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• Which programming language to choose? (for a specific problem/domain, details inside)

  - by Bijan

  I am building a trading portfolio management system that is responsible for production, optimization, and simulation of non-high frequency trading portfolios (dealing with 1min or 3min bars of data, not tick data). I plan on employing Amazon web services to take on the entire load of the application. I have four choices that I am considering as language. a) Java b) C++ c) C# d) Python Here is the scope of the extremes of the project scope. This isn't how it will be, maybe ever, but it's within the scope of the requirements: Weekly simulation of 10,000,000 trading systems. (Each trading system is expected to have its own data mining methods, including feature selection algorithms which are extremely computationally-expensive. Imagine 500-5000 features using wrappers. These are not run often by any means, but it's still a consideration) Real-time production of portfolio w/ 100,000 trading strategies Taking in 1 min or 3 min data from every stock/futures market around the globe (approx 100,000) Portfolio optimization of portfolios with up to 100,000 strategies. (rather intensive algorithm) Speed is a concern, but I believe that Java can handle the load. I just want to make sure that Java CAN handle the above requirements comfortably. I don't want to do the project in C++, but I will if it's required. The reason C# is on there is because I thought it was a good alternative to Java, even though I don't like Windows at all and would prefer Java if all things are the same. Python - I've read somethings on PyPy and pyscho that claim python can be optimized with JIT compiling to run at near C-like speeds.... That's pretty much the only reason it is on this list, besides that fact that Python is a great language and would probably be the most enjoyable language to code in, which is not a factor at all for this project, but a perk. To sum up: - real time production - weekly simulations of a large number of systems - weekly/monthly optimizations of portfolios - large numbers of connections to collect data from There is no dealing with millisecond or even second based trades. The only consideration is if Java can possibly deal with this kind of load when spread out of a necessary amount of EC2 servers. Thank you guys so much for your wisdom.

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• Summarising (permanently) data in a SQL table

  - by Cylindric

  Geetings, Stackers. I have a huge number of data-points in a SQL table, and I want to summarise them in a way reminiscent of RRD. Assuming a table such as ID | ENTITY_ID | SCORE_DATE | SCORE | SOME_OTHER_DATA ----+-----------+------------+-------+----------------- 1 | A00000001 | 01/01/2010 | 100 | some data 2 | A00000002 | 01/01/2010 | 105 | more data 3 | A00000003 | 01/01/2010 | 104 | various text ... | ......... | .......... | ..... | ... ... | A00009999 | 01/01/2010 | 101 | ... | A00000001 | 02/01/2010 | 104 | ... | A00000002 | 02/01/2010 | 119 | ... | A00000003 | 02/01/2010 | 119 | ... | ......... | .......... | ..... | ... | A00009999 | 02/01/2010 | 101 | arbitrary data ... | ......... | .......... | ..... | ... ... | A00000001 | 01/02/2010 | 104 | ... | A00000002 | 01/02/2010 | 119 | ... | A00000003 | 01/01/2010 | 119 | I want to end up with one record per entity, per month: ID | ENTITY_ID | SCORE_DATE | SCORE | ----+-----------+------------+-------+ ... | A00000001 | 01/01/2010 | 100 | ... | A00000002 | 01/01/2010 | 105 | ... | A00000003 | 01/01/2010 | 104 | ... | A00000001 | 01/02/2010 | 100 | ... | A00000002 | 01/02/2010 | 105 | ... | A00000003 | 01/02/2010 | 104 | (I Don't care about the SOME_OTHER_DATA - I'll pick something - either the first or last record probably.) What's an easy way of doing this on a regular basis, so that anything in the last calendar month is summarised in this way? At the moment my plan is kind of: For each EntityID For each month Find average score for all records in given month Update first record with results of previous step Delete all records that aren't the first I can't think of a neat way of doing it though, that doesn't involve lots of updates and iteration. This can either be done in a SQL Stored Procedure, or it can be incorporated into the .Net app that's generating this data, so the solution doesn't really need to be "one big SQL script", but can be :) (SQL-2005)

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• Animating a pulsing UILabel?

  - by fuzzygoat

  I am trying to animate the color the the text on a UILabel to pulse from: [Black] to [White] to [Black] and repeat. - (void)timerFlash:(NSTimer *)timer { [[self navTitle] setTextColor:[[UIColor whiteColor] colorWithAlphaComponent:0.0]]; [UIView animateWithDuration:1 delay:0 options:UIViewAnimationOptionAllowUserInteraction animations:^{[[self navTitle] setTextColor:[[UIColor whiteColor] colorWithAlphaComponent:1.0]];} completion:nil]; } . [self setFadeTimer:[NSTimer scheduledTimerWithTimeInterval:1 target:self selector:@selector(timerFlash:) userInfo:nil repeats:YES]]; Firstly I am not sure of my method, my plan (as you can see above) was to set up a animation block and call it using a repeating NSTimer until canceled. My second problem (as you can see above) is that I am animating from black (alpha 0) to white (alpha 1) but I don't know how to animate back to black again so the animation loops seamlessly Essentially what I want is the text color to pulse on a UILabel until the user presses a button to continue. EDIT_001: I was getting into trouble because you can't animate [UILabel setColor:] you can however animated [UILabel setAlpha:] so I am going to give that a go. EDIT_002: - (void)timerFlash:(NSTimer *)timer { [[self navTitle] setAlpha:0.5]; [UIView animateWithDuration:2 delay:0 options:UIViewAnimationOptionAllowUserInteraction animations:^{[[self navTitle] setAlpha:0.9];} completion:nil]; } This works (BTW: I do want it to stop which is why I hooked it up to a NSTimer so I can cancel that) the only thing is that this animates from midGray to nearWhite and then pops back. Does anyone know how I would animate back from nearWhite to midGray so I get a nice smooth cycle? EDIT_003: (Solution) The code suggested by dave DeLong (see below) does indeed work when modified to use the CALayer opacity style attribute: UILabel *navTitle; @property(nonatomic, retain) UILabel *navTitle; . // ADD ANIMATION CABasicAnimation *anim = [CABasicAnimation animationWithKeyPath:@"opacity"]; [anim setTimingFunction:[CAMediaTimingFunction functionWithName:kCAMediaTimingFunctionEaseInEaseOut]]; [anim setFromValue:[NSNumber numberWithFloat:0.5]]; [anim setToValue:[NSNumber numberWithFloat:1.0]]; [anim setAutoreverses:YES]; [anim setDuration:0.5]; [[[self navTitle] layer] addAnimation:anim forKey:@"flash"]; . // REMOVE ANIMATION [[[self navTitle] layer] removeAnimationForKey:@"flash__"];

