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  • Is it possible to use re2 from Python?

    - by flow
    i just discovered http://code.google.com/p/re2, a promising library that uses a long-neglected way (Thompson NFA) to implement a regular expression engine that can be orders of magnitudes faster than the available engines of awk, Perl, or Python. so i downloaded the code and did the usual sudo make install thing. however, that action had seemingly done little more than adding /usr/local/include/re2/re2.h to my system. there seemed to be some `*.a file in addition, but then what is it with this *.a extension? i would like to use re2 from Python (preferrably Python 3.1) and was excited to see files like make_unicode_groups.py in the distro (maybe just used during the build process?). those however were not deployed on my machine. how can i use re2 from Python?

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  • Match string which doesn't start with

    - by Pinky
    I have a string that looks like this: var str = "Hello world, &nbsp;hello &gt;world, hello world!"; ... and I'd like to replace all the hellos with e.g. bye and world with earth, except the words that start with &nbsp or &gt. Those should be ignored. So the result should be: bye earth, &nbsp;hello &gt;world, bye earth! Tried to this with str.replace(/(?!\&nbsp;)hello/gi,'bye')); But it doesn't work.

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  • Replacing text node of HTML input in PHP

    - by Aman Kumar Jain
    Hi, I want to replace all the text nodes in a html text. I'll explain with an example: $html = " <div> <p> text2 text2 word text2 <span>abcd</span> text2 text2 word text2 <p> this is a long, very long statement with punctuations. </div> I want to replace "text2 text2 word text2" with "<span>text2 text2 word text2</span>" and "this is a long, very long statement with punctuations." with "<span>this is a long, very long statement with punctuations.</span>" What should be the regular expression for the same?

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  • regular expression code

    - by Gaia Andreoletti
    Deal all, I need to find match between two tab delimited files files like this: File 1: ID1 1 65383896 65383896 G C PCNXL3 ID1 2 56788990 55678900 T A ACT1 ID1 1 56788990 55678900 T A PRO55 File 2 ID2 34 65383896 65383896 G C MET5 ID2 2 56788990 55678900 T A ACT1 ID2 2 56788990 55678900 T A HLA what I would like to do is to retrive the matching line between the two file. What I would like to match is everyting after the gene ID So far I have written this code but unfortunately perl keeps giving me the error: use of "Use of uninitialized value in pattern match (m//)" Could you please help me figure out where i am doing it wrong? Thank you in advance! use strict; open (INA, $ARGV[0]) || die "cannot to open gene file"; open (INB, $ARGV[1]) || die "cannot to open coding_annotated.var files"; my @sample1 = <INA>; my @sample2 = <INB>; foreach my $line (@sample1) { my @tab = split (/\t/, $line); my $chr = $tab[1]; my $start = $tab[2]; my $end = $tab[3]; my $ref = $tab[4]; my $alt = $tab[5]; my $name = $tab[6]; foreach my $item (@sample2){ my @fields = split (/\t/,$item); if ($fields[1]=~ m/$chr(.*)/ && $fields[2]=~ m/$start(.*)/ && $fields[4]=~ m/$ref(.*)/ && $fields[5]=~ m/$alt(.*)/&& $fields[6]=~ m/$name(.*)/){ print $line,"\n",$item; } } }

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  • Java String.split

    - by user903772
    I have the following text: ARIYALUR:ARIYALUR|CHENNAI:CHENNAI|COIMBATORE:COIMBATORE|CUDDALORE:CUDDALORE|DINDIGUL:DINDIGUL|ERODE:ERODE|KANCHEEPURAM:KANCHEEPURAM|KANYAKUMARI:KANYAKUMARI|KRISHNAGIRI:KRISHNAGIRI|MADURAI:MADURAI|NAMAKKAL:NAMAKKAL|NILGIRIS:NILGIRIS|PERAMBALUR:PERAMBALUR|PONDICHERRY:PONDICHERRY|SALEM:SALEM|THANJAVUR:THANJAVUR|THENI:THENI|THIRUVALLUR:THIRUVALLUR|THOOTHUKUDI:THOOTHUKUDI|TIRUNELVELI:TIRUNELVELI|VELLORE:VELLORE|VILLUPURAM:VILLUPURAM|VIRUDHUNAGAR:VIRUDHUNAGAR| I tried to do a split("|") but my array is made up of alphabets and not each district. Please help.

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  • Extract a regular expression match in R version 2.10

    - by tovare
    Hi, I'm trying to extract a number from a string. And do something like this [0-9]+ on this string "aaaa12xxxx" and get "12". I thought it would be something like: > grep("[0-9]+","aaa12xxx", value=TRUE) [1] "aaa12xxx" And then I figured... > sub("[0-9]+", "\\1", "aaa12xxxx") [1] "aaa12xxx" But I got some form of response doing: > sub("[0-9]+", "ARGH!", "aaa12xxxx") [1] "aaaARGH!xxx" There's a small detail I'm missing Please advice :-) I'm using R version 2.10.1 (2009-12-14) Thanks ! Comments on the solution The best solution is to ignore the standard functions and install Hadley Wickham's stringr package to get something that actually makes sense. Kudos to Marek for figuring out how the standard library worked.

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  • Issue with my regular expression?

    - by Rubans
    I'm trying to locate the number matches in a relative path for directory up references("..\"). So I have the following pattern : "(..\)" which works as expected for the path "....\a\b" where it will give me 2 successfull groups ("..\") but when I try the path "..\a\b" it will also return 2 when it should be 1. I tried this in a reg ex tool such Expresso and it seems to work as expected in there but not in in .net, any ideas?

