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  • Numpy array, how to select indices satisfying multiple conditions?

    - by Bob
    Suppose I have a numpy array x = [5, 2, 3, 1, 4, 5], y = ['f', 'o', 'o', 'b', 'a', 'r']. I want to select the elements in y corresponding to elements in x that are greater than 1 and less than 5. I tried x = array([5, 2, 3, 1, 4, 5]) y = array(['f','o','o','b','a','r']) output = y[x > 1 & x < 5] # desired output is ['o','o','b','a'] but this doesn't work. How would I do this?

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  • More than one profile in Django?

    - by JPC
    Is it possible to use Django's user authentication features with more than one profile? Currently I have a settings.py file that has this in it: AUTH_PROFILE_MODULE = 'auth.UserProfileA' and a models.py file that has this in it: from django.db import models from django.contrib.auth.models import User class UserProfileA(models.Model): company = models.CharField(max_length=30) user = models.ForeignKey(User, unique=True) that way, if a user logs in, I can easily get the profile because the User has a get_profile() method. However, I would like to add UserProfileB. From looking around a bit, it seems that the starting point is to create a superclass to use as the AUTH_PROFILE_MODULE and have both UserProfileA and UserProfileB inherit from that superclass. The problem is, I don't think the get_profile() method returns the correct profile. It would return an instance of the superclass. I come from a java background (polymorphism) so I'm not sure exactly what I should be doing. Thanks!

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  • How to discover table properties from SQLAlchemy mapped object

    - by ssaboum
    Hi, My point is i have a class mapped with a table, in my case in a declarative way, and i want to "discover" table properties, columns, names, relations, from this class : engine = create_engine('sqlite:///' + databasePath, echo=True) # setting up root class for declarative declaration Base = declarative_base(bind=engine) class Ship(Base): __tablename__ = 'ships' id = Column(Integer, primary_key=True) name = Column(String(255)) def __init__(self, name): self.name = name def __repr__(self): return "<Ship('%s')>" % (self.name) So now my goal is from the "Ship" class to get the table columns and their properties from another piece of code. I guess i can deal with it using instrumentation but is there any way provided by the SQLAlchemy API ? Thank you.

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  • How to skip interstitial in a django view if a user hits the back button?

    - by Jose Boveda
    I have an application with an interstitial page to hold the user while an intensive operation runs in the background (takes anywhere from 30 secs to 1 minute). Once the operation is done, the user is redirected to the results page. Once on the result page, typical user behavior is to hit the 'back' button to perform the operation on a different input set. However, the back button takes them to the interstitial, not the original form. The desired behavior is to go back to the original form, skipping the interstitial entirely. I'd like this to be default behavior if the user goes to the interstitial page from anywhere but the original form. I thought I could create this by using the @never_cache function decorator in my view for the interstitial, and logic based on request.META['HTTP_REFERER'], however the page doesn't respect these. The browser's back button still trumps this behavior. Any ideas on how to solve this issue?

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  • Parse large XML file w/ script or use BioPython API ?

    - by jeremy04
    Hey guys this is my first question on here. I'm trying to make a local copy of the UniprotKB in SQL. The UniprotKB is 2.1GB, and it comes in XML and a special text format used by SwissProt Here are my options: 1) Use a SAX parser (XML) - I chose Ruby, and Nokogiri. I started writing the parser, but my initial reaction: how would I map the XML schema to the SAX parser? 2) BioPython - I already have BioSQL/Biopython installed, which literally created my SQL schema for me, and I was able to successfully insert one SwissProt/Uniprot txt file into the database. I'm running it right now (crosses fingers) on the entire 2.1gb. Here is the code I'm running: from Bio import SeqIO from BioSQL import BioSeqDatabase from Bio import SwissProt server = BioSeqDatabase.open_database(driver = "MySQLdb", user = "root", passwd = "", host="localhost", db = "bioseqdb") db = server["uniprot"] iterator = SeqIO.parse(open("/path/to/uniprot_sprot.dat", "r"), "swiss") db.load(iterator) server.commit() Edit: it's now crashing because the transactions are getting locked (since the tables are Innodb) Error Number: 1205 Lock wait timeout exceeded; try restarting transaction. I'm using MySQL version: 5.1.43 Should I switch my database to Postgrelsql ?