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• dojo layout tutorial dor version 1.7 doesn't work for 1.7.2

  - by Sheena

  This is sortof a continuation to dojo1.7 layout acting screwy. So I made some working widgets and tested them out, i then tried altering my work using the tutorial at http://dojotoolkit.org/documentation/tutorials/1.7/dijit_layout/ to make the layout nice. After failing at that in many interesting ways (thus my last question) I started on a new path. My plan is now to implement the layout tutorial example and then stick in my widgets. For some reason even following the tutorial wont work... everything loads then disappears and I'm left with a blank browser window. Any ideas? It just struck me that it could be browser compatibility issues, I'm working on Firefox 13.0.1. As far as I know Dojo is supposed to be compatible with this... anyway, have some code: HTML: <body class="claro"> <div id="appLayout" class="demoLayout" data-dojo-type="dijit.layout.BorderContainer" data-dojo-props="design: 'headline'"> <div class="centerPanel" data-dojo-type="dijit.layout.ContentPane" data-dojo-props="region: 'center'"> <div> <h4>Group 1 Content</h4> <p>stuff</p> </div> <div> <h4>Group 2 Content</h4> </div> <div> <h4>Group 3 Content</h4> </div> </div> <div class="edgePanel" data-dojo-type="dijit.layout.ContentPane" data-dojo-props="region: 'top'"> Header content (top) </div> <div id="leftCol" class="edgePanel" data-dojo-type="dijit.layout.ContentPane" data-dojo-props="region: 'left', splitter: true"> Sidebar content (left) </div> </div> </body> Dojo Configuration: var dojoConfig = { baseUrl: "${request.static_url('mega:static/js')}", //this is in a mako template tlmSiblingOfDojo: false, packages: [ { name: "dojo", location: "libs/dojo" }, { name: "dijit", location: "libs/dijit" }, { name: "dojox", location: "libs/dojox" }, ], parseOnLoad: true, has: { "dojo-firebug": true, "dojo-debug-messages": true }, async: true }; other js stuff: require(["dijit/layout/BorderContainer", "dijit/layout/TabContainer", "dijit/layout/ContentPane", "dojo/parser"]); css: html, body { height: 100%; margin: 0; overflow: hidden; padding: 0; } #appLayout { height: 100%; } #leftCol { width: 14em; }

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• SQL Server CTE referred in self joins slow

  - by Kharlos Dominguez

  Hello, I have written a table-valued UDF that starts by a CTE to return a subset of the rows from a large table. There are several joins in the CTE. A couple of inner and one left join to other tables, which don't contain a lot of rows. The CTE has a where clause that returns the rows within a date range, in order to return only the rows needed. I'm then referencing this CTE in 4 self left joins, in order to build subtotals using different criterias. The query is quite complex but here is a simplified pseudo-version of it WITH DataCTE as ( SELECT [columns] FROM table INNER JOIN table2 ON [...] INNER JOIN table3 ON [...] LEFT JOIN table3 ON [...] ) SELECT [aggregates_columns of each subset] FROM DataCTE Main LEFT JOIN DataCTE BananasSubset ON [...] AND Product = 'Bananas' AND Quality = 100 LEFT JOIN DataCTE DamagedBananasSubset ON [...] AND Product = 'Bananas' AND Quality < 20 LEFT JOIN DataCTE MangosSubset ON [...] GROUP BY [ I have the feeling that SQL Server gets confused and calls the CTE for each self join, which seems confirmed by looking at the execution plan, although I confess not being an expert at reading those. I would have assumed SQL Server to be smart enough to only perform the data retrieval from the CTE only once, rather than do it several times. I have tried the same approach but rather than using a CTE to get the subset of the data, I used the same select query as in the CTE, but made it output to a temp table instead. The version referring the CTE version takes 40 seconds. The version referring the temp table takes between 1 and 2 seconds. Why isn't SQL Server smart enough to keep the CTE results in memory? I like CTEs, especially in this case as my UDF is a table-valued one, so it allowed me to keep everything in a single statement. To use a temp table, I would need to write a multi-statement table valued UDF, which I find a slightly less elegant solution. Did some of you had this kind of performance issues with CTE, and if so, how did you get them sorted? Thanks, Kharlos

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• UIScrollView Infinite Scrolling

  - by Ben Robinson

  I'm attempting to setup a scrollview with infinite (horizontal) scrolling. Scrolling forward is easy - I have implemented scrollViewDidScroll, and when the contentOffset gets near the end I make the scrollview contentsize bigger and add more data into the space (i'll have to deal with the crippling effect this will have later!) My problem is scrolling back - the plan is to see when I get near the beginning of the scroll view, then when I do make the contentsize bigger, move the existing content along, add the new data to the beginning and then - importantly adjust the contentOffset so the data under the view port stays the same. This works perfectly if I scroll slowly (or enable paging) but if I go fast (not even very fast!) it goes mad! Heres the code: - (void) scrollViewDidScroll:(UIScrollView *)scrollView { float pageNumber = scrollView.contentOffset.x / 320; float pageCount = scrollView.contentSize.width / 320; if (pageNumber > pageCount-4) { //Add 10 new pages to end mainScrollView.contentSize = CGSizeMake(mainScrollView.contentSize.width + 3200, mainScrollView.contentSize.height); //add new data here at (320*pageCount, 0); } //*** the problem is here - I use updatingScrollingContent to make sure its only called once (for accurate testing!) if (pageNumber < 4 && !updatingScrollingContent) { updatingScrollingContent = YES; mainScrollView.contentSize = CGSizeMake(mainScrollView.contentSize.width + 3200, mainScrollView.contentSize.height); mainScrollView.contentOffset = CGPointMake(mainScrollView.contentOffset.x + 3200, 0); for (UIView *view in [mainContainerView subviews]) { view.frame = CGRectMake(view.frame.origin.x+3200, view.frame.origin.y, view.frame.size.width, view.frame.size.height); } //add new data here at (0, 0); } //** MY CHECK! NSLog(@"%f", mainScrollView.contentOffset.x); } As the scrolling happens the log reads: 1286.500000 1285.500000 1284.500000 1283.500000 1282.500000 1281.500000 1280.500000 Then, when pageNumber<4 (we're getting near the beginning): 4479.500000 4479.500000 Great! - but the numbers should continue to go down in the 4,000s but the next log entries read: 1278.000000 1277.000000 1276.500000 1275.500000 etc.... Continiuing from where it left off! Just for the record, if scrolled slowly the log reads: 1294.500000 1290.000000 1284.500000 1280.500000 4476.000000 4476.000000 4473.000000 4470.000000 4467.500000 4464.000000 4460.500000 4457.500000 etc.... Any ideas???? Thanks Ben.