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  • Python comparing string against several regular expressions

    - by maerics
    I'm pretty experienced with Perl and Ruby but new to Python so I'm hoping someone can show me the Pythonic way to accomplish the following task. I want to compare several lines against multiple regular expressions and retrieve the matching group. In Ruby it would be something like this: STDIN.each_line do |line| case line when /^A:(.*?)$/ then puts "FOO: #{$1}" when /^B:(.*?)$/ then puts "BAR: #{$1}" # when ... else puts "NO MATCH: #{line}" end end My attempts in Python are turning out pretty ugly because the matching group is returned from a call to match/search on a regular expression and Python has no assignment in conditionals or switch statements. What's the Pythonic way to do (or think!) about this problem?

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  • Redirect visitor with .htaccess

    - by Aaron
    Hi all, I've got an e-shop on a virtual server that's been used as a subdirectory for the last few years, but now I'm finally giving the VS it's own domain name. What I really need is visitors to the old URL to be transparently (and 301) redirected to the new URL with everything after /eshop/ maintained and apended to the new host. I.e. http://www.example.com/eshop/page.php - http://www.newdomain.com/page.php Any help would be greatly appreciated.

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  • questions on nfa and dfa..

    - by Loop
    Hi Guys... Hope you help me with this one.... I have a main question which is ''how to judge whether a regular expression will be accepted by NFA and/or DFA? For eg. My question says that which of the regular expressions are equivalent? explain... 1.(a+b)*b(a+b)*b(a+b)* 2.a*ba*ba* 3.a*ba*b(a+b)* do we have to draw the NFA and DFA and then find through minimisation algorithm? if we do then how do we come to know that which regular expression is accepted by NFA/DFA so that we can begin with the answer? its so confusing.... Second is a very similar one, the question asks me to show that the language (a^nb^n|n1} is not accepted by DFA...grrrrr...how do i know this? (BTW this is a set of all strings of where a number of a's is followed by the same number of b's).... I hope I explained clearly well....

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  • Modify a reference numbered group to match against

    - by StuperUser
    I want to match YYYY-YY for sequential years. I at moment I'm trying to match where all the second YY is the 3rd and 4th characters in YYYY with 1 added to it. So far I've got {19|20}(\d{2})-(\d{2}), but not sure how to use ? with reference to (1) or whether I'm going about this the right way and finding out the inevitable "unknown unknowns" (like YY99) with this approach? Edit: Matches: 2010-11,2011-12,2029-30 Not matches: 2010-12, 2010-09,2011-2,2011-2012

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  • Remove newlines and spaces

    - by Cosmin
    How can I remove newline between <table> .... </table> and add \n after each ex: <table border="0" cellspacing="0" cellpadding="0" width="450" class="descriptiontable"><tr> <td width="50%" valign="top"> <span class="displayb">Model Procesor:</span> Intel Celeron<br><span class="displayb">Frecventa procesor (MHz):</span> 2660<br><span class="displayb">Placa Video:</span> Intel Extreme Graphics 2<br><span class="displayb">Retea integrata:</span> 10/100Mbps, RJ-45<br><span class="displayb">Chipset:</span> Intel 845G<br> </td> <td width="50%" valign="top"> <span class="displayb">Capacitate RAM (MB):</span> 512<br><span class="displayb">Tip RAM:</span> DDR<br> </td> </tr></table> and become : <table border="0" cellspacing="0" cellpadding="0" width="450" class="descriptiontable"><tr><td width="50%" valign="top"><span class="displayb">Model Procesor:</span> Intel Celeron<br><span class="displayb">Frecventa procesor (MHz):</span> 2660<br><span class="displayb">Placa Video:</span> Intel Extreme Graphics 2<br><span class="displayb">Retea integrata:</span> 10/100Mbps, RJ-45<br><span class="displayb">Chipset:</span> Intel 845G<br></td><td width="50%" valign="top"><span class="displayb">Capacitate RAM (MB):</span> 512<br><span class="displayb">Tip RAM:</span> DDR<br></td></tr></table>\n s.

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  • perl ENV value avoid escape

    - by Michael
    In my makefile I have command in variable like this substitute := perl -p -e 's/@([^@]+)@/"$(update_url)"/ge' > output.txt update_url := em:updateURL=\"http:\/\/bla\/update.rdf\"\n this works fine when I run command in target and I have newline, quotes however I need to replace $(update_url)" with environment variable, using expression like this #substitute := perl -p -e 's/@([^@]+)@/defined $$ENV{$$1} ? $$ENV{$$1} : $$1/ge' I am exporting those variables from makefile. This gives me literally em:updateURL=\"http:\/\/bla\/update.rdf\"\n on output file... so how to make the second version to give output like first version?

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  • A "smart" (forgiving) date parser?

    - by jdmuys
    I have to migrate a very large dataset from one system to another. One of the "source" column contains a date but is really a string with no constraint, while the destination system mandates a date in the format yyyy-mm-dd. Many, but not all, of the source dates are formatted as yyyymmdd. So to coerce them to the expected format, I do (in Perl): return "$1-$2-$3" if ($val =~ /(\d{4})[-\/]*(\d{2})[-\/]*(\d{2})/); The problem arises when the source dates moves away from the "generic" yyyymmdd. The goal is to salvage as many dates as possible, before giving up. Example source strings include: 21/3/1998, March 2004, 2001, 3/4/97 I can try to match as many of the examples I can find with a succession of regular expressions such as the one above. But is there something smarter to do? Am I not reinventing the wheel? Is there a library somewhere doing something similar? I couldn't find anything relevant googling "forgiving date parser". (any language is OK).

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  • Regular Expression Question

    - by zyq524
    I'm trying to use regular expression to extract the comments in the heading of a file. For example, the source code may look like: //This is an example file. //Please help me. #include "test.h" int main() //main function { ... } What I want to extract from the code are the first two lines, i.e. //This is an example file. //Please help me. Any idea?

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