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  • Assign variable with variable in function

    - by freakazo
    Let's say we have def Foo(Bar=0,Song=0): print(Bar) print(Song) And I want to assign any one of the two parameters in the function with the variable sing and SongVal: Sing = Song SongVal = 2 So that it can be run like: Foo(Sing=SongVal) Where Sing would assign the Song parameter to the SongVal which is 2. The result should be printed like so: 0 2 So should I rewrite my function or is it possible to do it the way I want to? (With the code above you get an error saying Foo has no parameter Sing. Which I understand why, any way to overcome this without rewriting the function too much? Thanks in advance!

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  • Twisted Spread: How to authenticate each RPC with digital signature

    - by kronat
    I have remote objects which talk each others with RPCs, using Twisted Spread. I want that objects authenticate messages, before using them, with digital signatures, but I don't know where to start to implement this. In my head, the Root object must have a public/private key pair, and the Client too. When a message is sent, a digital signature of the hash is added, and when it is received, the signature is checked. Is the Protocol part where I need to add these adds and checks? Thank you

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  • Alternative pygame resources

    - by Devo
    Hi, I have been trying to access the pygame website for a few weeks now, and I can't get to it. I doubt it's down, so I have to conclude that it's blocked because I am in China. I have no idea why. Anyways, I want the pygame documentation, but all the download links I fond lead back to pygame.org (which I does not even begin loading, it's such a politically subversive website you know!). Can anyone tell me where I can get documentation and other pygame resources without going through pygame.org? I would really appreciate it, thanks. PS I am on windows XP, if it matters.

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  • changing order of items in tkinter listbox

    - by user1104854
    Is there an easier way to change the order of items in a tkinter listbox than deleting the values for specific key, then re-entering new info? For example, I want to be able to re-arrange items in a listbox. If I want to swap the position of two, this is what I've done. It works, but I just want to see if there's a quicker way to do this. def moveup(self,selection): value1 = int(selection[0]) - 1 #value to be moved down one position value2 = selection #value to be moved up one position nameAbove = self.fileListSorted.get(value1) #name to be moved down nameBelow = self.fileListSorted.get(value2) #name to be moved up self.fileListSorted.delete(value1,value1) self.fileListSorted.insert(value1,nameBelow) self.fileListSorted.delete(value2,value2) self.fileListSorted.insert(value2,nameAbove)

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  • Dynamically create class attributes

    - by ahojnnes
    Hi, I need to dynamically create class attributes from a DEFAULTS dictionary. defaults = { 'default_value1':True, 'default_value2':True, 'default_value3':True, } class Settings(object): default_value1 = some_complex_init_function(defaults[default_value1], ...) default_value2 = some_complex_init_function(defaults[default_value2], ...) default_value3 = some_complex_init_function(defaults[default_value3], ...) I could also achive this by having sth. like __init__ for class creation, in order to dynamically create these attributes from dictionary and save a lot of code and stupid work. How would you do this? Thank you very much in advance!

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  • How to get these values with BeautifulSoup?

    - by Damiano
    Hello everybody, I have this html table: <table> <tr> <td class="datax">a</td> <td class="datax">b</td> <td class="datax">c</td> <td class="datax">d</td> </tr> <tr> <td class="datax">e</td> <td class="datax">f</td> <td class="datax">g</td> <td class="datax">h</td> </tr> </table> How to get the second and the fourth value of each <tr> ? If i do: bs.findAll('td', {'class':'datax'}) I get: <td class="datax">a</td> <td class="datax">b</td> <td class="datax">c</td> <td class="datax">d</td> <td class="datax">e</td> <td class="datax">f</td> <td class="datax">g</td> <td class="datax">h</td> it's correct! but I would like to have this result: <td class="datax">b</td> <td class="datax">d</td> <td class="datax">f</td> <td class="datax">h</td> so, the values I want are - b - d - f - h (the second and the forth <td> of each <tr>) Is it possible with BeautifulSoup module? Thank you very much!

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  • how to create multiple selections in text edit box in qt4?

    - by Ronny
    Qt3.3 used to allow for multiple selections in the QTextEdit widget by calling the setSelection() function and specifying a different selection id (selNum) as the last argument in that function. In Qt4, to create a selection, I do it by creating a QTextCursor object and call the setPosition() or movePosition() methods. I have no problems being able to create a single selection of text. I am, however, unable to find a way to create multiple selections. The methods in Qt4 do not have an argument which allows you to set a selection id, nor can i find any other function in the QTextCursor or QTextEdit which looks like it might allow me to do so. Has this feature been completely removed from Qt4? or has is there a new and different way of doing it? Thanks. Ronny

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  • Threaded Django task doesn't automatically handle transactions or db connections?

