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• MacBook Pro Late 2009 SATA Resets, Slowness (Is my motherboard dying on both machines?)

  - by A Student at a University

  My MacBook Pro runs slower the longer it's on. I am getting kernel warnings. Some, but not all, resets correlate with AC power connects and disconnects. I don't think the warnings do. (How do I tell?) What are these errors? What causes them? Can this damage the drive or corrupt data? What is it seeing that motivates these? 02:37:16[ 0.791992] ahci 0000:00:0b.0: PCI INT A -> Link[LSI0] -> GSI 20 (level, low) -> IRQ 20 02:37:16[ 0.792047] ahci 0000:00:0b.0: irq 43 for MSI/MSI-X 02:37:16[ 0.792053] ahci 0000:00:0b.0: controller can't do PMP, turning off CAP_PMP 02:37:16[ 0.792104] ahci 0000:00:0b.0: AHCI 0001.0200 32 slots 6 ports 1.5 Gbps 0x3 impl IDE mode 02:37:16[ 0.792107] ahci 0000:00:0b.0: flags: 64bit ncq sntf pm led pio slum part boh 02:37:16[ 0.792111] ahci 0000:00:0b.0: setting latency timer to 64 02:37:16[ 0.813473] scsi0 : ahci 02:37:16[ 0.823340] scsi1 : ahci 02:37:16[ 0.848164] ata1: SATA max UDMA/133 abar m8192@0xe7484000 port 0xe7484100 irq 43 02:37:16[ 0.848166] ata2: SATA max UDMA/133 abar m8192@0xe7484000 port 0xe7484180 irq 43 02:37:16[ 1.190132] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 300) 02:37:16[ 1.190153] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 300) 02:37:16[ 1.213568] ata1.00: ATA-8: OCZ-VERTEX2, 1.23, max UDMA/133 02:37:16[ 1.213572] ata1.00: 195371568 sectors, multi 1: LBA48 NCQ (depth 31/32) 02:37:16[ 1.227293] ata2.00: ATA-8: ST9500420ASG, 0002SDM1, max UDMA/133 02:37:16[ 1.227297] ata2.00: 976773168 sectors, multi 16: LBA48 NCQ (depth 31/32) 02:37:16[ 1.229570] ata2.00: configured for UDMA/133 02:37:16[ 1.240120] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5850000 action 0xe frozen 02:37:16[ 1.240123] ata2: irq_stat 0x00000040, connection status changed 02:37:16[ 1.240127] ata2: SError: { PHYRdyChg CommWake LinkSeq TrStaTrns DevExch } 02:37:16[ 1.240133] ata2: hard resetting link 02:37:16[ 1.260738] ata1.00: configured for UDMA/133 02:37:16[ 1.280111] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5850000 action 0xe frozen 02:37:16[ 1.280114] ata1: irq_stat 0x00000040, connection status changed 02:37:16[ 1.280118] ata1: SError: { PHYRdyChg CommWake LinkSeq TrStaTrns DevExch } 02:37:16[ 1.280122] ata1: hard resetting link 02:37:16[ 1.990101] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 300) 02:37:16[ 1.994215] ata2.00: configured for UDMA/133 02:37:16[ 1.994220] ata2: EH complete 02:37:16[ 2.030097] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 300) 02:37:16[ 2.090773] ata1.00: configured for UDMA/133 02:37:16[ 2.090778] ata1: EH complete 02:37:16[ 2.090931] scsi 0:0:0:0: Direct-Access ATA OCZ-VERTEX2 1.23 PQ: 0 ANSI: 5 02:37:16[ 2.091045] sd 0:0:0:0: Attached scsi generic sg0 type 0 02:37:16[ 2.091121] sd 0:0:0:0: [sda] 195371568 512-byte logical blocks: (100 GB/93.1 GiB) 02:37:16[ 2.091159] scsi 1:0:0:0: Direct-Access ATA ST9500420ASG 0002 PQ: 0 ANSI: 5 02:37:16[ 2.091163] sd 0:0:0:0: [sda] Write Protect is off 02:37:16[ 2.091165] sd 0:0:0:0: [sda] Mode Sense: 00 3a 00 00 02:37:16[ 2.091183] sd 0:0:0:0: [sda] Write cache: enabled, read cache: enabled, doesn't support DPO or FUA 02:37:16[ 2.091252] sd 1:0:0:0: Attached scsi generic sg1 type 0 02:37:16[ 2.091446] sd 1:0:0:0: [sdb] 976773168 512-byte logical blocks: (500 GB/465 GiB) 02:37:16[ 2.091580] sd 1:0:0:0: [sdb] Write Protect is off 02:37:16[ 2.091582] sd 1:0:0:0: [sdb] Mode Sense: 00 3a 00 00 02:37:16[ 2.091637] sd 1:0:0:0: [sdb] Write cache: enabled, read cache: enabled, doesn't support DPO or FUA 02:37:16[ 2.093140] sd 0:0:0:0: [sda] Attached SCSI disk 02:37:16[ 2.093773] sd 1:0:0:0: [sdb] Attached SCSI disk 02:37:16[ 2.693899] EXT4-fs (dm-0): mounted filesystem with ordered data mode. Opts: (null) 02:37:16[ 5.483492] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro 02:37:16[ 7.905040] EXT4-fs (dm-2): mounted filesystem with ordered data mode. Opts: (null) 02:37:25[ 19.553095] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=600 02:37:25[ 19.555266] EXT4-fs (dm-2): re-mounted. Opts: commit=600 02:37:25[ 19.641532] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5950000 action 0xe frozen t4 02:37:25[ 19.641532] ata1: irq_stat 0x00000040, connection status changed 02:37:25[ 19.641532] ata1: SError: { PHYRdyChg CommWake Dispar LinkSeq TrStaTrns DevExch } 02:37:25[ 19.641533] ata1: hard resetting link 02:37:25[ 19.642076] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5950000 action 0xe frozen t4 02:37:25[ 19.642078] ata2: irq_stat 0x00000040, connection status changed 02:37:25[ 19.642081] ata2: SError: { PHYRdyChg