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  • Do ORMs normally allow circular relations? If so, how would they handle it?

    - by SeanJA
    I was hacking around trying to make a basic orm that has support for the one => one and one => many relationships. I think I succeeded somewhat, but I am curious about how to handle circular relationships. Say you had something like this: user::hasOne('car'); car::hasMany('wheels'); car::property('type'); wheel::hasOne('car'); You could then do this (theoretically): $u = new user(); echo $u->car->wheels[0]->car->wheels[1]->car->wheels[2]->car->wheels[3]->type; #=> "monster truck" Now, I am not sure why you would want to do this. It seems like it wastes a whole pile of memory and time just to get to something that could have been done in a much shorter way. In my small ORM, I now have 4 copies of the wheel class, and 4 copies of the car class in memory, which causes a problem if I update one of them and save it back to the database, the rest get out of date, and could overwrite the changes that were already made. How do other ORMs handle circular references? Do they even allow it? Do they go back up the tree and create a pointer to one of the parents? DO they let the coder shoot themselves in the foot if they are silly enough to go around in circles?

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  • JAXB, how to marshal without a namespace

    - by Alvin
    I have a fairly large repetitive XML to create using JAXB. Storing the whole object in the memory then do the marshaling takes too much memory. Essentially, my XML looks like this: <Store> <item /> <item /> <item /> ..... </Store> Currently my solution to the problem is to "hard code" the root tag to an output stream, and marshal each of the repetitive element one by one: aOutputStream.write("<?xml version="1.0"?>") aOutputStream.write("<Store>") foreach items as item aMarshaller.marshall(item, aOutputStream) end aOutputStream.write("</Store>") aOutputStream.close() Somehow the JAXB generate the XML like this <Store xmlns="http://stackoverflow.com"> <item xmlns="http://stackoverflow.com"/> <item xmlns="http://stackoverflow.com"/> <item xmlns="http://stackoverflow.com"/> ..... </Store> Although this is a valid XML, but it just look ugly, so I'm wonder is there any way to tell the marshaller not to put namespace for the item elements? Or is there better way to use JAXB to serialize to XML chunk by chunk?

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  • Animation management in COCOS2D iphone.

    - by shreya
    Hi All, I have near about 255 image frames for background animation, 99 frames of enemy sprite and 125 frames of player sprite. All animations are running simultaneously on the screen. That is background animation is running and 4-5 enemies are on the screen are present at a time, also player is there at the same time. Take a look at the code below, CCAnimation *_enemyAnimation = [CCAnimation animationWithName:@"Enemy" delay:0.1f]; for (int i = 1; i<99; i++) { [_enemyAnimation addFrameWithFilename:[NSString stringWithFormat:@"enemy %02d.jpg",i]]; } id action1 = [CCAnimate actionWithAnimation: _enemyAnimation]; [_enemySprite runAction:[CCRepeatForever actionWithAction: action1]]; [self schedule:@selector(BackToGameLogic:) interval:5.0]; This makes my game too slower and consumes memory about 65MB in the allocations. How should I manage my animations so there will be improvement in speed and memory consumption will be reduced?. Please suggest me the way. Thanks.

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  • How do virtual destructors work?

    - by Prabhu
    Few hours back I was fiddling with a Memory Leak issue and it turned out that I really got some basic stuff about virtual destructors wrong! Let me put explain my class design. class Base { virtual push_elements() {} }; class Derived:public Base { vector<int> x; public: void push_elements(){ for(int i=0;i <5;i++) x.push_back(i); } }; void main() { Base* b = new Derived(); b->push_elements(); delete b; } The bounds checker tool reported a memory leak in the derived class vector. And I figured out that the destructor is not virtual and the derived class destructor is not called. And it surprisingly got fixed when I made the destructor virtual. Isn't the vector deallocated automatically even if the derived class destructor is not called? Is that a quirk in BoundsChecker tool or is my understanding of virtual destructor wrong?

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  • Virtual destructor - How does it work?

