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• Partition does not start on physical sector boundary?

  - by jasmines

  I've one HD on my laptop, with two partitions (one ext3 with Ubuntu 12.04 installed and one swap). fdisk is giving me a Partition 1 does not start on physical sector boundary warning. What is the cause and do I need to fix it? If so, how? This is sudo fdisk -l: Disk /dev/sda: 750.2 GB, 750156374016 bytes 255 testine, 63 settori/tracce, 91201 cilindri, totale 1465149168 settori Unità = settori di 1 * 512 = 512 byte Sector size (logical/physical): 512 bytes / 4096 bytes I/O size (minimum/optimal): 4096 bytes / 4096 bytes Identificativo disco: 0x5a25087f Dispositivo Boot Start End Blocks Id System /dev/sda1 * 63 1448577023 724288480+ 83 Linux Partition 1 does not start on physical sector boundary. /dev/sda2 1448577024 1465147391 8285184 82 Linux swap / Solaris This is sudo lshw related result: *-disk description: ATA Disk product: WDC WD7500BPKT-0 vendor: Western Digital physical id: 0 bus info: scsi@0:0.0.0 logical name: /dev/sda version: 01.0 serial: WD-WX21CC1T0847 size: 698GiB (750GB) capabilities: partitioned partitioned:dos configuration: ansiversion=5 signature=5a25087f *-volume:0 description: EXT3 volume vendor: Linux physical id: 1 bus info: scsi@0:0.0.0,1 logical name: /dev/sda1 logical name: / version: 1.0 serial: cc5c562a-bc59-4a37-b589-805b27b2cbd7 size: 690GiB capacity: 690GiB capabilities: primary bootable journaled extended_attributes large_files recover ext3 ext2 initialized configuration: created=2010-02-27 09:18:28 filesystem=ext3 modified=2012-06-23 18:33:59 mount.fstype=ext3 mount.options=rw,relatime,errors=remount-ro,user_xattr,barrier=1,data=ordered mounted=2012-06-28 00:20:47 state=mounted *-volume:1 description: Linux swap volume physical id: 2 bus info: scsi@0:0.0.0,2 logical name: /dev/sda2 version: 1 serial: 16a7fee0-be9e-4e34-9dc3-28f4eeb61bf6 size: 8091MiB capacity: 8091MiB capabilities: primary nofs swap initialized configuration: filesystem=swap pagesize=4096 These are related /etc/fstab lines: UUID=cc5c562a-bc59-4a37-b589-805b27b2cbd7 / ext3 errors=remount-ro,user_xattr 0 1 UUID=16a7fee0-be9e-4e34-9dc3-28f4eeb61bf6 none swap sw 0 0

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• Emulate Historical Figures i.e. Einstein - Is this possible using linguistic logic for my http://www.ustimeline.com Education System

  - by Johnnylight

  After hearing about the success of IBM's Watson I started thinking perhaps emulating human language is now possible? My goal is to create Virtual Historical characters to represent the main characters in my Adventur-Cation The Great American Adventure program such as Einstein or Crazy Horse. The goal is to build an intelligent system capable of indexing the internet and storing the data using a schema using modern knowledge on linguistic theory (phonemes, morphemes, syntax) to build a system capable to returning a semantically sound response very similar to the response made by the same person if still alive today. The goal would be to use the same engine/system for all characters. Each characters would have their own digital representation and voice, and would organize data differently based on tags/keywords stored about the individual. Imagine a Max Headroom Einstein. Based on the success of Watson, I believe something like this may now be possible. Would be an interesting way to study history and would be a vehicle of entertainment as well. Can anyone confirm if this has already been attempted? Is anyone interested in exploring this using Cognitive Science, Psychology, Artificial Intelligence, Historical data captured on the internet, and Linguistic theory?

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• Ubuntu 12.04 LTX Install Problems (See post for system build details.)

  - by Lokitez

  This is my first ever attempt at working with Ubuntu. I have only ever installed Windows in the past and that may be the problem. I purchased all new hardware this week and I would really like to give Ubuntu a chance (especially since I don't want to buy another Windows license). First, the hardware: AMD FX-8150 Zambezi 3.6GHz Socket AM3+ 125W Eight-Core Desktop Processor ASUS Crosshair V Formula AM3+ AMD 990FX SATA 6Gb/s USB 3.0 ATX AMD Gaming Motherboard SAMSUNG 830 Series MZ-7PC128D/AM 2.5" 128GB SATA III MLC Internal Solid State Drive (SSD) - This is my intended boot drive. Western Digital VelociRaptor WD5000HHTZ 500GB 10000 RPM SATA 6.0Gb/s 3.5" Internal Hard Drive - This is a backup drive that I have installed Windows Vista on until I can get Ubuntu to work. G.SKILL Ripjaws X Series 16GB (2 x 8GB) 240-Pin DDR3 SDRAM DDR3 1600 (PC3 12800) ASUS HD7850-DC2-2GD5 Radeon HD 7850 2GB 256-bit GDDR5 PCI Express 3.0 x16 I have downloaded and tried to install both Ubuntu 64 bit and Kubuntu 64 bit (both 12.04). Both will always fail to copy a file during install or otherwise lockup during install to the SSD. I have burned two copies of the Ubuntu 12.04 and had the install fail with both. I have installed Vista onto the HDD. Is it possible to mount the Ubuntu file into

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• cannot boot ubuntu 13.10 with my usb, Can i change the kernal on my laptop to run it?