CommWake Dispar LinkSeq TrStaTrns DevExch } 02:37:25[ 19.642084] ata2: hard resetting link 02:37:26[ 20.392606] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 300) 02:37:26[ 20.392610] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 300) 02:37:26[ 20.396697] ata2.00: configured for UDMA/133 02:37:26[ 20.396703] ata2: EH complete 02:37:26[ 20.451491] ata1.00: configured for UDMA/133 02:37:26[ 20.451498] ata1: EH complete 02:37:30[ 24.563725] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=600 02:37:30[ 24.565939] EXT4-fs (dm-2): re-mounted. Opts: commit=600 02:37:30[ 24.627236] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5900000 action 0xe frozen t4 02:37:30[ 24.627240] ata1: irq_stat 0x00000040, connection status changed 02:37:30[ 24.627242] ata1: SError: { Dispar LinkSeq TrStaTrns DevExch } 02:37:30[ 24.627246] ata1: hard resetting link 02:37:30[ 24.632241] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5950000 action 0xe frozen t4 02:37:30[ 24.632244] ata2: irq_stat 0x00000040, connection status changed 02:37:30[ 24.632247] ata2: SError: { PHYRdyChg CommWake Dispar LinkSeq TrStaTrns DevExch } 02:37:30[ 24.632250] ata2: hard resetting link 02:37:31[ 25.372582] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 300) 02:37:31[ 25.382615] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 300) 02:37:31[ 25.386782] ata2.00: configured for UDMA/133 02:37:31[ 25.386788] ata2: EH complete 02:37:31[ 25.431668] ata1.00: configured for UDMA/133 02:37:31[ 25.431674] ata1: EH complete 02:45:54[ 529.141844] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=0 02:45:55[ 529.544529] EXT4-fs (dm-2): re-mounted. Opts: commit=0 02:45:55[ 529.622561] ata1: limiting SATA link speed to 1.5 Gbps 02:45:55[ 529.622568] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5850000 action 0xe frozen 02:45:55[ 529.622572] ata1: irq_stat 0x00400040, connection status changed 02:45:55[ 529.622576] ata1: SError: { PHYRdyChg CommWake LinkSeq TrStaTrns DevExch } 02:45:55[ 529.622583] ata1: hard resetting link 02:45:55[ 529.622609] ata2: limiting SATA link speed to 1.5 Gbps 02:45:55[ 529.622613] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5950000 action 0xe frozen 02:45:55[ 529.622616] ata2: irq_stat 0x00000040, connection status changed 02:45:55[ 529.622620] ata2: SError: { PHYRdyChg CommWake Dispar LinkSeq TrStaTrns DevExch } 02:45:55[ 529.622624] ata2: hard resetting link 02:45:56[ 530.380135] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:45:56[ 530.380157] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:45:56[ 530.384305] ata2.00: configured for UDMA/133 02:45:56[ 530.384314] ata2: EH complete 02:45:56[ 530.399225] ata1.00: configured for UDMA/133 02:45:56[ 530.399233] ata1: EH complete 02:45:58[ 532.395990] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=600 02:45:58[ 532.518270] EXT4-fs (dm-2): re-mounted. Opts: commit=600 02:45:58[ 532.590968] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5840000 action 0xe frozen t4 02:45:58[ 532.590973] ata1: irq_stat 0x00000040, connection status changed 02:45:58[ 532.590977] ata1: SError: { CommWake LinkSeq TrStaTrns DevExch } 02:45:58[ 532.590983] ata1: hard resetting link 02:45:58[ 532.591034] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5950000 action 0xe frozen t4 02:45:58[ 532.591037] ata2: irq_stat 0x00000040, connection status changed 02:45:58[ 532.591041] ata2: SError: { PHYRdyChg CommWake Dispar LinkSeq TrStaTrns DevExch } 02:45:58[ 532.591045] ata2: hard resetting link 02:45:59[ 533.340147] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:45:59[ 533.340168] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:45:59[ 533.344416] ata2.00: configured for UDMA/133 02:45:59[ 533.344424] ata2: EH complete 02:45:59[ 533.360839] ata1.00: configured for UDMA/133 02:45:59[ 533.360847] ata1: EH complete 02:45:59[ 533.584449] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=0 02:45:59[ 533.586999] EXT4-fs (dm-2): re-mounted. Opts: commit=0 02:45:59[ 533.660117] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5950000 action 0xe frozen 02:45:59[ 533.660122] ata2: irq_stat 0x00000040, connection status changed 02:45:59[ 533.660126] ata2: SError: { PHYRdyChg CommWake Dispar LinkSeq TrStaTrns DevExch } 02:45:59[ 533.660132] ata2: hard resetting link 02:45:59[ 533.660141] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5850000 action 0xe frozen 02:45:59[ 533.660143] ata1: irq_stat 0x00000040, connection status changed 02:45:59[ 533.660147] ata1: SError: { PHYRdyChg CommWake LinkSeq TrStaTrns DevExch } 02:45:59[ 533.660151] ata1: hard resetting link 02:46:00[ 534.412536] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:00[ 534.412562] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:00[ 