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  • Processing a log to fix a malformed IP address ?.?.?.x

    - by skymook
    I would like to replace the first character 'x' with the number '7' on every line of a log file using a shell script. Example of the log file: 216.129.119.x [01/Mar/2010:00:25:20 +0100] "GET /etc/.... 74.131.77.x [01/Mar/2010:00:25:37 +0100] "GET /etc/.... 222.168.17.x [01/Mar/2010:00:27:10 +0100] "GET /etc/.... My humble beginnings... #!/bin/bash echo Starting script... cd /Users/me/logs/ gzip -d /Users/me/logs/access.log.gz echo Files unzipped... echo I'm totally lost here to process the log file and save it back to hd... exit 0 Why is the log file IP malformed like this? My web provider (1and1) has decide not to store IP address, so they have replaced the last number with the character 'x'. They told me it was a new requirement by 'law'. I personally think that is bs, but that would take us off topic. I want to process these log files with AWstats, so I need an IP address that is not malformed. I want to replace the x with a 7, like so: 216.129.119.7 [01/Mar/2010:00:25:20 +0100] "GET /etc/.... 74.131.77.7 [01/Mar/2010:00:25:37 +0100] "GET /etc/.... 222.168.17.7 [01/Mar/2010:00:27:10 +0100] "GET /etc/.... Not perfect I know, but least I can process the files, and I can still gain a lot of useful information like country, number of visitors, etc. The log files are 200MB each, so I thought that a shell script is the way to go because I can do that rapidly on my Macbook Pro locally. Unfortunately, I know very little about shell scripting, and my javascript skills are not going to cut it this time. I appreciate your help.

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  • Scipy Negative Distance? What?

    - by disappearedng
    I have a input file which are all floating point numbers to 4 decimal place. i.e. 13359 0.0000 0.0000 0.0001 0.0001 0.0002` 0.0003 0.0007 ... (the first is the id). My class uses the loadVectorsFromFile method which multiplies it by 10000 and then int() these numbers. On top of that, I also loop through each vector to ensure that there are no negative values inside. However, when I perform _hclustering, I am continually seeing the error, "Linkage Z contains negative values". I seriously think this is a bug because: I checked my values, the values are no where small enough or big enough to approach the limits of the floating point numbers and the formula that I used to derive the values in the file uses absolute value (my input is DEFINITELY right). Can someone enligten me as to why I am seeing this weird error? What is going on that is causing this negative distance error? ===== def loadVectorsFromFile(self, limit, loc, assertAllPositive=True, inflate=True): """Inflate to prevent "negative" distance, we use 4 decimal points, so *10000 """ vectors = {} self.winfo("Each vector is set to have %d limit in length" % limit) with open( loc ) as inf: for line in filter(None, inf.read().split('\n')): l = line.split('\t') if limit: scores = map(float, l[1:limit+1]) else: scores = map(float, l[1:]) if inflate: vectors[ l[0]] = map( lambda x: int(x*10000), scores) #int might save space else: vectors[ l[0]] = scores if assertAllPositive: #Assert that it has no negative value for dirID, l in vectors.iteritems(): if reduce(operator.or_, map( lambda x: x < 0, l)): self.werror( "Vector %s has negative values!" % dirID) return vectors def main( self, inputDir, outputDir, limit=0, inFname="data.vectors.all", mappingFname='all.id.features.group.intermediate'): """ Loads vector from a file and start clustering INPUT vectors is { featureID: tfidfVector (list), } """ IDFeatureDic = loadIdFeatureGroupDicFromIntermediate( pjoin(self.configDir, mappingFname)) if not os.path.exists(outputDir): os.makedirs(outputDir) vectors = self.loadVectorsFromFile( limit, pjoin( inputDir, inFname)) for threshold in map( lambda x:float(x)/30, range(20,30)): clusters = self._hclustering(threshold, vectors) if clusters: outputLoc = pjoin(outputDir, "threshold.%s.result" % str(threshold)) with open(outputLoc, 'w') as outf: for clusterNo, cluster in clusters.iteritems(): outf.write('%s\n' % str(clusterNo)) for featureID in cluster: feature, group = IDFeatureDic[featureID] outline = "%s\t%s\n" % (feature, group) outf.write(outline.encode('utf-8')) outf.write("\n") else: continue def _hclustering(self, threshold, vectors): """function which you should call to vary the threshold vectors: { featureID: [ tfidf scores, tfidf score, .. ] """ clusters = defaultdict(list) if len(vectors) > 1: try: results = hierarchy.fclusterdata( vectors.values(), threshold, metric='cosine') except ValueError, e: self.werror("_hclustering: %s" % str(e)) return False for i, featureID in enumerate( vectors.keys()):

