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• How to figure out optimal C / Gamma parameters in libsvm?

  - by Cuga

  I'm using libsvm for multi-class classification of datasets with a large number of features/attributes (around 5,800 per each item). I'd like to choose better parameters for C and Gamma than the defaults I am currently using. I've already tried running easy.py, but for the datasets I'm using, the estimated time is near forever (ran easy.py at 20, 50, 100, and 200 data samples and got a super-linear regression which projected my necessary runtime to take years). Is there a way to more quickly arrive at better C and Gamma values than the defaults? I'm using the Java libraries, if that makes any difference.

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• how to get obj2.name via obj1.categories(), thanks (gae python)

  - by zjm1126

  i using google-app-engine webapp ,code is : class Post(db.Model): title = db.StringProperty(required=True) def categories(self): return (x.category for x in self.postcategory_set) class Category(db.Model): name = db.StringProperty() class PostCategory(db.Model): post = db.ReferenceProperty(Post) category = db.ReferenceProperty(Category) class sss(webapp.RequestHandler): def get(self): obj1 = Post(title='hhaa') #obj1.title = 'haha' obj1.put() obj2 = Category() obj2.name='haha-kao' obj2.put() obj3=PostCategory() obj3.post=obj1 obj3.category=obj2 obj3.put() self.response.out.write(obj1.categories().get().name) the error is : Traceback (most recent call last): File "D:\Program Files\Google\google_appengine\google\appengine\ext\webapp\__init__.py", line 511, in __call__ handler.get(*groups) File "D:\zjm_code\helloworld\a.py", line 131, in get self.response.out.write(obj1.categories().get().name) AttributeError: 'generator' object has no attribute 'get' so how to get the obj2.name via obj1's method thanks

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• Prevent Django from running contrib tests?

  - by David Wolever

  Is there any way to prevent ./manage.py test from running tests on installed apps like django.contrib?

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• django admin how to limit selectbox values

  - by SledgehammerPL

  model: class Store(models.Model): name = models.CharField(max_length = 20) class Admin: pass def __unicode__(self): return self.name class Stock(Store): products = models.ManyToManyField(Product) class Admin: pass def __unicode__(self): return self.name class Product(models.Model): name = models.CharField(max_length = 128, unique = True) parent = models.ForeignKey('self', null = True, blank = True, related_name='children') (...) def __unicode__(self): return self.name mptt.register(Product, order_insertion_by = ['name']) admin.py: from bar.drinkstore.models import Store, Stock from django.contrib import admin admin.site.register(Store) admin.site.register(Stock) Now when I look at admin site I can select any product from the list. But I'd like to have a limited choice - only leaves. In mptt class there's function: is_leaf_node() -- returns True if the model instance is a leaf node (it has no children), False otherwise. But I have no idea how to connect it I'm trying to make a subclass: in admin.py: from bar.drinkstore.models import Store, Stock from django.contrib import admin admin.site.register(Store) class StockAdmin(admin.ModelAdmin): def queryset(self, request): qs = super(StockAdmin, self).queryset(request).filter(ihavenoideawhatfilter) admin.site.register(Stock, StockAdmin) but I'm not sure if it's right way, and what filter set.

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• WxPython Incompatible With Snow Leopard?

  - by Alex

  Hello all, Recently I upgraded to Snow Leopard, and now I can't run programs built with wxPython. The errors I get are (from Eclipse + PyDev): import wx File "/var/tmp/wxWidgets/wxWidgets-13~231/2.6/DSTROOT/System/Library/Frameworks /Python.framework/Versions/2.6/Extras/lib/ python/wx-2.8-mac-unicode/wx/__init__.py", line 45, in <module> File "/var/tmp/wxWidgets/wxWidgets-13~231/2.6/DSTROOT /System/Library/Frameworks/Python.framework/Versions/2.6/Extras/lib /python/wx-2.8-mac-unicode/wx/_core.py", line 4, in <module> ImportError:/System/Library/Frameworks /Python.framework/Versions/2.6/Extras/lib/python /wx-2.8-mac-unicode/wx/_core_.so: no appropriate 64-bit architecture (see "man python" for running in 32-bit mode) I don't really understand them and would appreciate if you could help me to do so, also, if you do know what's going on, how can I go about fixing them? Maybe this has something to do with the fact that Snow Leopard is 64-bit? Thanks!!