534.416768] ata2.00: configured for UDMA/133 02:46:00[ 534.416777] ata2: EH complete 02:46:00[ 534.431396] ata1.00: configured for UDMA/133 02:46:00[ 534.431401] ata1: EH complete 02:46:03[ 537.384649] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=600 02:46:03[ 537.504214] EXT4-fs (dm-2): re-mounted. Opts: commit=600 02:46:03[ 537.585992] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5900000 action 0xe frozen t4 02:46:03[ 537.585996] ata1: irq_stat 0x00000040, connection status changed 02:46:03[ 537.585999] ata1: SError: { Dispar LinkSeq TrStaTrns DevExch } 02:46:03[ 537.586002] ata1: hard resetting link 02:46:03[ 537.586028] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5950000 action 0xe frozen t4 02:46:03[ 537.586030] ata2: irq_stat 0x00000040, connection status changed 02:46:03[ 537.586033] ata2: SError: { PHYRdyChg CommWake Dispar LinkSeq TrStaTrns DevExch } 02:46:03[ 537.586036] ata2: hard resetting link 02:46:04[ 538.330147] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:04[ 538.330168] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:04[ 538.334389] ata2.00: configured for UDMA/133 02:46:04[ 538.334398] ata2: EH complete 02:46:04[ 538.343511] ata1.00: configured for UDMA/133 02:46:04[ 538.343519] ata1: EH complete 02:46:04[ 538.456413] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=0 02:46:04[ 538.459404] EXT4-fs (dm-2): re-mounted. Opts: commit=0 02:46:04[ 538.540138] ata1.00: limiting speed to UDMA/100:PIO4 02:46:04[ 538.540144] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5850000 action 0xe frozen 02:46:04[ 538.540148] ata1: irq_stat 0x00000040, connection status changed 02:46:04[ 538.540153] ata1: SError: { PHYRdyChg CommWake LinkSeq TrStaTrns DevExch } 02:46:04[ 538.540159] ata1: hard resetting link 02:46:04[ 538.540202] ata2.00: limiting speed to UDMA/100:PIO4 02:46:04[ 538.540207] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5950000 action 0xe frozen 02:46:04[ 538.540211] ata2: irq_stat 0x00000040, connection status changed 02:46:04[ 538.540215] ata2: SError: { PHYRdyChg CommWake Dispar LinkSeq TrStaTrns DevExch } 02:46:04[ 538.540220] ata2: hard resetting link 02:46:05[ 539.290054] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:05[ 539.290041] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:05[ 539.294100] ata2.00: configured for UDMA/100 02:46:05[ 539.294106] ata2: EH complete 02:46:05[ 539.314125] ata1.00: configured for UDMA/100 02:46:05[ 539.314132] ------------[ cut here ]------------ 02:46:05[ 539.314140] WARNING: at /build/buildd/linux-2.6.35/drivers/ata/libata-eh.c:3638 ata_eh_finish+0xdf/0xf0() 02:46:05[ 539.314144] Hardware name: MacBookPro5,3 02:46:05[ 539.314146] Modules linked in: michael_mic arc4 xt_multiport binfmt_misc rfcomm sco bnep l2cap parport_pc ppdev nvidia(P) ipt_REJECT xt_recent snd_hda_codec_cirrus xt_limit xt_tcpudp ipt_addrtype xt_state snd_hda_intel snd_hda_codec snd_hwdep snd_pcm snd_seq_midi applesmc led_class ip6table_filter lib80211_crypt_tkip snd_rawmidi snd_seq_midi_event ip6_tables input_polldev hid_apple snd_seq wl(P) snd_timer snd_seq_device snd joydev bcm5974 usbhid mbp_nvidia_bl uvcvideo btusb videodev v4l1_compat v4l2_compat_ioctl32 nf_nat_irc hid nf_conntrack_irc soundcore snd_page_alloc i2c_nforce2 coretemp lib80211 bluetooth nf_nat_ftp nf_nat nf_conntrack_ipv4 nf_defrag_ipv4 nf_conntrack_ftp nf_conntrack lp parport iptable_filter ip_tables x_tables usb_storage firewire_ohci firewire_core forcedeth crc_itu_t ahci libahci 02:46:05[ 539.314221] Pid: 202, comm: scsi_eh_0 Tainted: P 2.6.35-25-generic #44-Ubuntu 02:46:05[ 539.314224] Call Trace: 02:46:05[ 539.314233] [<ffffffff8106091f>] warn_slowpath_common+0x7f/0xc0 02:46:05[ 539.314237] [<ffffffff8106097a>] warn_slowpath_null+0x1a/0x20 02:46:05[ 539.314242] [<ffffffff813dc77f>] ata_eh_finish+0xdf/0xf0 02:46:05[ 539.314246] [<ffffffff813e441e>] sata_pmp_error_handler+0x2e/0x40 02:46:05[ 539.314256] [<ffffffffa00021bf>] ahci_error_handler+0x1f/0x90 [libahci] 02:46:05[ 539.314261] [<ffffffff813dd6d2>] ata_scsi_error+0x492/0x5e0 02:46:05[ 539.314266] [<ffffffff813b24cd>] scsi_error_handler+0x10d/0x190 02:46:05[ 539.314270] [<ffffffff813b23c0>] ? scsi_error_handler+0x0/0x190 02:46:05[ 539.314275] [<ffffffff8107f266>] kthread+0x96/0xa0 02:46:05[ 539.314280] [<ffffffff8100aee4>] kernel_thread_helper+0x4/0x10 02:46:05[ 539.314284] [<ffffffff8107f1d0>] ? kthread+0x0/0xa0 02:46:05[ 539.314288] [<ffffffff8100aee0>] ? kernel_thread_helper+0x0/0x10 02:46:05[ 539.314291] ---[ end trace 76dbffc2d5d49d9b ]--- 02:46:05[ 539.314296] ata1: EH complete 02:46:12[ 547.040091] ata1.00: exception Emask 0x0 SAct 0x0 SErr 0x0 action 0x6 frozen 02:46:12[ 547.040098] ata1.00: failed