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  • How can I prompt for input using Selenium/Webdriver and use the result?

    - by Tempus
    I would like to allow for user input and make some decisions based on it. If I do this: driver.execute_script("prompt('Enter smth','smth')") I get a nice prompt, but I cannot use it's value. Is there any way of showing an input box to the user, and use the value typed there? EDIT: This is my script: from selenium.webdriver import Firefox if __name__ == "__main__": driver = Firefox() driver.execute_script("window.promptResponse=prompt('Enter smth','smth')") a = driver.execute_script("var win = this.browserbot.getUserWindow(); return win.promptResponse") print "got back %s" % a And this exits with the following exception: a = driver.execute_script("var win = this.browserbot.getUserWindow(); return win.promptResponse") File "c:\python26\lib\site-packages\selenium-2.12.1-py2.6.egg\selenium\webdriver\remote\webdriver.py", line 385, in ex ecute_script {'script': script, 'args':converted_args})['value'] File "c:\python26\lib\site-packages\selenium-2.12.1-py2.6.egg\selenium\webdriver\remote\webdriver.py", line 153, in ex ecute self.error_handler.check_response(response) File "c:\python26\lib\site-packages\selenium-2.12.1-py2.6.egg\selenium\webdriver\remote\errorhandler.py", line 110, in check_response if 'message' in value: TypeError: argument of type 'NoneType' is not iterable What am I not doing right?

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  • With sqlalchemy how to dynamically bind to database engine on a per-request basis

    - by Peter Hansen
    I have a Pylons-based web application which connects via Sqlalchemy (v0.5) to a Postgres database. For security, rather than follow the typical pattern of simple web apps (as seen in just about all tutorials), I'm not using a generic Postgres user (e.g. "webapp") but am requiring that users enter their own Postgres userid and password, and am using that to establish the connection. That means we get the full benefit of Postgres security. Complicating things still further, there are two separate databases to connect to. Although they're currently in the same Postgres cluster, they need to be able to move to separate hosts at a later date. We're using sqlalchemy's declarative package, though I can't see that this has any bearing on the matter. Most examples of sqlalchemy show trivial approaches such as setting up the Metadata once, at application startup, with a generic database userid and password, which is used through the web application. This is usually done with Metadata.bind = create_engine(), sometimes even at module-level in the database model files. My question is, how can we defer establishing the connections until the user has logged in, and then (of course) re-use those connections, or re-establish them using the same credentials, for each subsequent request. We have this working -- we think -- but I'm not only not certain of the safety of it, I also think it looks incredibly heavy-weight for the situation. Inside the __call__ method of the BaseController we retrieve the userid and password from the web session, call sqlalchemy create_engine() once for each database, then call a routine which calls Session.bind_mapper() repeatedly, once for each table that may be referenced on each of those connections, even though any given request usually references only one or two tables. It looks something like this: # in lib/base.py on the BaseController class def __call__(self, environ, start_response): # note: web session contains {'username': XXX, 'password': YYY} url1 = 'postgres://%(username)s:%(password)s@server1/finance' % session url2 = 'postgres://%(username)s:%(password)s@server2/staff' % session finance = create_engine(url1) staff = create_engine(url2) db_configure(staff, finance) # see below ... etc # in another file Session = scoped_session(sessionmaker()) def db_configure(staff, finance): s = Session() from db.finance import Employee, Customer, Invoice for c in [ Employee, Customer, Invoice, ]: s.bind_mapper(c, finance) from db.staff import Project, Hour for c in [ Project, Hour, ]: s.bind_mapper(c, staff) s.close() # prevents leaking connections between sessions? So the create_engine() calls occur on every request... I can see that being needed, and the Connection Pool probably caches them and does things sensibly. But calling Session.bind_mapper() once for each table, on every request? Seems like there has to be a better way. Obviously, since a desire for strong security underlies all this, we don't want any chance that a connection established for a high-security user will inadvertently be used in a later request by a low-security user.

