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  • How to use a string as a delimiter shell script

    - by Dan
    I am reading a line and am using regex to match it in my script. (/bin/bash) echo $line | grep -E '[Ss][Uu][Bb][Jj][Ee][Cc][Tt]: [Hh][Ee][Ll][Pp]' > /dev/null 2>&1 if [[ $? = "0" && -z $subject ]]; then subject=`echo $line | cut -d: -f2` > /dev/null echo "Was able to grab a SUBJECT $line and the actual subject is -> $subject" >> $logfile fi now my problem is that i use the colon as the delimiter. but sometimes the email will have multiple colons in the subject and so I am not able to grab the whole subject because of that. I am looking for a way to grab everything after the colon following subject. even is there is a way to loop through and check for a colon or what. maybe cut allows you to cut with a string as delimiter? Not sure...any ideas? Thanks!

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  • Make function declarations based on function definitions

    - by Clinton Blackmore
    I've written a .cpp file with a number of functions in it, and now need to declare them in the header file. It occurred to me that I could grep the file for the class name, and get the declarations that way, and it would've worked well enough, too, had the complete function declaration before the definition -- return code, name, and parameters (but not function body) -- been on one line. It seems to me that this is something that would be generally useful, and must've been solved a number of times. I am happy to edit the output and not worried about edge cases; anything that gives me results that are right 95% of the time would be great. So, if, for example, my .cpp file had: i2cstatus_t NXTI2CDevice::writeRegisters( uint8_t start_register, // start of the register range uint8_t bytes_to_write, // number of bytes to write uint8_t* buffer = 0) // optional user-supplied buffer { ... } and a number of other similar functions, getting this back: i2cstatus_t NXTI2CDevice::writeRegisters( uint8_t start_register, // start of the register range uint8_t bytes_to_write, // number of bytes to write uint8_t* buffer = 0) for inclusion in the header file, after a little editing, would be fine. Getting this back: i2cstatus_t writeRegisters( uint8_t start_register, uint8_t bytes_to_write, uint8_t* buffer); or this: i2cstatus_t writeRegisters(uint8_t start_register, uint8_t bytes_to_write, uint8_t* buffer); would be even better.

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  • parsing urls from windows batch file

    - by modest
    I have a text file (myurls.txt) whose contents are a list of URLs as follow: Slides_1: http://linux.koolsolutions.com/svn/ProjectA/tags/REL-1.0 Exercise_1: http://linux.koolsolutions.com/svn/ProjectA/tags/REL-1.0 Slides_2: http://linux.koolsolutions.com/svn/oldproject/ProjectB/tags/REL-2.0 Exercise_2: http://linux.koolsolutions.com/svn/ProjectB/tags/REL-1.0 Exercise_3: http://linux.koolsolutions.com/svn/BlueBook/ProjectA/tags/REL-1.0 Now I want to parse this text file in a for loop such that after each iteration (for e.g. take the first url from the above file) I have the following information into different variables: %i% = REL-1.0 %j% = http://linux.koolsolutions.com/svn/ProjectA %k% = http://linux.koolsolutions.com/svn/ProjectA/tags/REL-1.0 After some experiment I have the following code but it only works (kind of) if the URLs have same number of slashes: @echo off set FILE=myurls.txt FOR /F "tokens=2-9 delims=/ " %%i in (%FILE%) do ( @REM <do something with variables i, j and k.> ) I am fine with other solutions like for e.g. using Windows Script Host/VBS script as long as it can run with a default Windows XP/7 installation. In other words, I know I can use awk, grep, sed, python, etc. for Windows and get the job done but I don't want the users to have to install anything besides a standard windows installation.

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  • KSH: Variables containing double quotes

    - by nitrobass24
    I have a string called STRING1 that could contain double quotes. I am echoing the string through sed to pull out puntuation then sending to array to count certain words. The problem is I cannot echo variables through double quotes to sed. I am crawling our filesystems looking for files that use FTP commands. I grep each file for "FTP" STRING1=`grep -i ftp $filename` If you echo $STRING1 this is the output (just one example) myserver> echo "Your file `basename $1` is too large to e-mail. You must ftp the file to BMC tech support. \c" echo "Then, ftp it to ftp.bmc.com with the user name 'anonymous.' \c" echo "When the ftp is successful, notify technical support by phone (800-537-1813) or by e-mail ([email protected].)" Then I have this code STRING2=`echo $STRING1|sed 's/[^a-zA-Z0-9]/ /g'` I have tried double quoting $STRING1 like STRING2=`echo "$STRING1"|sed 's/[^a-zA-Z0-9]/ /g'` But that does not work. Single Qoutes, just sends $STRING1 as the string to sed...so that did not work. What else can I do here?

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  • Why is my Perl script that calls FTP all of a sudden failing?

    - by Mel
    I have a script that has been running for over a year and now it is failing: It is creating a command file: open ( FTPFILE, ">get_list"); print FTPFILE "dir *.txt"\n"; print FTPFILE "quit\n"; close FTPFILE; Then I run the system command: $command = "ftp ".$Server." < get_list | grep \"\^-\" >new_list"; $code = system($command); The logic the checks: if ($code == 0) { do stuff } else { log error } It is logging an error. When I print the $code variable, I am getting 256. I used this command to parse the $? variable: $exit_value = $? >> 8; $signal_num = $? & 127; $dumped_core = $? & 128; print "Exit: $exit_value Sig: $signal_num Core: $dumped_core\n"; Results: Exit: 1 Sig: 0 Core: 0 Thanks for any help/insight.

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  • perl system command return code

    - by Mel
    I have a script that has been running for over a year and now it is failing: It is creating a command file: open ( FTPFILE, ">get_list"); print FTPFILE "dir *.txt"\n"; print FTPFILE "quit\n"; close FTPFILE; Then I run the system command: $command = "ftp ".$Server." < get_list | grep \"\^-\" >new_list"; $code = system($command); The logic the checks: if ($code == 0) { do stuff } else { log error } It is logging an error. When I print the $code variable, I am getting 256. I used this command to parse the $? variable: $exit_value = $? >> 8; $signal_num = $? & 127; $dumped_core = $? & 128; print "Exit: $exit_value Sig: $signal_num Core: $dumped_core\n"; Results: Exit: 1 Sig: 0 Core: 0 Thanks for any help/insight.