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• Mixing static and dynamic endpoints in app.yaml file

  - by Greg

  I'm trying to describe endpoints in my App Engine app and am having difficulty for directory structures that mix static and dynamic content. But my yaml rules are conflicting with one another. Before I change my directory structure, does anyone have a recommendation? The goal is to create a directory that contains both documentation (static html files) and implementations. /api - /v1 - getitdone.py - doc.html - index.html What I think I should be doing with my application yaml... - url: /api/v1/getitdone script: api/v1/getitdone.py - url: /api/ static_files: api/index.html upload: api/index.html - url: /api static_dir: api But this causes the dynamic endpoints to fail. I'm assuming the static_dir reference is breaking it. How can I do this without describing every script and static file reference (I have many more than are listed here)?

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• Access to module denied from within GAE dev server

  - by Tomas Kohl

  I am developing an app for GAE. Having installed the "feedparser" module with setuptools, I tried importing it (with "import feedparser") statement. However, the module does not load and when I look at the dev_appserver.py debug log on screen, I see the following: Access to module file denied: /usr/local/lib/python2.6/dist-packages/feedparser-4.1-py2.6.egg/feedparser.py So GAE dev server cannot access the module but I can't figure out why. The path is correct and the file is accessible. I am fairly new to Python/Django/GAE - what am I missing?

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• In Django : How to serialize dict object to json ?

  - by Rohit

  I have this very basic problem, >>> serializers.serialize("json", {'a':1}) Traceback (most recent call last): File "<console>", line 1, in <module> File "/usr/lib/pymodules/python2.6/django/core/serializers/__init__.py", line 87, in serialize s.serialize(queryset, **options) File "/usr/lib/pymodules/python2.6/django/core/serializers/base.py", line 40, in serialize for field in obj._meta.local_fields: AttributeError: 'str' object has no attribute '_meta' >>> How can this be done ? Thanks in advance !

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• Debugging segfault on swig/python/c++

  - by Pradyot

  I am trying to figure out what the best way to debug a segault with swig/python/c++. A core file is being generated. I have a basic MessageFactory(defined in c++ that provides a simple interface to accept a few strings as input and return a string as output). This interface is then specified in a .i file. swig is used to generate Wrapper.cpp as well as a MessageFactory.py from the .i file. This along with supporting files is compiled into a dynamic lib. The point of failure , is when the MessageFactory is instantiated within python code. Any suggestions on how I can go about debugging this? I've tried running the script within pdb, what I know from that is import on the generated MessageFactory.py is whats causing the seg-fault.

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• A Question about using jython when run a receving socket in python

  - by abusemind

  Hi, I have not a lot of knowledge of python and network programming. Currently I am trying to implement a simple application which can receive a text message sent by the user, fetch some information from the google search api, and return the results via text message to the user. This application will continue to listening to the users messages and reply immediately. How I get the text short message sent by the user? It's a program named fetion from the mobile supplier in China. The client side fetion, just like a instant communication tool, can send/receive messages to/from other people who are using mobile to receive/send SMS. I am using a open source python program that simulates the fetion program. So basically I can use this python program to communate with others who using cell phone via SMS. My core program is based on java, so I need to take this python program into java environment. I am using jython, and now I am available to send messages to users by some lines of java codes. But the real question is the process of receving from users via SMS. In python code, a new thread is created to continuously listen to the user. It should be OK in Python, but when I run the similar process in Jython, the following exception occurs: Exception in thread Thread:Traceback (most recent call last): File "D:\jython2.5.1\Lib\threading.py", line 178, in _Thread__bootstrap self.run() File "<iostream>", line 1389, in run File "<iostream>", line 1207, in receive File "<iostream>", line 1207, in receive File "<iostream>", line 150, in recv File "D:\jython2.5.1\Lib\select.py", line 223, in native_select pobj.register(fd, POLLIN) File "D:\jython2.5.1\Lib\select.py", line 104, in register raise _map_exception(jlx) error: (20000, 'socket must be in non-blocking mode') The line 150 in the python code is as follows: def recv(self,timeout=False): if self.login_type == "HTTP": time.sleep(10) return self.get_offline_msg() pass else: if timeout: infd,outfd,errfd = select([self.__sock,],[],[],timeout)//<---line 150 here else: infd,outfd,errfd = select([self.__sock,],[],[]) if len(infd) != 0: ret = self.__tcp_recv() num = len(ret) d_print(('num',),locals()) if num == 0: return ret if num == 1: return ret[0] for r in ret: self.queue.put(r) d_print(('r',),locals()) if not self.queue.empty(): return self.queue.get() else: return "TimeOut" Because of I am not very familiar with python, especially the socket part, and also new in Jython use, I really need your help or only advice or explanation. Thank you very much!