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  • Can't run os.system command in Django?

    - by danspants
    We have a Django app running on apache server (mod_python) on a windows machine which needs to call some r scripts. To do so it would be easiest to call r through os.system, however when django gets to the os.system command it freezes up. I've also tried subprocess with the same result. We have a possibly related problem in that Django can only access the file system of the machine it's on, all network drives appear to be invisible to it, which is VERY frustrating. Any ideas on both of these issues (I'm assuming it's the same limitation in both instances) would be most appreciated.

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  • GAE modeling relationship options

    - by Sway
    Hi there, I need to model the following situation and I can't seem to find a consistent example on how to do it "correctly" for the google app engine. Suppose I've got a simple situation like the following: [Company] 1 ----- M [Stare] A company has one to many stores. Each store has an address made up of a address line 1, city, state, country, postcode etc. Ok. Lets say we need to create say an "Audit". An Audit is for a company and can be across one to many stares. So something like: [Audit] 1 ------ 1 [Company] 1 ------ M [Store] Now we need to query all of the "audits" based on the Store "addresses" in order to send the "Auditors" to the right locations. There seem to be numerous articles like this one: http://code.google.com/appengine/articles/modeling.html Which give examples of creating a "ContactCompany" model class. However they also say that you should use this kind of relationship only when you "really need to" and with "care" for performance. I've also read - frequently - that you should denormalize as much as possible thereby moving all of the "query-able" data into the Audit class. So what would you suggest as the best way to solve this? I've seen that there is an Expando class but I'm not sure if that is the "best" option for this. Any help or thoughts on this would be totally appreciated. Thanks in advance, Matt

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  • Connect to a running instance of Visual Studio 2003 using COM, build and read output

    - by codeape
    For Visual Studio 6.0, I can connect to a running instance like: o = GetActiveObject("MSDev.Application") What prog ID do I use for Visual Studio 2003? How do I execute a 'Build Solution' once I have the COM object that references the VS2003 instance? How do I get the string contents of the build output window after executing the build solution command? Yes, I am aware that I can build a solution from the command line. But in this case, I need to connect to a running instance of Visual Studio. EDIT: found and submitted an answer, see below.

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  • Django : presenting a form very different from the model and with multiple field values in a Django-

