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  • Extract points within a shape from a raster

    - by user308827
    Hi, I have a raster file (basically 2D array) with close to a million points. I am trying to extract a circle from the raster (and all the points that lie within the circle. Using ArcGIS is exceedingly slow for this. Can anyone suggest any image processing library that is both easy to learn and powerful and quick enough for something like this? Thanks!

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  • SQLAlchemy introspection of ORM classes/objects

    - by Adam Batkin
    I am looking for a way to introspect SQLAlchemy ORM classes/entities to determine the types and other constraints (like maximum lengths) of an entity's properties. For example, if I have a declarative class: class User(Base): __tablename__ = "USER_TABLE" id = sa.Column(sa.types.Integer, primary_key=True) fullname = sa.Column(sa.types.String(100)) username = sa.Column(sa.types.String(20), nullable=False) password = sa.Column(sa.types.String(20), nullable=False) created_timestamp = sa.Column(sa.types.DateTime, nullable=False) I would want to be able to find out that the 'fullname' field should be a String with a maximum length of 100, and is nullable. And the 'created_timestamp' field is a DateTime and is not nullable.

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  • cx_Oracle and output variables

    - by Tim
    I'm trying to do this again an Oracle 10 database: cursor = connection.cursor() lOutput = cursor.var(cx_Oracle.STRING) cursor.execute(""" BEGIN %(out)s := 'N'; END;""", {'out' : lOutput}) print lOutput.value but I'm getting DatabaseError: ORA-01036: illegal variable name/number Is it possible to define PL/SQL blocks in cx_Oracle this way?

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  • SQLAlchemy: who is in charge of the "session"? ( and how to unit-test with sessions )

    - by Nick Perkins
    I need some guidance on how to use session objects with SQLAlchemy, and how to organize Unit Tests of my mapped objects. What I would like to able to do is something like this: thing = BigThing() # mapped object child = thing.new_child() # create and return a related object thing.save() # will also save the child object In order to achieve this, I was thinking of having the BigThing actually add itself ( and it's children ) to the database -- but maybe this not a good idea? One reason to add objects as soon as possible is Automatic id values that are assigned by the database -- the sooner they are available, the fewer problems there are ( right? ) What is the best way to manage session objects? Who is in charge of the session? Should it be created only when required? or saved for a long time? What about Unit Tests for my mapped objects?...how should the session be handled? Is it ever OK to have mapped objects just automatically add themselves to a database? or is that going to lead to trouble?

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  • Unit testing authorization in a Pylons app fails; cookies aren't been correctly set or recorded