  - by Carlos Dunick

  Currently i am running 12.04 and looking for an upgrade to 13.10 I first tried a bootable 64bit usb and failed. With the message saying "Kernal requires an x86-64 CPU but only detected an I686 CPU Unable to boot please use a kernal appropriate for your CPU" then tried 32bit and same message came up. Is this due to my laptop simply being to slow? or can/should i change the kernal somehow? Acer Aspire 5710z Intel Pentium dual core processor, 1.73Ghz, 533 MHz FSB, 1 MB L2 cache. 2GB DDR2 lspci 00:00.0 Host bridge: Intel Corporation Mobile 945GM/PM/GMS, 943/940GML and 945GT Express Memory Controller Hub (rev 03) 00:02.0 VGA compatible controller: Intel Corporation Mobile 945GM/GMS, 943/940GML Express Integrated Graphics Controller (rev 03) 00:02.1 Display controller: Intel Corporation Mobile 945GM/GMS/GME, 943/940GML Express Integrated Graphics Controller (rev 03) 00:1b.0 Audio device: Intel Corporation NM10/ICH7 Family High Definition Audio Controller (rev 02) 00:1c.0 PCI bridge: Intel Corporation NM10/ICH7 Family PCI Express Port 1 (rev 02) 00:1c.2 PCI bridge: Intel Corporation NM10/ICH7 Family PCI Express Port 3 (rev 02) 00:1c.3 PCI bridge: Intel Corporation NM10/ICH7 Family PCI Express Port 4 (rev 02) 00:1d.0 USB controller: Intel Corporation NM10/ICH7 Family USB UHCI Controller #1 (rev 02) 00:1d.1 USB controller: Intel Corporation NM10/ICH7 Family USB UHCI Controller #2 (rev 02) 00:1d.2 USB controller: Intel Corporation NM10/ICH7 Family USB UHCI Controller #3 (rev 02) 00:1d.3 USB controller: Intel Corporation NM10/ICH7 Family USB UHCI Controller #4 (rev 02) 00:1d.7 USB controller: Intel Corporation NM10/ICH7 Family USB2 EHCI Controller (rev 02) 00:1e.0 PCI bridge: Intel Corporation 82801 Mobile PCI Bridge (rev e2) 00:1f.0 ISA bridge: Intel Corporation 82801GBM (ICH7-M) LPC Interface Bridge (rev 02) 00:1f.1 IDE interface: Intel Corporation 82801G (ICH7 Family) IDE Controller (rev 02) 00:1f.2 SATA controller: Intel Corporation 82801GBM/GHM (ICH7-M Family) SATA Controller [AHCI mode] (rev 02) 00:1f.3 SMBus: Intel Corporation NM10/ICH7 Family SMBus Controller (rev 02) 04:00.0 Ethernet controller: Broadcom Corporation NetLink BCM5787M Gigabit Ethernet PCI Express (rev 02) 05:00.0 Network controller: Broadcom Corporation BCM4311 802.11b/g WLAN (rev 01) 06:00.0 FLASH memory: ENE Technology Inc ENE PCI Memory Stick Card Reader Controller 06:00.1 SD Host controller: ENE Technology Inc ENE PCI SmartMedia / xD Card Reader Controller 06:00.2 FLASH memory: ENE Technology Inc Memory Stick Card Reader Controller 06:00.3 FLASH memory: ENE Technology Inc ENE PCI Secure Digital / MMC Card Reader Controller

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• Turn a Kindle into a Weather Display Station

  - by Jason Fitzpatrick

  The e-ink display, network connectivity, and low-power consumption of Kindle ebook readers make them a perfect candidate for an infrequently refreshed high-visibility display–like a weather display. Read on to see how to hack a Kindle to serve up the local weather. Tinker and hardware hacker Matt Petroff hacked his Kindle to accept input from a web server and then, graciously and in the spirit of geeky projects everywhere, shared his source code. He explains the heart of the project: The server side of the system uses shell and Python scripts to convert weather forecast data into an image for the Kindle. The scripts first download and parse forecast data from NOAA via the National Digital Forecast Database XML/SOAP Service. After parsing the data, the data then needs to be converted into an image. This is accomplished by preprocessing a specially crafted SVG file to insert temperatures, forecast symbols, and days of the week. This SVG is then rendered as a PNG using rsvg-convert and converted to a grayscale, no transparency color space as required by the Kindle using pngcrush. Finally, it is copied to a public location on the web server. The Kindle is set to refresh twice a day (you could easily tweak the scripts for a more frequent refresh) and displays the forecast as seen in the photo above–with crisp and easy to read text and icons. Hit up the link below for more information and the project’s source code. How To Create a Customized Windows 7 Installation Disc With Integrated Updates How to Get Pro Features in Windows Home Versions with Third Party Tools HTG Explains: Is ReadyBoost Worth Using?