command: IDENTIFY DEVICE 02:46:12[ 547.040106] ata1.00: cmd ec/00:00:00:00:00/00:00:00:00:00/40 tag 0 pio 512 in 02:46:12[ 547.040108] res 40/00:01:00:00:00/00:00:00:00:00/e0 Emask 0x4 (timeout) 02:46:12[ 547.040111] ata1.00: status: { DRDY } 02:46:12[ 547.040117] ata1: hard resetting link 02:46:13[ 547.390144] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:13[ 547.408430] ata1.00: configured for UDMA/100 02:46:13[ 547.408438] ------------[ cut here ]------------ 02:46:13[ 547.408447] WARNING: at /build/buildd/linux-2.6.35/drivers/ata/libata-eh.c:3638 ata_eh_finish+0xdf/0xf0() 02:46:13[ 547.408451] Hardware name: MacBookPro5,3 02:46:13[ 547.408453] Modules linked in: michael_mic arc4 xt_multiport binfmt_misc rfcomm sco bnep l2cap parport_pc ppdev nvidia(P) ipt_REJECT xt_recent snd_hda_codec_cirrus xt_limit xt_tcpudp ipt_addrtype xt_state snd_hda_intel snd_hda_codec snd_hwdep snd_pcm snd_seq_midi applesmc led_class ip6table_filter lib80211_crypt_tkip snd_rawmidi snd_seq_midi_event ip6_tables input_polldev hid_apple snd_seq wl(P) snd_timer snd_seq_device snd joydev bcm5974 usbhid mbp_nvidia_bl uvcvideo btusb videodev v4l1_compat v4l2_compat_ioctl32 nf_nat_irc hid nf_conntrack_irc soundcore snd_page_alloc i2c_nforce2 coretemp lib80211 bluetooth nf_nat_ftp nf_nat nf_conntrack_ipv4 nf_defrag_ipv4 nf_conntrack_ftp nf_conntrack lp parport iptable_filter ip_tables x_tables usb_storage firewire_ohci firewire_core forcedeth crc_itu_t ahci libahci 02:46:13[ 547.408528] Pid: 202, comm: scsi_eh_0 Tainted: P W 2.6.35-25-generic #44-Ubuntu 02:46:13[ 547.408531] Call Trace: 02:46:13[ 547.408540] [<ffffffff8106091f>] warn_slowpath_common+0x7f/0xc0 02:46:13[ 547.408544] [<ffffffff8106097a>] warn_slowpath_null+0x1a/0x20 02:46:13[ 547.408549] [<ffffffff813dc77f>] ata_eh_finish+0xdf/0xf0 02:46:13[ 547.408553] [<ffffffff813e441e>] sata_pmp_error_handler+0x2e/0x40 02:46:13[ 547.408563] [<ffffffffa00021bf>] ahci_error_handler+0x1f/0x90 [libahci] 02:46:13[ 547.408567] [<ffffffff813dd6d2>] ata_scsi_error+0x492/0x5e0 02:46:13[ 547.408572] [<ffffffff813b24cd>] scsi_error_handler+0x10d/0x190 02:46:13[ 547.408577] [<ffffffff813b23c0>] ? scsi_error_handler+0x0/0x190 02:46:13[ 547.408582] [<ffffffff8107f266>] kthread+0x96/0xa0 02:46:13[ 547.408587] [<ffffffff8100aee4>] kernel_thread_helper+0x4/0x10 02:46:13[ 547.408591] [<ffffffff8107f1d0>] ? kthread+0x0/0xa0 02:46:13[ 547.408595] [<ffffffff8100aee0>] ? kernel_thread_helper+0x0/0x10 02:46:13[ 547.408598] ---[ end trace 76dbffc2d5d49d9c ]--- 02:46:13[ 547.408620] ata1: EH complete 02:46:13[ 547.562470] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=600 02:46:13[ 547.671380] EXT4-fs (dm-2): re-mounted. Opts: commit=600 02:46:13[ 547.738198] ata1.00: limiting speed to UDMA/33:PIO4 02:46:13[ 547.738204] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5800000 action 0xe frozen t4 02:46:13[ 547.738208] ata1: irq_stat 0x00000040, connection status changed 02:46:13[ 547.738212] ata1: SError: { LinkSeq TrStaTrns DevExch } 02:46:13[ 547.738218] ata1: hard resetting link 02:46:13[ 547.738262] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5900000 action 0xe frozen t4 02:46:13[ 547.738265] ata2: irq_stat 0x00000040, connection status changed 02:46:13[ 547.738269] ata2: SError: { Dispar LinkSeq TrStaTrns DevExch } 02:46:13[ 547.738274] ata2: hard resetting link 02:46:14[ 548.482561] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:14[ 548.484083] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:14[ 548.486809] ata2.00: configured for UDMA/100 02:46:14[ 548.486818] ata2: EH complete 02:46:14[ 548.498998] ata1.00: configured for UDMA/33 02:46:14[ 548.499004] ata1: EH complete 02:46:18[ 552.410499] EXT4-fs (dm-0): re-mounted. Opts: errors=remount-ro,commit=600 02:46:18[ 552.522521] EXT4-fs (dm-2): re-mounted. Opts: commit=600 02:46:18[ 552.529674] ata1: exception Emask 0x10 SAct 0x0 SErr 0x5800000 action 0xe frozen t4 02:46:18[ 552.529678] ata1: irq_stat 0x00000040, connection status changed 02:46:18[ 552.529680] ata1: SError: { LinkSeq TrStaTrns DevExch } 02:46:18[ 552.529684] ata1: hard resetting link 02:46:18[ 552.529716] ata2: exception Emask 0x10 SAct 0x0 SErr 0x5800000 action 0xe frozen t4 02:46:18[ 552.529718] ata2: irq_stat 0x00000040, connection status changed 02:46:18[ 552.529720] ata2: SError: { LinkSeq TrStaTrns DevExch } 02:46:18[ 552.529723] ata2: hard resetting link 02:46:19[ 553.280059] ata1: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:19[ 553.280068] ata2: SATA link up 1.5 Gbps (SStatus 113 SControl 310) 02:46:19[ 553.284141] ata2.00: configured for UDMA/100 02:46:19[ 553.284150] ata2: EH complete 02:46:19[ 553.301629] ata1.00: configured for UDMA/33 02:46:19[ 553.301637] ata1: EH complete