    - by Gabriel Hurley
    I've got Django set up to run some recurring tasks in their own threads, and I noticed that they were always leaving behind unfinished database connection processes (pgsql "Idle In Transaction"). I looked through the Postgres logs and found that the transactions weren't being completed (no ROLLBACK). I tried using the various transaction decorators on my functions, no luck. I switched to manual transaction management and did the rollback manually, that worked, but still left the processes as "Idle". So then I called connection.close(), and all is well. But I'm left wondering, why doesn't Django's typical transaction and connection management work for these threaded tasks that are being spawned from the main Django thread?

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  • SQLAlchemy Mapping problem

    - by asdvalkn
    Dear Everyone, I am trying to sqlalchemy to correctly map my data. Note that a unified group is basically a group of groups. (One unifiedGroup maps to many groups but each group can only map to one ug). So basically this is the definition of my unifiedGroups: CREATE TABLE `unifiedGroups` ( `ugID` INT AUTO_INCREMENT, `gID` INT NOT NULL, PRIMARY KEY(`ugID`, `gID`), KEY( `gID`) ) ENGINE=MyISAM DEFAULT CHARSET=utf8 ; Note that each row is a ugID, gID tuple. ( I do not know before hand how many gID is per ugID so this is probably the most sensible and simplest method). Definition for my UnifiedGroup class class UnifiedGroup(object): """UnifiedProduct behaves very much like a group """ def __init__(self, ugID): self.ugID=ugID #Added by mapping self.groups=False def __str__(self): return '<%s:%s>' % (self.ugID, ','.join( [g for g in self.groups])) These are my mapping tables: tb_groupsInfo = Table( 'groupsInfo', metadata, Column('gID', Integer, primary_key=True), Column('gName', String(128)), ) tb_unifiedGroups = Table( 'unifiedGroups', metadata, Column('ugID', Integer, primary_key=True), Column('gID', Integer, ForeignKey('groupsInfo.gID')), ) My mapper maps in the following manner: mapper( UnifiedGroup, tb_unifiedGroups, properties={ 'groups': relation( Group, backref='unifiedGroup') }) However, when I tried to do groupInstance.unifiedGroup, I am getting an empty list [], while groupInstance.unifiedGroup.groups returns me an error: AttributeError: 'InstrumentedList' object has no attribute 'groups' Traceback (most recent call last): File "Mapping.py", line 119, in <module> print p.group.unifiedGroup.groups AttributeError: 'InstrumentedList' object has no attribute 'groups' What is wrong?

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  • Django: Extending User Model - Inline User fields in UserProfile

    - by Jack Sparrow
    Is there a way to display User fields under a form that adds/edits a UserProfile model? I am extending default Django User model like this: class UserProfile(models.Model): user = models.OneToOneField(User, unique=True) about = models.TextField(blank=True) I know that it is possible to make a: class UserProfileInlineAdmin(admin.TabularInline): and then inline this in User ModelAdmin but I want to achieve the opposite effect, something like inverse inlining, displaying the fields of the model pointed by the OneToOne Relationship (User) in the page of the model defining the relationship (UserProfile). I don't care if it would be in the admin or in a custom view/template. I just need to know how to achieve this. I've been struggling with ModelForms and Formsets, I know the answer is somewhere there, but my little experience in Django doesn't allow me to come up with the solution yet. A little example would be really helpful!

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  • How do I make BeautifulSoup parse the contents of textarea tags as HTML?

    - by brofield
    Before 3.0.5, BeautifulSoup used to treat the contents of <textarea as HTML. It now treats it as text. The document I am parsing has HTML inside the textarea tags, and I am trying to process it. I've tried: for textarea in soup.findAll('textarea'): contents = BeautifulSoup.BeautifulSoup(textarea.contents) textarea.replaceWith(contents.html(text=True)) But I'm getting errors. I can't find this in the documentation, and the alternative parsers aren't helping. Anyone know how I can parse the textareas as HTML?

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  • Django-admin.py not being recognized suddenly

    - by Jen Camara
    I tried starting a new Django project yesterday but when I did "django-admin.py startproject projectname" I got an error stating: "django-admin.py is not recognized as an internal or external command." The strange thing is, when I first installed Django, I made a few projects and everything worked fine. But now after going back a few months later it has suddenly stopped working. I've tried looking around for an answer and all I could find is that this typically has to do with the system path settings, however, I know that I have the proper paths set up so I don't understand what's happening. Does anybody have any idea what's going on?