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• Simple Java web framework

  - by Gabriel

  Is there any simple java web framework like sinatra (for ruby) or web.py (for python)?

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• simply way to add another webapp framework to my project.

  - by zjm1126

  one webapp project has many url and i have to change this: ('/addTopic', AddTopic), ('/delTopic', DeleteTopic), ('/addPost', AddPost), ('/delPost', DeletePost), to this: ('/tribes/addTopic', AddTopic), ('/tribes/delTopic', DeleteTopic), ('/tribes/addPost', AddPost), ('/tribes/delPost', DeletePost), but ,if i add this to my project ,i have to change the url in every py file or html file , in django it can be this : urlpatterns = patterns('', (r'^articles/2003/$', 'news.views.special_case_2003')), ) it is easy to add the url of 'news' to my peoject, but does webapp has this ? thanks updated: (1) my main page url is : ('/', MainPage), ('/sign', Guestbook), (2) the url of a webapp project that i want to add is : ('/', MainPage), ('/logout', LogoutPage), ('/login_response', LoginHandler), and i want to change (1) to this: ('/', MainPage), ('/sign', Guestbook), ('/aa/', p2.MainPage), ('/aa/logout', p2.LogoutPage), ('/aa/login_response', p2.LoginHandler), so i have to change so many url like / to /aa/ , or change /logout to /aa/logout in py file and html file , that is a hard work so any simple way to do this ?

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• Subprocess fails to catch the standard output

  - by user343934

  I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "<string>", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in <module> align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO\__init__.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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• python optparse, how to include additional info in usage output?

  - by CarpeNoctem

  Using python's optparse module I would like to add extra example lines below the regular usage output. My current help_print() output looks like this: usage: check_dell.py [options] options: -h, --help show this help message and exit -s, --storage checks virtual and physical disks -c, --chassis checks specified chassis components I would like it to include usage examples for the less *nix literate users at my work. Something like this: usage: check_dell.py [options] options: -h, --help show this help message and exit -s, --storage checks virtual and physical disks -c, --chassis checks specified chassis components Examples: check_dell -c all check_dell -c fans memory voltage check_dell -s How would I accomplish this? What optparse options allow for such? Current code: import optparse def main(): parser = optparse.OptionParser() parser.add_option('-s', '--storage', action='store_true', default=False, help='checks virtual and physical disks') parser.add_option('-c', '--chassis', action='store_true', default=False, help='checks specified chassis components') (opts, args) = parser.parse_args()

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• "Invalid signature": oAuth provider with Django-piston

  - by Martin Eve

  Hi, I'm working with django-piston to attempt to create an API that supports oAuth. I started out using the tutorial at: http://blog.carduner.net/2010/01/26/django-piston-and-oauth/ I added a consumer to piston's admin interface with key and secret both set to "abcd" for test purposes. The urls are successfully wired-up and the oAuth provider is called. However, running my get request token tests with tripit (python get_request_token.py "http://127.0.0.1:8000/api" abcd abcd), I receive the following error: Invalid signature. Expected signature base string: GET&http%3A%2F%2F127.0.0.1%3A8000%2Fapi%2Foauth%2Frequest_token%2F&oauth_consumer_key%3Dabcd%26oauth_nonce%3D0c0bdded5b1afb8eddf94f7ccc672658%26oauth_signature_method%3DHMAC-SHA1%26oauth_timestamp%3D1275135410%26oauth_version%3D1.0 The problem seems to lie inside the _check_signature method of Piston's oauth.py, where valid_sig = signature_method.check_signature(oauth_request, consumer, token, signature) is returning false. I can't, however, work out how to get the signature validated. Any ideas? -----Update----- If I remove the test consumer from piston's backend, the response returned is correctly set to "Invalid consumer", so this lookup appears to be working.