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• Slightly off topic - How to Fix Sky Go Error [t6013-c1501] (and [t6000-c1501])

  - by bconlon

  Sky doesn't seem to understand what their own errors mean, so I cobbled together an understanding from some other posts and managed to get it working.When you see the error [t6013-c1501] instead of your TV programme in Sky Go, it seems to mean:'You registered a device, but then changed the hardware, so now I'm confused!'In other words, the Digital rights management (DRM) used between Sky Go and Silverlight stored an old fingerprint of your PC, but rather than recognising this and allowing you to remove the device, it just disappears from the 'Manage Devices' page.DISCLAIMER: Perform the following steps at your own risk. It worked for me, but I didn't care if it broke stuff. If you care....don't do it!So, to fix this I did the following:1. Login to Sky Go and click 'Watch live TV' from the home page. It will attempt to show Sky News and fail with the error [t6013-c1501].2. Right click on the error and you should see the Menu option 'Silverlight'. Select this and a dialog should appear. Click the 'Application Storage' tab and delete any entry that relates to sky go. Clcik OK to close the dialog.3. Open explorer and navigate to the folder C:\ProgramData\Microsoft\PlayReady4. Rename the file mspr.hds to mspr.hds.OLD5. Go back to the browser and click F5. You may need to logout/login (not sure).Note: Don't rename/delete the folder C:\ProgramData\Microsoft\PlayReady or you will get the error [t6000-c1501]. The folder must exist in order for the new file to be created by Silverlight. Techie talk:So whoever wrote the code to create a new mspr.hds file didn't write code to check the folder existed causing what I assume is a generic error t6000, probably something like:catch (Exception ex) { WriteToLog("Oops, something broke!"); }#

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• C# Dev Challenge Part 1 of n &ndash; Beginner Edition

  - by mbcrump

  I developed this challenge to test one’s knowledge of C Sharp. I am planning on creating several challenges with different skill sets, so don’t get mad if this challenge doesn’t well challenge you... I noticed that most people like short quizzes so this one only contains 5 questions. All of the challenges are clear and concise of what I am asking you to do. No smoke and mirrors here, meaning that none of the code has syntax errors. The purpose of this exercise is to test several OOP concepts and see how much of the C# language you really know. Question #1 – Lets start off Easy… Will the following code snippet compile successfully? What does this question test? - Can this compile without a namespace? Do you have to have an entry point of “static void Main()”? class Test { static int Main() { System.Console.WriteLine("Developer Challenge"); return 0; } } Answer (select text in box below): Yes, it will compile successfully. Question #2 – What is the value of the Console.WriteLine statements? What does this question test? – Do I understand reference types/value types? If a variable is declared with the @ symbol and its not a reserved keyword does the application compile successfully? using System; internal struct MyStruct { public int Value; } internal class MyClass { public int Value; } class Test { static void Main() { MyStruct @struct1 = new MyStruct(); MyStruct @struct2 = @struct1; @struct2.Value = 100; MyClass @ref1 = new MyClass(); MyClass @ref2 = @ref1; @ref2.Value = 100; Console.WriteLine("Value Type: {0} {1}", @struct1.Value, @struct2.Value); Console.WriteLine("Reference Type: {0} {1}", @ref1.Value, @ref2.Value); } } Answer (select text in box below): Value Type: 0 100 Reference Type: 100 100 Question #3 – What is the value of the Console.WriteLine statements? What does this question test? – Can 2 objects reference the same point in memory? using System; class Test { static void Main() { string s1 = "Testing2"; string t1 = s1; Console.WriteLine(s1 == t1); Console.WriteLine((object)s1 == (object)t1); } } Answer (select text in box below): True True Question #4 – What is the value of the Console.WriteLine statements? What does this question test? – How does the “Stack” work – LIFO or FIFO?   using System; using System.Collections; class Test { static void Main() { Stack a = new Stack(5); a.Push("1"); a.Push("2"); a.Push("3"); a.Push("4"); a.Push("5"); foreach (var o in a) { Console.WriteLine(o); } } } Answer (select text in box below): 5 4 3 2 1 Question #5 – What is the value of the Console.WriteLine statements? What does this question test? – Array and General Looping Knowledge. using System; namespace ConsoleApplication5 { class Program { static void Main(string[] args) { int[] J_LIST = new int[5] { 1, 2, 3, 4, 5 }; int K = 10; int L = 5; foreach (var J in J_LIST) { K = K - J; L = K + 2 * J; Console.WriteLine("J = {0, 5} K = {1, 5} L = {2, 5}", J, K, L); } Console.ReadLine(); } } } Answer (select text in box below): J = 1 K = 9 L = 11 J = 2 K = 7 L = 11 J = 3 K = 4 L = 10 J = 4 K = 0 L = 8 J = 5 K = -5 L = 5 Stay Tuned for more challenges!