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  • Empty dict-like collection problem in SQLAlchemy

    - by maksymko
    I have a mapping in SQLAlchemy that looks like this: t_property_value = sa.Table('property_value', MetaData, autoload = True, autoload_with = engine) orm.mapper(PropertyValue, t_property_value) t_estate = sa.Table('estate', MetaData, autoload = True, autoload_with = engine) orm.mapper(Estate, t_estate, properties = dict( property_hash = orm.relation(PropertyValue, collection_class = column_mapped_collection(t_property_value.c.property_id)) )) Now, everything seems to be fine, when I load the Estate object and it has some relations to PropertyValue objects. However, when it does not, then property_hash attribute is None, instead of being something dict-like, so I can not add new relations like this: estate.property_hash[prop_id] = PropertyValue(...) because I get the "'NoneType' object does not support item assignment" error. So, is there any way to force SQLAlchemy to create proper empty collection?

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  • Django, url tag in template doesn't work: NoReverseMatch

    - by Lukasz Jocz
    I've encountered a problem with generating reverse url in templates in django. I'm trying to solve it since a few hours and I have no idea what the problem might be. URL reversing works great in models and views: # like this in models.py @models.permalink def get_absolute_url(self): return ('entry', (), { 'entry_id': self.entry.id, }) # or this in views.py return HttpResponseRedirect(reverse('entry',args=(entry_id,))) but when I'm trying to make it in template I get such an error: NoReverseMatch at /entry/1/ Reverse for ''add_comment'' with arguments '(1L,)' and keyword arguments '{}' not found. My file structure looks like this: project/ +-- frontend ¦   +-- models.py ¦   +-- urls.py ¦   +-- views.py +-- settings.py +-- templates ¦   +-- add_comment.html ¦   +-- entry.html +-- utils ¦   +-- with_template.py +-- wsgi.py My urls.py: from project.frontend.views import * from django.conf.urls import patterns, include, url urlpatterns = patterns('project.frontend.views', url(r'^entry/(?P<entry_id>\d+)/', 'entry', name="entry"), (r'^entry_list/', 'entry_list'), Then entry_list.html: {% extends "base.html" %} {% block content %} {% for entry in entries %} {% url 'entry' entry.id %} {% endfor %} {% endblock %} In views.py I have: @with_template def entry(request, entry_id): entry = Entry.objects.get(id=entry_id) entry.comments = entry.get_comments() return locals() where with_template is following decorator(but I don't think this is a case): class TheWrapper(object): def __init__(self, default_template_name): self.default_template_name = default_template_name def __call__(self, func): def decorated_func(request, *args, **kwargs): extra_context = kwargs.pop('extra_context', {}) dictionary = {} ret = func(request, *args, **kwargs) if isinstance(ret, HttpResponse): return ret dictionary.update(ret) dictionary.update(extra_context) return render_to_response(dictionary.get('template_name', self.default_template_name), context_instance=RequestContext(request), dictionary=dictionary) update_wrapper(decorated_func, func) return decorated_func if not callable(arg): return TheWrapper(arg) else: default_template_name = ''.join([ arg.__name__, '.html']) return TheWrapper(default_template_name)(arg) Do you have any idea, what may cause the problem? Great thanks in advance!

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  • Elegant Disjunctive Normal Form in Django

    - by Mike
    Let's say I've defined this model: class Identifier(models.Model): user = models.ForeignKey(User) key = models.CharField(max_length=64) value = models.CharField(max_length=255) Each user will have multiple identifiers, each with a key and a value. I am 100% sure I want to keep the design like this, there are external reasons why I'm doing it that I won't go through here, so I'm not interested in changing this. I'd like to develop a function of this sort: def get_users_by_identifiers(**kwargs): # something goes here return users The function will return all users that have one of the key=value pairs specified in **kwargs. Here's an example usage: get_users_by_identifiers(a=1, b=2) This should return all users for whom a=1 or b=2. I've noticed that the way I've set this up, this amounts to a disjunctive normal form...the SQL query would be something like: SELECT DISTINCT(user_id) FROM app_identifier WHERE (key = "a" AND value = "1") OR (key = "b" AND value = "2") ... I feel like there's got to be some elegant way to take the **kwargs input and do a Django filter on it, in just 1-2 lines, to produce this result. I'm new to Django though, so I'm just not sure how to do it. Here's my function now, and I'm completely sure it's not the best way to do it :) def get_users_by_identifiers(**identifiers): users = [] for key, value in identifiers.items(): for identifier in Identifier.objects.filter(key=key, value=value): if not identifier.user in users: users.append(identifier.user) return users Any ideas? :) Thanks!

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