop

  - by akeeb

  I am trying to install ubuntu 12.04 in my laptop containing model is HP Pavilion dv4 3006 tx , it has 1GB Graphics card( Video Graphics AMD Radeon HD 6750M (1 GB DDR5) ). Installation process is taken by my laptop but there are problem when rebooting it . When i want to open ubuntu as my operating system it does't open , my laptop Display turn off . more info about my pc configuration pls visit: http://h20000.www2.hp.com/bizsupport/TechSupport/Document.jsp?lang=en&cc=us&objectID=c02780984&jumpid=reg_R1002_USEN#A1 Collapse this comment

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• Ubuntu software centre, update manager fail to open

  - by Pradeep

  On my Ubuntu 12.04 LTS system the Software Centre and Update Manager do not open. I am unable to install any updates. And the message given below pops up. I am looking for a step-by-step process to fix this, and as a newbie, I don't know how to use the command line. Could not initialize the package information An unresolvable problem occurred while initializing the package information. Please report this bug against the 'update-manager' package and include the following error message: 'E:Encountered a section with no Package: header, E:Problem with MergeList /var/lib/apt/lists/extras.ubuntu.com_ubuntu_dists_precise_main_binary-i386_Packages, E:The package lists or status file could not be parsed or opened

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• How can I get a list of installed programs and corresponding size of each in Ubuntu?

  - by Philip Baker

  I would like to have a list of the installed software on my machine, with the disk space consumed by them. A previous answer here says "you can do this via GUI in Synaptic". This doesn't mean anything to me. I don't know what GUI is, and when I click on Synaptic, I do not get anything like the display shown in the answer, i.e. with "Settings ? Preferences" and "Columns and Fonts". In Windows, you just select 'Programs and Applications' in the Control Panel, and the list comes up immediately, with sizes. Is there something similar and simple with Ubuntu? Could the size of each program be included on the list of installed software? This would be the most obvious place to put it.

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• Is it possible to set a VPN through Tor? and have functionality for Software Updates?

  - by moazhmi

  Gday, I have been trying to do a software update on Trusty both on terminal and software update app but that hasnt been successful, apparently my ISP has a broken transparent proxy. moazhmi@moazhmi-K52F:~$ wget -S http://extras.ubuntu.com/ubuntu/dists/trusty/InRelease --2014-06-04 17:34:52-- http://extras.ubuntu.com/ubuntu/dists/trusty/InRelease Resolving extras.ubuntu.com (extras.ubuntu.com)... 91.189.92.152 Connecting to extras.ubuntu.com (extras.ubuntu.com)|91.189.92.152|:80... connected. HTTP request sent, awaiting response... HTTP/1.1 200 OK Content-Type: text/html; charset=UTF-8 Content-Length: 213 Date: Wed, 04 Jun 2014 14:34:52 GMT Server: Apache/2.2.22 (Ubuntu) Connection: Keep-Alive Vary: Accept-Encoding Length: 213 [text/html] Saving to: ‘InRelease’ 100%[======================================>] 213 --.-K/s in 0s 2014-06-04 17:34:52 (22.1 MB/s) - ‘InRelease’ saved [213/213] I was advised to refer back to the ISP with a complaint but that has returned with peanuts. My Question is - Is it possible to set a VPN through TOR , i.e whereas I can run software updates through terminals or the app . the browsing is out of question here as I need to update which I am not able to do / only on 12.04.

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• i cant use ubuntu software manager

  - by hossein

  It's the first time that I use ubuntu and I can't use the ubuntu software manager, when I type update codes in terminal it shows this error Reading package lists... Error! W: GPG error: http://ir.archive.ubuntu.com precise Release: The following signatures were invalid: BADSIG 40976EAF437D05B5 Ubuntu Archive Automatic Signing Key <[email protected]> E: Encountered a section with no Package: header E: Problem with MergeList /var/lib/apt/lists/ir.archive.ubuntu.com_ubuntu_dists_precise_main_binary-i386_Packages E: The package lists or status file could not be parsed or opened.

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• How can I install bleachbit in Ubuntu 12.04 LTS?

