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  • Unable to plot graph using matplotlib

    - by Aman Deep Gautam
    I have the following code which searches all the directory in the current directory and then takes data from those files to plot the graph. The data is read correctly as verified by printing but there are no points plotted on graph. import argparse import os import matplotlib.pyplot as plt #find the present working directory pwd=os.path.dirname(os.path.abspath(__file__)) #find all the folders in the present working directory. dirs = [f for f in os.listdir('.') if os.path.isdir(f)] plt.figure() plt.xlim(0, 20000) plt.ylim(0, 1) for directory in dirs: os.chdir(os.path.join(pwd, directory)); chd_dir = os.path.dirname(os.path.abspath(__file__)) files = [ fl for fl in os.listdir('.') if os.path.isfile(fl) ] print files for f in files: f_obj = open(os.path.join(chd_dir, f), 'r') list_x = [] list_y = [] for i in xrange(0,4): f_obj.next() for line in f_obj: temp_list = line.split() print temp_list list_y.append(temp_list[0]) list_x.append(temp_list[1]) print 'final_lsit' print list_x print list_y plt.plot(list_x, list_y, 'r.') f_obj.close() os.chdir(pwd) plt.savefig("test.jpg") The input files look like the following: 5 865 14709 15573 14709 1.32667e-06 664 0.815601 14719 1.55333e-06 674 0.813277 14729 1.82667e-06 684 0.810185 14739 1.4e-06 694 0.808459 Can anybody help me with why this is happening? Being new I would like to know some tutorial where I can get help with kind of plotting as the tutorial I was following made me end up here. Any help appreciated.

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  • Shuttle control in wxPython

    - by Mridang Agarwalla
    Hi, I'm trying to implement a shuttle control in wxPython but there doesn't seem to be one. I've decided to use two listbox controls. The shuttle control looks like this: I've got two listboxes — one's populated, one's not. Could someone show me how to add a selected item to the second list box when it is double clicked? It should be removed from the first. When it is double clicked in the second, it should be added to the first and removed from the second. The shuttle control implements these by default but it's a pity it isn't there. Thank you.

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  • Function for averages of tuples in a dictionary

    - by Billy Mann
    I have a string, dictionary in the form: ('the head', {'exploded': (3.5, 1.0), 'the': (5.0, 1.0), "puppy's": (9.0, 1.0), 'head': (6.0, 1.0)}) Each parentheses is a tuple which corresponds to (score, standard deviation). I'm taking the average of just the first integer in each tuple. I've tried this: def score(string, d): for word in d: (score, std) = d[word] d[word]=float(score),float(std) if word in string: word = string.lower() number = len(string) return sum([v[0] for v in d.values()]) / float(len(d)) if len(string) == 0: return 0 When I run: print score('the head', {'exploded': (3.5, 1.0), 'the': (5.0, 1.0), "puppy's": (9.0, 1.0), 'head': (6.0, 1.0)}) I should get 5.5 but instead I'm getting 5.875. Can't figure out what in my function is not allowing me to get the correct answer.

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  • Django dictionary in templates: Grab key from another objects attribute

    - by Jordan Messina
    I have a dictionary called number_devices I'm passing to a template, the dictionary keys are the ids of a list of objects I'm also passing to the template (called implementations). I'm iterating over the list of objects and then trying to use the object.id to get a value out of the dict like so: {% for implementation in implementations %} {{ number_devices.implementation.id }} {% endfor %} Unfortunately number_devices.implementation is evaluated first, then the result.id is evaluated obviously returning and displaying nothing. I can't use parentheses like: {{ number_devices.(implementation.id) }} because I get a parse error. How do I get around this annoyance in Django templates? Thanks for any help!

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  • supervisord environment variables setting up application

    - by user1434844
    I'm running an application from supervisord and I have to set up an environment for it. There are about 30 environment variables that need to be set. I've tried putting all on one big environment= line and that doesn't seem to work. I've also tried multiple enviroment= lines, and that doesn't seem to work either. I've also tried both with and without ' around the env value. What's the best way to set up my environment such that it remains intact under supervisord control? Should I be calling my actual program (tornado, fwiw) from a shell script with the environment preloaded there? Ideally, I'd like to put all of the enviroment variables into an include file and load them with supervisor, but I'm open to doing it another way.