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• Completion block not being called. How to check validity?

  - by HCHogan

  I have this method which takes a block, but that block isn't always called. See the method: - (void)updateWithCompletion:(void (^)(void))completion { [MYObject myMethodWithCompletion:^(NSArray *array, NSError *error) { if (error) { NSLog(@"%s, ERROR not nil", __FUNCTION__); completion(); return; } NSLog(@"%s, calling completion %d", __FUNCTION__, &completion); completion(); NSLog(@"%s, finished completion", __FUNCTION__); }]; } I have some more NSLogs inside completion. Sometimes this program counter just blows right past the call to completion() in the code above. I don't see why this would be as the calling code always passes a literal block of code as input. If you're curious of the output of the line containing the addressof operator, it's always something different, but never 0 or nil. What would cause completion not to be executed?

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• Subprocess fails to catch the standard output

  - by user343934

  I am trying to generate tree with fasta file input and Alignment with MuscleCommandline import sys,os, subprocess from Bio import AlignIO from Bio.Align.Applications import MuscleCommandline cline = MuscleCommandline(input="c:\Python26\opuntia.fasta") child= subprocess.Popen(str(cline), stdout = subprocess.PIPE, stderr=subprocess.PIPE, shell=(sys.platform!="win32")) align=AlignIO.read(child.stdout,"fasta") outfile=open('c:\Python26\opuntia.phy','w') AlignIO.write([align],outfile,'phylip') outfile.close() I always encounter with these problems Traceback (most recent call last): File "<string>", line 244, in run_nodebug File "C:\Python26\muscleIO.py", line 11, in <module> align=AlignIO.read(child.stdout,"fasta") File "C:\Python26\Lib\site-packages\Bio\AlignIO\__init__.py", line 423, in read raise ValueError("No records found in handle") ValueError: No records found in handle

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• DataContext Refresh and PropertyChanging & PropertyChanged Events

  - by Scott

  I'm in a situation where I am being informed from an outside source that a particular entity has been altered outside my current datacontext. I'm able to find the entity and call refresh like so MyDataContext.Refresh(RefreshMode.OverwriteCurrentValues, myEntity); and the properties which have been altered on the entity are updated correctly. However neither of the INotifyPropertyChanging INotifyPropertyChanged appear to be raised when the refresh occurs and this leaves my UI displaying incorrect information. I'm aware that Refresh() fails to use the correct property getters and setters on the entity to raise the change notification events, but perhaps there is another way to accomplish the same thing? Am I doing something wrong? Is there a better method than Refresh? If Refresh is the only option, does anyone have a work around?

