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  • From Binary to Data Structures

    - by Cédric Menzi
    Table of Contents Introduction PE file format and COFF header COFF file header BaseCoffReader Byte4ByteCoffReader UnsafeCoffReader ManagedCoffReader Conclusion History This article is also available on CodeProject Introduction Sometimes, you want to parse well-formed binary data and bring it into your objects to do some dirty stuff with it. In the Windows world most data structures are stored in special binary format. Either we call a WinApi function or we want to read from special files like images, spool files, executables or may be the previously announced Outlook Personal Folders File. Most specifications for these files can be found on the MSDN Libarary: Open Specification In my example, we are going to get the COFF (Common Object File Format) file header from a PE (Portable Executable). The exact specification can be found here: PECOFF PE file format and COFF header Before we start we need to know how this file is formatted. The following figure shows an overview of the Microsoft PE executable format. Source: Microsoft Our goal is to get the PE header. As we can see, the image starts with a MS-DOS 2.0 header with is not important for us. From the documentation we can read "...After the MS DOS stub, at the file offset specified at offset 0x3c, is a 4-byte...". With this information we know our reader has to jump to location 0x3c and read the offset to the signature. The signature is always 4 bytes that ensures that the image is a PE file. The signature is: PE\0\0. To prove this we first seek to the offset 0x3c, read if the file consist the signature. So we need to declare some constants, because we do not want magic numbers.   private const int PeSignatureOffsetLocation = 0x3c; private const int PeSignatureSize = 4; private const string PeSignatureContent = "PE";   Then a method for moving the reader to the correct location to read the offset of signature. With this method we always move the underlining Stream of the BinaryReader to the start location of the PE signature.   private void SeekToPeSignature(BinaryReader br) { // seek to the offset for the PE signagure br.BaseStream.Seek(PeSignatureOffsetLocation, SeekOrigin.Begin); // read the offset int offsetToPeSig = br.ReadInt32(); // seek to the start of the PE signature br.BaseStream.Seek(offsetToPeSig, SeekOrigin.Begin); }   Now, we can check if it is a valid PE image by reading of the next 4 byte contains the content PE.   private bool IsValidPeSignature(BinaryReader br) { // read 4 bytes to get the PE signature byte[] peSigBytes = br.ReadBytes(PeSignatureSize); // convert it to a string and trim \0 at the end of the content string peContent = Encoding.Default.GetString(peSigBytes).TrimEnd('\0'); // check if PE is in the content return peContent.Equals(PeSignatureContent); }   With this basic functionality we have a good base reader class to try the different methods of parsing the COFF file header. COFF file header The COFF header has the following structure: Offset Size Field 0 2 Machine 2 2 NumberOfSections 4 4 TimeDateStamp 8 4 PointerToSymbolTable 12 4 NumberOfSymbols 16 2 SizeOfOptionalHeader 18 2 Characteristics If we translate this table to code, we get something like this:   [StructLayout(LayoutKind.Sequential, CharSet = CharSet.Unicode)] public struct CoffHeader { public MachineType Machine; public ushort NumberOfSections; public uint TimeDateStamp; public uint PointerToSymbolTable; public uint NumberOfSymbols; public ushort SizeOfOptionalHeader; public Characteristic Characteristics; } BaseCoffReader All readers do the same thing, so we go to the patterns library in our head and see that Strategy pattern or Template method pattern is sticked out in the bookshelf. I have decided to take the template method pattern in this case, because the Parse() should handle the IO for all implementations and the concrete parsing should done in its derived classes.   public CoffHeader Parse() { using (var br = new BinaryReader(File.Open(_fileName, FileMode.Open, FileAccess.Read, FileShare.Read))) { SeekToPeSignature(br); if (!IsValidPeSignature(br)) { throw new BadImageFormatException(); } return ParseInternal(br); } } protected abstract CoffHeader ParseInternal(BinaryReader br);   First we open the BinaryReader, seek to the PE signature then we check if it contains a valid PE signature and rest is done by the derived implementations. Byte4ByteCoffReader The first solution is using the BinaryReader. It is the general way to get the data. We only need to know which order, which data-type and its size. If we read byte for byte we could comment out the first line in the CoffHeader structure, because we have control about the order of the member assignment.   protected override CoffHeader ParseInternal(BinaryReader br) { CoffHeader coff = new CoffHeader(); coff.Machine = (MachineType)br.ReadInt16(); coff.NumberOfSections = (ushort)br.ReadInt16(); coff.TimeDateStamp = br.ReadUInt32(); coff.PointerToSymbolTable = br.ReadUInt32(); coff.NumberOfSymbols = br.ReadUInt32(); coff.SizeOfOptionalHeader = (ushort)br.ReadInt16(); coff.Characteristics = (Characteristic)br.ReadInt16(); return coff; }   If the structure is as short as the COFF header here and the specification will never changed, there is probably no reason to change the strategy. But if a data-type will be changed, a new member will be added or ordering of member will be changed the maintenance costs of this method are very high. UnsafeCoffReader Another way to bring the data into this structure is using a "magically" unsafe trick. As above, we know the layout and order of the data structure. Now, we need the StructLayout attribute, because we have to ensure that the .NET Runtime allocates the structure in the same order as it is specified in the source code. We also need to enable "Allow unsafe code (/unsafe)" in the project's build properties. Then we need to add the following constructor to the CoffHeader structure.   [StructLayout(LayoutKind.Sequential, CharSet = CharSet.Unicode)] public struct CoffHeader { public CoffHeader(byte[] data) { unsafe { fixed (byte* packet = &data[0]) { this = *(CoffHeader*)packet; } } } }   The "magic" trick is in the statement: this = *(CoffHeader*)packet;. What happens here? We have a fixed size of data somewhere in the memory and because a struct in C# is a value-type, the assignment operator = copies the whole data of the structure and not only the reference. To fill the structure with data, we need to pass the data as bytes into the CoffHeader structure. This can be achieved by reading the exact size of the structure from the PE file.   protected override CoffHeader ParseInternal(BinaryReader br) { return new CoffHeader(br.ReadBytes(Marshal.SizeOf(typeof(CoffHeader)))); }   This solution is the fastest way to parse the data and bring it into the structure, but it is unsafe and it could introduce some security and stability risks. ManagedCoffReader In this solution we are using the same approach of the structure assignment as above. But we need to replace the unsafe part in the constructor with the following managed part:   [StructLayout(LayoutKind.Sequential, CharSet = CharSet.Unicode)] public struct CoffHeader { public CoffHeader(byte[] data) { IntPtr coffPtr = IntPtr.Zero; try { int size = Marshal.SizeOf(typeof(CoffHeader)); coffPtr = Marshal.AllocHGlobal(size); Marshal.Copy(data, 0, coffPtr, size); this = (CoffHeader)Marshal.PtrToStructure(coffPtr, typeof(CoffHeader)); } finally { Marshal.FreeHGlobal(coffPtr); } } }     Conclusion We saw that we can parse well-formed binary data to our data structures using different approaches. The first is probably the clearest way, because we know each member and its size and ordering and we have control about the reading the data for each member. But if add member or the structure is going change by some reason, we need to change the reader. The two other solutions use the approach of the structure assignment. In the unsafe implementation we need to compile the project with the /unsafe option. We increase the performance, but we get some security risks.