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• No sound Ubuntu 12.04 through HDMI

  - by MikeMan

  Specs: Asus G73JH i7/720; ATI Mobility 5870 I have read through a lot of threads on getting HDMI sound to work and non of them have fixed my issue. Granted I am very new to Linux and know only the GUI aspect of what it does from finding similarities that Windows 7 has. I would like to become a Linux Power User and I figured this would be a good step to get started. I was able to successfully install my graphics driver and it shows in use. I connect the HDMI to my HD TV and I get no sound. I don't care about auto switch for sound, that would be great but not necessary. I just want my sound to work through the HDMI. What I have tried: Changed GRUB_CMDLINE_LINUX_DEFAULT="quiet splash" to GRUB_CMDLINE_LINUX_DEFAULT="quiet splash radeon.audio=1" pact set-card-profile 0 output:hdmi-surround Failure: no such entity Sound Settings: Right-click Sound indicator ? Sound Settings ? Output Tab, and set Digital Output (S/PDIF) Built in Audio Speakers Built in Audio I only get 2 settings. If I right-click the area below those 2 in the "play sound through" box, I get no "show hidden devices". I am also doing all this with the HDMI connected to eliminate any possibility for error.

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• Agressive Auto-Updating?

  - by MattiasK

  What do you guys think is best practice regarding auto-updating? Google Chrome for instance seems to auto-update itself as soon as it get's a chance without asking and I'm fine with it. I think most "normal" users benefits from updates being a transparent process. Then again, some more technical users might be miffed if you update their app without permission, as I see it there's 3 options: 1) Have a checkbox when installing that says "allow automatic updates" 2) Just have a preference somewhere that allows you to "disable automatic updates" so that you have to "check for updates manually" I'm leaning towards 2) because 1) feels like it might alienate non-technical users and I'd rather avoid installation queries if possible. Also I'm thinking about making it easy to downgrade if an upgrade (heaven forbid) causes trouble, what are your thoughts? Another question, even if auto-updates are automatically, perhaps they should be announced. If there's new features for example otherwise you might not realize and use them One thing that kinda scares me though is the security implications, someone could theorically hack my server and push out spyware/zombieware to all my customers. It seems that using digital signatures to prevent man-in-the-middle attacks is the least you could do otherwise you might be hooked up to a network that spoofs the address of of update server.

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• Aggressive Auto-Updating?

  - by MattiasK

  What do you guys think is best practice regarding auto-updating? Google Chrome for instance seems to auto-update itself as soon as it get's a chance without asking and I'm fine with it. I think most "normal" users benefits from updates being a transparent process. Then again, some more technical users might be miffed if you update their app without permission, as I see it there's 3 options: 1) Have a checkbox when installing that says "allow automatic updates" 2) Just have a preference somewhere that allows you to "disable automatic updates" so that you have to "check for updates manually" I'm leaning towards 2) because 1) feels like it might alienate non-technical users and I'd rather avoid installation queries if possible. Also I'm thinking about making it easy to downgrade if an upgrade (heaven forbid) causes trouble, what are your thoughts? Another question, even if auto-updates are automatically, perhaps they should be announced. If there's new features for example otherwise you might not realize and use them One thing that kinda scares me though is the security implications, someone could theorically hack my server and push out spyware/zombieware to all my customers. It seems that using digital signatures to prevent man-in-the-middle attacks is the least you could do otherwise you might be hooked up to a network that spoofs the address of of update server.

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• Just installed Ubuntu 12.04. When booting, all I get is a black screen with cursor

  - by user66378

  Installation appears to go fine. After rebooting, I get my motherboard loading screens, but when it comes time for Ubuntu to boot, I just get a black screen with a blinking white underscore in the top-left - same as I got when waiting for the install CD to load, except it lasts forever. The only keypress it seems to recognize is ctrl+alt+del, which reboots. Letters don't register, function keys w/ or w/o modifiers do nothing. I've installed Ubuntu 12.04 twice and got the same error. The first time, I installed it as the only OS, and had it take up the whole disk. The second time, I installed Windows 7 first, then Ubuntu by specifying custom partitions. After this install, it would boot straight to Windows without showing grub. I used EasyBCD to add the Ubuntu installation to grub, and this got grub to show, and let me select it, but it led back to the same error described up top. I've had Linux Mint 11 and 12 installed on this PC, but was unable to get previous versions of Ubuntu to install (always had errors while installing, not after). Hardware: Intel Core i7-2600K Sandy Bridge 3.4GHz (3.8GHz Turbo Boost) LGA 1155 ASUS SABERTOOTH P67 (REV 3.0) LGA 1155 Intel P67 SATA 6Gb/s USB 3.0 ATX Intel Motherboard EVGA 01G-P3-1371-TR GeForce GTX 460 (Fermi) CORSAIR Vengeance 16GB (4 x 4GB) 240-Pin DDR3 SDRAM DDR3 1600 (PC3 12800) Western Digital RE4 WD5003ABYX 500GB 7200 RPM SATA 3.0Gb/s 3.5" Internal Hard Drive