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  • Problem with sys.argv[1] when unittest module is in a script

    - by chrissygormley
    Hello, I have a script that does various things and access paramenters using sys.argv but when the script gets to the unittest part of the code it says there is no module for this. The script that I have is: class MyScript(): def __init__(self): self.value = sys.argv[1] def hello(self): print self.value def suite(self): modules_to_test = ('external_sanity_onvif', 'starttest') alltests = unittest.TestSuite() for module in map(__import__, modules_to_test): alltests.addTest(unittest.findTestCases(module)) return alltests if __name__ == '__main__': Run = MyScript() Run.hello() log_file = 'log_file.txt' test_file = open(log_file, "w") runner = unittest.TextTestRunner(test_file) unittest.main(defaultTest='Run.suite', testRunner=runner) Say I enter ./script.py Hello in the command line. The error I get is: AttributeError: 'module' object has no attribute 'Hello' If I remove the unittest module it works. Also if I remove the testrunner log and leave it at: unittest.main(defaultTest='Run.suite') This still doesn't work. Can anyone help. Thanks

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  • Character Sets explained for Dummies!

    - by Imran
    I don't think i fully understand character sets so i was wondering if anyone would be kind enough to explain it in layman's terms with examples ( for Dummies).I know there is utf8, latin1, ascii ect The more answers the better really. Thank you in advance;-)

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  • Wordpress & Django -- One domain, two servers. Possible?

    - by DomoDomo
    My question is about hosting Django and Wordpress under one domain, but two physical machines (actually, they are VMs but same diff). Let's say I have a Django webapp at example.com. I'd like to start a Wordpress blog about my webapp, so any blog page rank mojo flows back to my webapp, I'd like the blog address t be example.com/blog. My understanding is blog.example.com would not transfer said page rank mojo. Because I'm worried about Wordpress security flaws compromising my Django webapp, I want to host Django and Wordpress on two physically separate machines. Given all that, is it possible using re-write rules or a reverse proxy server to do this? I know the easy way is to make my Wordpress blog a subdomain, but I really don't want to do that. Has anyone done this in the past, is it stable? If I need a third server to be a dedicated reverse proxy, that's totally fine. Thanks!

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  • SQLAlchemy sessions - DetachedInstanceError?

    - by benjaminhkaiser
    I have a function that attempts to take a list of usernames, look each one up in a user table, and then add them to a membership table. If even one username is invalid, I want the entire list to be rolled back, including any users that have already been processed. I thought that using sessions was the best way to do this but I'm running into a DetachedInstanceError: DetachedInstanceError: Instance <Organization at 0x7fc35cb5df90> is not bound to a Session; attribute refresh operation cannot proceed Full stack trace is here. The error seems to trigger when I attempt to access the user (model) object that is returned by the query. From my reading I understand that it has something to do with there being multiple sessions, but none of the suggestions I saw on other threads worked for me. Code is below: def add_members_in_bulk(organization_eid, users): """Add users to an organization in bulk - helper function for add_member()""" """Returns "success" on success and id of first failed student on failure""" session = query_session.get_session() session.begin_nested() users = users.split('\n') for u in users: try: user = user_lookup.by_student_id(u) except ObjectNotFoundError: session.rollback() return u if user: membership.add_user_to_organization( user.entity_id, organization_eid, '', [] ) session.flush() session.commit() return 'success' here's the membership.add_user_to_organization: def add_user_to_organization(user_eid, organization_eid, title, tag_ids): """Add a User to an Organization with the given title""" user = user_lookup.by_eid(user_eid) organization = organization_lookup.by_eid(organization_eid) new_membership = OrganizationMembership( organization_eid=organization.entity_id, user_eid=user.entity_id, title=title) new_membership.tags = [get_tag_by_id(tag_id) for tag_id in tag_ids] crud.add(new_membership) and here is the lookup by ID query: def by_student_id(student_id, include_disabled=False): """Get User by RIN""" try: return get_query_set(include_disabled).filter(User.student_id == student_id).one() except NoResultFound: raise ObjectNotFoundError("User with RIN %s does not exist." % student_id)

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  • Simple numpy question

    - by dassouki
    I can't get this snippet to work: #base code A = array([ [ 1, 2, 10 ], [ 1, 3, 20 ], [ 1, 4, 30 ], [ 2, 1, 15 ], [ 2, 3, 25 ], [ 2, 4, 35 ], [ 3, 1, 17 ], [ 3, 2, 27 ], [ 3, 4, 37 ], [ 4, 1, 13 ], [ 4, 2, 23 ], [ 4, 3, 33 ] ]) # Number of zones zones = unique1d(A[:,0]) for origin in zones: for destination in zones: if origin != destination: A_ik = A[(A[:,0] == origin & A[:,1] == destination), 2]