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  • Intelligent search and generation of Java code, preferrably using Python?

    - by Ipsquiggle
    Basically, I do lots of one-off code generation, large-scale refactorings, etc. etc. in Java. My tool language of choice is Python, but I'll take whatever solutions you can offer. Here is a simplified illustration of what I would like, in a pseudocode Generating an implementation for an interface search within my project: for each Interface as iName: write class(name=iName+"Impl", implements=iName) search within the body of iName: for each Method as mName: write method(name=mName, body="// TODO implement this...") Basically, the tool I'm searching for would allow me to: parse files according to their Java structure ("search for interfaces") search for words contextualized by language elements and types ("variables of type SomeClass", "doStuff() method calls on SomeClass instances") to run searches with structural context ("within the body of the current result") easily replace or generate code (with helpers to generate, as above, or functions for replacing, "rename the interface to Foo", "insert the line Blah.Blah()", etc.) The point is, I don't want to spend a lot of time writing these things, as they are usually throwaway. But sometimes I need something just a little smarter than what grep offers. It wouldn't be too hard to write up a simplistic version of this, but if I'm going to use something like this at all, I'd expect it to be robust. Any suggestions of a tool/library that will help me accomplish this?

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  • Coding the R-ight way - avoiding the for loop

    - by mropa
    I am going through one of my .R files and by cleaning it up a little bit I am trying to get more familiar with writing the code the r-ight way. As a beginner, one of my favorite starting points is to get rid of the for() loops and try to transform the expression into a functional programming form. So here is the scenario: I am assembling a bunch of data.frames into a list for later usage. dataList <- list (dataA, dataB, dataC, dataD, dataE ) Now I like to take a look at each data.frame's column names and substitute certain character strings. Eg I like to substitute each "foo" and "bar" with "baz". At the moment I am getting the job done with a for() loop which looks a bit awkward. colnames(dataList[[1]]) [1] "foo" "code" "lp15" "bar" "lh15" colnames(dataList[[2]]) [1] "a" "code" "lp50" "ls50" "foo" matchVec <- c("foo", "bar") for (i in seq(dataList)) { for (j in seq(matchVec)) { colnames (dataList[[i]])[grep(pattern=matchVec[j], x=colnames (dataList[[i]]))] <- c("baz") } } Since I am working here with a list I thought about the lapply function. My attempts handling the job with the lapply function all seem to look alright but only at first sight. If I write f <- function(i, xList) { gsub(pattern=c("foo"), replacement=c("baz"), x=colnames(xList[[i]])) } lapply(seq(dataList), f, xList=dataList) the last line prints out almost what I am looking for. However, if i take another look at the actual names of the data.frames in dataList: lapply (dataList, colnames) I see that no changes have been made to the initial character strings. So how can I rewrite the for() loop and transform it into a functional programming form? And how do I substitute both strings, "foo" and "bar", in an efficient way? Since the gsub() function takes as its pattern argument only a character vector of length one.

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  • Word frequency tally script is too slow

    - by Dave Jarvis
    Background Created a script to count the frequency of words in a plain text file. The script performs the following steps: Count the frequency of words from a corpus. Retain each word in the corpus found in a dictionary. Create a comma-separated file of the frequencies. The script is at: http://pastebin.com/VAZdeKXs Problem The following lines continually cycle through the dictionary to match words: for i in $(awk '{if( $2 ) print $2}' frequency.txt); do grep -m 1 ^$i\$ dictionary.txt >> corpus-lexicon.txt; done It works, but it is slow because it is scanning the words it found to remove any that are not in the dictionary. The code performs this task by scanning the dictionary for every single word. (The -m 1 parameter stops the scan when the match is found.) Question How would you optimize the script so that the dictionary is not scanned from start to finish for every single word? The majority of the words will not be in the dictionary. Thank you!

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  • Bash script not working on a new dedicated server

    - by Scott
    Recently I have migrated to the new dedicated server which is running on the same operating system - FreeBSD 8.2. I got a root account access and all permissions have been set properly. My problem is that, the bash script I was running on the old server doesn't works on the new machine, the only error appearing while running the script is: # sh script.sh script.sh: 3: Syntax error: word unexpected (expecting ")") Here is the code itself: #!/usr/local/bin/bash PORTS=(7777:GAME 11000:AUTH 12000:DB) MESSG="" for i in ${PORTS[@]} ; do PORT=${i%%:*} DESC=${i##*:} CHECK=`sockstat -4 -l | grep :$PORT | awk '{print $3}' | head -1` if [ "$CHECK" -gt 1 ]; then echo $DESC[$PORT] "is up ..." $CHECK else MESSG=$MESSG"$DESC[$PORT] wylaczony...\n" if [ "$DESC" == "AUTH" ]; then MESSG=$MESSG"AUTH is down...\n" fi if [ "$DESC" == "GAME" ]; then MESSG=$MESSG"GAME is down...\n" fi if [ "$DESC" == "DB" ]; then MESSG=$MESSG"DB is down...\n" fi fi done if [ -n "$MESSG" ]; then echo -e "Some problems ocurred:\n\n"$MESSG | mail -s "Problems" [email protected] fi I don't really code in bash, so I don't know why this happend...

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  • Remove file from history completely

    - by Iain
    A colleague has done a few things I told them not to do: forked the origin repo online cloned the fork, added a file that shouldn't have been added to that local repo pushed this to their fork I've then: merged the changes from the fork and found the file I want to remove this from: my local repo the fork their local repo I have a solution for removing something from the history, taken from Remove file from git repository (history). What I need to know is, should my colleague also go through this, and will a subsequent push remove all info from the fork? (I'd like an alternative to just destroying the fork, as I'm not sure my colleague will do this) SOLUTION: This is the shortest way to get rid of the files: check .git/packed-refs - my problem was that I had there a refs/remotes/origin/master line for a remote repository, delete it, otherwise git won't remove those files (optional) git verify-pack -v .git/objects/pack/#{pack-name}.idx | sort -k 3 -n | tail -5 - to check for the largest files (optional) git rev-list --objects --all | grep a0d770a97ff0fac0be1d777b32cc67fe69eb9a98 - to check what files those are git filter-branch --index-filter 'git rm --cached --ignore-unmatch file_names' - to remove the file from all revisions rm -rf .git/refs/original/ - to remove git's backup git reflog expire --all --expire='0 days' - to expire all the loose objects (optional) git fsck --full --unreachable - to check if there are any loose objects git repack -A -d - repacking the pack git prune - to finally remove those objects