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• How to stream semi-live audio over internet

  - by Thomas Tempelmann

  I want to write something like Skype, i.e. I have a constant audio stream on one computer and then recompress it in a format that's suitable for a latent internet connection, receive it on the other end and play it. Let's also assume that the internet connection is fairly modern and fast, i.e. DSL or alike, no slow connections over phone and such. The involved computers will also be rather modern (Dual Core Intel CPUs at 2GHz or more). I know how to handle the audio on the machines. What I don't know is how to transmit the audio in an efficient way. The challenges are: I'd like get good audio quality across the line. The stream should be received without drops. The stream may, however, be received with a little delay (a second delay is acceptable). I imagine that the transport software could first determine the average (and max) latency, then start the stream and tell the receiver to wait for that max latency before starting to play the audio. With that, if the latency doesn't get any higher, the entire stream will be playable on the other side without stutter or drops. If, due to unexpected IP latencies or blockages, the stream does get cut off, I want to be able to notice this so that I can take actions (e.g. abort the stream) and eventually start a new transmission. What are my options if I want do use ready-made software for the compression and tranmission? I have no intention to write my own audio compression engine, really. OTOH, I plan to sell the solution in a vertical market, meaning I can afford a few dollars of license fees per copy, but not $100s. I guess the simplest solution would be to just open a TCP stream, send a few packets back and forth to determine their running time (or even use UDP for that), then use the results as the guide for my max latency value, then simply fire the audio data in its raw form (uncompressed 16 bit stereo), along with a timing code over the TCP connection. The receiver reads the data and plays it with the pre-determined delay. That might just work with the type of fast connection I expect. I just wonder if there are better solutions to reach this goal, with better performance (lower latency) and less data (compressed). BTW, I first try to implement this on OS X, but might want to do it on Windows, too, if it proves successful.

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• mootools fx working except in ie9

  - by Craig

  This is my first attempt with Mootools, so I welcome a critique of the code. I have a dynamic list of images that expand on the 'click" event and contract on the 'mouseout' event. The code works fine in all browsers (FF, Safari, Chrome, even the smartphones) but not in IE9 (JS is enabled) Anyone with similar problem or solution? I plan to use a lightbox effect, downloading a larger & clearer image to the center of the page, instead of just resizing a small image. However, I am hesitant to attempt this, if there is problems with IE9. I have coded three image sizes with the upload commit, so the larger image is available for the lightbox, but, I don't see anything in mootools for a lightbox, or am I missing it? $i = 0; while($i < count($validate)) { <div class="validate"> <div class="validate_image_<?php echo $validate[$i]['validate_type']; ?>"> <div class="validate_image" id="validate_image_wrapper_<?php echo $i; ?>"> <?php if ($validate[$i]['validate_image_filename'] != '') { if (file_exists(UPLOAD_DIR . 'validate_image/' . str_replace('.', '_medium.', $validate[$i]['validate_image_filename']))) { echo '<img src="' . UPLOAD_URL . 'validate_image/' . str_replace('.', '_medium.', $validate[$i]['validate_image_filename']) . '" alt="Listing Image" />'; } else { echo '<img src="' . UPLOAD_URL . 'validate_image/' . str_replace('.', '_large.', $validate[$i]['validate_image_filename']) . '" alt="Listing image" />'; } } else { ?> <img src="/images/no_image_posted_validate.png" alt="no image posted" /> <?php } ?> </div> ... remainder of HTML display code function setupEnlargeImage() { window.myFx = new Fx({ duration: 200, transition: Fx.Transitions.Sine.easeOut }); $$('.validate_image').addEvent('click', function() { window.selectedImage = this.id; myFx.start(1,2.0); }); $$('.validate_image').addEvent('mouseout', function() { window.selectedImage = this.id; myFx.start(1.0,1); }); myFx.set = function(value) { var style = "scale(" + (value) + ")"; $(window.selectedImage).setStyles({ "-webkit-transform": style, "-moz-transform": style, "-o-transform": style, "-ms-transform": style, transform: style }); } }

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• Unlimited SMS API/Gateway (Sending and Receiving)

  - by Naif

  I am creating a chat application which requires that users be able to send and receive sms messages through a web interface. It would be somewhat similar to the text messaging service available in yahoo mail or in aol instant messenger. The situation is this: Given the high quantity of messages that would be sent and received, paying on a per message basis is not economically feasible. How is it that sites such as yahoo, aim, and twitter can send and receive unlimited sms messages? Essentially, I am looking for a way to send and receive unlimited sms from my computer. Below is a list of some approaches I've come up with but have run into problems with as well. If just one of the approaches can be utilized effectively, then I am fine. As a note on the nature of my application: I will only be sending messages to users that explicitly sign up for the service and permit the receiving of messages. They can unsubscribe at any time. This is to prevent spam. I am aware of software such as Kannel which allows one to connect to a providers smsc gateway. However, this adds the risk of not being approved by the provider which would be unacceptable. Is there any way to significantly mitigate this risk? Utilizing a gateway provider eliminates this risk, but adds the issue of per message pricing. I am also aware of email to sms. However, I have done some testing with that and it appears that this method results in many messages being undelivered or delivered VERY late. If it weren't for that, this approach would have been ideal. Is there any way to negotiate with carriers to remove me from their filters (considering the nature of my service as stated before)? I could use a gsm modem, but even with an "unilimited" plan on a sim card, there are still limits (around 100,000 messages or so). Furthermore, from my understanding, gsm modems are capable of only sending out around a dozen messages per minute. I need to be able to send out as much as several hundred messages per second. During the first 2 months, around 10 messages per second would suffice. There are ways to send out ads with messages to cover the per message costs. However, this is a deal-breaker since it has a high chance of tarnishing the quality of service. Furthermore, I know it is possible to do it without such ads since yahoo, aim, and twitter do not send ads with their messages.