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  • Sending message from one server to another in Twisted

    - by Casey Patton
    I've implemented my servers in the following way: def makeServer(application, port): factory = protocol.ServerFactory() factory.protocol = MyChat factory.clients = [] internet.TCPServer(port, factory).setServiceParent(application) application = service.Application("chatserver") server1 = makeServer(application, port=1025) server2 = makeServer(application, port=1026) server3 = makeServer(application, port=1027) Note that MyChat is an event handling class that has a "receiveMessage" action: def lineReceived(self, line): print "received", repr(line) for c in self.factory.clients: c.transport.write(message + '\n') I want server1 to be able to pass messages to server2. Rather, I want server1 to be treated as a client of server2. If server1 receives the message "hi" then I want it to send that same exact message to server2. How can I accomplish this?

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  • Linux distro name parsing

    - by Ockonal
    Hello, I chose this way to get linux distro name: ls /etc/*release And now I have to parse it for name: /etc/<name>-release def checkDistro(): p = Popen('ls /etc/*release' , shell = True, stdout = PIPE) distroRelease = p.stdout.read() distroName = re.search( ur"\/etc\/(.*)\-release", distroRelease).group() print distroName But this prints the same string that is in distroRelease.

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  • how to detect escape characters in a string

    - by mix
    Given a string named line whose raw version has this value: \rRAWSTRING how can I detect if it has the escape character \r? What I've tried is: if repr(line).startswith('\r'): blah... but it doesn't catch it. I also tried find, such as: if repr(line).find('\r') != -1: blah doesn't work either. What am I missing? thx!

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  • Creating a Group of Groups in Django

    - by Greg
    I'm creating my own Group model; I'm not referring to the builtin Group model. I want each hroup to be a member of another group (it's parent), but there is the one "top" group that doesn't have a parent group. The admin interface won't let me create a group without entering a parent. I get the error personnel_group.parent_id may not be NULL. My Group model looks like this: class Group(models.Model): name = models.CharField(max_length=50) parent = models.ForeignKey('self', blank=True, null=True) order = models.IntegerField() icon = models.ImageField(upload_to='groups', blank=True, null=True) description = models.TextField(blank=True, null=True) How can I accomplish this? Thanks.

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  • How do I modify gitstats to only utilize a specified file extension for it's statistics?

    - by Fake Code Monkey Rashid
    Hello good people! The website of the statistics generator in question is: http://gitstats.sourceforge.net/ It's git repo can be cloned from: git clone git://repo.or.cz/gitstats.git What I want to do is something like: ./gitstatus --ext=".py" /input/foo /output/bar Failing being able to easily pass the above option without heavy modification, I'd just hardcore the file extentsion I want to be included. However, I'm unsure of the relevant section of code to modify and even if I did no, I'm unsure of how to start such modifications. It's seems like it'd be rather simple but alas...

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  • Can anyone tell me why these lines are not working?

    - by user343934
    I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO_init_.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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  • mount command pid

    - by lakshmipathi
    Trying to mount a device and get the pid of mount command. cmd="/bin/mount /dev/sda1 /mnt" os.system(cmd) Now how to obtain the pid of mount command? There plenty of mounted device available on my system ,something like ps | grep mount won't work.

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  • Update Facebook Page's status using pyfacebook

    - by thornomad
    I am attempting to add functionality to my Django app: when a new post is approved, I want to update the corresponding Facebook Page's status with a message and a link to the post automatically. Basic status update. I have downloaded and installed pyfacebook - and I have read through the tutorial from Facebook. I have also seen this suggestion here on SO: import facebook fb = facebook.Facebook('YOUR_API_KEY', 'YOUR_SECRET_KEY') fb.auth.createToken() fb.login() # THIS IS AS FAR AS I CAN GET fb.auth.getSession() fb.set_status('Checking out StackOverFlow.com') When I get to the login() call, however, pyfacebook tries to open lynx so I can login to Facebook 'via the web' -- this is, obviously, not going to work for me because the system is supposed to be automated ... I've been looking, but can't find out how I can keep this all working with the script and not having to login via a web browser. Any ideas?