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• "drm:[drm_crtc_helper_set_config] *ERROR* failed to set mode on [CRTC6]" during install

  - by Warez J. Coxtrong

  I have a desktop PC which I built a while back. It has an Athlon XP 2500+, 2.5GB RAM, and an Nvidia (PNY Verto) Geforce 6200. I removed the CD drive to add another hard drive so I install from a USB flash drive. When I try to install 12.04 it seems to work just fine. The GUI boots up and wifi even connects to my router. I go through the language screen, the partition screen, the keyboard screen, the location screen, and the import my Windows settings screen just fine. But as soon as I'm done with all that the next screen goes black and displays this message: drm:[drm_crtc_helper_set_config] *ERROR* failed to set mode on [CRTC6] Since the GUI starts just fine earlier during the install, I know I shouldn't be having any display problems, but I am. How do I get Ubuntu to install properly? I have four IDE hard drives, all Western Digital: a 250GB, a 160GB, a 40GB occupied by Windows XP, and a 120GB that I'm trying to use for Ubuntu. 3GB of the 120GB drive are formatted for swap. I have checked the MD5sum of install image file and it all matches up. d791352694374f1c478779f7f4447a3f ubuntu-12.04-desktop-i386.iso

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• ASP.Net MVC2 DropDownListFor

  - by hermiod

  Hi all I am trying to learn MVC2, C# and Linq to Entities all in one project (yes, I am mad) and I am experiencing some problems with DropDownListFor and passing the SelectList to it. This is the code in my controller: public ActionResult Create() { var Methods = te.Methods.Select(a => a); List<SelectListItem> MethodList = new List<SelectListItem>(); foreach (Method me in Methods) { SelectListItem sli=new SelectListItem(); sli.Text = me.Description; sli.Value = me.method_id.ToString(); MethodList.Add(sli); } ViewData["MethodList"] = MethodList.AsEnumerable(); Talkback tb = new Talkback(); return View(tb); } and I am having troubles trying to get the DropDownListFor to take the MethodList in ViewData. When I try: <%:Html.DropDownListFor(model => model.method_id,new SelectList("MethodList","method_id","Description",Model.method_id)) %> It errors out with the following message DataBinding: 'System.Char' does not contain a property with the name 'method_id'. I know why this is, as it is taking MethodList as a string, but I can't figure out how to get it to take the SelectList. If I do the following with a normal DropDownList: <%: Html.DropDownList("MethodList") %> It is quite happy with this. Can anyone help?

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• NSTextField autocomplete

  - by Rasmus Styrk

  Does anyone know of any class or lib that can implement autocompletion to an NSTextField? I'am trying to get the standard autocmpletion to work but it is made as a synchronous api. I get my autocompletion words via an api call over the internet. What have i done so far is: - (void)controlTextDidChange:(NSNotification *)obj { if([obj object] == self.searchField) { [self.spinner startAnimation:nil]; [self.wordcompletionStore completeString:self.searchField.stringValue]; if(self.doingAutocomplete) return; else { self.doingAutocomplete = YES; [[[obj userInfo] objectForKey:@"NSFieldEditor"] complete:nil]; } } } When my store is done, i have a delegate that gets called: - (void) completionStore:(WordcompletionStore *)store didFinishWithWords:(NSArray *)arrayOfWords { [self.spinner stopAnimation:nil]; self.completions = arrayOfWords; self.doingAutocomplete = NO; } The code that returns the completion list to the nstextfield is: - (NSArray *)control:(NSControl *)control textView:(NSTextView *)textView completions:(NSArray *)words forPartialWordRange:(NSRange)charRange indexOfSelectedItem:(NSInteger *)index { *index = -1; return self.completions; } My problem is that this will always be 1 request behind and the completion list only shows on every 2nd char the user inputs. I have tried searching google and SO like a mad man but i cant seem to find any solutions.. Any help is much appreciated.

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• InterIMAP, Viewing UNREAD IMAP mail and Downloading Attachments in C#

  - by Erika

  I was wondering if anyone can help me on this cause its driving me mad trying get this working I was working with the trail of mail.dll from http://www.lesnikowski.com/mail/ which is an extremely fantastic tool which unfortunately i cannot afford being a student (even though its around 150eur, its still very expensive to me :/) and this would be a small module in my thesis and my faculty cannot afford to buy these things for students either :/ so anyway I had to go for a free tool (so please dont suggest any non open source ones - trust me i have tried them ALL).. Well, i'm trying to explore InterIMAP, and for several hours have been trying to list unread emails from my gmail account but it just doesn't seem to be working. I can connect just fine but finding the unread emails seems to be no easy task.. I have tried countless approaches but non seem to give me unread emails in my inbox (I have loads of emails in my inbox and i just want the unread ones). Would someone please assist me? I have been trying to get this working for ages now, but documentation is rather lacking and my every attempt has resulted in a fail so far. Please help!! Some code i currently have: ` IMAPConfig config = new IMAPConfig("myhost", "username", "pass", true, true, ""); config.CacheFile = ""; IMAPClient client = null; try { client = new IMAPClient(config, null, 5); } catch (IMAPException e) { Console.WriteLine(e.Message); return; } Console.WriteLine(DateTime.Now.ToString()); IMAPFolder f = client.Folders["INBOX"]; IMAPSearchResult sResult = f.Search(IMAPSearchQuery.QuickSearchNew()); // <--- Gives me no results even though i do have unread messages!