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• iOS localization inconsistency

  - by Joe Völker

  I'm localizing an iPhone app for the first time. I've put all my strings into a Localizable.strings file, accessing them via NSLocalizedString from within my code. Works fine. Next, I have a file called info.html that contains the flesh of a UIWebView that I use as an About box. I've put it in the language folders (en.lproj and de.lproj), and added them to my Resources in Xcode. Now, in Simulator, both the Strings, and the html file display in the appropriate language. However, on the device, the Strings appear localized while the html file remains untranslated. This is a strange inconsistency between Simulator and Device! Anybody know of a workaround? (...other than defying the localization system, and using NSLocalizedString to call de_info.html, en_info.html etc. by hand.)

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• Delphi - COM/OLE starting example needed

  - by durumdara

  Hi! 10 years have ellapsed since I used COM/OLE, and I forget 90% of them. Now we need to make a COM object to access some data from PHP/Python (this is specific thing, the php ODBC don't access the output params of a DataBase - like stored proc output), and my idea the I realize a minimal object with one method, and PHP/Python can call this to get the output... procedure ExecSQL(Config, IP, Port, DBName, SQL, IDFieldName : variant) : output output is [IDValue, ErrorMsg, HResult] Please help me a very little example, how to start it? I need only this, but I'm confused by many ActiveX/COM in the palette. What I need to use to make a simple COM DLL, and how to register my COM object with this DLL? Thanks: dd

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• Allow swipe-to-delete in one instance of UITableViewDataSource, but not another

  - by synic

  I've got a UITableViewDataSource that I'm using for two different UITableViews. In one of the table views, I want to enable swipe-to-delete, so I've implemented tableView:commitEditingStyle:forRowAtIndexPath, and it works as expected. However, in another table, I want to disable that feature. I've got it working by making two UITableViewDataSource classes, one subclassing the other, and I only implement tableView:commitEditingStyle:forRowAtIndexPath in the subclass. I call them RecipientModel and RecipientModelEditable. I'm wondering if there's a better way.

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• Is it possible to alter a marked field´s field function with Word 2007 VBA?

  - by Richard

  Hi, i want do the following: In Word 2007 place the Cursor on a field (or mark that field) and call a macro wich edit the field function of that field. (add some string). I´m even grateful for some tipps what term to google. I used the macro recorder and got following: WordBasic.FormatField Field:="CITATION Gro05 \p 9 \l 1031" Thats obvious creats a new field but where to go from here? To get the selected field i thought about something like this: If Selection.Type = WdFieldType Then ... I hope someone give me some hints :) Bye Richard

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• Replacement background image not showing when using GreaseMonkey

  - by Dave C

  I'm trying to use GreaseMonkey to replace the background image of a DIV on bing.com. It's a pretty straightforward call to GM_addstyle: GM_addStyle(".sw_logo " +"{background:url('http://www.kpao.org/blog/kpao-bing-logo-inverse.png') " +"no-repeat 21px 7px transparent}"); However, the image doesn't show up. It's clearly visible in Firebug, and as I twiddle with the CSS in Firebug, I can get it to show up. But it doesn't stay. Any thoughts on why? Maybe it's a bug, but then maybe I'm missing something obvious. Thanks!

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• Unit Testing functions within repository interfaces - ASP.net MVC3 & Moq

  - by RawryLions

  I'm getting into writing unit testing and have implemented a nice repository pattern/moq to allow me to test my functions without using "real" data. So far so good.. However.. In my repository interface for "Posts" IPostRepository I have a function: Post getPostByID(int id); I want to be able to test this from my Test class but cannot work out how. So far I am using this pattern for my tests: [SetUp] public void Setup() { mock = new Mock<IPostRepository>(); } [Test] public void someTest() { populate(10); //This populates the mock with 10 fake entries //do test here } In my function "someTest" I want to be able to call/test the function GetPostById. I can find the function with mock.object.getpostbyid but the "object" is null. Any help would be appreciated :) iPostRepository: public interface IPostRepository { IQueryable<Post> Posts {get;} void SavePost(Post post); Post getPostByID(int id); }

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• GCC, functions, and pointer arguments, warning behaviour

  - by James Morris

  I've recently updated to a testing distribution, which is now using GCC 4.4.3. Now I've set everything up, I've returned to coding and have built my project and I get one of these horrible messages: *** glibc detected *** ./boxyseq: free(): invalid pointer: 0x0000000001d873e8 *** I absolutely know what is wrong here, but was rather confused as to when I saw my C code where I call a function which frees a dynamically allocated data structure - I had passed it an incompatible pointer type - a pointer to a completely different data structure. warning: passing argument 1 of 'data_A_free' from incompatible pointer type note: expected 'struct data_A *' but argument is of type 'struct data_B *' I'm confused because I'm sure this would have been an error before and compilation would never have completed. Is this not just going to make life more difficult for C programmers? Can I change it back to an error without making a whole bunch of other warnings errors too? Or am I loosing the plot and it's always been a warning?