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• 2nd Year College - Learning - Microsoft Server Products

  - by Ryan

  As the title says, I just finished my first year of college (majoring in Software Engineering). Fortunately my school likes Microsoft enough, and I can get pretty much anything I want that Microsoft sells. I also can get IBM Websphere and the like for free as well. Earlier this year, I set up an oldish computer (2.6 Pentium D, x64) to run ubuntu server headless. I'm predominately a Java developer, so Apache, Maven, Nexus, Sonar, SVN, etc made it onto the machine. It worked really well for personal and school projects, especially team projects (quick ramp up). Anyways, I started to pick up C# to complement my Java knowledge (don't judge me :P), and am interested in working with some of the associated Microsoft equivalents. The machine currently has the Ubuntu install, as well as Windows 7 Ultimate. I do all of my actual development work off my laptop, also running Windows 7 Ultimate. I was wondering what software you would recommend putting on the machine. I’m not actually serving anything off the machine itself, but in Ubuntu I had it doing integration tests with Hudson on every commit, and profiling my applications, etc, etc. The machine would be running headless, and I would remote into it. Here is what I am currently leaning towards / wondering about: Windows 7 Ultimate vs Windows Server 2008 (R2) (no one is really clear why I should go with one over the other) Windows Team Foundation Sharepoint (Never used it before, kind of meh about it) IBM Websphere or Glassfish (Some Java EE web server) SQL Server 2008 A DVCS In order to better control product conflicts / limit resource use, I’m wondering if I should install things into virtual machines (I can get VmWare or Microsoft Virtualization Products) I also plan on installing everything I had running under Linux (it’s almost entirely Java based development software, so it’ll run on both, only reason I went with ubuntu during the year was because the apache build seemed better). I’m primarily looking to become familiar with enterprise software development tools, as well as get something functional that will help my development process. (IE, I’ll still use project and assign tasks even though I might be the only one to assign tasks to, just to practice doing so). Is there any other software / configuration details I should explore? Opinions on my current list? I primarily use C#, Java, and PHP. I'm familiar with ruby, and python as well. Thanks!

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• Proper HTML technique to create an web form out of an image

  - by Lars

  I plan to create an interactive golf score card for my website (XHTML). (Btw. thats how such a scorecard looks like: ScoreCard). So at the end one should be able to insert a score for each hole in the appropriated input field in the virtual scorecard on the website. For me it is very important that the interactive scorecard really looks the same as the original (paper-) scorecard does and so my first approach was to scan and slice the scorecard image to reach that appearance. Here you can see the way I sliced the image: The idea was to insert HTML text input for each score field ending up with something like this: After I sliced the image I reconstructed it using the HTML . To do that I put the image slices as the cell background. <table> <tr> <td style="background: url("slice1.jpg") width="58px" height="25px"> <input type="text"></inputText> </td> </tr> ... </table> At the first moment this worked fine (as Gimp offers quite a nice feature for this). Then the problem was that I had to create a HTML table to create the exact layout. As you can see the lower part of the layout is split up into 3 columns. The middle column is split up into several (for each hole) rows. So the left and right column have to be spanned over those rows. Ok finally that worked, but it lead to some kind of scaling problem. If I zoom in or out on the table the middle column (and only that one) is not scaled the right way. Iam not able to fix this, and so I start doubting if this is the right technique for html image virtualization. Iam really no specialist in the area of creating websites, so I would really appriciate any help on this. Maybe there is a complete other and better technique to do that, as I think it is a common job in webcreation. I couldnt find any nice examples or tuts on that.

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• Should I create a unique clustered index, or non-unique clustered index on this SQL 2005 table?

  - by Bremer

  I have a table storing millions of rows. It looks something like this: Table_Docs ID, Bigint (Identity col) OutputFileID, int Sequence, int …(many other fields) We find ourselves in a situation where the developer who designed it made the OutputFileID the clustered index. It is not unique. There can be thousands of records with this ID. It has no benefit to any processes using this table, so we plan to remove it. The question, is what to change it to… I have two candidates, the ID identity column is a natural choice. However, we have a process which does a lot of update commands on this table, and it uses the Sequence to do so. The Sequence is non-unique. Most records only contain one, but about 20% can have two or more records with the same Sequence. The INSERT app is a VB6 piece of crud throwing thousands insert commands at the table. The Inserted values are never in any particular order. So the Sequence of one insert may be 12345, and the next could be 12245. I know that this could cause SQL to move a lot of data to keep the clustered index in order. However, the Sequence of the inserts are generally close to being in order. All inserts would take place at the end of the clustered table. Eg: I have 5 million records with Sequence spanning 1 to 5 million. The INSERT app will be inserting sequence’s at the end of that range at any given time. Reordering of the data should be minimal (tens of thousands of records at most). Now, the UPDATE app is our .NET star. It does all UPDATES on the Sequence column. “Update Table_Docs Set Feild1=This, Field2=That…WHERE Sequence =12345” – hundreds of thousands of these a day. The UPDATES are completely and totally, random, touching all points of the table. All other processes are simply doing SELECT’s on this (Web pages). Regular indexes cover those. So my question is, what’s better….a unique clustered index on the ID column, benefiting the INSERT app, or a non-unique clustered index on the Sequence, benefiting the UPDATE app?

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• Can MySQL reasonably perform queries on billions of rows?