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• Is this how I do a crontab? Just put it in the file?

  - by alex

  crontab -e Then, paste it in? 5 * * * * python /home/alex/scanTags.py

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• Error in writting a class.

  - by Richard

  I am running through a tutorial online at http://www.sthurlow.com/python/lesson08/ and I believe I understand how classes work in python, at least to some degree but when I run this code: class Shape: def init(self,x,y): self.x = x self.y = y description = "This shape has not been described yet" author = "Nobody has claimed to make this shape yet" def area(self): return self.x * self.y def perimeter(self): return 2 * self.x + 2 * self.y def describe(self,text): self.description = text def authorName(self,text): self.author = text def scaleSize(self,scale): self.x = self.x * scale self.y = self.y * scale I get this error: Traceback (most recent call last): File "Y:/python/Shape.py", line 1, in -toplevel- class Shape: File "Y:/python/Shape.py", line 17, in Shape self.y = self.y * scale NameError: name 'self' is not defined Any Help would be great Thanks Richard

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• django generic view not recieving an object (template issue?)

  - by Kirby

  My Model class Player(models.Model): player_name = models.CharField(max_length=50) player_email = models.CharField(max_length=50) def __unicode__(self): return self.player_name My Root urls.py urlpatterns = patterns('', (r'^kroster/', include('djangosite.kroster.urls')), (r'^admin/(.*)', admin.site.root), ) My kroster urls.py from djangosite.kroster.models import Player info_dict = { 'queryset': Player.objects.all(), } urlpatterns = patterns('', (r'^$', 'django.views.generic.list_detail.object_list', info_dict), (r'^(?P<object_id>\d+)/$', 'django.views.generic.list_detail.object_detail', info_dict), ) My player_list.html template <h1>Player List</h1> {% if error_message %}<p><strong>{{ error_message }}</strong></p>{% endif %} <ul> {% for player in object.player_set.all %} <li id="{{ player.id }}">{{ forloop.counter }} .)&nbsp;&nbsp;{{ player }}</li> {% endfor %} </ul> Sadly my template output is this. <h1>Player List</h1> <ul> </ul> Apologies if this is a stupid mistake. It has to be something wrong w/ my template.

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• Code completion in NetBeans' python plugin does not work properly

  - by T.K.

  I am asking on StackOverflow because surely I am doing something completely silly and I hope S.O. might provide me with a quick answer. I've installed the latest stable Python-plugin for NetBeans. It works great, and I tested code completion with various packages such as sys, os and so on. It works beautifully. However, it does not seem to pick up the code completion for the code in my own project. I created a package called mypackage (it has _init_.py as well), and in it I have a module called mymodule.py. Inside mymodule I've put a class called MyClass, complete with doc-strings and all. Please refer to this screenshot to describe what happens in code-completion: As you see, it's suggesting irrelevant things, as opposed to just MyClass. (Note that if I execute mymodule.MyClass() it works 100%, it's just that I would really like code completion on my own code) Hope I'm just doing something silly here... Any ideas?

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• python and paramiko: how to check if end of ssh tunnel is still alive and reestablish if not?

  - by Christian

  Hello all, I'm trying to achieve the following: I have two hosts A and B. A establishes a remote port forwarding tunnel on B, i.e. B is the one a port is forwarded on to some where else and A is the one that sets up the tunnel. I tried the script rforward.py that ships with paramiko and it works very well so far. (I'm running rforward.py on A, which connects to B and forwards a port of B to somewhere else) However, when B is shutting down, A doesn't seem to recognize it. I'd rather like A to recognize that B is down and to try to reestablish the connection periodically in case B comes up again. Is there a way to do this? Thanks.