    - by sebpiq
    Hi ! I'm currently doing a firewall management application for Django, here's the (simplified) model : class Port(models.Model): number = models.PositiveIntegerField(primary_key=True) application = models.CharField(max_length=16, blank=True) class Rule(models.Model): port = models.ForeignKey(Port) ip_source = models.IPAddressField() ip_mask = models.IntegerField(validators=[MaxValueValidator(32)]) machine = models.ForeignKey("vmm.machine") What I would like to do, however, is to display to the user a form for entering rules, but with a very different organization than the model : Port 80 O Not open O Everywhere O Specific addresses : --------- delete field --------- delete field + add address field Port 443 ... etc Where Not open means that there is no rule for the given port, Everywhere means that there is only ONE rule (0.0.0.0/0) for the given port, and with specific addresses, you can add as many addresses as you want (I did this with JQuery), which will make as many rules. Now I did a version completely "handmade", meaning that I create the forms entirely in my templates, set input names with a prefix, and parse all the POSTed stuff in my view (which is quite painful, and means that there's no point in using a web framework). I also have a class which aggregates the rules together to easily pre-fill the forms with the informations "not open, everywhere, ...". I'm passing a list of those to the template, therefore it acts as an interface between my model and my "handmade" form : class MachinePort(object): def __init__(self, machine, port): self.machine = machine self.port = port @property def fully_open(self): for rule in self.port.rule_set.filter(machine=self.machine): if ipaddr.IPv4Network("%s/%s" % (rule.ip_source, rule.ip_mask)) == ipaddr.IPv4Network("0.0.0.0/0"): return True else : return False @property def partly_open(self): return bool(self.port.rule_set.filter(machine=self.machine)) and not self.fully_open @property def not_open(self): return not self.partly_open and not self.fully_open But all this is rather ugly ! Do anyone of you know if there is a classy way to do this ? In particular with the form... I don't know how to have a form that can have an undefined number of fields, neither how to transform these fields into Rule objects (because all the rule fields would have to be gathered from the form), neither how to save multiple objects... Well I could try to hack into the Form class, but seems like too much work for such a special case. Is there any nice feature I'm missing ?

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  • How to create a custom admin configuration panel in Django?

    - by Matteo
    Hi, I would like to create a configuration panel for the homepage of the web-app I'm designing with Django. This configuration panel should let me choose some basic options like highlighting some news, setting a showcase banner, and so on. Basically I don't need an app with different rows, but just a panel page with some configuration options. The automatically generated administration area created by Django doesn't seem to handle this feature as far as I can see, so I'm asking you for some directions. Any hint is highly appreciated. Thank you in advance. Matteo

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  • How to customize pickle for django model objects

    - by muudscope
    I need to pickle a complex object that refers to django model objects. The standard pickling process stores a denormalized object in the pickle. So if the object changes on the database between pickling and unpickling, the model is now out of date. (I know this is true with in-memory objects too, but the pickling is a convenient time to address it.) So what I'd like is a way to not pickle the full django model object. Instead just store its class and id, and re-fetch the contents from the database on load. Can I specify a custom pickle method for this class? I'm happy to write a wrapper class around the django model to handle the lazy fetching from db, if there's a way to do the pickling.

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  • Beautifulsoup recursive attribute

    - by Marcos Placona
    Hi, trying to parse an XML with Beautifulsoup, but hit a brick wall when trying to use the "recursive" attribute with findall() I have a pretty odd xml format shown below: <?xml version="1.0"?> <catalog> <book id="bk101"> <author>Gambardella, Matthew</author> <title>XML Developer's Guide</title> <genre>Computer</genre> <price>44.95</price> <publish_date>2000-10-01</publish_date> <description>An in-depth look at creating applications with XML.</description> <catalog>true</catalog> </book> <book id="bk102"> <author>Ralls, Kim</author> <title>Midnight Rain</title> <genre>Fantasy</genre> <price>5.95</price> <publish_date>2000-12-16</publish_date> <description>A former architect battles corporate zombies, an evil sorceress, and her own childhood to become queen of the world.</description> <catalog>false</catalog> </book> </catalog> As you can see, the catalog tag repeats inside the book tag, which causes an error when I try to to something like: from BeautifulSoup import BeautifulStoneSoup as BSS catalog = "catalog.xml" def open_rss(): f = open(catalog, 'r') return f.read() def rss_parser(): rss_contents = open_rss() soup = BSS(rss_contents) items = soup.findAll('catalog', recursive=False) for item in items: print item.title.string rss_parser() As you will see, on my soup.findAll I've added recursive=false, which in theory would make it no recurse through the item found, but skip to the next one. This doesn't seem to work, as I always get the following error: File "catalog.py", line 17, in rss_parser print item.title.string AttributeError: 'NoneType' object has no attribute 'string' I'm sure I'm doing something stupid here, and would appreciate if someone could give me some help on how to solve this problem. Changing the HTML structure is not an option, this this code needs to perform well as it will potentially parse a large XML file. Thanks in advance, Marcos