  - by haxney

  I am planning on storing scans from a mass spectrometer in a MySQL database and would like to know whether storing and analyzing this amount of data is remotely feasible. I know performance varies wildly depending on the environment, but I'm looking for the rough order of magnitude: will queries take 5 days or 5 milliseconds? Input format Each input file contains a single run of the spectrometer; each run is comprised of a set of scans, and each scan has an ordered array of datapoints. There is a bit of metadata, but the majority of the file is comprised of arrays 32- or 64-bit ints or floats. Host system |----------------+-------------------------------| | OS | Windows 2008 64-bit | | MySQL version | 5.5.24 (x86_64) | | CPU | 2x Xeon E5420 (8 cores total) | | RAM | 8GB | | SSD filesystem | 500 GiB | | HDD RAID | 12 TiB | |----------------+-------------------------------| There are some other services running on the server using negligible processor time. File statistics |------------------+--------------| | number of files | ~16,000 | | total size | 1.3 TiB | | min size | 0 bytes | | max size | 12 GiB | | mean | 800 MiB | | median | 500 MiB | | total datapoints | ~200 billion | |------------------+--------------| The total number of datapoints is a very rough estimate. Proposed schema I'm planning on doing things "right" (i.e. normalizing the data like crazy) and so would have a runs table, a spectra table with a foreign key to runs, and a datapoints table with a foreign key to spectra. The 200 Billion datapoint question I am going to be analyzing across multiple spectra and possibly even multiple runs, resulting in queries which could touch millions of rows. Assuming I index everything properly (which is a topic for another question) and am not trying to shuffle hundreds of MiB across the network, is it remotely plausible for MySQL to handle this? UPDATE: additional info The scan data will be coming from files in the XML-based mzML format. The meat of this format is in the <binaryDataArrayList> elements where the data is stored. Each scan produces = 2 <binaryDataArray> elements which, taken together, form a 2-dimensional (or more) array of the form [[123.456, 234.567, ...], ...]. These data are write-once, so update performance and transaction safety are not concerns. My naïve plan for a database schema is: runs table | column name | type | |-------------+-------------| | id | PRIMARY KEY | | start_time | TIMESTAMP | | name | VARCHAR | |-------------+-------------| spectra table | column name | type | |----------------+-------------| | id | PRIMARY KEY | | name | VARCHAR | | index | INT | | spectrum_type | INT | | representation | INT | | run_id | FOREIGN KEY | |----------------+-------------| datapoints table | column name | type | |-------------+-------------| | id | PRIMARY KEY | | spectrum_id | FOREIGN KEY | | mz | DOUBLE | | num_counts | DOUBLE | | index | INT | |-------------+-------------| Is this reasonable?

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• PHP MySQL Zend-ACL - Find all inherited items (Children / Parents)

  - by Scoobler

  I have one MySQL DB table like the following, the resources table: id | name | type 1 | guest | user 2 | member | user 3 | moderator | user 4 | owner | user 5 | admin | user 6 | index | controller Onto the next table, the rules table: id | user_id | rule | resource_id | extras 1 | 2 | 3 | 1 | null 2 | 3 | 3 | 2 | null 3 | 4 | 3 | 3 | null 4 | 5 | 3 | 4 | null 5 | 6 | 1 | 1 | index,login,register 6 | 6 | 2 | 2 | login,register 7 | 6 | 1 | 2 | logout OK, sorry for the length, but I am trying to give a full picture of what I am trying to do. So the way it works, a role (aka user) can be granted (rule: 1) access to a controller, a role can inherit (rule: 3) access from another role or a role and be denied (rule: 2) access to a controller. (A user is a resource and a controller is a resource) Access to actions are granted / denied using the extras column. This all works, its not a problem with setting up the ACL within zend. What I am now trying to do is show the relationships; to do that I need to find the lowest level a role is granted access to a controller stopping if it has explicitly been removed. I plan on listing the roles. When I click a role, I want it to show all the controllers that role has access to. Then clicking on a controller shows the actions the role is allowed to do. So in the example above, a guest is allowed to view the index action of the index controller along with the login action. A member inherits the same access, but is then denied access to the login action and register action. A moderator inherits the rules of a member. So if I were to select the role moderator. I want to see the controller index listed. If I click on the controller, it should show the allowed actions as being action: index. (which was originally granted to the guest, but hasn't since been dissallowed) Is there any examples to doing this. I am obviously working with the Zend MVC (PHP) and MySQL. Even just a persudo code example would be a helpful starting point - this is one of the last parts of the jigsaw I am putting together. P.S. Obviously I have the ACL object - is it going to be easier to interigate that or is it better to do it my self via PHP/MySQL? The aim will be, show what a role can access which will then allow me to add or edit a role, controller and action in a GUI style (that is somewhat the easy bit) - currently I am updating the DB manually as I have been building the site.

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• Multi domain rails app. How to intelligently use MVC?

  - by denial

  Background: We have app a, b, and plan to add more apps into this same application. The apps are similar enough they could share many views, assets, and actions. Currently a,b live in a single rails app(2.3.10). c will be similar enough that it could also be in this rails app. The problem: As we continue to add more apps to this one app, there's going to be too much case logic that the app will soon become a nightmare to maintain. There will also be potential namespace issues. However, the apps are very similar in function and layout, it also makes sense to keep them in one app so that it's one app to maintain(since roughly 50% of site look/functionality will be shared). What we are trying to do is keep this as clean as possible so it's easy for multiple teams to work on and easy to maintain. Some things we've thought about/are trying: Engines. Make each app an engine. This would let us base routes on the domain. It also allows us to pull out controllers, models and views for the specific app. This solution does not seem ideal as we won't be reusing the apps any time soon. And explicitly stating the host in the routes doesn't seem right. Skinning/themes. The auth logic would be different between the apps. Each user model would be different. So it's not just a skinning problem. In app/view add folder sitea for sitea views, siteb for siteb views and so on. Do the same for controllers and models. This is still pretty messy and since it didn't follow naming conventions, it did not work with rails so nicely and made much of the code messier. Making another rails app. We just didn't want to maintain the same controller or view in 2 apps if they are identical. What we want to do is make the app intelligently use a controller based on the host. So there would be a sessions controller for each app, and perhaps some parent session controller for shared logic(not needed now). In each of these session controllers, it handles authentication for that specific app. So if the domain is a.mysite.com, it would use session controller for app a and know to use app a's views,models,controllers. And if the domain is b.mysite, it would use the session controller for b. And there would be a user model for a and user model for b, which also would be determined by the domain. Does anyone have any suggestions or experience with this situation? And ideally using rails 2.3.x as updating to rails 3 isn't an option right now.