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• Needing forward declaration in Ruby

  - by dbarbosa

  Hi, I am trying to write a Ruby script in one file. I would like to know if it is possible to write the "main" function in the beginning, having the other functions that are used by main, defined after it. In other words, I would like to call a not yet defined function, so that they do not depends on definition order. Just changing the order is not possible because it gives an "undefined method" error. In C/C++ we use forward declarations... is there something similar in Ruby or another solution to this?

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• FreeLibrary vs implicit unloading DLL

  - by Adil

  I have implemented a DLL including DllMain() entry function:- BOOL APIENTRY DllMain( HMODULE hModule, DWORD ul_reason_for_call, LPVOID lpReserved ) { case DLL_PROCESS_ATTACH: ... case DLL_THREAD_ATTACH: ... case DLL_THREAD_DETACH: ... case DLL_PROCESS_DETACH: ... } Unfortunately i made a mistake in DLL_PROCESS_DETACH case and accessing illegal memorey (access violation). I made a sample program which loads the library using LoadLibrary() function, uses the library function and finally call FreeLibrary() and return. When i executed this program, i didnt get any error message. But if i remove FreeLibrary(), in that case the DLL_PROCESS_DETACH case is executed implicitly and this time it gives error dialog box mentioning that there is access violation. Why calling FreeLibrary() suppress this error? OR internally it handles this exception? What is suggested way.

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• productsRequest response method is not calling

  - by jeeva

  Hi i am implementing in app purchase i am sending request to apple store through - (void) requestProductData { SKProductsRequest *request= [[SKProductsRequest alloc] initWithProductIdentifiers: [NSSet setWithObjects: featureAId,featureBId,nil]]; // add any other product here request.delegate = self; [request start]; } the response method - (void)productsRequest:(SKProductsRequest *)request didReceiveResponse:(SKProductsResponse *)response { [purchasableObjects addObjectsFromArray:response.products]; } is not getting call at all. only once it called out of ten attempts i tried. any idea regarding this..? thanks in advance

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• VB.NET function that takes other functions as a parameter, and executes them

  - by rob

  Hello, Is there a way in vb.net to create a sub/function that will take as an argument some kind of pointer to another function, and allow this new sub/function to execute the passed function? What I have are 10-12 xml-rpc functions I am calling against a remote server. Each of these functions has different argument lists (one takes 1 string, another might take 3 strings and one int, etc). All of them return an object. As I am calling these, it seems like it should be able to be factored better. For instance, everytime I call any of these functions, I want to test the return value for a session drop, and do something to try and reconnect to the remote system, etc. Using .net 3.5 Thanks! -R

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• How does one use dynamic recompilation?

  - by acidzombie24

  It came to my attention some emulators and virtual machines use dynamic recompilation. How do they do that? In C i know how to call a function in ram using typecasting (although i never tried) but how does one read opcodes and generate code for it? Does the person need to have premade assembly chunks and copy/batch them together? is the assembly written in C? If so how do you find the length of the code? How do you account for system interrupts?

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• Showing Live Wallpaper in a 1.6 target app by detecting if it's a 2.1 device?

  - by itamarw

  We're building an Android app with target SDK 1.6, so it will run on 1.6 devices and higher. We'd like to support Live Wallpapers, which we know is 2.1+ only. Is there a way to build one app with 1.6 SDK as the target, but detect if the device it's running on is 2.1, and only in that scenario call the live wallpaper API. We're trying to avoid having to build a separate 1.6 and 2.1 versions, and would like to be able to support Live Wallpapers for only 2.1 devices. So to be clear- 1 app, that can support 1.6 and higher, and support live wallpapers for 2.1 devices. Any way of doing this?

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• Powershell - Splitting variable into chunks

  - by Andrew

  I have written a query in Powershell interrogating a F5 BIG-IP box through it's iControl API to bring back CPU usage etc. Using this code (see below) I can return the data back into a CSV format which is fine. However the $csvdata variable contains all the data. I need to be able to take this variable and for each line split each column of data into a seperate variable. The output currently looks like this: timestamp,"Utilization" 1276181160,2.3282800000e+00 Any advice would be most welcome $SystemStats = (Get-F5.iControl).SystemStatistics ### Allocate a new Query Object and add the inputs needed $Query = New-Object -TypeName iControl.SystemStatisticsPerformanceStatisticQuery $Query.object_name = $i $Query.start_time = $startTime $Query.end_time = 0 $Query.interval = $interval $Query.maximum_rows = 0 ### Make method call passing in an array of size one with the specified query $ReportData = $SystemStats.get_performance_graph_csv_statistics( (,$Query) ) ### Allocate a new encoder and turn the byte array into a string $ASCII = New-Object -TypeName System.Text.ASCIIEncoding $csvdata = $ASCII.GetString($ReportData[0].statistic_data)

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• How to Access a Private Variable?