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• BASH statements execute alone but return "no such file" in for loop.

  - by reve_etrange

  Another one I can't find an answer for, and it feels like I've gone mad. I have a BASH script using a for loop to run a complex command (many protein sequence alignments) on a lot of files (~5000). The loop produces statements that will execute when given alone (i.e. copy-pasted from the error message to the command prompt), but which return "no such file or directory" inside the loop. Script below; there are actually several more arguments but this includes some representative ones and the file arguments. #!/bin/bash # Pass directory with targets as FASTA sequences as argument. # Arguments to psiblast # Common db=local/db/nr/nr outfile="/mnt/scratch/psi-blast" e=0.001 threads=8 itnum=5 pssm="/mnt/scratch/psi-blast/pssm." pssm_txt="/mnt/scratch/psi-blast/pssm." pseudo=0 pwa_inclusion=0.002 for i in ${1}/* do filename=$(basename $i) "local/ncbi-blast-2.2.23+/bin/psiblast\ -query ${i}\ -db $db\ -out ${outfile}/${filename}.out\ -evalue $e\ -num_threads $threads\ -num_iterations $itnum\ -out_pssm ${pssm}$filename\ -out_ascii_pssm ${pssm_txt}${filename}.txt\ -pseudocount $pseudo\ -inclusion_ethresh $pwa_inclusion" done Running this scripts gives "<scriptname> line <last line before 'done'>: <attempted command> : No such file or directory. If I then paste the attempted command onto the prompt it will run. Each of these commands takes a couple of minutes to run.

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• How do I reference Django Model from another model

  - by user313943

  Im looking to create a view in the admin panel for a test program which logs Books, publishers and authors (as on djangoproject.com) I have the following two models defined. class Author(models.Model): first_name = models.CharField(max_length=30) last_name = models.CharField(max_length=30) email = models.EmailField() def __unicode__(self): return u'%s %s' % (self.first_name, self.last_name) class Book(models.Model): title = models.CharField(max_length=100) authors = models.ManyToManyField(Author) publisher = models.ForeignKey(Publisher) publication_date = models.DateField() def __unicode__(self): return self.title What I want to do, is change the Book model to reference the first_name of any authors and show this using admin.AdminModels. #Here is the admin model I've created. class BookAdmin(admin.ModelAdmin): list_display = ('title', 'publisher', 'publication_date') # Author would in here list_filter = ('publication_date',) date_hierarchy = 'publication_date' ordering = ('-publication_date',) fields = ('title', 'authors', 'publisher', 'publication_date') filter_horizontal = ('authors',) raw_id_fields = ('publisher',) As I understand it, you cannot have two ForeignKeys in the same model. Can anyone give me an example of how to do this? I've tried loads of different things and its been driving me mad all day. Im pretty new to Python/Django. Just to be clear - I'd simply like the Author(s) First/Last name to appear alongside the book title and publisher name. Thanks

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• Unable to cast type isse in silverlight

  - by prince23

  error once i clcik on the button i am getting this error. this is my code <sdk:DataGrid MinHeight="100" x:Name="dgCounty" AutoGenerateColumns="False" VerticalAlignment="Top" IsReadOnly="True" Margin="5,5,5,0" RowDetailsVisibilityChanged="dgCounty_RowDetailsVisibilityChanged" RowDetailsVisibilityMode="VisibleWhenSelected"> <sdk:DataGrid.Columns> <data:DataGridTemplateColumn.CellTemplate> <DataTemplate> <Button Content="+" Click="Button_Click"></Button> </DataTemplate> private void Button_Click(object sender, RoutedEventArgs e) { Button btnExpandCollapse = sender as Button; var Row = DataGridRow.GetRowContainingElement(sender as FrameworkElement); if (Row.DetailsVisibility == Visibility.Collapsed) { Row.DetailsVisibility = Visibility.Visible; } else { Row.DetailsVisibility = Visibility.Collapsed; } if (btnExpandCollapse.Content.ToString() == "+") { btnExpandCollapse.Content = "-"; } else if (btnExpandCollapse.Content.ToString() == "-") { btnExpandCollapse.Content = "+"; } } void dtg_RowDetailsVisibilityChanged(object sender, DataGridRowDetailsEventArgs e) { DataGrid RowDetails = e.DetailsElement as DataGrid if(RowDetails.YourDesiciveFlag = true) { } else { } } } working on this issue from past 3 days any idea how to solve this issue. just going mad on this issue. for expand /collpase in data grid in silverlight. let me know if you people can provide me any code that can solve my issue. thanks in advance prince