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  • Append to list of lists

    - by Joel
    Hello, I am trying to build a list of lists using the following code: list=3*[[]] Now I am trying to append a string to the list in position 0: list[0].append("hello") However, instead of receiving the list [ ["hello"] , [], [] ] I am receiving the list: [ ["hello"] ,["hello"] , ["hello"] ] Am I missing something? Thanks, Joel

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  • Query for model by key

    - by Jason Hall
    What I'm trying to do is query the datastore for a model where the key is not the key of an object I already have. Here's some code: class User(db.Model): partner = db.SelfReferenceProperty() def text_message(self, msg): user = User.get_or_insert(msg.sender) if not user.partner: # user doesn't have a partner, find them one # BUG: this line returns 'user' himself... :( other = db.Query(User).filter('partner =', None).get() if other: # connect users else: # no one to connect to! The idea is to find another User who doesn't have a partner, that isn't the User we already know. I've tried filter('key !=, user.key()), filter('__key__ !=, user.key()) and a couple others, and nothing returns another User who doesn't have a partner. filter('foo !=, user.key()) also returns nothing, for the record.

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  • Django: Update order attribute for objects in a queryset

    - by lazerscience
    I'm having a attribute on my model to allow the user to order the objects. I have to update the element's order depending on a list, that contains the object's ids in the new order; right now I'm iterating over the whole queryset and set one objects after the other. What would be the easiest/fastest way to do the same with the whole queryset? def update_ordering(model, order): """ order is in the form [id,id,id,id] for example: [8,4,5,1,3] """ id_to_order = dict((order[i], i) for i in range(len(order))) for x in model.objects.all(): x.order = id_to_order[x.id] x.save()

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  • Return 0 where django quersyet is none

    - by gramware
    I have a django queryset in my views whose values I pack before passing to my template. There is a problem when the queryset returns none since associated values are not unpacked. the quersyet is called comments. Here is my views.py def forums(request ): post_list = list(forum.objects.filter(child='0')&forum.objects.filter(deleted='0').order_by('postDate')) user = UserProfile.objects.get(pk=request.session['_auth_user_id']) newpostform = PostForm(request.POST) deletepostform = PostDeleteForm(request.POST) DelPostFormSet = modelformset_factory(forum, exclude=('child','postSubject','postBody','postPoster','postDate','childParentId')) readform = ReadForumForm(request.POST) comments =list( forum.objects.filter(deleted='0').filter(child='1').order_by('childParentId').values('childParentId').annotate(y=Count('childParentId'))) if request.user.is_staff== True : staff = 1 else: staff = 0 staffis = 1 if newpostform.is_valid(): topic = request.POST['postSubject'] poster = request.POST['postPoster'] newpostform.save() return HttpResponseRedirect('/forums') else: newpostform = PostForm(initial = {'postPoster':user.id}) if request.GET: form = SearchForm(request.GET) if form.is_valid(): query = form.cleaned_data['query'] post_list = list((forum.objects.filter(child='0')&forum.objects.filter(deleted='0')&forum.objects.filter(Q(postSubject__icontains=query)|Q(postBody__icontains=query)|Q(postDate__icontains=query)))or(forum.objects.filter(deleted='0')&forum.objects.filter(Q(postSubject__icontains=query)|Q(postBody__icontains=query)|Q(postDate__icontains=query)).values('childParentId'))) if request.method == 'POST': delpostformset = DelPostFormSet(request.POST) if delpostformset.is_valid(): delpostformset.save() return HttpResponseRedirect('/forums') else: delpostformset = DelPostFormSet(queryset=forum.objects.filter(child='0', deleted='0')) """if readform.is_valid(): user=get_object_or_404(UserProfile.objects.all()) readform.save() else: readform = ReadForumForm()""" post= zip( post_list,comments, delpostformset.forms) paginator = Paginator(post, 10) # Show 10 contacts per page # Make sure page request is an int. If not, deliver first page. try: page = int(request.GET.get('page', '1')) except ValueError: page = 1 # If page request (9999) is out of range, deliver last page of results. try: post = paginator.page(page) except (EmptyPage, InvalidPage): post = paginator.page(paginator.num_pages) return render_to_response('forum.html', {'post':post, 'newpostform': newpostform,'delpost':delpostformset, 'username':user.username, 'comments':comments, 'user':user, },context_instance = RequestContext( request ))

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