    - by Ian Stevens
    I'm having an issue running unit tests for authorization in a Pylons app. It appears as though certain cookies set in the test case may not be correctly written or parsed. Cookies work fine when hitting the app with a browser. Here is my test case inside a paste-generated TestController: def test_good_login(self): r = self.app.post('/dologin', params={'login': self.user['username'], 'password': self.password}) r = r.follow() # Should only be one redirect to root assert 'http://localhost/' == r.request.url assert 'Dashboard' in r This is supposed to test that a login of an existing account forwards the user to the dashboard page. Instead, what happens is that the user is redirected back to the login. The first POST works, sets the user in the session and returns cookies. Although those cookies are sent in the follow request, they don't seem to be correctly parsed. I start by setting a breakpoint at the beginning of the above method and see what the login response returns: > nosetests --pdb --pdb-failure -s foo.tests.functional.test_account:TestMainController.test_good_login Running setup_config() from foo.websetup > /Users/istevens/dev/foo/foo/tests/functional/test_account.py(33)test_good_login() -> r = self.app.post('/dologin', params={'login': self.user['username'], 'password': self.password}) (Pdb) n > /Users/istevens/dev/foo/foo/tests/functional/test_account.py(34)test_good_login() -> r = r.follow() # Should only be one redirect to root (Pdb) p r.cookies_set {'auth_tkt': '"4c898eb72f7ad38551eb11e1936303374bd871934bd871833d19ad8a79000000!"'} (Pdb) p r.request.environ['REMOTE_USER'] '4bd871833d19ad8a79000000' (Pdb) p r.headers['Location'] 'http://localhost/?__logins=0' A session appears to be created and a cookie sent back. The browser is redirected to the root, not the login, which also indicates a successful login. If I step past the follow(), I get: > /Users/istevens/dev/foo/foo/tests/functional/test_account.py(35)test_good_login() -> assert 'http://localhost/' == r.request.url (Pdb) p r.request.headers {'Host': 'localhost:80', 'Cookie': 'auth_tkt=""\\"4c898eb72f7ad38551eb11e1936303374bd871934bd871833d19ad8a79000000!\\"""; '} (Pdb) p r.request.environ['REMOTE_USER'] *** KeyError: KeyError('REMOTE_USER',) (Pdb) p r.request.environ['HTTP_COOKIE'] 'auth_tkt=""\\"4c898eb72f7ad38551eb11e1936303374bd871934bd871833d19ad8a79000000!\\"""; ' (Pdb) p r.request.cookies {'auth_tkt': ''} (Pdb) p r <302 Found text/html location: http://localhost/login?__logins=1&came_from=http%3A%2F%2Flocalhost%2F body='302 Found...y. '/149> This indicates to me that the cookie was passed in on the request, although with dubious escaping. The environ appears to be without the session created on the prior request. The cookie has been copied to the environ from the headers, but the cookies in the request seems incorrectly set. Lastly, the user is redirected to the login page, indicating that the user isn't logged in. Authorization in the app is done via repoze.who and repoze.who.plugins.ldap with repoze.who_friendlyform performing the challenge. I'm using the stock tests.TestController created by paste: class TestController(TestCase): def __init__(self, *args, **kwargs): if pylons.test.pylonsapp: wsgiapp = pylons.test.pylonsapp else: wsgiapp = loadapp('config:%s' % config['__file__']) self.app = TestApp(wsgiapp) url._push_object(URLGenerator(config['routes.map'], environ)) TestCase.__init__(self, *args, **kwargs) That's a webtest.TestApp, by the way. The encoding of the cookie is done in webtest.TestApp using Cookie: >>> from Cookie import _quote >>> _quote('"84533cf9f661f97239208fb844a09a6d4bd8552d4bd8550c3d19ad8339000000!"') '"\\"84533cf9f661f97239208fb844a09a6d4bd8552d4bd8550c3d19ad8339000000!\\""' I trust that that's correct. My guess is that something on the response side is incorrectly parsing the cookie data into cookies in the server-side request. But what? Any ideas?

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  • Efficiently generate a 16-character, alphanumeric string

    - by ensnare
    I'm looking for a very quick way to generate an alphanumeric unique id for a primary key in a table. Would something like this work? def genKey(): hash = hashlib.md5(RANDOM_NUMBER).digest().encode("base64") alnum_hash = re.sub(r'[^a-zA-Z0-9]', "", hash) return alnum_hash[:16] What would be a good way to generate random numbers? If I base it on microtime, I have to account for the possibility of several calls of genKey() at the same time from different instances. Or is there a better way to do all this? Thanks.

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  • Qt/PyQt dialog with togglable fullscreen mode - problem on Windows