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• problem on ajax call

  - by praveen

  hi i am using mootools ajax request in my project. its works properly but when i make request for it aborted first time and second time request mad. consequently abortion of request increase by one at each click. my code is following function addStepConfiguration(id,mystrip,comment,error,submitid) { // alert(id+'\n'+mystrip+'\n'+comment+'\n'+error+'\n'+submitid.value); $(id).addEvent('submit', function(e) { e.stop(); this.set('send', { onRequest:function(html){ $(submitid).setStyle('display','none'); loading_Img(); }, onComplete: function(responseText) { $('loading_img').innerHTML = ''; SplittedResText = responseText.split("|"); s //alert(SplittedResText); if(SplittedResText[1]=='undefined') { $(error).innerHTML=SplittedResText[0]; $(submitid).setStyle('display','block'); } else { $(comment).innerHTML=SplittedResText[0]; $(mystrip).set('class',SplittedResText[1]); //$(image).setProperty('src',SplittedResText[2]); removeMsg.delay(20,'',error); removeMsg.delay(3000,'',comment); $(submitid).setStyle('display','block'); } } }); this.send(); }); }

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• MVC 2 Data annotations problem

  - by Louzzzzzz

  Hi. Going mad now. I have a MVC solution that i've upgraded from MVC 1 to 2. It all works fine.... except the Validation! Here's some code: In the controller: using System; using System.Collections.Generic; using System.Globalization; using System.Linq; using System.Security.Principal; using System.Web; using System.Web.Mvc; using System.Web.Security; using System.Web.UI; using MF.Services.Authentication; using System.ComponentModel; using System.ComponentModel.DataAnnotations; namespace MF.Controllers { //basic viewmodel public class LogOnViewData { [Required] public string UserName { get; set; } [Required] public string Password { get; set; } } [HandleError] public class AccountController : Controller { [HttpPost] public ActionResult LogOn(LogOnViewData lvd, string returnUrl) { if (ModelState.IsValid) { //do stuff - IsValid is always true } } } } The ModelState is always valid. The model is being populated correctly however. Therefore, if I leave both username and password blank, and post the form the model state is still valid. Argh! Extra info: using structure map for IoD. Previously, before upgrading to MVC 2 was using the MS data annotation library so had this in my global.asax.cs: ModelBinders.Binders.DefaultBinder = new Microsoft.Web.Mvc.DataAnnotations.DataAnnotationsModelBinder(); Have removed that now. I'm sure i'm doing something really basic and wrong. If someone could point it out that would be marvellous. Cheers

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• How do I create Twitter style URL's for my app - Using existing application or app redesign - Ruby o

  - by bgadoci

  I have developed a blog application of sorts that I am trying to allow other users to take advantage of (for free and mostly for family). I wondering if the authentication I have set up will allow for such a thing. Here is the scenario. Currently the application allows for users to sign up for an account and when they do so they can create blog posts and organize those posts via tags. The application displays no data publicly (another words, you have to login to see anything). To gain access you have to create an account and even after you do, you cannot see anyone else's information as the applications filters using the current_user method and displays in the /posts/index.html.erb page. This would be great if a user only wanted to blog and share it with themselves, not really what I am looking for. My question has two parts (hopefully I won't make anyone mad by not putting these into two questions) Is it possible for a particular users data to live at www.myapplication.com/user without moving everything to the /user/show.html.erb file? Is it possible to make some of that information (living at the URL) public but still require login for create and destroy actions. Essentially, exactly like twitter. I am just curious if I can get from where I am (using the current_user methods across controllers to display in /posts/index.html.erb) to where I want to be. My fear is that I have to redesign the app such that the user data lives in the /user/show.html.erb page. Thoughts?

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• How do I create Twitter style URLs for my app - Using existing application or app redesign - Ruby on

  - by bgadoci

  I have developed a blog application of sorts that I am trying to allow other users to take advantage of (for free and mostly for family). I wondering if the authentication I have set up will allow for such a thing. Here is the scenario. Currently the application allows for users to sign up for an account and when they do so they can create blog posts and organize those posts via tags. The application displays no data publicly (another words, you have to login to see anything). To gain access you have to create an account and even after you do, you cannot see anyone else's information as the applications filters using the current_user method and displays in the /posts/index.html.erb page. This would be great if a user only wanted to blog and share it with themselves, not really what I am looking for. My question has two parts (hopefully I won't make anyone mad by not putting these into two questions) Is it possible for a particular users data to live at www.myapplication.com/user without moving everything to the /user/show.html.erb file? Is it possible to make some of that information (living at the URL) public but still require login for create and destroy actions. Essentially, exactly like twitter. I am just curious if I can get from where I am (using the current_user methods across controllers to display in /posts/index.html.erb) to where I want to be. My fear is that I have to redesign the app such that the user data lives in the /user/show.html.erb page. Thoughts? UPDATE: I am using Clearance for authentication by Thoughtbot. I wonder if there is something I can set in the vendored gem path to represent the /posts/index.html.erb code as the /user/id code and replace id with the user name.