    - by Prabhu
    Hello All, Few hours back I was fiddling with a Memory Leak issue and it turned out that I really got some basic stuff about virtual destructor wrong!! Let me put explain my class design. class Base { virtual push_elements()<br>{}<br> }; class Derived:public Base { vector<int> x; public: void push_elements(){ for(int i=0;i <5;i++) x.push_back(i); } }; void main() { Base* b = new Derived(); b->push_elements(); delete b; } The bounds checker tool reported a memory leak in the derived class vector. And I figured out that the destructor is not virtual and the derived class destructor is not called.And it surprisingly got fixed when I made the destructor virtual. But my question is "isn't the vector deallocated automatically even if the derived class destructor is not called"? Is that a quirk in BoundsChecker tool or is my understanding of virtual destructor is wrong:)

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  • Loading/Displaying large amount of data on webpage.

    - by jb
    I have a webpage which contains a table for displaying a large amount of data (on average from 2,000 to 10,000 rows). This page takes a long time to load/render. Which is understandable. The problem is, while the page is loading the PCs memory usage skyrockets (500mb on my test system is in use by iexplorer) and the whole PC grinds to a halt until it has finished, which can take a minute or two. IE hangs until it is complete, switching to another running program is the same. I need to fix this - and ideally i want to accomplish 2 things: 1) Load individual parts of the page seperately. So the page can render initially without the large data table. A loading div will be placed there until it is ready. 2) Dont use up so much memory or local resources while rendering - so at least they can use a different tab/application at the same time. How would I go about doing both or either of these? I'm an applications programmer by trade so i am still a little fizzy on the things I can do in a web environment. Cheers all.

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  • Problem of Sprites and labels are displayed by white boxes.

    - by srikanth rongali
    I am writing a game in cocos2d. I am using a function restartDirector in AppDelegate class. -(void)restartDirector{ [[CCDirector sharedDirector] end]; [[CCDirector sharedDirector] release]; if( ! [CCDirector setDirectorType:CCDirectorTypeDisplayLink] ) [CCDirector setDirectorType:CCDirectorTypeDefault]; [[CCDirector sharedDirector] setPixelFormat:kPixelFormatRGBA8888]; [CCTexture2D setDefaultAlphaPixelFormat:kTexture2DPixelFormat_RGBA8888]; [[CCDirector sharedDirector] setAnimationInterval:1.0/60]; [[CCDirector sharedDirector] setDisplayFPS:YES]; [[CCDirector sharedDirector] setDeviceOrientation:CCDeviceOrientationLandscapeLeft]; [[CCDirector sharedDirector] attachInView:window]; } This function I called in one of the game Scene . -(void)PracticeMethod:(id)sender { [MY_DELEGATE restartDirector]; CCScene *endPageScene = [CCScene node]; CCLayer *endPageLayer = [DummyScene node]; [endPageScene addChild:endPageLayer]; [[CCDirector sharedDirector] runWithScene:endPageScene]; // [[CCDirector sharedDirector] replaceScene:endPageScene]; } When used the replaceScene, there is no problem in game but the memory of abject allocation is high(I checked in leaks tool). So I used runWithScene. But , while using these when the scene DummyScene is loaded the sprites, labels in it are displayed by white boxes. I cannot see the sprites and labels. If I am using replaceScene everything thing is working fine but the memory allocation is high. this is my problem. Thank you.

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  • handle large Parcelable ArrayList in Android

    - by Gal Ben-Haim
    I'm developing an Android app that is a client to a JSON webservice API. I have classes of resource objects (some are nested) and I pass results from an IntentService that access the webserive using the Parcelable interface for all the resource classes. the webservice returns arrays or results that can be potentially large (because of the nesting, for example, a post object also contains comments array, each comment also contains a user object). currently I'm either inserting the results into a SQlite database or displaying them in a ListView. (my relevant methods are accepting ArrayList<resourceClass> as arguments). (some data need to be persistent stored and some should not). since I don't know what size of lists I can handle this way without reaching the memory limits, is this a good practice ? is it a better idea to save the parsed JSON to a local file immediately and pass the file path to the ResultReceiver, then either insert to database from that file or display the data ? is there a better way to handle this ? btw - I'm parsing the JSON as a stream with Gson's Reader so there shouldn't be memory issues at that stage.