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• Moving Function With Arguments To RequireJS

  - by Jazimov

  I'm not only relatively new to JavaScript but also to RequireJS (coming from string C# background). Currently on my web page I have a number of JavaScript functions. Each one takes two arguments. Imagine that they look like this: functionA(x1, y1) { ... } functionB(x2, y2) { ... } functionC(x3, y3) { ... } Currently, these functions exist in a tag on my HTML page and I simply call each as needed. My functions have dependencies on KnockoutJS, jQuery, and some other JS libraries. I currently have Script tags that synchronously load those external .js dependencies. But I want to use RequireJS so that they're loaded asynchronously, as needed. To do this, I plan to move all three functions above into an external .js file (a type of AMD "module") called MyFunctions.js. That file will have a define() call (to RequireJS's define function) that will look something like this: define(["knockout", "jquery", ...], function("ko","jquery", ...) {???} ); My question is how to "wrap" my functionA, functionB, and functionC functions where the ??? is above so that I can use those functions on my page as needed. For example, in the onclick event handler for a button on my HTML page, I would want to call functionA and pass two it two arguments; same for functionB and functionC. I don't fully understand how to expose those functions when they're wrapped in a define that itself is located in an external .js file. I know that define assures that my listed libraries are loaded asynchronously before the callback function is called, but after that's done I don't understand how the web page's script tags would use my functions. Would I need to use require to ensure they're available, such as: require(["myfunctions"],function({not sure what to put here})] I think I understand the basics of RequireJS but I don't understand how to wrap my functions so that they're in external .js files, don't pollute the global namespace, and yet can still be called from the main page so that arguments can be passed to them. I imagine they're are many ways to do this but in reviewing the RequireJS docs and some videos out there, I can't say I understand how... Thank you for any help.

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• When may I ask a question to fellow developers? (Rules before asking questions).

  - by Zwei Steinen

  I assigned a quite simple task to one junior developer today, and he kept pinging me EVERY 5 minutes for HOURS, asking STEP BY STEP, what to do. Whenever something went wrong, he simply copy&pasted the log and basically wrote, "An exception occurred. What should I do?" So I finally had to tell him, "If you want to be a developer, please start thinking a little bit. Read the error message. That's what they are for!". I also however, tell junior developers to ask questions before spending too much time trying to solve it themselves. This might sound contradictory, but I feel there is some kind of an implicit rule that distinguishes questions that should be asked fairly quickly and that should not (and I try to follow those rules when I ask questions..) So my question is, do you have any rules that you follow, or expect others to follow on asking questions? If so, what are they? Let me start with my own. If you have struggled for more than 90 min, you may ask that question (exceptions exists). If you haven't struggled for more than 15 min, you may not ask that question (if you are sure that the answer can not be found within 15 min, this rule does not have to apply). If it is completely out of your domain and you do not plan to learn that domain, you may ask that question after 15 min (e.g. if I am a java programmer and need to back up the DB, I may ask the DBA what procedure to follow after googling for 15 min). If it is a "local" question, whose answer is difficult to derive or for which resources is difficult to get (e.g. asking an colleague "what method xxx does" etc.), you may ask that question after 15 min. If the answer for it is difficult to derive, and you know that the other person knows the answer, you may ask the question after 15 min (e.g. asking a hibernate expert "What do I need to change else to make this work?". If the process to derive the answer is interesting and is a good learning opportunity, you may ask for hints but you may not ask for answers! What are your rules?

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• Firefox can not layout nested tables properly?

  - by ooplidi

  I want to implement a collapsible menu. I plan to use table component to simulate a menu, and nest a sub table into a table cell to simulate a sub menu. Below is my code, it works as expected in IE, Chrome and Safari, but it doesn't work well in Firefox: <html> <body> <div id="menu" style="position:absolute; left:150px; top:100px; z-index:1"> <table width="200px" height="90" border=1 cellpadding="0" cellspacing="0"> <tr> <td colspan=2>Money</td> </tr> <tr> <td colspan=2>Tool</td> </tr> <tr> <td>Food <table style="position:absolute; left:200px; top:60px; z-index:1" width="200px" height="60px" border="1" cellpadding="0" cellspacing="0"> <tr> <td>Cookie</td> </tr> <tr> <td>Fruit <table style="position:absolute; left:200px; top:30px; z-index:1" width="200px" height="60px" border="1" cellpadding="0" cellspacing="0"> <tr> <td>Apple</td> </tr> <tr> <td>Banana</td> </tr> </table> </td> </tr> </table> </td> </tr> </table> </div> </body> </html> It seems that Firefox think the "left" and "top" attribute for the level 3 menu is relative to the level 1 menu, so it layout the level 3 menu incorrectly. Other browsers will calculate the offset base on the level 2 menu, that works as expected. Is it a bug in Firefox? If so how can I work around it? I want my code to have the same behavior in all major browsers.

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• Authenticating users in iPhone app

  - by Myron

  I'm developing an HTTP api for our web application. Initially, the primary consumer of the API will be an iPhone app we're developing, but I'm designing this with future uses in mind (such as mobile apps for other platforms). I'm trying to decide on the best way to authenticate users so they can access their accounts from the iPhone. I've got a design that I think works well, but I'm no security expert, so I figured it would be good to ask for feedback here. The design of the user authentication has 3 primary goals: Good user experience: We want to allow users to enter their credentials once, and remain logged in indefinitely, until they explicitly log out. I would have considered OAuth if not for the fact that the experience from an iPhone app is pretty awful, from what I've heard (i.e. it launches the login form in Safari, then tells the user to return to the app when authentication succeeds). No need to store the user creds with the app: I always hate the idea of having the user's password stored in either plain text or symmetrically encrypted anywhere, so I don't want the app to have to store the password to pass it to the API for future API requests. Security: We definitely don't need the intense security of a banking app, but I'd obviously like this to be secure. Overall, the API is REST-inspired (i.e. treating URLs as resources, and using the HTTP methods and status codes semantically). Each request to the API must include two custom HTTP headers: an API Key (unique to each client app) and a unique device ID. The API requires all requests to be made using HTTPS, so that the headers and body are encrypted. My plan is to have an api_sessions table in my database. It has a unique constraint on the API key and unique device ID (so that a device may only be logged into a single user account through a given app) as well as a foreign key to the users table. The API will have a login endpoint, which receives the username/password and, if they match an account, logs the user in, creating an api_sessions record for the given API key and device id. Future API requests will look up the api_session using the API key and device id, and, if a record is found, treat the request as being logged in under the user account referenced by the api_session record. There will also be a logout API endpoint, which deletes the record from the api_sessions table. Does anyone see any obvious security holes in this?