    - by Guard
    I have a dialog created in PyQt. It's purpose and functionality don't matter. The init is: class MyDialog(QWidget, ui_module.Ui_Dialog): def __init__(self, parent=None): super(MyDialog, self).__init__(parent) self.setupUi(self) self.installEventFilter(self) self.setWindowFlags(Qt.Dialog | Qt.WindowTitleHint) self.showMaximized() Then I have event filtering method: def eventFilter(self, obj, event): if event.type() == QEvent.KeyPress: key = event.key() if key == Qt.Key_F11: if self.isFullScreen(): self.setWindowFlags(self._flags) if self._state == 'm': self.showMaximized() else: self.showNormal() self.setGeometry(self._geometry) else: self._state = 'm' if self.isMaximized() else 'n' self._flags = self.windowFlags() self._geometry = self.geometry() self.setWindowFlags(Qt.Tool | Qt.FramelessWindowHint) self.showFullScreen() return True elif key == Qt.Key_Escape: self.close() return QWidget.eventFilter(self, obj, event) As can be seen, Esc is used for dialog hiding, and F11 is used for toggling full-screen. In addition, if the user changed the dialog mode from the initial maximized to normal and possibly moved the dialog, it's state and position are restored after exiting the full-screen. Finally, the dialog is created on the MainWindow action triggered: d = MyDialog(self) d.show() It works fine on Linux (Ubuntu Lucid), but quite strange on Windows 7: if I go to the full-screen from the maximized mode, I can't exit full-screen (on F11 dialog disappears and appears in full-screen mode again). If I change the dialog's mode to Normal (by double-clicking its title), then go to full-screen and then return back, the dialog is shown in the normal mode, in the correct position, but without the title line. Most probably the reason for both cases is the same - the setWindowFlags doesn't work. But why? Is it also possible that it is the bug in the recent PyQt version? On Ubuntu I have 4.6.x from apt, and on Windows - the latest installer from the riverbank site.

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  • Is multi-level polymorphism possible in SQLAlchemy?

    - by Jace
    Is it possible to have multi-level polymorphism in SQLAlchemy? Here's an example: class Entity(Base): __tablename__ = 'entities' id = Column(Integer, primary_key=True) created_at = Column(DateTime, default=datetime.utcnow, nullable=False) entity_type = Column(Unicode(20), nullable=False) __mapper_args__ = {'polymorphic_on': entity_type} class File(Entity): __tablename__ = 'files' id = Column(None, ForeignKey('entities.id'), primary_key=True) filepath = Column(Unicode(255), nullable=False) file_type = Column(Unicode(20), nullable=False) __mapper_args__ = {'polymorphic_identity': u'file', 'polymorphic_on': file_type) class Image(File): __mapper_args__ = {'polymorphic_identity': u'image'} __tablename__ = 'images' id = Column(None, ForeignKey('files.id'), primary_key=True) width = Column(Integer) height = Column(Integer) When I call Base.metadata.create_all(), SQLAlchemy raises the following error: NotImplementedError: Can't generate DDL for the null type IntegrityError: (IntegrityError) entities.entity_type may not be NULL. This error goes away if I remove the Image model and the polymorphic_on key in File. What gives? (Edited: the exception raised was wrong.)

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  • Pygame, sounds don't play

    - by terabytest
    I'm trying to play sound files (.wav) with pygame but when I start it I never hear anything. This is the code: import pygame pygame.init() pygame.mixer.init() sounda= pygame.mixer.Sound("desert_rustle.wav") sounda.play() I also tried using channels but the result is the same

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  • What could cause Django to start failing its own tests after an OS and Django reinstall?

    - by Macha
    I had to reinstall my OS, and so, I reinstalled django 1.1. Since reinstalling, when I run tests in my app, I get several failures from django.contrib.auth. Logs: http://dpaste.com/178153/ I asked on #django, and no one is too sure what the cause of the errors are. Some of my own code fails its tests, because it's not fully written yet, but that shouldn't cause django to fail it's core tests... I have included django.contrib.admin, which was mentioned as a possible cause.

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  • Using Range Function

    - by Michael Alexander Riechmann
    My goal is to make a program that takes an input (Battery_Capacity) and ultimately spits out a list of the (New_Battery_Capacity) and the Number of (Cycle) it takes for it ultimately to reach maximum capacity of 80. Cycle = range (160) Charger_Rate = 0.5 * Cycle Battery_Capacity = float(raw_input("Enter Current Capacity:")) New_Battery_Capacity = Battery_Capacity + Charger_Rate if Battery_Capacity < 0: print 'Battery Reading Malfunction (Negative Reading)' elif Battery_Capacity > 80: print 'Battery Reading Malfunction (Overcharged)' elif float(Battery_Capacity) % 0.5 !=0: print 'Battery Malfunction (Charges Only 0.5 Interval)' while Battery_Capacity >= 0 and Battery_Capacity < 80: print New_Battery_Capacity I was wondering why my Cycle = range(160) isn't working in my program?