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• Django : mysql : 1045, "Access denied for user

  - by PlanetUnknown

  I have the whole setup working for months on my local computer. I'm installing on a remote site now. Created a fresh mysql DB, and created a new user ("someuser") and gave it complete grants, like so - GRANT ALL PRIVILEGES ON . TO 'someuser'@'localhost' IDENTIFIED BY 'somepassword' WITH GRANT OPTION; I have sync'd the db, using "python manage.py syncdb" and the correct tables were created. My settings.py has this same user. But when I try to login a user through the application, and it hits the DB, I see the following in the logs - (1045, "Access denied for user 'someuser'@'localhost' (using password: YES)") I logged in through mysql (installed on the same box as django) and checked the grants and it correctly shows - Grants for djangouser@localhost GRANT ALL PRIVILEGES ON * . * TO 'someuser'@'localhost' IDENTIFIED BY PASSWORD '*thesaltedpasswordOverHere' WITH GRANT OPTION I don't want to use the root user/password for django, since it doesn't seem the correct way. Any pointers as to what might be wrong ?

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• how to format date when i load data from google-app-engine..

  - by zjm1126

  i use remote_api to load data from google-app-engine. appcfg.py download_data --config_file=helloworld/GreetingLoad.py --filename=a.csv --kind=Greeting helloworld the setting is: class AlbumExporter(bulkloader.Exporter): def __init__(self): bulkloader.Exporter.__init__(self, 'Greeting', [('author', str, None), ('content', str, None), ('date', str, None), ]) exporters = [AlbumExporter] and i download a.csv is : the date is not readable , and the date in appspot.com admin is : so how to get the full date ?? thanks i change this : class AlbumExporter(bulkloader.Exporter): def __init__(self): bulkloader.Exporter.__init__(self, 'Greeting', [('author', str, None), ('content', str, None), ('date', lambda x: datetime.datetime.strptime(x, '%m/%d/%Y').date(), None), ]) exporters = [AlbumExporter] but the error is :

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• Zlib not available in OS X?

  - by Tylo

  I am trying to install a python library and receive this error after downloading an egg file. Downloading http://pypi.python.org/packages/2.5/s/setuptools/setuptools-0.6c7-py2.5.egg Traceback (most recent call last): File "setup.py", line 10, in <module> use_setuptools(min_version=min_version) File "/Users/tylo/Downloads/Archives/simplejson-2.0.9/ez_setup.py", line 88, in use_setuptools import setuptools; setuptools.bootstrap_install_from = egg zipimport.ZipImportError: can't decompress data; zlib not available I did some research and discovered that zlib is built into OS X. What could be going wrong here?

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• read subprocess stdout line by line

  - by Caspin

  My python script uses subprocess to call a linux utility that is very noisy. I want to store all of the output to a log file, but only show some of it to the user. I thought the following would work, but the output does show up in my application until the utility has produced a significant amount of output. #fake_utility.py, just generates lots of output over time import time i = 0 while True: print hex(i)*512 i += 1 time.sleep(0.5) #filters output import subprocess proc = subprocess.Popen(['python','fake_utility.py'],stdout.subprocess.PIPE) for line in proc.stdout: #the real code does filtering here print "test:", line.rstrip() The behavior I really want is for the filter script to print each line as it is received from the subprocess. Sorta like what tee does but with python code. What am I missing? Is this even possible?

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• Python doesn't work properly when I execute a script after using Right Click >> Command Prompt Here

  - by Dominic Bou-Samra

  This is a weird bug. I know it's something funky going on with my PATH variable, but no idea how to fix it. If I have a script C:\Test\test.py and I execute it from within IDLE, it works fine. If I open up Command Prompt using Runcmd.exe and navigate manually it works fine. But if I use Windows 7's convenient Right Click on folder Command Prompt Here then type test.py it fails with import errors. I also cannot just type "python" to reach a python shell session if I use the latter method above. Any ideas?

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