  - by gunjan parashar

  I'm unable to install bleachbit on my laptop running Ubuntu 12.04. The Ubuntu Software Centre shows that the package is available from the Universe software source and I have the option to "use this source" but after that, it gets stuck while quering software sources. How can I fix this problem? It's occurred to me that perhaps this could be from software sources being deleted in my configuration. If so, can someone tell me the default list of software sources? plz help me out and sorry for my poor english

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• Error while removing the new kernel 2.6.37

  - by Tarek

  Hi! I tried to install the new kernel but something went wrong and I'm trying to remove it now. The error massege is: mhd@Tarek-Laptop:~$ sudo apt-get install -f Reading package lists... Done Building dependency tree Reading state information... Done The following packages will be REMOVED: linux-image-2.6.37-020637-generic 0 upgraded, 0 newly installed, 1 to remove and 9 not upgraded. 1 not fully installed or removed. After this operation, 111MB disk space will be freed. Do you want to continue [Y/n]? y (Reading database ... 188780 files and directories currently installed.) Removing linux-image-2.6.37-020637-generic ... Examining /etc/kernel/postrm.d . run-parts: executing /etc/kernel/postrm.d/initramfs-tools 2.6.37-020637-generic /boot/vmlinuz-2.6.37-020637-generic run-parts: executing /etc/kernel/postrm.d/zz-update-grub 2.6.37-020637-generic /boot/vmlinuz-2.6.37-020637-generic /etc/default/grub: 33: Syntax error: EOF in backquote substitution run-parts: /etc/kernel/postrm.d/zz-update-grub exited with return code 2 Failed to process /etc/kernel/postrm.d at /var/lib/dpkg/info/linux-image-2.6.37-020637-generic.postrm line 328. dpkg: error processing linux-image-2.6.37-020637-generic (--remove): subprocess installed post-removal script returned error exit status 1 Errors were encountered while processing: linux-image-2.6.37-020637-generic E: Sub-process /usr/bin/dpkg returned an error code (1) The previous unsloved error is on this bug. This is my grub configuration file: # If you change this file, run 'update-grub' afterwards to update # /boot/grub/grub.cfg. GRUB_DEFAULT=0 #GRUB_HIDDEN_TIMEOUT=0 GRUB_HIDDEN_TIMEOUT_QUIET=true GRUB_TIMEOUT=10 GRUB_DISTRIBUTOR=`lsb_release -i -s 2> /dev/null || echo Debian` RUB_CMDLINE_LINUX_DEFAULT="quiet splash nomodeset video=uvesafb:mode_option=1024x768-24,mtrr=3,scroll=ywrap" video=uvesafb:mode_option=>>1024x768-24<<,mtrr=3,scroll=ywrap" GRUB_CMDLINE_LINUX=" vga=792 splash" # Uncomment to enable BadRAM filtering, modify to suit your needs # This works with Linux (no patch required) and with any kernel that obtains # the memory map information from GRUB (GNU Mach, kernel of FreeBSD ...) #GRUB_BADRAM="0x01234567,0xfefefefe,0x89abcdef,0xefefefef" # Uncomment to disable graphical terminal (grub-pc only) #GRUB_TERMINAL=console # The resolution used on graphical terminal # note that you can use only modes which your graphic card supports via VBE # you can see them in real GRUB with the command `vbeinfo' GRUB_GFXMODE=1024x768-24 # Uncomment if you don't want GRUB to pass "root=UUID=xxx" parameter to Linux #GRUB_DISABLE_LINUX_UUID=true # Uncomment to disable generation of recovery mode menu entries #GRUB_DISABLE_LINUX_RECOVERY="true" # Uncomment to get a beep at grub start #GRUB_INIT_TUNE="480 440 1" thank you for answering.

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• How Can Someone With Minimum Programming Experience Publish an App of an Existing Program not found in the Software Centre?

  - by Brenton Horne

  There's a free mathematics software that I would like to see in Ubuntu Software Centre, called, 'Sage.' I have minimal experience in programming, so I'm basically here asking if someone could either tell me how to accomplish this without said instructions being completely over my head or if someone could do it for me. For further information here's the sage homepage: http://sagemath.org/ and the .tar.lzma file for its installation is ~500MB and it takes around 2.2 GB on the HDD when installed, I found at least on 32 bit i386 Ubuntu 12.04 LTS. Any help will be greatly appreciated!

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• I am having a error with installing everything!

  - by Justin Baskaran

  Everytime I go to install wine, playonlinux I get this error:![enter image description here][1] Then I get other variations too but this altogether... People on other posts say I have to do a clean install is this right...I dont want to but if I have too I will... Pakcage dependencies cannot be resolved This error could be caused by required additonal software pakcages... details the following packages have unment dependencies: playonlinux

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• How to share folders using Oracle, Windows and Ubuntu

  - by Daniel Dang

  I use my laptop TOSHIBA, 4gig RAM, more 40gig free disks spaces and Vista Home Premium 64bits with service pack 2. I installed Oracle VM VirtalBox with success, after I installed UBUNTU version 8 with success ! I need to transfer files between Vista and UBUNTU on the same laptop, how I can do that ? Can I use SAMBA ? I try to use SAMBA but it is not success ! How I can install SAMBA on UBUNTU v.8 ?