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  • How do I relate two models/tables in Django based on non primary non unique keys?

    - by wizard
    I've got two tables that I need to relate on a single field po_num. The data is imported from another source so while I have a little bit of control over what the tables look like but I can't change them too much. What I want to do is relate these two models so I can look up one from the other based on the po_num fields. What I really need to do is join the two tables so I can do a where on a count of the related table. I would like to do filter for all Order objects that have 0 related EDI856 objects. I tried adding a foreign key to the Order model and specified the db_column and to_fields as po_num but django didn't like that the fact that Edi856.po_num wasn't unique. Here are the important fields of my current models that let me display but not filter for the data that I want. class Edi856(models.Model): po_num = models.CharField(max_length=90, db_index=True ) class Order(models.Model): po_num = models.CharField(max_length=90, db_index=True) def in_edi(self): '''Has the edi been processed?''' return Edi856.objects.filter(po_num = self.po_num).count() Thanks for taking the time to read about my problem. I'm not sure what to do from here.

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  • How to write data by dynamic parameter name

    - by Maxim Welikobratov
    I need to be able to write data to datastore of google-app-engine for some known entity. But I don't want write assignment code for each parameter of the entity. I meen, I don't want do like this val_1 = self.request.get('prop_1') val_2 = self.request.get('prop_2') ... val_N = self.request.get('prop_N') item.prop_1 = val_1 item.prop_2 = val_2 ... item.prop_N = val_N item.put() instead, I want to do something like this args = self.request.arguments() for prop_name in args: item.set(prop_name, self.request.get(prop_name)) item.put() dose anybody know how to do this trick?

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  • Estimating the boundary of arbitrarily distributed data

    - by Dave
    I have two dimensional discrete spatial data. I would like to make an approximation of the spatial boundaries of this data so that I can produce a plot with another dataset on top of it. Ideally, this would be an ordered set of (x,y) points that matplotlib can plot with the plt.Polygon() patch. My initial attempt is very inelegant: I place a fine grid over the data, and where data is found in a cell, a square matplotlib patch is created of that cell. The resolution of the boundary thus depends on the sampling frequency of the grid. Here is an example, where the grey region are the cells containing data, black where no data exists. OK, problem solved - why am I still here? Well.... I'd like a more "elegant" solution, or at least one that is faster (ie. I don't want to get on with "real" work, I'd like to have some fun with this!). The best way I can think of is a ray-tracing approach - eg: from xmin to xmax, at y=ymin, check if data boundary crossed in intervals dx y=ymin+dy, do 1 do 1-2, but now sample in y An alternative is defining a centre, and sampling in r-theta space - ie radial spokes in dtheta increments. Both would produce a set of (x,y) points, but then how do I order/link neighbouring points them to create the boundary? A nearest neighbour approach is not appropriate as, for example (to borrow from Geography), an isthmus (think of Panama connecting N&S America) could then close off and isolate regions. This also might not deal very well with the holes seen in the data, which I would like to represent as a different plt.Polygon. The solution perhaps comes from solving an area maximisation problem. For a set of points defining the data limits, what is the maximum contiguous area contained within those points To form the enclosed area, what are the neighbouring points for the nth point? How will the holes be treated in this scheme - is this erring into topology now? Apologies, much of this is me thinking out loud. I'd be grateful for some hints, suggestions or solutions. I suspect this is an oft-studied problem with many solution techniques, but I'm looking for something simple to code and quick to run... I guess everyone is, really! Cheers, David

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  • How to set a __str__ method for all ctype Structure classes?