  - by SoulBeaver

  This question isn't meant to sound as blatantly insulting as it probably is right now. This is a homework assignment, and the spec sheet is scarce and poorly designed to say the least. We have a function: double refuel( int liter, GasStation *gs ) { // TODO: Access private variable MaxFuel of gs and decrement. } Sound simple enough? It should be, but the class GasStation comes with no function that accesses the private variable MaxFuel. So how can I access it anyway using the function refuel? I'm not considering creating a function setFuel( int liter ) because the teacher always complains rather energetically if I change his specification. So... I guess I have to do some sort of hack around it, but I'm not sure how to go about this without explicitely changing the only function in GasStation and giving it a parameter so that I can call it here. Any hints perhaps?

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• Is this a well known design pattern? what is it's name

  - by GenEric35

  Hi I have seen this often in code, but when I speak of it i don't know the name of such 'pattern' I have a method with 2 arguments that calls an overloaded method that has 3 arguments and intentionality sets the 3rd one to empty string. public DoWork(string name, string phoneNumber) { CreateContact(name, phoneNumber, string.Empty) } public DoWork(string name, string phoneNumber, string emailAddress) { //do the work } The reason I'm doing this is I to not duplicate code, and allow the existing callers to still call the method that has only 2 parameters. I have associate a few tags to this question, but it probably fit in more categories of questions. Is this a pattern, and does it have a name?

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• Techniques to avoid DeadlineExceededException in GAE/J?

  - by Tahir Akram

  I am developing an Twitter4J web application in Google App Engine/Java. I need to show two lists. One is Twitter friends and other is followers. With photo and screen name. It is working fine for people who have 20-30 followers and friends. But it gave me DeadlineExceededException when I try a user who has 150+ followers and friends. GAE throws this exception if web request take time more than 30 seconds. So what techniques I can adopt to avoid this exception. Should I generate two AJAX calls for each of my list. After page loads. So that every call will have its own 30 secs limit? Or what else you think? I am gone make it. Please help.

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• wxWidgets errors occur after upgrading gDEBugger

  - by acekiller

  all. Today I upgraded my gDEBugger (though I don't think it involves gDEBugger) to the latest version but problem occurs. When I tried to open gDEBugger, an alert window named "wxWidgets Debug Alert" pop-up, reporting that "....\src\common\xpmdecod.cpp(822):assert "i==colors_cnt" failed in wxXPMDecoder::ReadData(). Call stack: [00]wxConsole....balabala....", like follows. All these words seem just like warnings and didn't affect the following work, however I am wondering why this problem occurs? What's the root cause? I am not familiar with wxWidgets and hopes those guru on it can help me resolve it.

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• s3 / php script looping (strace)

  - by Neil

  Anyone using the following php S3 client library? http://undesigned.org.za/2007/10/22/amazon-s3-php-class It's been working fine for me for a few days, just noticed that a script I have in place now just ends up hanging. Running this through strace, I see something like: poll([{fd=4, events=POLLOUT}], 1, 1000) = 1 ([{fd=4, revents=POLLHUP}]) poll([{fd=4, events=POLLOUT}], 1, 0) = 1 ([{fd=4, revents=POLLHUP}]) poll([{fd=4, events=POLLOUT}], 1, 1000) = 1 ([{fd=4, revents=POLLHUP}]) poll([{fd=4, events=POLLOUT}], 1, 0) = 1 ([{fd=4, revents=POLLHUP}]) poll([{fd=4, events=POLLOUT}], 1, 1000) = 1 ([{fd=4, revents=POLLHUP}]) Looking at what's running, I see that it's not even getting to the point where it makes the curl call. Any thoughts? Thanks!

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• JavaScript Metaprogramming: Reduce boilerplate of adding functions to a function queue

  - by thurn

  I'm working with animation in JavaScript, and I have a bunch of functions you can call to add things to the animation queue. Basically, all of these functions look like this: function foo(arg1, arg2) { _eventQueue.push(function() { // actual logic } } I'm wondering now if it would be possible to cut down on this boilerplate a little bit, though, so I don't need that extra "_eventQueue" line in the function body dozens of times. Would it be possible, for example, to make a helper function which takes an arbitrary function as an argument and returns a new function which is augmented to be automatically added to the event queue? The only problem is that I need to find a way to maintain access to the function's original arguments in this process, which is... complicated.

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• Embedded web server and gui framework for .NET applications

  - by Toad

  Hi, I'm looking for a framework which allows me to manage my application through a webbased GUI (using an embedded webserver) instead of winforms. Something like this: http://www.webtoolkit.eu/wt but then for .NET In my code I should be able to instantiate classes (like buttons, forms etc), and when a user browses to a given port, the app should render it as javascript/ajax etc etc. preferably, when buttons are pushed, a notification in my code should be called. this is a less specific question than another one I posted about extjs. I hope this will attract more viewers since it is more generic Thanks. Update: cassini like solutions don't fit the bill. Since the webbrowser is embedded in my application, there is no need for ASP.NET server side scripts. I would rather have the framework, call functions inside my application when things happen on the page. onButtonClicked() for instance.

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