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  • Shell script for generating HTML out put

    - by user1638016
    The following script is generating the desired out put but not redirecting the result to /home/myuser/slavedelay.html #!/bin/bash host=<ip> echo $host user=usr1 password=mypass threshold=300 statusok=OK statuscritical=CRITICAL for i in ert7 ert9 do echo "<html>" > /home/myuser/slavedelay.html if [ "$i" == "ert7" ]; then slvdelay=`mysql -u$user -p$password -h<ip> -S /backup/mysql/mysql.sock -e 'show slave status\G' | grep Seconds_Behind_Master | sed -e 's/ *Seconds_Behind_Master: //'` if [ $slvdelay -ge $threshold ]; then echo "<tr><td>$i</td><td>CRITICAL</td>" >> /home/myuser/slavedelay.html echo "<tr><td>$i</td><td>CRITICAL</td>" else echo "<tr><td>$i</td><td>OK</td>" >> /home/myuser/slavedelay.html echo "<tr><td>$i</td><td>OK</td>" fi fi done echo "</html>" >> /home/myuser/slavedelay.html If I cat the output file /home/myuser/slavedelay.html it gives. <html> </html> Execution result : sh slave_delay.sh <tr><td>sdb7</td><td>OK</td>

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  • How to use Jquery UI in my Custom Function? (Autocomplete)

    - by bakazero
    I want to create a function to simplify configuration of jQuery UI AutoComplete. Here is my function code: (function($) { $.fn.myAutocomplete = function() { var cache = {}; var dataUrl = args.dataUrl; var dataSend = args.dataItem; $.autocomplete({ source: function(request, response) { if (cache.term == request.term && cache.content) { response(cache.content); } if (new RegExp(cache.term).test(request.term) && cache.content && cache.content.length < 13) { var matcher = new RegExp($.ui.autocomplete.escapeRegex(request.term), "i"); response($.grep(cache.content, function(value) { return matcher.test(value.value) })); } $.ajax({ url: dataUrl, dataType: "json", type: "POST", data: dataSend, success: function(data) { cache.term = request.term; cache.content = data; response(data); } }); }, minLength: 2, }); } }) (jQuery); but when I'm using this function like: $("input#tag").myAutocomplete({ dataUrl: "/auto_complete/tag", dataSend: { term: request.term, category: $("input#category").val() } }); It's give me an error: Uncaught ReferenceError: request is not defined

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  • Container of Generic Types in java

    - by Cyker
    I have a generic class Foo<T> and parameterized types Foo<String> and Foo<Integer>. Now I want to put different parameterized types into a single ArrayList. What is the correct way of doing this? Candidate 1: public class MMM { public static void main(String[] args) { Foo<String> fooString = new Foo<String>(); Foo<Integer> fooInteger = new Foo<Integer>(); ArrayList<Foo<?> > list = new ArrayList<Foo<?> >(); list.add(fooString); list.add(fooInteger); for (Foo<?> foo : list) { // Do something on foo. } } } class Foo<T> {} Candidate 2: public class MMM { public static void main(String[] args) { Foo<String> fooString = new Foo<String>(); Foo<Integer> fooInteger = new Foo<Integer>(); ArrayList<Foo> list = new ArrayList<Foo>(); list.add(fooString); list.add(fooInteger); for (Foo foo : list) { // Do something on foo. } } } class Foo<T> {} In a word, it is related to the difference between Foo<?> and the raw type Foo. Update: Grep What is the difference between the unbounded wildcard parameterized type and the raw type? on this link may be helpful.

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  • Rails using plural table names even though I told it to use singular

    - by Jason Swett
    I tried to run rake test:profile and I got this error: ... Table 'mcif2.accounts' doesn't exist: DELETE FROM `accounts` I know accounts doesn't exist. It's called account. I know Rails uses plural table names by default but here's what my config/environment.rb looks like: # Load the rails application require File.expand_path('../application', __FILE__) # Initialize the rails application McifRails::Application.initialize! ActiveRecord::Base.pluralize_table_names = false And here's what db/schema.rb looks like: ActiveRecord::Schema.define(:version => 0) do create_table "account", :force => true do |t| t.integer "customer_id", :limit => 8, :null => false t.string "account_number", :null => false t.integer "account_type_id", :limit => 8 t.date "open_date", :null => false So I don't understand why Rails still wants to call it accounts sometimes. Any ideas? If it helps give any clues at all, here are the results of grep -ir 'accounts' *.

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  • nginx php5-fpm "File not found" -- FastCGI sent in stderr: "Primary script unknown"

    - by jmfayard
    so I'm trying to run for the first time the nginx web server with php5-fpm on a debian wheezy server Hitting a php file display simply File not found I have done my research (waste a lot of hours actually ;), there are a lot of people that have similar problems, yet I didn't succeed to correct it with what worked for them. I still have the same error : $ tail /var/log/nginx/access.log /var/log/nginx/error.log /var/log/php5-fpm.log | less == /var/log/nginx/error.log <== 2013/10/26 21:36:00 [error] 6900#0: *1971 FastCGI sent in stderr: "Primary script unknown" while reading response header from upstream, I have tried a lot of things, it's hard to remember what. I have put my config files on github my /etc/nginx/nginx.conf my /etc/php5/fpm/php-fpm.conf Currently, the nginx.conf configuration uses this... server { server_name mydomain.tld; root /srv/data1/test; location ~ \.php$ { try_files $uri =404; fastcgi_pass 127.0.0.1:9000; fastcgi_index index.php; fastcgi_param SCRIPT_FILENAME $document_root$fastcgi_script_name; include fastcgi_params; } } /etc/php5/fpm/pool.d/www.conf contains listen = 127.0.0.1:9000 I have tried the unix socket version, same thing. fastcgi_pass unix:/var/run/php5-fpm.sock; I made sure the server is started $ netstat -alnp | grep LISTEN tcp 0 0 127.0.0.1:9000 0.0.0.0:* LISTEN 6913/php-fpm.conf) tcp 0 0 127.0.0.1:3306 0.0.0.0:* LISTEN 4785/mysqld tcp 0 0 0.0.0.0:842 0.0.0.0:* LISTEN 2286/inetd tcp 0 0 0.0.0.0:111 0.0.0.0:* LISTEN 2812/rpcbind tcp 0 0 0.0.0.0:80 0.0.0.0:* LISTEN 5710/nginx tcp 0 0 0.0.0.0:22 0.0.0.0:* LISTEN 2560/sshd tcp 0 0 0.0.0.0:443 0.0.0.0:* LISTEN 5710/nginx tcp6 0 0 :::111 :::* LISTEN 2812/rpcbind unix 2 [ ACC ] STREAM LISTENING 323648 6574/tmux /tmp//tmux-1000/default unix 2 [ ACC ] STREAM LISTENING 619072 6790/fcgiwrap /var/run/fcgiwrap.socket unix 2 [ ACC ] SEQPACKET LISTENING 323 464/udevd /run/udev/control unix 2 [ ACC ] STREAM LISTENING 610686 2812/rpcbind /var/run/rpcbind.sock unix 2 [ ACC ] STREAM LISTENING 318633 4785/mysqld /var/run/mysqld/mysqld.sock Each time I modify the nginx.conf file, I make sure to relaunch this command nginx -t && nginx -s reload && echo "nginx configuration reloaded" and same thing for php5-fpm /etc/init.d/php5-fpm restart Thanks for your help :-)