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  • Progressively stream the output of an ASP.NET page - or render a page outside of an HTTP request

    - by Evgeny
    I have an ASP.NET 2.0 page with many repeating blocks, including a third-party server-side control (so it's not just plain HTML). Each is quite expensive to generate, in terms of both CPU and RAM. I'm currently using a standard Repeater control for this. There are two problems with this simple approach: The entire page must be rendered before any of it is returned to the client, so the user must wait a long time before they see any data. (I write progress messages using Response.Write, so there is feedback, but no actual results.) The ASP.NET worker process must hold everything in memory at the same time. There is no inherent needs for this: once one block is processed it won't be changed, so it could be returned to the client and the memory could be freed. I would like to somehow return these blocks to the client one at a time, as each is generated. I'm thinking of extracting the stuff inside the Repeater into a separate page and getting it repeatedly using AJAX, but there are some complications involved in that and I wonder if there is some simper approach. Ideally I'd like to keep it as one page (from the client's point of view), but return it incrementally. Another way would be to do something similar, but on the server: still create a separate page, but have the server access it and then Response.Write() the HTML it gets to the response stream for the real client request. Is there a way to avoid an HTTP request here, though? Is there some ASP.NET method that would render a UserControl or a Page outside of an HTTP request and simply return the HTML to me as a string? I'm open to other ideas on how to do this as well.

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  • Splitting a set of object into several subsets of 'similar' objects

    - by doublep
    Suppose I have a set of objects, S. There is an algorithm f that, given a set S builds certain data structure D on it: f(S) = D. If S is large and/or contains vastly different objects, D becomes large, to the point of being unusable (i.e. not fitting in allotted memory). To overcome this, I split S into several non-intersecting subsets: S = S1 + S2 + ... + Sn and build Di for each subset. Using n structures is less efficient than using one, but at least this way I can fit into memory constraints. Since size of f(S) grows faster than S itself, combined size of Di is much less than size of D. However, it is still desirable to reduce n, i.e. the number of subsets; or reduce the combined size of Di. For this, I need to split S in such a way that each Si contains "similar" objects, because then f will produce a smaller output structure if input objects are "similar enough" to each other. The problems is that while "similarity" of objects in S and size of f(S) do correlate, there is no way to compute the latter other than just evaluating f(S), and f is not quite fast. Algorithm I have currently is to iteratively add each next object from S into one of Si, so that this results in the least possible (at this stage) increase in combined Di size: for x in S: i = such i that size(f(Si + {x})) - size(f(Si)) is min Si = Si + {x} This gives practically useful results, but certainly pretty far from optimum (i.e. the minimal possible combined size). Also, this is slow. To speed up somewhat, I compute size(f(Si + {x})) - size(f(Si)) only for those i where x is "similar enough" to objects already in Si. Is there any standard approach to such kinds of problems? I know of branch and bounds algorithm family, but it cannot be applied here because it would be prohibitively slow. My guess is that it is simply not possible to compute optimal distribution of S into Si in reasonable time. But is there some common iteratively improving algorithm?

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  • Drawing an image in Java, slow as hell on a netbook.

    - by Norswap
    In follow-up to my previous questions (especially this one : http://stackoverflow.com/questions/2684123/java-volatileimage-slower-than-bufferedimage), i have noticed that simply drawing an Image (it doesn't matter if it's buffered or volatile, since the computer has no accelerated memory*, and tests shows it's doesn't change anything), tends to be very long. (*) System.out.println(GraphicsEnvironment.getLocalGraphicsEnvironment() .getDefaultScreenDevice().getAvailableAcceleratedMemory()); --> 0 How long ? For a 500x400 image, about 0.04 seconds. This is only drawing the image on the backbuffer (obtained via buffer strategy). Now considering that world of warcraft runs on that netbook (tough it is quite laggy) and that online java games seems to have no problem whatsoever, this is quite thought provoking. I'm quite certain I didn't miss something obvious, I've searched extensively the web, but nothing will do. So do any of you java whiz have an idea of what obscure problem might be causing this (or maybe it is normal, tough I doubt it) ? PS : As I'm writing this I realized this might be cause by my Linux installation (archlinux) tough I have the correct Intel driver. But my computer normally has "Integrated Intel Graphics Media Accelerator 950", which would mean it should have accelerated video memory somehow. Any ideas about this side of things ?