    - by Reuben Thomas
    [Since asking this question, I've found: http://www.cs.unc.edu/~gb/blog/2007/02/11/ctypes-tricks/ which gives a good answer.] I just wrote a __str__ method for a ctype-generated Structure class 'foo' thus: def foo_to_str(self): s = [] for i in foo._fields_: s.append('{}: {}'.format(i[0], foo.\_\_getattribute__(self, i[0]))) return '\n'.join(s) foo.\_\_str__ = foo_to_str But this is a fairly natural way to produce a __str__ method for any Structure class. How can I add this method directly to the Structure class, so that all Structure classes generated by ctypes get it? (I am using the h2xml and xml2py scripts to auto-generate ctypes code, and this offers no obvious way to change the names of the classes output, so simply subclassing Structure, Union &c. and adding my __str__ method there would involve post-processing the output of xml2py.)

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  • How can I load a sql "dump" file into sql alchemy

    - by JudoWill
    I have a large sql dump file ... with multiple CREATE TABLE and INSERT INTO statements. Is there any way to load these all into a SQLAlchemy sqlite database at once. I plan to use the introspected ORM from sqlsoup after I've created the tables. However, when I use the engine.execute() method it complains: sqlite3.Warning: You can only execute one statement at a time. Is there a way to work around this issue. Perhaps splitting the file with a regexp or some kind of parser, but I don't know enough SQL to get all of the cases for the regexp. Any help would be greatly appreciated. Will EDIT: Since this seems important ... The dump file was created with a MySQL database and so it has quite a few commands/syntax that sqlite3 does not understand correctly.

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  • Jython java call throws exception asking for 2 args when only one arg is coded

    - by clutch
    I have an Java method I want to call within my Jython servlet running on tomcat5. It looks like this: @SuppressWarnings("unchecked") public School loadByName(String name) { List<School> school; school = getHibernateTemplate().find("from " + getPersistentClass().getName() + " where name = ?", name); return uniqueResult(school); } I call it in Jython using: foobar = SchoolDAOHibernate.loadByName('Univeristy') It throws an error that says loadByName() expects 2 args; got 1. What other argument could it be looking for?

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  • SQLAlchemy Expression Language problem

    - by Torkel
    I'm trying to convert this to something sqlalchemy expression language compatible, I don't know if it's possible out of box and are hoping someone more experienced can help me along. The backend is PostgreSQL and if I can't make it as an expression I'll create a string instead. SELECT DISTINCT date_trunc('month', x.x) as date, COALESCE(b.res1, 0) AS res1, COALESCE(b.res2, 0) AS res2 FROM generate_series( date_trunc('year', now() - interval '1 years'), date_trunc('year', now() + interval '1 years'), interval '1 months' ) AS x LEFT OUTER JOIN( SELECT date_trunc('month', access_datetime) AS when, count(NULLIF(resource_id != 1, TRUE)) AS res1, count(NULLIF(resource_id != 2, TRUE)) AS res2 FROM tracking_entries GROUP BY date_trunc('month', access_datetime) ) AS b ON (date_trunc('month', x.x) = b.when) First of all I got a class TrackingEntry mapped to tracking_entries, the select statement within the outer joined can be converted to something like (pseudocode):: from sqlalchemy.sql import func, select from datetime import datetime, timedelta stmt = select([ func.date_trunc('month', TrackingEntry.resource_id).label('when'), func.count(func.nullif(TrackingEntry.resource_id != 1, True)).label('res1'), func.count(func.nullif(TrackingEntry.resource_id != 2, True)).label('res2') ], group_by=[func.date_trunc('month', TrackingEntry.access_datetime), ]) Considering the outer select statement I have no idea how to build it, my guess is something like: outer = select([ func.distinct(func.date_trunc('month', ?)).label('date'), func.coalesce(?.res1, 0).label('res1'), func.coalesce(?.res2, 0).label('res2') ], from_obj=[ func.generate_series( datetime.now(), datetime.now() + timedelta(days=365), timedelta(days=1) ).label(x) ]) Then I suppose I have to link those statements together without using foreign keys: outer.outerjoin(stmt???).??(func.date_trunc('month', ?.?), ?.when) Anyone got any suggestions or even better a solution?