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• Error while updating

  - by Alwin Doss

  I get the following error while updating ubuntu 12.04 LTS installArchives() failed: perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN.ISO8859-1" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). locale: Cannot set LC_CTYPE to default locale: No such file or directory locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory Preconfiguring packages ... perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN.ISO8859-1" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). locale: Cannot set LC_CTYPE to default locale: No such file or directory locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory Preconfiguring packages ... perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN.ISO8859-1" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). locale: Cannot set LC_CTYPE to default locale: No such file or directory locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory Preconfiguring packages ... perl: warning: Setting locale failed. perl: warning: Please check that your locale settings: LANGUAGE = (unset), LC_ALL = (unset), LANG = "en_IN.ISO8859-1" are supported and installed on your system. perl: warning: Falling back to the standard locale ("C"). locale: Cannot set LC_CTYPE to default locale: No such file or directory locale: Cannot set LC_MESSAGES to default locale: No such file or directory locale: Cannot set LC_ALL to default locale: No such file or directory Preconfiguring packages ... (Reading database ... (Reading database ... 5%% (Reading database ... 10%% (Reading database ... 15%% (Reading database ... 20%% (Reading database ... 25%% (Reading database ... 30%% (Reading database ... 35%% (Reading database ... 40%% (Reading database ... 45%% (Reading database ... 50%% (Reading database ... 55%% (Reading database ... 60%% (Reading database ... 65%% (Reading database ... 70%% (Reading database ... 75%% (Reading database ... 80%% (Reading database ... 85%% (Reading database ... 90%% (Reading database ... 95%% (Reading database ... 100%% (Reading database ... 430284 files and directories currently installed.) Preparing to replace libxml2-dev 2.7.8.dfsg-5.1ubuntu4.1 (using .../libxml2-dev_2.7.8.dfsg-5.1ubuntu4.2_i386.deb) ... Unpacking replacement libxml2-dev ... Preparing to replace libxml2 2.7.8.dfsg-5.1ubuntu4.1 (using .../libxml2_2.7.8.dfsg-5.1ubuntu4.2_i386.deb) ... Unpacking replacement libxml2 ... Preparing to replace gstreamer0.10-plugins-bad 0.10.22.3-2ubuntu2 (using .../gstreamer0.10-plugins-bad_0.10.22.3-2ubuntu2.1_i386.deb) ... Unpacking replacement gstreamer0.10-plugins-bad ... Preparing to replace libgstreamer-plugins-bad0.10-0 0.10.22.3-2ubuntu2 (using .../libgstreamer-plugins-bad0.10-0_0.10.22.3-2ubuntu2.1_i386.deb) ... Unpacking replacement libgstreamer-plugins-bad0.10-0 ... Preparing to replace ubuntu-keyring 2011.11.21 (using .../ubuntu-keyring_2011.11.21.1_all.deb) ... /var/lib/dpkg/info/samba4.postinst: 14: /var/lib/dpkg/info/samba4.postinst: /usr/share/samba/setoption.pl: Permission denied dpkg: error processing samba4 (--configure): subprocess installed post-installation script returned error exit status 126

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• Ubuntu App Submission won't allow the "free" bubble to be checked

  - by Compt

  I am at the final stages of the Ubuntu App Developer Showdown, and I'm right at the point where I am submitting my app. The problem I run in to however, is that even though buy is at $0.00, it will not allow me to click on the "free" button, and keep that configuration saved. So when I go to "preview your app", it shows it saying "USD $0.00 ---- Buy" instead of saying "Free ---- Install". So I was wondering if it makes any difference or not.

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• Who decides what category the software in the Ubuntu Software Centre is filed under, and who can we report errors to?

  - by coversnail

  I noticed when browsing through the Ubuntu Software Centre that some programs seem to be placed in the wrong categories, for example Pinta, an image editor, appears under Developer Tools (instead of Graphics) in my list of installed programs. Is this a case of the developer incorrectly categorising their software when they uploaded it to the software centre, or does Canonical decided what goes where? And if we notice an obvious mistake who do we inform, the software developer or file a bug somehow?

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• when i marked all check boxes in settings,update fails.

  - by user67966

  "W:Failed to fetch cdrom://Ubuntu 12.04 LTS Precise Pangolin - Release i386 (20120423)/dists/precise/main/binary-i386/Packages Please use apt-cdrom to make this CD-ROM recognized by APT. apt-get update cannot be used to add new CD-ROMs , W:Failed to fetch cdrom://Ubuntu 12.04 LTS Precise Pangolin - Release i386 (20120423)/dists/precise/restricted/binary-i386/Packages Please use apt-cdrom to make this CD-ROM recognized by APT. apt-get update cannot be used to add new CD-ROMs , E:Some index files failed to download. They have been ignored, or old ones used instead." the above information is a crash info.It happens when i manually update ubuntu.I have marked all check-boxes in settings which was by default not marked. What is the main reason for this problem?

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