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  • Fedora 12 Wireless problems (Intel Wireless 4965AGN Card)

    - by Ninefingers
    Hi All, I'm having an interesting experience with my wireless card at the moment. Basically, it does like this: I connect to the local wireless network (netgear router) It works, briefly, allowing me to browse a webpage or maybe two, if I'm lucky. It then stops working / sending any packets, whilst reported still connected. Now, me being me I've had a look to see what I can find. wpa_supplicant.log looks like this: Trying to associate with valid_mac:a2:30 (SSID='vennardwireless' freq=2462 MHz) Associated with valid_mac:a2:30 WPA: Key negotiation completed with valid_mac:a2:30 [PTK=CCMP GTK=TKIP] CTRL-EVENT-CONNECTED - Connection to valid_mac:a2:30 completed (reauth) [id=0 id_str=] CTRL-EVENT-DISCONNECTED - Disconnect event - remove keys So that's working fine. dmesg | grep "*iwl*" spits out this: iwlagn: Intel(R) Wireless WiFi Link AGN driver for Linux, 1.3.27kds iwlagn: Copyright(c) 2003-2009 Intel Corporation iwlagn 0000:03:00.0: PCI INT A -> GSI 17 (level, low) -> IRQ 17 iwlagn 0000:03:00.0: setting latency timer to 64 iwlagn 0000:03:00.0: Detected Intel Wireless WiFi Link 4965AGN REV=0x4 iwlagn 0000:03:00.0: Tunable channels: 13 802.11bg, 19 802.11a channels iwlagn 0000:03:00.0: irq 32 for MSI/MSI-X phy0: Selected rate control algorithm 'iwl-agn-rs' iwlagn 0000:03:00.0: firmware: requesting iwlwifi-4965-2.ucode iwlagn 0000:03:00.0: loaded firmware version 228.61.2.24 Registered led device: iwl-phy0::radio Registered led device: iwl-phy0::assoc Registered led device: iwl-phy0::RX Registered led device: iwl-phy0::TX iwlagn 0000:03:00.0: iwl_tx_agg_start on ra = 00:24:b2:32:a3:30 tid = 0 iwlagn 0000:03:00.0: iwl_tx_agg_start on ra = 00:24:b2:32:a3:30 tid = 0 So that's working too. I can also ping 192.168.0.1 -I wlan0 and arping 192.168.0.1 -I wlan0 the router until the network falls over. uname -r:2.6.32.10-90.fc12.x86_64. Laptop is a Core2 Duo (2Ghz) with 3GB RAM. Other symptoms I've noticed are that wireshark freezes when I capture on the "broken" interface until I disconnect. Am using networkmanager as per normal. Stupidly, I can connect to the same router via eth0/a cat6 cable just fine. Everyone else can connect to the AP fine (from Windows). Yes, I'm sat right next to it and not trying to access a hotspot the other side of the world. Any ideas? Is this a broken update? (I intend to reboot and test an older kernel later)? Anyone else come across this? Edit: iwconfig wlan0 rate auto is the settings I'm using for rates. Also, according to networkmanager the network is still connected. Thanks for any pointers / advice.

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  • JVM process resident set size "equals" max heap size, not current heap size