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  • Hide deprecated methods from tab completion

    - by Morgoth
    I would like to control which methods appear when a user uses tab-completion on a custom object in ipython - in particular, I want to hide functions that I have deprecated. I still want these methods to be callable, but I don't want users to see them and start using them if they are inspecting the object. Is this something that is possible?

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  • How to make a model instance read-only after saving it once?

    - by Ryszard Szopa
    One of the functionalities in a Django project I am writing is sending a newsletter. I have a model, Newsletter and a function, send_newsletter, which I have registered to listen to Newsletter's post_save signal. When the newsletter object is saved via the admin interface, send_newsletter checks if created is True, and if yes it actually sends the mail. However, it doesn't make much sense to edit a newsletter that has already been sent, for the obvious reasons. Is there a way of making the Newsletter object read-only once it has been saved? Edit: I know I can override the save method of the object to raise an error or do nothin if the object existed. However, I don't see the point of doing that. As for the former, I don't know where to catch that error and how to communicate the user the fact that the object wasn't saved. As for the latter, giving the user false feedback (the admin interface saying that the save succeded) doesn't seem like a Good Thing. What I really want is allow the user to use the Admin interface to write the newsletter and send it, and then browse the newsletters that have already been sent. I would like the admin interface to show the data for sent newsletters in an non-editable input box, without the "Save" button. Alternatively I would like the "Save" button to be inactive.

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  • How to add legend to imshow() in matplotlib

    - by rankthefirst
    I am using matplotlib In plot() or bar(), we can easily put legend, if we add labels to them. but what if it is a contourf() or imshow() I know there is a colorbar() which can present the color range, but it is not satisfied. I want such a legend which have names(labels). For what I can think of is that, add labels to each element in the matrix, then ,try legend(), to see if it works, but how to add label to the element, like a value?? in my case, the raw data is like: 1,2,3,3,4 2,3,4,4,5 1,1,1,2,2 for example, 1 represents 'grass', 2 represents 'sand', 3 represents 'hill'... and so on. imshow() works perfectly with my case, but without the legend. my question is: Is there a function that can automatically add legend, for example, in my case, I just have to do like this: someFunction('grass','sand',...) If there isn't, how do I add labels to each value in the matrix. For example, label all the 1 in the matrix 'grass', labell all the 2 in the matrix 'sand'...and so on. Thank you!

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  • Right clicking on QHeaderView inside of QTreeView

    - by taynaron
    I've written a descendant of QTreeView with multiple columns. I want to create a popup menu that appears whe nthe user right-clicks over the column headers. I have tried catching signals from QTreeView for this, but QTreeView doesn't seem to emit signals on the headers. QTreeView.header() does. I therefore believe I must either: 1: connect one of QHeaderView's signals to a popup function - I have been unable to find a signal that is triggered on a single right click - I have tried sectionClicked, sectionHandleDoubleClicked, sectionDoubleClicked, sectionPressed (not surprised the double click functions didn't catch a single right click - but they do catch a double right click) self.header().sectionClicked.connect(self.headerMenu) self.header().sectionHandleDoubleClicked.connect(self.headerMenu) self.header().sectionDoubleClicked.connect(self.headerMenu) self.header().sectionPressed.connect(self.headerMenu) or, 2: write a descendant of QHeaderView with my own MousePressEvent function, and use that for my headers. I have so far been unsuccessful in connecting the new header class to the QTreeView descendant. I keep getting a Segmentation Fault on runtime, with no more explanation. #in DiceView's init, where DiceHeaders is the QHeaderView descendant self.setHeader(DiceHeaders()) Any ideas?