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  • jQuery "best practices" is an oxymoron [closed]

    - by n00b
    jQuery "best practices", oxymoron for several reasons sadly To speak candidly, the entire jQuery library has a HIGHLY inconsistent API, and virtually no coding standards. It's basically a subset of JavaScript, a new language if you will, which is probably the most confusing part for normal javascript developers. In my opinion, use normal JavaScript where possible to save on memory consumption. Or, better yet, use a professional tool like YUI. If you already come from a javascript background, you will appreciate it much more than jQuery because it doesn't have n00b wrappers around everything. In tools like YUI, you interact directly with the native DOM to do things, instead of a super-jQuery object that tries to do everything. I'll get voted down for saying the truth. Don't get me wrong, jQuery is cool if you wanna throw something flashy up quick, but if you're going to build a larger app you're going to need a more refined tool (especially since jQuery leaks memory like no other once you start chaining too much things). jQuery does have one of the lowest learning curves, and you won't outgrow it for awhile, but when you do it will be highly apparent and tedious to merge to something else. over 60 years programming experience someone clean this up and community wiki please

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  • I need help on this data file to be edited in SOM_PAK format

    - by Mola
    Hi Experts, I am working on Self Organizing Map (SOM) Implementation and i have a microarray dataset which i am trying to read in using some_read_data function, but i keep having an errors when i edit it to have it in SOM_PAK form which is recognise by SOM for reading such as ??? Error using == somtoolbox\som_read_data.m Only 69 vector components on input file data line 1 (dimension is 70) Error in == SomMainFunction at 3 sD = som_read_data('B_r2.txt'); but when i try to read the data without editing which is the original file as shown here: http://rapidshare.com/files/376239367/DLBCL.txt.html It indicates "Data read OK", but i have the following error ??? Error using == unknown Out of memory. Type HELP MEMORY for your options. Error in == somtoolbox\som_bmus.m at 189 Bmus = zeros(dlen,length(which_bmus)); Error in == somvis\somvis_p_matrix.m at 41 [dummy dists] = som_bmus (dat, dat, 2:datlen); Error in == SomMainFunction at 16 [pheight rad_real perc] = somvis_p_matrix(sM,sD); You can get the datafile from here:http://rapidshare.com/files/376239367/DLBCL.txt.html I need someone to help me correct this data for me and put it in SOM_PAK format. I have tried getting it in SOM_PAK format, but it still giving me errors:

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  • Can I do this?? Trying to load an object from within itself.

    - by Smikey
    Hi all! I have an object which conforms to the NSCoding protocol. The object contains a method to save itself to memory, like so: - (void)saveToFile { NSMutableData *data = [[NSMutableData alloc] init]; NSKeyedArchiver *archiver = [[NSKeyedArchiver alloc] initForWritingWithMutableData:data]; [archiver encodeObject:self forKey:kDataKey]; [archiver finishEncoding]; [data writeToFile:[self dataFilePath] atomically:YES]; [archiver release]; [data release]; } This works just fine. But I would also like to initialise an empty version of this object and then call its own 'Load' method to load whatever data exists on file into its variables. So I've created the following: - (void)loadFromFile { NSString *filePath = [self dataFilePath]; if ([[NSFileManager defaultManager] fileExistsAtPath:filePath]) { NSData *data = [[NSMutableData alloc] initWithContentsOfFile:[self dataFilePath]]; NSKeyedUnarchiver *unarchiver = [[NSKeyedUnarchiver alloc] initForReadingWithData:data]; self = [unarchiver decodeObjectForKey:kDataKey]; [unarchiver finishDecoding]; } } Now this second method doesn't manage to load any variables. Is this line not possible perhaps? self = [unarchiver decodeObjectForKey:kDataKey]; Ultimately I would like to use the code like this: One viewController takes user entered input, creates an object and saves it to memory using [anObject saveToFile]; And a second viewController creates an empty object, then initialises its values to those stored on file by calling: [emptyObject loadFromFile]; Any suggestions on how to make this work would be hugely appreciated. Thanks :) Michael

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  • UIImagePickerController crashes on rapid scrolling, slower than photos app