    - by Volune
    After a few reading about jvm memory (here, here, here, others I forgot...), I am expecting the resident set size of my java process to be roughly equal to the current heap space capacity. That's not what the numbers are saying, it seems to be roughly equal to the max heap space capacity: Resident set size: # echo 0 $(cat /proc/1/smaps | grep Rss | awk '{print $2}' | sed 's#^#+#') | bc 11507912 # ps -C java -O rss | gawk '{ count ++; sum += $2 }; END {count --; print "Number of processes =",count; print "Memory usage per process =",sum/1024/count, "MB"; print "Total memory usage =", sum/1024, "MB" ;};' Number of processes = 1 Memory usage per process = 11237.8 MB Total memory usage = 11237.8 MB Java heap # jmap -heap 1 Attaching to process ID 1, please wait... Debugger attached successfully. Server compiler detected. JVM version is 24.55-b03 using thread-local object allocation. Garbage-First (G1) GC with 18 thread(s) Heap Configuration: MinHeapFreeRatio = 10 MaxHeapFreeRatio = 20 MaxHeapSize = 10737418240 (10240.0MB) NewSize = 1363144 (1.2999954223632812MB) MaxNewSize = 17592186044415 MB OldSize = 5452592 (5.1999969482421875MB) NewRatio = 2 SurvivorRatio = 8 PermSize = 20971520 (20.0MB) MaxPermSize = 85983232 (82.0MB) G1HeapRegionSize = 2097152 (2.0MB) Heap Usage: G1 Heap: regions = 2560 capacity = 5368709120 (5120.0MB) used = 1672045416 (1594.586769104004MB) free = 3696663704 (3525.413230895996MB) 31.144272834062576% used G1 Young Generation: Eden Space: regions = 627 capacity = 3279945728 (3128.0MB) used = 1314914304 (1254.0MB) free = 1965031424 (1874.0MB) 40.089514066496164% used Survivor Space: regions = 49 capacity = 102760448 (98.0MB) used = 102760448 (98.0MB) free = 0 (0.0MB) 100.0% used G1 Old Generation: regions = 147 capacity = 1986002944 (1894.0MB) used = 252273512 (240.5867691040039MB) free = 1733729432 (1653.413230895996MB) 12.702574926293766% used Perm Generation: capacity = 39845888 (38.0MB) used = 38884120 (37.082786560058594MB) free = 961768 (0.9172134399414062MB) 97.58628042120682% used 14654 interned Strings occupying 2188928 bytes. Are my expectations wrong? What should I expect? I need the heap space to be able to grow during spikes (to avoid very slow Full GC), but I would like to have the resident set size as low as possible the rest of the time, to benefit the other processes running on the server. Is there a better way to achieve that? Linux 3.13.0-32-generic x86_64 java version "1.7.0_55" Running in Docker version 1.1.2 Java is running elasticsearch 1.2.0: /usr/bin/java -Xms5g -Xmx10g -XX:MinHeapFreeRatio=10 -XX:MaxHeapFreeRatio=20 -Xss256k -Djava.awt.headless=true -XX:+UseG1GC -XX:MaxGCPauseMillis=350 -XX:InitiatingHeapOccupancyPercent=45 -XX:+AggressiveOpts -XX:+UseCompressedOops -XX:-OmitStackTraceInFastThrow -XX:+PrintGCDetails -XX:+PrintGCTimeStamps -XX:+PrintClassHistogram -XX:+PrintTenuringDistribution -XX:+PrintGCApplicationStoppedTime -XX:+PrintGCApplicationConcurrentTime -Xloggc:/opt/elasticsearch/logs/gc.log -XX:+HeapDumpOnOutOfMemoryError -XX:HeapDumpPath=/opt elasticsearch/logs/heapdump.hprof -XX:ErrorFile=/opt/elasticsearch/logs/hs_err.log -Des.logger.port=99999 -Des.logger.host=999.999.999.999 -Delasticsearch -Des.foreground=yes -Des.path.home=/opt/elasticsearch -cp :/opt/elasticsearch/lib/elasticsearch-1.2.0.jar:/opt/elasticsearch/lib/*:/opt/elasticsearch/lib/sigar/* org.elasticsearch.bootstrap.Elasticsearch There actually are 5 elasticsearch nodes, each in a different docker container. All have about the same memory usage. Some stats about the index: size: 9.71Gi (19.4Gi) docs: 3,925,398 (4,052,694)

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  • Unable to delete a file using bash script

    - by user3719091
    I'm having problems removing a file in a bash script. I saw the other post with the same problem but none of those solutions solved my problem. The bash script is an OP5 surveillance check and it calls an Expect process that saves a temporary file to the local drive which the bash script reads from. Once it has read the file and checked its status I would like to remove the temporary file. I'm pretty new to scripting so my script may not be as optimal as it can be. Either way it does the job except removing the file once it's done. I will post the entire code below: #!/bin/bash #GET FLAGS while getopts H:c:w: option do case "${option}" in H) HOSTADDRESS=${OPTARG};; c) CRITICAL=${OPTARG};; w) WARNING=${OPTARG};; esac done ./expect.vpn.check.sh $HOSTADDRESS #VARIABLES VPNCount=$(grep -o '[0-9]\+' $HOSTADDRESS.op5.vpn.results) # Check if the temporary results file exists if [ -f $HOSTADDRESS.op5.vpn.results ] then # If the file exist, Print "File Found" message echo Temporary results file exist. Analyze results. else # If the file does NOT exist, print "File NOT Found" message and send message to OP5 echo Temporary results file does NOT exist. Unable to analyze. # Exit with status Critical (exit code 2) exit 2 fi if [[ "$VPNCount" > $CRITICAL ]] then # If the amount of tunnels exceeds the critical threshold, echo out a warning message and current threshold and send warning to OP5 echo "The amount of VPN tunnels exceeds the critical threshold - ($VPNCount)" # Exit with status Critical (exit code 2) exit 2 elif [[ "$VPNCount" > $WARNING ]] then # If the amount of tunnels exceeds the warning threshold, echo out a warning message and current threshold and send warning to OP5 echo "The amount of VPN tunnels exceeds the warning threshold - ($VPNCount)" # Exit with status Warning (exit code 1) exit 1 else # The amount of tunnels do not exceed the warning threshold. # Print an OK message echo OK - $VPNCount # Exit with status OK exit 0 fi #Clean up temporary files. rm -f $HOSTADDRESS.op5.vpn.results I have tried the following solutions: Create a separate variable called TempFile that specifies the file. And specify that in the rm command. I tried creating another if statement similar to the one I use to verify that file exist and then rm the filename. I tried adding the complete name of the file (no variables, just plain text of the file) I can: Remove the file using the full name in both a separate script and directly in the CLI. Is there something in my script that locks the file that prevents me from removing it? I'm not sure what to try next. Thanks in advance!

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  • Installing OpenLDAP on Fedora 12: ldap_bind: Invalid credentials (49)