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  • Blackjack game reshuffling problem

    - by Jam
    I am trying to make a blackjack game where before each new round, the program checks to make sure that the deck has 7 cards per player. And if it doesn't, the deck clears, repopulates, and reshuffles. I have most of the problem down, but for some reason at the start of every deal it reshuffles the deck more than once, and I can't figure out why. Help, please. Here's what I have so far: (P.S. the imported cards and games modules aren't part of the problem, I'm fairly sure my problem lies in the deal() function of my BJ_Deck class.) import cards, games class BJ_Card(cards.Card): """ A Blackjack Card. """ ACE_VALUE = 1 def get_value(self): if self.is_face_up: value = BJ_Card.RANKS.index(self.rank) + 1 if value > 10: value = 10 else: value = None return value value = property(get_value) class BJ_Deck(cards.Deck): """ A Blackjack Deck. """ def populate(self): for suit in BJ_Card.SUITS: for rank in BJ_Card.RANKS: self.cards.append(BJ_Card(rank, suit)) def deal(self, hands, per_hand=1): for rounds in range(per_hand): for hand in hands: if len(self.cards)>=7*(len(hands)): top_card=self.cards[0] self.give(top_card, hand) else: print "Reshuffling the deck." self.cards=[] self.populate() self.shuffle() top_card=self.cards[0] self.give(top_card, hand) class BJ_Hand(cards.Hand): """ A Blackjack Hand. """ def init(self, name): super(BJ_Hand, self).init() self.name = name def __str__(self): rep = self.name + ":\t" + super(BJ_Hand, self).__str__() if self.total: rep += "(" + str(self.total) + ")" return rep def get_total(self): # if a card in the hand has value of None, then total is None for card in self.cards: if not card.value: return None # add up card values, treat each Ace as 1 total = 0 for card in self.cards: total += card.value # determine if hand contains an Ace contains_ace = False for card in self.cards: if card.value == BJ_Card.ACE_VALUE: contains_ace = True # if hand contains Ace and total is low enough, treat Ace as 11 if contains_ace and total <= 11: # add only 10 since we've already added 1 for the Ace total += 10 return total total = property(get_total) def is_busted(self): return self.total > 21 class BJ_Player(BJ_Hand): """ A Blackjack Player. """ def is_hitting(self): response = games.ask_yes_no("\n" + self.name + ", do you want a hit? (Y/N): ") return response == "y" def bust(self): print self.name, "busts." self.lose() def lose(self): print self.name, "loses." def win(self): print self.name, "wins." def push(self): print self.name, "pushes." class BJ_Dealer(BJ_Hand): """ A Blackjack Dealer. """ def is_hitting(self): return self.total < 17 def bust(self): print self.name, "busts." def flip_first_card(self): first_card = self.cards[0] first_card.flip() class BJ_Game(object): """ A Blackjack Game. """ def init(self, names): self.players = [] for name in names: player = BJ_Player(name) self.players.append(player) self.dealer = BJ_Dealer("Dealer") self.deck = BJ_Deck() self.deck.populate() self.deck.shuffle() def get_still_playing(self): remaining = [] for player in self.players: if not player.is_busted(): remaining.append(player) return remaining # list of players still playing (not busted) this round still_playing = property(get_still_playing) def __additional_cards(self, player): while not player.is_busted() and player.is_hitting(): self.deck.deal([player]) print player if player.is_busted(): player.bust() def play(self): # deal initial 2 cards to everyone self.deck.deal(self.players + [self.dealer], per_hand = 2) self.dealer.flip_first_card() # hide dealer's first card for player in self.players: print player print self.dealer # deal additional cards to players for player in self.players: self.__additional_cards(player) self.dealer.flip_first_card() # reveal dealer's first if not self.still_playing: # since all players have busted, just show the dealer's hand print self.dealer else: # deal additional cards to dealer print self.dealer self.__additional_cards(self.dealer) if self.dealer.is_busted(): # everyone still playing wins for player in self.still_playing: player.win() else: # compare each player still playing to dealer for player in self.still_playing: if player.total > self.dealer.total: player.win() elif player.total < self.dealer.total: player.lose() else: player.push() # remove everyone's cards for player in self.players: player.clear() self.dealer.clear() def main(): print "\t\tWelcome to Blackjack!\n" names = [] number = games.ask_number("How many players? (1 - 7): ", low = 1, high = 8) for i in range(number): name = raw_input("Enter player name: ") names.append(name) print game = BJ_Game(names) again = None while again != "n": game.play() again = games.ask_yes_no("\nDo you want to play again?: ") main() raw_input("\n\nPress the enter key to exit.")