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• What is best practice (and implications) for packaging projects into JAR's?

  - by user245510

  What is considered best practice deciding how to define the set of JAR's for a project (for example a Swing GUI)? There are many possible groupings: JAR per layer (presentation, business, data) JAR per (significant?) GUI panel. For significant system, this results in a large number of JAR's, but the JAR's are (should be) more re-usable - fine-grained granularity JAR per "project" (in the sense of an IDE project); "common.jar", "resources.jar", "gui.jar", etc I am an experienced developer; I know the mechanics of creating JAR's, I'm just looking for wisdom on best-practice. Personally, I like the idea of a JAR per component (e.g. a panel), as I am mad-keen on encapsulation, and the holy-grail of re-use accross projects. I am concerned, however, that on a practical, performance level, the JVM would struggle class loading over dozens, maybe hundreds of small JAR's. Each JAR would contain; the GUI panel code, necessary resources (i.e. not centralised) so each panel can stand alone. Does anyone have wisdom to share?

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• C++ Serialization Clean XML Similar to XSTREAM

  - by disown

  I need to write a linux c++ app which saves it settings in XML format (for easy hand editing) and also communicates with existing apps through XML messages over sockets and HTTP. Problem is that I haven't been able to find any intelligent libs to help me, I don't particular feel like writing DOM or SAX code just to write and read some very simple messages. Boost Serialization was almost a match, but it adds a lot of boost-specific data to the xml it generates. This obviously doesn't work well for interchange formats. I'm wondering if it is possible to make Boost Serialization or some other c++ serialization library generate clean xml. I don't mind if there are some required extra attributes - like a version attribute, but I'd really like to be able to control their naming and also get rid of 'features' that I don't use - tracking_level and class_id for instance. Ideally I would just like to have something similar to xstream in Java. I am aware of the fact that c++ lacks introspection and that it is therefore necessary to do some manual coding - but it would be nice if there was a clean solution to just read and write simple XML without kludges! If this cannot be done I am also interested in tools where the XML schema is the canonical resource (contract first) - a good JAXB alternative to C++. So far I have only found commercial solutions like CodeSynthesis XSD. I would prefer open source solutions. I have tried gSoap - but it generates really ugly code and it is also SOAP-specific. In desperation I also started looking at alternative serialization formats for protobuffers. This exists - but only for Java! It really surprises me that protocol buffers seems to be a better supported data interchange format than XML. I'm going mad just finding libs for this app and I really need some new ideas. Anyone?

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• Publish failed using Ant publisher (Eclipse/datanucleus).

  - by aronp

  Dear All, I am being driven mad the following (apparently hard) error from eclipse. Publish failed using Ant publisher Resource is out of sync with the file system: '/MyServlet/build/classes/com/inver/hotzones/database/BaseNetworkData.class'. I have seen comments on similar errors where refreshing eclipses view of the project helps but it is not helping me. Have tried cleaning the project, removing it from the webserver, deleting war files but cant seem to clear it. I have reset my TMPDIR variable so that it uses a directory on the same filesystem as that appeared to be another possible cause. The error occurs on classes which have been enhanced by datanuculeus. I have auto-enhance on the project. The other references to this problem indicate that it is due to Eclipses view of the project being out of step with the filesystem, and I am guessing that this has something to do with thedata nucleus enhancement. Any ideas? Thanks. I am using Eclipse 3.5.2 with latest datanucleus pluggins. Stack trace org.eclipse.core.runtime.CoreException: Resource is out of sync with the file system: '/MyServlet/build/classes/com/inver/hotzones/database/BaseNetworkData.class'. at org.eclipse.jst.server.generic.core.internal.publishers.AbstractModuleAssembler.copyModule(AbstractModuleAssembler.java:172) at org.eclipse.jst.server.generic.core.internal.publishers.WarModuleAssembler.assemble(WarModuleAssembler.java:31) at org.eclipse.jst.server.generic.core.internal.publishers.AntPublisher.assembleModule(AntPublisher.java:167) at org.eclipse.jst.server.generic.core.internal.publishers.AntPublisher.publish(AntPublisher.java:128) at org.eclipse.jst.server.generic.core.internal.GenericServerBehaviour.publishModule(GenericServerBehaviour.java:82) at org.eclipse.wst.server.core.model.ServerBehaviourDelegate.publishModule(ServerBehaviourDelegate.java:949) at org.eclipse.wst.server.core.model.ServerBehaviourDelegate.publishModules(ServerBehaviourDelegate.java:1039) at org.eclipse.wst.server.core.model.ServerBehaviourDelegate.publish(ServerBehaviourDelegate.java:872) at org.eclipse.wst.server.core.model.ServerBehaviourDelegate.publish(ServerBehaviourDelegate.java:708) at org.eclipse.wst.server.core.internal.Server.publishImpl(Server.java:2731) at org.eclipse.wst.server.core.internal.Server$PublishJob.run(Server.java:278) at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)

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