    - by Arcturus
    Hello. I've been trying to set up the OpenLDAP installed by default on Fedora 12, very unsuccessfully. My ultimate goal is to use LDAP authentication for user login and Apache, using the OpenLDAP server running on the same machine. The server is running, but the error I always get when I try to use ldapsearch or ldapadd is: ldap_bind: Invalid credentials (49) I've been following these tutorials, but none of them helped me: http://www.howtoforge.com/openldap_fedora7 http://www.redhat.com/docs/manuals/linux/RHL-9-Manual/ref-guide/s1-ldap-quickstart.html http://www.howtoforge.com/linux_ldap_authentication http://docs.fedoraproject.org/deployment-guide/f12/en-US/html/s1-ldap-pam.html http://www.openldap.org/doc/admin24/quickstart.html First, some components were already installed, and I installed these with yum: yum install openldap-servers openldap-devel Then, I created a basic slapd.conf file in /etc/openldap: database bdb suffix "dc=sniejana-sandbox,dc=com" rootdn "cn=root,dc=sniejana-sandbox,dc=com" rootpw {SSHA}cxdz55ygPu4T3ykg7dgu+L0VRvsFSeom directory /var/lib/ldap/sniejana-sandbox.com I obtained the rootpw with this command: slappasswd -s changeme I also created the /var/lib/ldap/sniejana-sandbox.com directory and made sure the entire contents of /var/lib/ldap were owned by the ldap user. I found two ldap.conf files, one in /etc and one in /etc/openldap. I don't know which is the right one. If I understood correctly, this file is to configure the client. I put this in both: HOST localhost BASE dc=sniejana-sandbox,dc=com I then ran the server with: service slapd start It said OK. Most of the tutorials above say to use the command ldapsearch -D "cn=Manager,dc=my-domain,dc=com" -W to ensure that everything's working. When I execute this command, a password prompt appears, and after entering the password, I get the error. ldapsearch -D "cn=root,dc=sniejana-sandbox,dc=com" -W Enter LDAP password: ldap_bind: Invalid credentials (49) The same thing happens when trying to use ldapadd. I tried with an encrypted and unencrypted password in slapd.conf, it doesn't change anything. Adding a -x for simple authentication doesn't change anything either. netstat -ap confirms the server is listening: tcp 0 0 *:ldap *:* LISTEN 4148/slapd tcp 0 0 *:ldap *:* LISTEN 4148/slapd ps -ef|grep slapd confirms the process is running: ldap 4148 1 0 15:22 ? 00:00:00 /usr/sbin/slapd -h ldap:/// -u ldap Running slaptest procudes config file testing succeeded. I read somewhere that the command ldapsearch -x -b '' -s base '(objectclass=*)' namingContext can confirm the server is running. It appears to work: # extended LDIF # # LDAPv3 # base <> with scope baseObject # filter: (objectclass=*) # requesting: namingContext # # dn: # search result search: 2 result: 0 Success # numResponses: 2 # numEntries: 1 I'm running out of ideas. Am I missing something obvious?

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  • cron doesn't execute it's commands

    - by Silvio Keller
    I created an own small server with Debian. Last night i updated it. It created an error while generating the initrd and it didn't boot. Today i booted from another filesystem and did dpkg --configure -a with chroot. I also checked the filesystem. Now everything should be ok. But cron doesn't work:-( It is the same /etc/crontab-File but it doesn't work. I reinstalled cron and tried many things. Is there a way to see cron's log? I only readed about rsyslog, but i have not installed rsyslog, because the server is based on a minimal system (Freeagent Dockstar). Has someone an idea? Best regards Silvio Keller Update There is no file /var/log/syslog and dpkg -l|grep syslog gives me no output, so i think syslog is not installed. It is only a minimal system. cron -l gives: cron: can't lock /var/run/crond.pid, otherpid may be 687: Resource temporarily unavailable So i stopped cron with /etc/init.d/cron stop and executed cron -l again, this gives no output. At this moment i tried to start cron with /etc/init.d/cron start: Starting periodic command scheduler: cron failed! But there's no additional error info... But i see there's now in the background a proccess called cron -l which runs. If i stop it /etc/init.d/cron start works: Starting periodic command scheduler: cron. I used the crontab-file /etc/crontab, this worked for me always. Till i updated my kernel and the initrd it doesn't. The file's content is: SHELL=/bin/sh PATH=/usr/local/sbin:/usr/local/bin:/sbin:/bin:/usr/sbin:/usr/bin # m h dom mon dow user command 17 * * * * root cd / && run-parts --report /etc/cron.hourly 25 6 * * * root test -x /usr/sbin/anacron || ( cd / && run-parts --report /etc/cron.daily ) 47 6 * * 7 root test -x /usr/sbin/anacron || ( cd / && run-parts --report /etc/cron.weekly ) 52 6 1 * * root test -x /usr/sbin/anacron || ( cd / && run-parts --report /etc/cron.monthly ) 00 5 * * * root dummy 23 45 * * 7 root dummy 00 * * * * root dummy */1 * * * * root dummy 00 1 * * * root dummy 00 4 * * * root dummy */5 * * * * root dummy #00 */10 * * * root dummy 01 0 * * * root dummy 00 5 * * * root dummy 00 4 * * * root dummy # If i start crontab -e it creates a new file /tmp/crontab.vn87tv/crontab, which is unfortunaly on a tmpfs and which also doesn't work. Thanks & Best regards

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  • Allow anonymous upload for Vsftpd?

    - by user15318
    I need a basic FTP server on Linux (CentOS 5.5) without any security measure, since the server and the clients are located on a test LAN, not connected to the rest of the network, which itself uses non-routable IP's behind a NAT firewall with no incoming access to FTP. Some people recommend Vsftpd over PureFTPd or ProFTPd. No matter what I try, I can't get it to allow an anonymous user (ie. logging as "ftp" or "anonymous" and typing any string as password) to upload a file: # yum install vsftpd # mkdir /var/ftp/pub/upload # cat vsftpd.conf listen=YES anonymous_enable=YES local_enable=YES write_enable=YES xferlog_file=YES #anonymous users are restricted (chrooted) to anon_root #directory was created by root, hence owned by root.root anon_root=/var/ftp/pub/incoming anon_upload_enable=YES anon_mkdir_write_enable=YES #chroot_local_user=NO #chroot_list_enable=YES #chroot_list_file=/etc/vsftpd.chroot_list chown_uploads=YES When I log on from a client, here's what I get: 500 OOPS: cannot change directory:/var/ftp/pub/incoming I also tried "# chmod 777 /var/ftp/incoming/", but get the same error. Does someone know how to configure Vsftpd with minimum security? Thank you. Edit: SELinux is disabled and here are the file permissions: # cat /etc/sysconfig/selinux SELINUX=disabled SELINUXTYPE=targeted SETLOCALDEFS=0 # sestatus SELinux status: disabled # getenforce Disabled # grep ftp /etc/passwd ftp:x:14:50:FTP User:/var/ftp:/sbin/nologin # ll /var/ drwxr-xr-x 4 root root 4096 Mar 14 10:53 ftp # ll /var/ftp/ drwxrwxrwx 2 ftp ftp 4096 Mar 14 10:53 incoming drwxr-xr-x 3 ftp ftp 4096 Mar 14 11:29 pub Edit: latest vsftpd.conf: listen=YES local_enable=YES write_enable=YES xferlog_file=YES #anonymous users are restricted (chrooted) to anon_root anonymous_enable=YES anon_root=/var/ftp/pub/incoming anon_upload_enable=YES anon_mkdir_write_enable=YES #500 OOPS: bad bool value in config file for: chown_uploads chown_uploads=YES chown_username=ftp Edit: with trailing space removed from "chown_uploads", err 500 is solved, but anonymous still doesn't work: client> ./ftp server Connected to server. 220 (vsFTPd 2.0.5) Name (server:root): ftp 331 Please specify the password. Password: 500 OOPS: cannot change directory:/var/ftp/pub/incoming Login failed. ftp> bye With user "ftp" listed in /etc/passwd with home directory set to "/var/ftp" and access rights to /var/ftp set to "drwxr-xr-x" and /var/ftp/incoming to "drwxrwxrwx"...could it be due to PAM maybe? I don't find any FTP log file in /var/log to investigate. Edit: Here's a working configuration to let ftp/anonymous connect and upload files to /var/ftp: listen=YES anonymous_enable=YES write_enable=YES anon_upload_enable=YES anon_mkdir_write_enable=YES