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• Calendar Day View in PHP

  - by JamesArmes

  I'm working on adding a day view option to an existing calendar solution. Like many people implementing their own calendars, I am trying to model Google Calendars. They have an excellent calendar solution and their day view provides a lot of flexibility. For most part, the implementation is going well; however, I'm having issues when it comes to conflicting events. Essentially, I want the events to share the same space, side by side. Events that start at the same time should have the longest event first. In the example data set I'm working with, I have four events: A: 10:30 - 11:30 B: 13:30 - 14:30 C: 10:30 - 11:00 D: 10:45 - 14:00 I can handle A, C, and D just fine, the problem comes with D. A should be left of C which should be left of D; each taking one third of the width (it's fixed width so I can do simple math to figure that out). The problem is that B should be under A and C, to the left of D. Ideally, B would take up the same amount of space as A and C (two thirds width), but I would even settle for it only taking up only one third width. My array of events looks similar to the following: $events = array( '1030' => array( 'uniqueID1' => array( 'start_time' => '1030', 'end_time' => '1130', ), 'uniqueID2' => array( 'start_time' => '1030', 'end_time' => '1100', ), ), '1045' => array( 'uniqueID3' => array( 'start_time' => '1045', 'end_time' => '1400', ), ), '1330' => array( 'uniqueID3' => array( 'start_time' => '1330', 'end_time' => '1430', ), ), ); My plan is to add some indexes to each event that include how many events it conflicts with (so I can calculate the width) and which position in that series it should be (so I can calculate the left value). However, that doesn't help the B. I'm thinking I might need an algorithm that uses some basic geometry and matrices, but I'm not sure where to begin. Any help is greatly appreciated.

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• Allow users to pull temporary data then delete table?

  - by JM4

  I don't know the best way to title this question but am trying to accomplish the following goal: When a client logs into their profile, they are presented with a link to download data from an existing database in CSV format. The process works, however, I would like for this data to be 'fresh' each time they click the link so my plan was - once a user has clicked the link and downloaded the CSV file, the database table would 'erase' all of its data and start fresh (be empty) until the next set of data populated it. My EXISTING CSV creation code: <?php $host = 'localhost'; $user = 'username'; $pass = 'password'; $db = 'database'; $table = 'tablename'; $file = 'export'; $link = mysql_connect($host, $user, $pass) or die("Can not connect." . mysql_error()); mysql_select_db($db) or die("Can not connect."); $result = mysql_query("SHOW COLUMNS FROM ".$table.""); $i = 0; if (mysql_num_rows($result) > 0) { while ($row = mysql_fetch_assoc($result)) { $csv_output .= $row['Field'].", "; $i++; } } $csv_output .= "\n"; $values = mysql_query("SELECT * FROM ".$table.""); while ($rowr = mysql_fetch_row($values)) { for ($j=0;$j<$i;$j++) { $csv_output .= '"'.$rowr[$j].'",'; } $csv_output .= "\n"; } $filename = $file."_".date("Y-m-d",time()); header("Content-type: application/vnd.ms-excel"); header("Content-disposition: csv" . date("Y-m-d") . ".csv"); header( "Content-disposition: filename=".$filename.".csv"); print $csv_output; exit; ?> any ideas?

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• rake db:create not working for legacy rails app (2.3.5) using MySQL (5.5.28)

  - by ridicter

  I'm a new Rails Developer, and I'm working on a legacy Rails app. Whenever I run the rake db:create command, I get an error that the database couldn't be created. I have found many StackOverflow questions related to this, but in troubleshooting nearly all permutations of solutions, I couldn't resolve the issue. I created the three Dbs (dev, prod, test), created the user with all access privileges to these dbs, and ran rake db:create. I'm running Mac OS X Lion, MySQL 5.5.28, Rails 2.3.5, Ruby 1.8.7. Here are my settings development: adapter: mysql encoding: utf8 database: adva_development username: adva password: **** host: localhost socket: /tmp/mysql.sock Here's the error: Couldn't create database for {"adapter"=>"mysql", "username"=>"adva", "host"=>"localhost", "encoding"=>"utf8", "database"=>"adva_development", "socket"=>"/tmp/mysql.sock", "password"=>"****"}, charset: utf8, collation: utf8_unicode_ci (if you set the charset manually, make sure you have a matching collation) I have done the following troubleshooting: Verified user and password are correct, and the user has access to the DB. (Double checked user access with SELECT * FROM mysql.db WHERE Db = 'adva_development' \G; User has all privileges.) Verify the socket is correct. I don't really understand sockets, but I can plainly see it at /tmp/mysql.sock. Checked collation and character set. I found out I had created the DB in latin charset and collation, so I recreated them. I ran show variables like "collation_database"; and show variables like "character_set_database"; and came back with utf8 and utf8_unicode_ci respectively. I followed the instructions in this question. After uninstalling mysql gem, I ran the following but came up with the same error: gem install --no-rdoc --no-ri mysql -- --with-mysql-dir=/usr/local/mysql-5.5.28-osx10.6-x86_64/bin --with-mysql-config=/usr/local/mysql-5.5.28-osx10.6-x86_64/bin/mysql_config Following Matt's suggestion, here's what a rake --trace db:create reveals: ** Invoke db:create (first_time) ** Invoke db:load_config (first_time) ** Invoke rails_env (first_time) ** Execute rails_env ** Execute db:load_config ** Execute db:create Couldn't create database for {"database"=>"adva_development", "adapter"=>"mysql", "host"=>"127.0.0.1", "password"=>"woof2adva", "username"=>"adva", "encoding"=>"utf8"}, charset: utf8, collation: utf8_unicode_ci (if you set the charset manually, make sure you have a matching collation) After 3 days and six or seven hours, I have pretty much run out of options. I tried various random things, like replacing localhost with 127.0.0.1 to no avail. Could there be something wrong related to my specific environment? Mac OS X Lion + MySQL 5.5.28? I plan on trying on setting up everything in a Linux environment. Thanks!

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• Allow users to pull temporary data then delete table data (headers remain)?

  - by JM4

  I don't know the best way to title this question but am trying to accomplish the following goal: When a client logs into their profile, they are presented with a link to download data from an existing database in CSV format. The process works, however, I would like for this data to be 'fresh' each time they click the link so my plan was - once a user has clicked the link and downloaded the CSV file, the database table would 'erase' all of its data and start fresh (be empty) until the next set of data populated it. My EXISTING CSV creation code: <?php $host = 'localhost'; $user = 'username'; $pass = 'password'; $db = 'database'; $table = 'tablename'; $file = 'export'; $link = mysql_connect($host, $user, $pass) or die("Can not connect." . mysql_error()); mysql_select_db($db) or die("Can not connect."); $result = mysql_query("SHOW COLUMNS FROM ".$table.""); $i = 0; if (mysql_num_rows($result) > 0) { while ($row = mysql_fetch_assoc($result)) { $csv_output .= $row['Field'].", "; $i++; } } $csv_output .= "\n"; $values = mysql_query("SELECT * FROM ".$table.""); while ($rowr = mysql_fetch_row($values)) { for ($j=0;$j<$i;$j++) { $csv_output .= '"'.$rowr[$j].'",'; } $csv_output .= "\n"; } $filename = $file."_".date("Y-m-d",time()); header("Content-type: application/vnd.ms-excel"); header("Content-disposition: csv" . date("Y-m-d") . ".csv"); header( "Content-disposition: filename=".$filename.".csv"); print $csv_output; exit; ?> any ideas?