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  • How do you determine an acceptable response time for App Engine DB requests?

    - by qiq
    According to this discussion of Google App Engine on Hacker News, A DB (read) request takes over 100ms on the datastore. That's insane and unusable for about 90% of applications. How do you determine what is an acceptable response time for a DB read request? I have been using App Engine without noticing any issues with DB responsiveness. But, on the other hand, I'm not sure I would even know what to look for in that regard :)

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  • Clean Method for a ModelForm in a ModelFormSet made by modelformset_factory

    - by Salyangoz
    I was wondering if my approach is right or not. Assuming the Restaurant model has only a name. forms.py class BaseRestaurantOpinionForm(forms.ModelForm): opinion = forms.ChoiceField(choices=(('yes', 'yes'), ('no', 'no'), ('meh', 'meh')), required=False, )) class Meta: model = Restaurant fields = ['opinion'] views.py class RestaurantVoteListView(ListView): queryset = Restaurant.objects.all() template_name = "restaurants/list.html" def dispatch(self, request, *args, **kwargs): if request.POST: queryset = self.request.POST.dict() #clean here return HttpResponse(json.dumps(queryset), content_type="application/json") def get_context_data(self, **kwargs): context = super(EligibleRestaurantsListView, self).get_context_data(**kwargs) RestaurantFormSet = modelformset_factory( Restaurant,form=BaseRestaurantOpinionForm ) extra_context = { 'eligible_restaurants' : self.get_eligible_restaurants(), 'forms' : RestaurantFormSet(), } context.update(extra_context) return context Basically I'll be getting 3 voting buttons for each restaurant and then I want to read the votes. I was wondering from where/which clean function do I need to call to get something like: { ('3' : 'yes'), ('2' : 'no') } #{ 'restaurant_id' : 'vote' } This is my second/third question so tell me if I'm being unclear. Thanks.

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  • Error while exiting cherrypy server

    - by Vijayendra Bapte
    Guys, I am getting following error while exiting cherrypy server. What is this error about? 2009-11-04 09:32:35,015 WARNING Error in atexit._run_exitfuncs: 2009-11-04 09:32:35,015 WARNING 2009-11-04 09:32:35,015 WARNING Traceback (most recent call last): 2009-11-04 09:32:35,015 WARNING File "atexit.pyc", line 24, in _run_exitfuncs 2009-11-04 09:32:35,015 WARNING File "logging\__init__.pyc", line 1486, in shutdown 2009-11-04 09:32:35,015 WARNING File "logging\__init__.pyc", line 746, in flush 2009-11-04 09:32:35,015 WARNING IOError: [Errno 9] Bad file descriptor 2009-11-04 09:32:35,015 WARNING Error in sys.exitfunc: 2009-11-04 09:32:35,015 WARNING Traceback (most recent call last): 2009-11-04 09:32:35,015 WARNING File "atexit.pyc", line 24, in _run_exitfuncs 2009-11-04 09:32:35,015 WARNING File "logging\__init__.pyc", line 1486, in shutdown 2009-11-04 09:32:35,015 WARNING File "logging\__init__.pyc", line 746, in flush 2009-11-04 09:32:35,015 WARNING IOError 2009-11-04 09:32:35,015 WARNING : 2009-11-04 09:32:35,015 WARNING [Errno 9] Bad file descriptor 2009-11-04 09:32:35,015 WARNING

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  • Use Regular expression with fileinput

    - by chrissygormley
    Hello, I am trying to replace a variable stored in another file using regular expression. The code I have tried is: r = re.compile(r"self\.uid\s*=\s*('\w{12})'") for line in fileinput.input(['file.py'], inplace=True): print line.replace(r.match(line), sys.argv[1]), The format of the variable in the file is: self.uid = '027FC8EBC2D1' I am trying to pass in a parameter in this format and use regular expression to verify that the sys.argv[1] is correct format and to find the variable stored in this file and replace it with the new variable. Can anyone help. Thanks for the help.

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