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  • Attach radeon driver to specific PCI devices?

    - by genpfault
    I have two Radeon cards in this machine, a 6570 and a 6950: lspci | grep VGA: 01:00.0 VGA compatible controller: Advanced Micro Devices [AMD] nee ATI Turks [Radeon HD 6570] 02:00.0 VGA compatible controller: Advanced Micro Devices [AMD] nee ATI Cayman PRO [Radeon HD 6950] I'm trying to get VGA passthrough to work with KVM on Debian Wheezy, passing through the 6950 as a secondary video card to a Windows 7 guest. This works fine if I blacklist the radeon kernel module via /etc/modprobe.d/. If I remove the blacklist to run X11 (or even just a KMS console) on the 6570 the radeon module seems to attach to both cards: dmesg | egrep "01:00.0|02:00.0|radeon": pci 0000:01:00.0: [1002:6759] type 0 class 0x000300 pci 0000:01:00.0: reg 10: [mem 0xe0000000-0xefffffff 64bit pref] pci 0000:01:00.0: reg 18: [mem 0xf7e20000-0xf7e3ffff 64bit] pci 0000:01:00.0: reg 20: [io 0xe000-0xe0ff] pci 0000:01:00.0: reg 30: [mem 0xf7e00000-0xf7e1ffff pref] pci 0000:01:00.0: supports D1 D2 pci 0000:02:00.0: [1002:6719] type 0 class 0x000300 pci 0000:02:00.0: reg 10: [mem 0xd0000000-0xdfffffff 64bit pref] pci 0000:02:00.0: reg 18: [mem 0xf7d20000-0xf7d3ffff 64bit] pci 0000:02:00.0: reg 20: [io 0xd000-0xd0ff] pci 0000:02:00.0: reg 30: [mem 0xf7d00000-0xf7d1ffff pref] pci 0000:02:00.0: supports D1 D2 vgaarb: device added: PCI:0000:01:00.0,decodes=io+mem,owns=io+mem,locks=none vgaarb: device added: PCI:0000:02:00.0,decodes=io+mem,owns=none,locks=none vgaarb: bridge control possible 0000:02:00.0 vgaarb: bridge control possible 0000:01:00.0 pci 0000:01:00.0: Boot video device [drm] radeon kernel modesetting enabled. radeon 0000:01:00.0: setting latency timer to 64 radeon 0000:01:00.0: VRAM: 1024M 0x0000000000000000 - 0x000000003FFFFFFF (1024M used) radeon 0000:01:00.0: GTT: 512M 0x0000000040000000 - 0x000000005FFFFFFF [drm] radeon: 1024M of VRAM memory ready [drm] radeon: 512M of GTT memory ready. radeon 0000:01:00.0: irq 46 for MSI/MSI-X radeon 0000:01:00.0: radeon: using MSI. [drm] radeon: irq initialized. radeon 0000:01:00.0: WB enabled [drm] radeon: ib pool ready. [drm] radeon: power management initialized fbcon: radeondrmfb (fb0) is primary device fb0: radeondrmfb frame buffer device [drm] Initialized radeon 2.12.0 20080528 for 0000:01:00.0 on minor 0 radeon 0000:02:00.0: enabling device (0000 -> 0003) radeon 0000:02:00.0: setting latency timer to 64 radeon 0000:02:00.0: VRAM: 2048M 0x0000000000000000 - 0x000000007FFFFFFF (2048M used) radeon 0000:02:00.0: GTT: 512M 0x0000000080000000 - 0x000000009FFFFFFF [drm] radeon: 2048M of VRAM memory ready [drm] radeon: 512M of GTT memory ready. radeon 0000:02:00.0: irq 49 for MSI/MSI-X radeon 0000:02:00.0: radeon: using MSI. [drm] radeon: irq initialized. radeon 0000:02:00.0: WB enabled [drm] radeon: ib pool ready. [drm] radeon: power management initialized fb1: radeondrmfb frame buffer device [drm] Initialized radeon 2.12.0 20080528 for 0000:02:00.0 on minor 1 [drm] radeon: finishing device. radeon 0000:02:00.0: ffff88041a941800 unpin not necessary [drm] radeon: ttm finalized pci-stub 0000:02:00.0: claimed by stub pci-stub 0000:02:00.0: irq 49 for MSI/MSI-X This causes the Win7 VM to bluescreen on boot. How can I configure things so that the radeon module only attaches to the 6570 and not the 6950?