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• Boost MultiIndex - objects or pointers (and how to use them?)?

  - by Sarah

  I'm programming an agent-based simulation and have decided that Boost's MultiIndex is probably the most efficient container for my agents. I'm not a professional programmer, and my background is very spotty. I've two questions: Is it better to have the container contain the agents (of class Host) themselves, or is it more efficient for the container to hold Host *? Hosts will sometimes be deleted from memory (that's my plan, anyway... need to read up on new and delete). Hosts' private variables will get updated occasionally, which I hope to do through the modify function in MultiIndex. There will be no other copies of Hosts in the simulation, i.e., they will not be used in any other containers. If I use pointers to Hosts, how do I set up the key extraction properly? My code below doesn't compile. // main.cpp - ATTEMPTED POINTER VERSION ... #include <boost/multi_index_container.hpp> #include <boost/multi_index/hashed_index.hpp> #include <boost/multi_index/member.hpp> #include <boost/multi_index/ordered_index.hpp> #include <boost/multi_index/mem_fun.hpp> #include <boost/tokenizer.hpp> typedef multi_index_container< Host *, indexed_by< // hash by Host::id hashed_unique< BOOST_MULTI_INDEX_MEM_FUN(Host,int,Host::getID) > // arg errors here > // end indexed_by > HostContainer; ... int main() { ... HostContainer testHosts; Host * newHostPtr; newHostPtr = new Host( t, DOB, idCtr, 0, currentEvents ); testHosts.insert( newHostPtr ); ... } I can't find a precisely analogous example in the Boost documentation, and my knowledge of C++ syntax is still very weak. The code does appear to work when I replace all the pointer references with the class objects themselves. As best I can read it, the Boost documentation (see summary table at bottom) implies I should be able to use member functions with pointer elements.

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• Getting TF215097 error after modifying a build process template in TFS Team Build 2010

  - by Jakob Ehn

  When embracing Team Build 2010, you typically want to define several different build process templates for different scenarios. Common examples here are CI builds, QA builds and release builds. For example, in a contiuous build you often have no interest in publishing to the symbol store, you might or might not want to associate changesets and work items etc. The build server is often heavily occupied as it is, so you don’t want to have it doing more that necessary. Try to define a set of build process templates that are used across your company. In previous versions of TFS Team Build, there was no easy way to do this. But in TFS 2010 it is very easy so there is no excuse to not do it! :-)   I ran into a scenario today where I had an existing build definition that was based on our release build process template. In this template, we have defined several different build process parameters that control the release build. These are placed into its own sectionin the Build Process Parameters editor. This is done using the ProcessParameterMetadataCollection element, I will explain how this works in a future post.   I won’t go into details on these parametes, the issue for this blog post is what happens when you modify a build process template so that it is no longer compatible with the build definition, i.e. a breaking change. In this case, I removed a parameter that was no longer necessary. After merging the new build process template to one of the projects and queued a new release build, I got this error:   TF215097: An error occurred while initializing a build for build definition <Build Definition Name>: The values provided for the root activity's arguments did not satisfy the root activity's requirements: 'DynamicActivity': The following keys from the input dictionary do not map to arguments and must be removed: <Parameter Name>.  Please note that argument names are case sensitive. Parameter name: rootArgumentValues <Parameter Name> was the parameter that I removed so it was pretty easy to understand why the error had occurred. However, it is not entirely obvious how to fix the problem. When open the build definition everything looks OK, the removed build process parameter is not there, and I can open the build process template without any validation warnings. The problem here is that all settings specific to a particular build definition is stored in the TFS database. In TFS 2005, everything that was related to a build was stored in TFS source control in files (TFSBuild.proj, WorkspaceMapping.xml..). In TFS 2008, many of these settings were moved into the database. Still, lots of things were stored in TFSBuild.proj, such as the solution and configuration to build, wether to execute tests or not. In TFS 2010, all settings for a build definition is stored in the database. If we look inside the database we can see what this looks like. The table tbl_BuildDefinition contains all information for a build definition. One of the columns is called ProcessParameters and contains a serialized representation of a Dictionary that is the underlying object where these settings are stoded. Here is an example:   <Dictionary x:TypeArguments="x:String, x:Object" xmlns="clr-namespace:System.Collections.Generic;assembly=mscorlib" xmlns:mtbwa="clr-namespace:Microsoft.TeamFoundation.Build.Workflow.Activities;assembly=Microsoft.TeamFoundation.Build.Workflow" xmlns:x="http://schemas.microsoft.com/winfx/2006/xaml"> <mtbwa:BuildSettings x:Key="BuildSettings" ProjectsToBuild="$/PathToProject.sln"> <mtbwa:BuildSettings.PlatformConfigurations> <mtbwa:PlatformConfigurationList Capacity="4"> <mtbwa:PlatformConfiguration Configuration="Release" Platform="Any CPU" /> </mtbwa:PlatformConfigurationList> </mtbwa:BuildSettings.PlatformConfigurations> </mtbwa:BuildSettings> <mtbwa:AgentSettings x:Key="AgentSettings" Tags="Agent1" /> <x:Boolean x:Key="DisableTests">True</x:Boolean> <x:String x:Key="ReleaseRepositorySolution">ERP</x:String> <x:Int32 x:Key="Major">2</x:Int32> <x:Int32 x:Key="Minor">3</x:Int32> </Dictionary> Here we can see that it is really only the non-default values that are persisted into the databasen. So, the problem in my case was that I removed one of the parameteres from the build process template, but the parameter and its value still existed in the build definition database. The solution to the problem is to refresh the build definition and save it. In the process tab, there is a Refresh button that will reload the build definition and the process template and synchronize them:   After refreshing the build definition and saving it, the build was running successfully again.

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