    - by vvanhee
    Most of the time, my image picker works perfectly (iOS 4.2.1). However, if I scroll very rapidly up and down about 4-6 times through my camera roll of about 300 photos, I get a crash. This never happens with the "photos" app on the same iPhone 3Gs. Also, I'm noticing that the stock "photos" app scrolls much more smoothly than my image picker. Has anyone else noticed this behavior? I'd be interested if others could attempt this in their own apps and see if they crash. I don't think it's related to other objects hogging memory on my iPhone because it's a simple app, and this happens right after I start the app. It also doesn't seem to be related to messages sent to other released objects or overreleasing of other objects in viewdidunload, based on my crash logs and the fact that the simulator responds well to simulated memory warnings. I think it might be a bug in the internal implementation of the UIImagePickerController... This is how I start the picker. I've done this multiple ways (including setting a retain property for the UIImagePickerController in my header and releasing on dealloc). This seems to be the best way (crashes least): UIImagePickerController *picker = [[UIImagePickerController alloc] init]; picker.delegate = self; picker.sourceType = UIImagePickerControllerSourceTypeSavedPhotosAlbum; picker.allowsEditing = YES; [self presentModalViewController:picker animated:YES]; [picker release]; This is the crashed thread (I get various exception types): Exception Type: SIGSEGV Exception Codes: SEGV_ACCERR at 0xfffffffff4faafa4 Crashed Thread: 8 ... Thread 8 Crashed: 0 CoreFoundation 0x000494ea -[__NSArrayM replaceObjectAtIndex:withObject:] + 98 1 PhotoLibrary 0x00008e0f -[PLImageTable _segmentAtIndex:] + 527 2 PhotoLibrary 0x00008a21 -[PLImageTable _mappedImageDataAtIndex:] + 221 3 PhotoLibrary 0x0000893f -[PLImageTable dataForEntryAtIndex:] + 15 4 PhotoLibrary 0x000087e7 PLThumbnailManagerImageDataAtIndex + 35 5 PhotoLibrary 0x00008413 -[PLThumbnailManager _dataForPhoto:format:width:height:bytesPerRow:dataWidth:dataHeight:imageDataOffset:imageDataFormat:preheat:] + 299 6 PhotoLibrary 0x000b6c13 __-[PLThumbnailManager preheatImageDataForImages:withFormat:]_block_invoke_1 + 159 7 libSystem.B.dylib 0x000d6680 _dispatch_call_block_and_release + 20 8 libSystem.B.dylib 0x000d6ba0 _dispatch_worker_thread2 + 128 9 libSystem.B.dylib 0x0007b251 _pthread_wqthread + 265

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  • Converting contents of a byte array to wchar_t*

    - by Christopher MacKinnon
    I seem to be having an issue converting a byte array (containing the text from a word document) to a LPTSTR (wchar_t *) object. Every time the code executes, I am getting a bunch of unwanted Unicode characters returned. I figure it is because I am not making the proper calls somewhere, or not using the variables properly, but not quite sure how to approach this. Hopefully someone here can guide me in the right direction. The first thing that happens in we call into C# code to open up Microsoft Word and convert the text in the document into a byte array. byte document __gc[]; document = word->ConvertToArray(filename); The contents of document are as follows: {84, 101, 115, 116, 32, 68, 111, 99, 117, 109, 101, 110, 116, 13, 10} Which ends up being the following string: "Test Document". Our next step is to allocate the memory to store the byte array into a LPTSTR variable, byte __pin * value; value = &document[0]; LPTSTR image; image = (LPTSTR)malloc( document->Length + 1 ); Once we execute the line where we start allocating the memory, our image variable gets filled with a bunch of unwanted Unicode characters: ????????????????? And then we do a memcpy to transfer over all of the data memcpy(image,value,document->Length); Which just causes more unwanted Unicode characters to appear: ????????????????? I figure the issue that we are having is either related to how we are storing the values in the byte array, or possibly when we are copying the data from the byte array to the LPTSTR variable. Any help with explaining what I'm doing wrong, or anything to point me in the right direction will be greatly appreciated.

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  • Field Members vs Method Variables?