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  • Installing drivers for switchable graphics

    - by Anonymous
    I recently bought a laptop that came with Windows 7 64-bit installed. I have some older (16-bit and 32-bit) software that doesn't work with 64-bit Windows, but works just fine with 32-bit. Since I also wanted to get rid of all of the pre-installed spam, I decided to wipe the hard drive and install a fresh copy of Windows 7 32-bit. I can't get the graphics cards working. This laptop uses switchable graphics, an Intel card and a Radeon card. I first tried installing this driver from Intel, which works for the Intel card. Of course, the Radeon card doesn't work with this driver and I need it for some of the newer games I have. I also tried this driver. Windows's device manager will recognize the Radeon card, but it will still use the Intel card. Also, even though that package says it contains the Intel driver, the Intel card still isn't properly recognized by Windows (leaving me with a nasty 800x600 resolution). On top of that, the Catalyst Control Center won't open (saying "The Catalyst Control Center is not supported by the driver version of your enabled graphics adapter") I tried installing HP's driver then installing Intel's driver on top of it. Device manager will then recognize both graphics cards properly. However, the laptop still uses the Intel card. The CCC still won't start (saying the same thing as before) and I can't find any of 'switching' graphics cards. Before formatting, I could right-click the desktop and click "Configure Switchable Graphics" This option hasn't been in the context menu regardless of what driver(s) I've installed. After some research, I found out that this menu entry runs the command "cli.exe Start PowerXpressHybrid" I've tried manually running this command, but I get the same unsupported message from CCC. So, does anyone know how I can get this working? I would like to be able to switch between the Intel and Radeon. But, if there's some way to disable the Intel and use only the Radeon, that would be fine I dual-boot with Linux (framebuffer uses the Intel, haven't even tried getting X set up yet) Here's the output of lspci # lspci -v | grep VGA 00:02.0 VGA compatible controller: Intel Corporation 2nd Generation Core Processor Family Integrated Graphics Controller (rev 09) (prog-if 00 [VGA controller]) 01:00.0 VGA compatible controller: ATI Technologies Inc NI Seymour [AMD Radeon HD 6470M] (prog-if 00 [VGA controller]) The laptop is a HP Pavilion g6t-1d00. HP doesn't support installing anything but Windows 7 64-bit, so calling tech support isn't an option. Thanks for any help UPDATE: I finally got it working. After a fresh install of Windows 7, I installed the HP driver (the one linked above). Then, there's an optional Windows update I installed (don't remember the exact name, but it'll stick out). After that, graphics switching works just like it's supposed to. Moab, thanks anyways for your help

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  • How to change SMP affinity of an IRQ on Ubuntu domU inside Xen XCP?

    - by Alexander Gladysh
    I'd like to change IRQ SMP affinity for reasons, outlined in this question: CPU0 is swamped with eth1 interrupts But I can't — I see Input/output error when I try to write to /proc/irq/*/smp_affinity. Please point me to the HOWTO on the matter. (A formal reference on /proc/irq/*/ would be cool as well.) Gory details: Note that this is a VM inside an Ubuntu-based Xen XCP host. $ uname -a Linux MYHOST 2.6.38-15-virtual #59-Ubuntu SMP Fri Apr 27 16:40:18 UTC 2012 i686 i686 i386 GNU/Linux $ lsb_release -a No LSB modules are available. Distributor ID: Ubuntu Description: Ubuntu 11.04 Release: 11.04 Codename: natty $ sudo cat /proc/irq/*/smp_affinity 01 01 01 01 01 80 80 80 80 80 80 40 40 40 40 40 40 20 20 20 20 20 20 10 10 10 10 10 10 08 08 08 08 08 08 04 04 04 04 04 04 02 02 02 02 02 02 01 01 01 01 01 01 Update. The error details: $ N=$(grep -c processor /proc/cpuinfo) $ echo $N 8 $ printf %x $((2**N-1)) ff $ printf %x $((2**N-1)) | sudo tee /proc/irq/*/smp_affinity fftee: /proc/irq/288/smp_affinity: Input/output error tee: /proc/irq/289/smp_affinity: Input/output error tee: /proc/irq/290/smp_affinity: Input/output error tee: /proc/irq/291/smp_affinity: Input/output error tee: /proc/irq/292/smp_affinity: Input/output error tee: /proc/irq/293/smp_affinity: Input/output error tee: /proc/irq/294/smp_affinity: Input/output error tee: /proc/irq/295/smp_affinity: Input/output error tee: /proc/irq/296/smp_affinity: Input/output error tee: /proc/irq/297/smp_affinity: Input/output error tee: /proc/irq/298/smp_affinity: Input/output error tee: /proc/irq/299/smp_affinity: Input/output error tee: /proc/irq/300/smp_affinity: Input/output error tee: /proc/irq/301/smp_affinity: Input/output error tee: /proc/irq/302/smp_affinity: Input/output error tee: /proc/irq/303/smp_affinity: Input/output error tee: /proc/irq/304/smp_affinity: Input/output error tee: /proc/irq/305/smp_affinity: Input/output error tee: /proc/irq/306/smp_affinity: Input/output error tee: /proc/irq/307/smp_affinity: Input/output error tee: /proc/irq/308/smp_affinity: Input/output error tee: /proc/irq/309/smp_affinity: Input/output error tee: /proc/irq/310/smp_affinity: Input/output error tee: /proc/irq/311/smp_affinity: Input/output error tee: /proc/irq/312/smp_affinity: Input/output error tee: /proc/irq/313/smp_affinity: Input/output error tee: /proc/irq/314/smp_affinity: Input/output error tee: /proc/irq/315/smp_affinity: Input/output error tee: /proc/irq/316/smp_affinity: Input/output error tee: /proc/irq/317/smp_affinity: Input/output error tee: /proc/irq/318/smp_affinity: Input/output error tee: /proc/irq/319/smp_affinity: Input/output error tee: /proc/irq/320/smp_affinity: Input/output error tee: /proc/irq/321/smp_affinity: Input/output error tee: /proc/irq/322/smp_affinity: Input/output error tee: /proc/irq/323/smp_affinity: Input/output error tee: /proc/irq/324/smp_affinity: Input/output error tee: /proc/irq/325/smp_affinity: Input/output error tee: /proc/irq/326/smp_affinity: Input/output error tee: /proc/irq/327/smp_affinity: Input/output error tee: /proc/irq/328/smp_affinity: Input/output error tee: /proc/irq/329/smp_affinity: Input/output error tee: /proc/irq/330/smp_affinity: Input/output error tee: /proc/irq/331/smp_affinity: Input/output error tee: /proc/irq/332/smp_affinity: Input/output error tee: /proc/irq/333/smp_affinity: Input/output error tee: /proc/irq/334/smp_affinity: Input/output error tee: /proc/irq/335/smp_affinity: Input/output error Update. irqbalance is running: $ sudo service irqbalance status irqbalance start/running, process 560

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