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  • Implementing __concat__

    - by Casebash
    I tried to implement __concat__, but it didn't work >>> class lHolder(): ... def __init__(self,l): ... self.l=l ... def __concat__(self, l2): ... return self.l+l2 ... def __iter__(self): ... return self.l.__iter__() ... >>> lHolder([1])+[2] Traceback (most recent call last): File "<stdin>", line 1, in <module> TypeError: unsupported operand type(s) for +: 'lHolder' and 'list' How can I fix this?

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  • Configuring Eclipse with wxPython

    - by Alex
    Hi, I've been browsing documentation, but haven't been able to find a straightforward tutorial, so I apologize if this is a really simple question. Anyway, I have eclipse with pydev installed on MAC OSX, and I want configure wxPython to work with eclipse, how do I do this? Once I've downloaded wxpython, what steps do I take to allow wxPython development from eclipse? Thanks!

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  • strange SqlAlchemy update behaviour

    - by Max
    I'm new to SqlAlchemy and Elixir, so I've started from tutorial and tried to create table, insert a record, and then update it as follows: #'elixir_test.py' from elixir import * metadata.bind = "postgresql://myuser:mypwd@localhost:5432/dbname" metadata.bind.echo = True class Movie(Entity): title = Field(Unicode(30)) year = Field(Integer) description = Field(UnicodeText) def __repr__(self): return '<Movie "%s" (%d)>' % (self.title, self.year) and in another file in the same directory: from elixir_test import * setup_all() #create table create_all() Movie(title=u"Blade Runner", year=1982) #add record session.commit() #get records Movie.query.all() #trying to update record and commit changes, BUT... movie = Movie.query.first() movie.year = 1983 session.commit() #now we have two records in our table, one #with year=1982 and one with year=1983 Movie.query.all() What did I missed?

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  • Clear all class variables between instances

    - by ensnare
    This is probably a stupid question, but what's the best way to clear class variables between instances? I know I could reset each variable individually in the constructor; but is there a way to do this in bulk? Or am I doing something totally wrong that requires a different approach? Thanks for helping ... class User(): def __init__(self): #RESET ALL CLASS VARIABLES def commit(self): #Commit variables to database >>u = User() >>u.name = 'Jason' >>u.email = '[email protected]' >>u.commit() So that each time User is called the variables are fresh. Thanks.

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  • BioPython: extracting sequence IDs from a Blast output file

    - by Jon
    Hi, I have a BLAST output file in XML format. It is 22 query sequences with 50 hits reported from each sequence. And I want to extract all the 50x22 hits. This is the code I currently have, but it only extracts the 50 hits from the first query. from Bio.Blast import NCBIXM blast_records = NCBIXML.parse(result_handle) blast_record = blast_records.next() save_file = open("/Users/jonbra/Desktop/my_fasta_seq.fasta", 'w') for alignment in blast_record.alignments: for hsp in alignment.hsps: save_file.write('>%s\n' % (alignment.title,)) save_file.close() Somebody have any suggestions as to extract all the hits? I guess I have to use something else than alignments. Hope this was clear. Thanks! Jon

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