    - by Braveyard
    Recently I've been thinking about performance difference between class field members and method variables. What exactly I mean is in the example below : Lets say we have a DataContext object for Linq2SQL class DataLayer { ProductDataContext context = new ProductDataContext(); public IQueryable<Product> GetData() { return context.Where(t=>t.ProductId == 2); } } In the example above, context will be stored in heap and the GetData method variables will be removed from Stack after Method is executed. So lets examine the following example to make a distinction : class DataLayer { public IQueryable<Product> GetData() { ProductDataContext context = new ProductDataContext(); return context.Where(t=>t.ProductId == 2); } } (*1) So okay first thing we know is if we define ProductDataContext instance as a field, we can reach it everywhere in the class which means we don't have to create same object instance all the time. But lets say we are talking about Asp.NET and once the users press submit button the post data is sent to the server and the events are executed and the posted data stored in a database via the method above so it is probable that the same user can send different data after one another.If I know correctly after the page is executed, the finalizers come into play and clear things from memory (from heap) and that means we lose our instance variables from memory as well and after another post, DataContext should be created once again for the new page cycle. So it seems the only benefit of declaring it publicly to the whole class is the just number one text above. Or is there something other? Thanks in advance... (If I told something incorrect please fix me.. )

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  • different thread accessing MemoryStream

    - by Wayne
    There's a bit of code which writes data to a MemoryStream object directly into it's data buffer by calling GetBuffer(). It also uses and updates the Position and SetLength() properties appropriately. This code works purposes 99.9999% of the time. Literally. Only every so many 100,000's of iterations it will barf. The specific problem is that the memory.Position property suddenly returns zero instead of the appropriate value. However, code was added that checks for the 0 and throws an exception which include log of the MemoryStream properties like Position and Length in a separate method. Those return the correct value. Further addition shows that when this rare condition occurs, the memory.Position only has zero inside this particular method. Okay. Obviously, this must be a threading issue. But this code is well locked. However, the nature of this software is that it's organized by "tasks" with a scheduler and so any one of several actual O/S thread may run this code at any give time--but never more than one at a time. So it's my guess that ordinarily it so happens that the same thread keeps getting used for this method and then on a rare occasion a different thread get used. Then due to compiler optimizations, the different thread never gets the correct value. It gets a "stale" value. Ordinarily in a situation like this I would apply a "volatile" keyword to the variable in question. But that (those) variables are inside the MemoryStream object. Does anyone have any other idea? Or does this mean we have to implement our own MemoryStream object? (Just like we end up having to do with practically every collection in .NET?) It's a shame to have such an awesome platform as .NET and have virtually the entire system useless as-is for seriously parallelized applications. If I'm wrong or you have other ideas, please advise. Sincerely, Wayne

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  • How slow are bit fields in C++

    - by Shane MacLaughlin
    I have a C++ application that includes a number of structures with manually controlled bit fields, something like #define FLAG1 0x0001 #define FLAG2 0x0002 #define FLAG3 0x0004 class MyClass { ' ' unsigned Flags; int IsFlag1Set() { return Flags & FLAG1; } void SetFlag1Set() { Flags |= FLAG1; } void ResetFlag1() { Flags &= 0xffffffff ^ FLAG1; } ' ' }; For obvious reasons I'd like to change this to use bit fields, something like class MyClass { ' ' struct Flags { unsigned Flag1:1; unsigned Flag2:1; unsigned Flag3:1; }; ' ' }; The one concern I have with making this switch is that I've come across a number of references on this site stating how slow bit fields are in C++. My assumption is that they are still faster than the manual code shown above, but is there any hard reference material covering the speed implications of using bit fields on various platforms, specifically 32bit and 64bit windows. The application deals with huge amounts of data in memory and must be both fast and memory efficient, which could well be why it was written this way in the first place.

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  • Copy constructor demo (crashing...)

    - by AKN
    Here is the program... class CopyCon { public: char *name; CopyCon() { name = new char; } CopyCon(const CopyCon &objCopyCon) { name = new char; _tcscpy(name,objCopyCon.name); } ~CopyCon() { if( name != NULL ) { delete name; name = NULL; } } }; int main() { CopyCon objCopyCon1; objCopyCon1.name = "Hai"; CopyCon objCopyCon2(objCopyCon1); objCopyCon1.name = "Hello"; cout<<objCopyCon2.name<<endl; return 0; } Once the code execution completes, when the destructor called, it crashes on 'delete' saying... Debug Error! Program: ... HEAP CORRUPTION DETECTED: after Normal block (#124) at 0x00366990. CRT detected that the application wrote to memory after end of heap buffer. (Press Retry to debug the application) Don't we have to clear the heap memory in destructor. What's wrong with this program? Pls someone help! Copy constructor works perfectly as intended. But still... !?

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  • On Disk Substring index

    - by emeryc
    I have a file (fasta file to be specific) that I would like to index, so that I can quickly locate any substring within the file and then find the location within the original fasta file. This would be easy to do in many cases, using a Trie or substring array, unfortunately the strings I need to index are 800+ MBs which means that doing them in memory in unacceptable, so I'm looking for a reasonable way to create this index on disk, with minimal memory usage. (edit for clarification) I am only interested in the headers of proteins, so for the largest database I'm interested in, this is about 800 MBs of text. I would like to be able to find an exact substring within O(N) time based on the input string. This must be useable on 32 bit machines as it will be shipped to random people, who are not expected to have 64 bit machines. I want to be able to index against any word break within a line, to the end of the line (though lines can be several MBs long). Hopefully this clarifies what is needed and why the current solutions given are not illuminating. I should also add that this needs to be done from within java, and must be done on client computers on various operating systems, so I can't use any OS Specific solution, and it must be a programatic solution.

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  • Best Functional Approach

    - by dbyrne
    I have some mutable scala code that I am trying to rewrite in a more functional style. It is a fairly intricate piece of code, so I am trying to refactor it in pieces. My first thought was this: def iterate(count:Int,d:MyComplexType) = { //Generate next value n //Process n causing some side effects return iterate(count - 1, n) } This didn't seem functional at all to me, since I still have side effects mixed throughout my code. My second thought was this: def generateStream(d:MyComplexType):Stream[MyComplexType] = { //Generate next value n return Stream.cons(n, generateStream(n)) } for (n <- generateStream(initialValue).take(2000000)) { //process n causing some side effects } This seemed like a better solution to me, because at least I've isolated my functional value-generation code from the mutable value-processing code. However, this is much less memory efficient because I am generating a large list that I don't really need to store. This leaves me with 3 choices: Write a tail-recursive function, bite the bullet and refactor the value-processing code Use a lazy list. This is not a memory sensitive app (although it is performance sensitive) Come up with a new approach. I guess what I really want is a lazily evaluated sequence where I can discard the values after I've processed them. Any suggestions?

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  • MapView EXC_BAD_ACCESS (SIGSEGV) and KERN_INVALID_ADDRESS

    - by user768113
    I'm having some 'issues' with my application... well, it crashes in an UIViewController that is presented modally, there the user enters information through UITextFields and his location is tracked by a MapView. Lets call this view controller "MapViewController" When the user submits the form, I call a different ViewController - modally again - that processes this info and a third one answers accordingly, then go back to a MenuVC using unwinding segues, which then calls MapViewController and so on. This sequence is repeated many times, but it always crashes in MapViewController. Looking at the crash log, I think that the MapView can be the problem of this or some element in the UI (because of the UIKit framework). I tried to use NSZombie in order to track a memory issue but it doesn't give me a clue about whats happening. Here is the crash log Hardware Model: iPad3,4 Process: MyApp [2253] OS Version: iOS 6.1.3 (10B329) Report Version: 104 Exception Type: EXC_BAD_ACCESS (SIGSEGV) Exception Codes: KERN_INVALID_ADDRESS at 0x00000044 Crashed Thread: 0 Thread 0 name: Dispatch queue: com.apple.main-thread Thread 0 Crashed: 0 IMGSGX554GLDriver 0x328b9be0 0x328ac000 + 56288 1 IMGSGX554GLDriver 0x328b9b8e 0x328ac000 + 56206deallocated instance 2 IMGSGX554GLDriver 0x328bc2f2 0x328ac000 + 66290 3 IMGSGX554GLDriver 0x328baf44 0x328ac000 + 61252 4 libGPUSupportMercury.dylib 0x370f86be 0x370f6000 + 9918 5 GLEngine 0x34ce8bd2 0x34c4f000 + 629714 6 GLEngine 0x34cea30e 0x34c4f000 + 635662 7 GLEngine 0x34c8498e 0x34c4f000 + 219534 8 GLEngine 0x34c81394 0x34c4f000 + 205716 9 VectorKit 0x3957f4de 0x394c7000 + 754910 10 VectorKit 0x3955552e 0x394c7000 + 582958 11 VectorKit 0x394d056e 0x394c7000 + 38254 12 VectorKit 0x394d0416 0x394c7000 + 37910 13 VectorKit 0x394cb7ca 0x394c7000 + 18378 14 VectorKit 0x394c9804 0x394c7000 + 10244 15 VectorKit 0x394c86a2 0x394c7000 + 5794 16 QuartzCore 0x354a07a4 0x35466000 + 239524 17 QuartzCore 0x354a06fc 0x35466000 + 239356 18 IOMobileFramebuffer 0x376f8fd4 0x376f4000 + 20436 19 IOKit 0x344935aa 0x34490000 + 13738 20 CoreFoundation 0x33875888 0x337e9000 + 575624 21 CoreFoundation 0x338803e4 0x337e9000 + 619492 22 CoreFoundation 0x33880386 0x337e9000 + 619398 23 CoreFoundation 0x3387f20a 0x337e9000 + 614922 24 CoreFoundation 0x337f2238 0x337e9000 + 37432 25 CoreFoundation 0x337f20c4 0x337e9000 + 37060 26 GraphicsServices 0x373ad336 0x373a8000 + 21302 27 UIKit 0x3570e2b4 0x356b7000 + 357044 28 MyApp 0x000ea12e 0xe9000 + 4398 29 MyApp 0x000ea0e4 0xe9000 + 4324 I think thats all, additionally, I would like to ask you: if you are using unwind segues then you are releasing view controllers from the memory heap, right? Meanwhile, performing segues let you instantiate those controllers. Technically, MenuVC should be the only VC alive in the heap during the app life cycle if you understand me.

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  • C++ polymorphism and slicing

    - by Draco Ater
    The following code, prints out Derived Base Base But I need every Derived object put into User::items, call its own print function, but not the base class one. Can I achieve that without using pointers? If it is not possible, how should I write the function that deletes User::items one by one and frees memory, so that there should not be any memory leaks? #include <iostream> #include <vector> #include <algorithm> using namespace std; class Base{ public: virtual void print(){ cout << "Base" << endl;} }; class Derived: public Base{ public: void print(){ cout << "Derived" << endl;} }; class User{ public: vector<Base> items; void add_item( Base& item ){ item.print(); items.push_back( item ); items.back().print(); } }; void fill_items( User& u ){ Derived d; u.add_item( d ); } int main(){ User u; fill_items( u ); u.items[0].print(); }

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  • How do I implement Hibernate Pagination using a cursor (so the results stay consistent, despite new

    - by hunterae
    Hey all, Is there any way to maintain a database cursor using Hibernate between web requests? Basically, I'm trying to implement pagination, but the data that is being paged is consistently changing (i.e. new records are added into the database). We are trying to set it up such that when you do your initial search (returning a maximum of 5000 results), and you page through the results, those same records always appear on the same page (i.e. we're not continuously running the query each time next and previous page buttons are clicked). The way we're currently implementing this is by merely selecting 5000 (at most) primary keys from the table we're paging, storing those keys in memory, and then just using 20 primary keys at a time to fetch their details from the database. However, we want to get away from having to store these keys in memory and would much prefer a database cursor that we just keep going back to and moving backwards and forwards over the cursor to generate pages. I tried doing this with Hibernate's ScrollableResults but found that I could not call methods like next() and previous() would cause an exception if you within a different web request / Hibernate session (no surprise there). Is there any way to reattach a ScrollableResults object to a Session, much the same way you would reattach a detached database object to make it persistent? Are there any other approaches to implement this data paging with consistent paging results without caching the primary keys?

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