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  • unstripped binary or object creating debian package

    - by Jaime
    I'm new to package creation and I'm trying to create a .deb package and keep getting 'unstripped-binary-or-object' on all my libraries and executables. I have everything setup in the directory tree where I want them to end up (and a DEBIAN folder with the control file) and then do fakeroot dpkg-deb --build ./mypackage when I lint with lintian mypackage.deb I get that error. Any ideas or suggestions? Thanks

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  • How to write a recursive function that returns a linked list of nodes, when given a binary tree of n

    - by Jian Lin
    I was once asked of this in an interview: How to write a recursive function that returns a linked list of nodes, when given a binary tree of nodes? (flattening the data) For some reason, I tend to need more than 3 to 5 minutes to solve any recursive problem. Usually, 15 to 20 minutes will be more like it. How could we attack this problem, such as a very systematic way of reaching a solution, so that they can be solved in 3 to 5 minute time frame?

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  • How do I convert decimal numbers to binary in Perl?

    - by David
    I am trying to make a program that converts decimal numbers or text into binary numbers in perl. The program asks for user input of a character or string , and then prints out the result to the console. How do I do this? My code I have been working on is below, but i cannot seem to fix it. print "Enter a number to convert: "; chomp($decimal = <STDIN>); print "\nConverting $number to binary...\n"; $remainder = $decimal%2; while($decimal > 0) { $decimal/2; print $remainder; }

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  • How to fetch the data from binary log file and insert in our desired table in MySQL?

    - by Parth
    How to fetch the data from binary log file and insert in our desired table in MySQL? I am on my way of scripting a PHP code for Audit Trail, in this I encountered a situation that if there will be new table created then I will not be available with triggers for that new table and hence no tracking could be done for that, so if I code it to create three new triggers for this new table, then how will get the last change done in this table? Hence I found that Binary Log File can be helpfull for me in this case, to fetch the last change for this new table and insert it in tracking table... BUT HOW????

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  • Invalid binary. A pre-release beta version of the SDK was used to build the application.

    - by erik
    Yesterday I submitted an app to the iphone dev center, no problems at all. Today I did some changes to another existing app and was greeted by the following message when I uploaded my binary: The binary you uploaded was invalid. A pre-release beta version of the SDK was used to build the application. I googled the message and didn't find anything at all. I also tried but failed to update another app, same message there. I have not changed anything in between (that I know) and I have certainly not installed or downgraded my SDK. Building for iPhone 3.0..

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  • What language is to binary, as Perl is to text?

    - by ehdr
    I am looking for a scripting (or higher level programming) language (or e.g. modules for Python or similar languages) for effortlessly analyzing and manipulating binary data in files (e.g. core dumps), much like Perl allows manipulating text files very smoothly. Things I want to do include presenting arbitrary chunks of the data in various forms (binary, decimal, hex), convert data from one endianess to another, etc. That is, things you normally would use C or assembly for, but I'm looking for a language which allows for writing tiny pieces of code for highly specific, one-time purposes very quickly. Any suggestions?

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  • What's the big difference between those two binary files?

    - by Lela Dax
    These are two files (contained in the tar.bz2) that were generated using a just-in-time compiler for a game engine. The generated code from ui-linux.bin is from a x86_64 gcc compiler and the ui-windows.bin from the same brand of compiler but targetting win x86_64 (mingw-w64). I've attempted to debug a problem that occurs only on the windows version and i stumbled upon what it seems to be different end-binary code. However, the input assembly code was virtually identical (only difference being pointer representations as int). (there's theoretically no winabi/unixabi conflict since that's taken care of by an attribute flag on certain declarations involved). Any idea what it might be that makes these two binary codes different? The C for the mini-compiler and base assembly producing it appears compatible at first glance. http://www0.org/vm/bins.tar.bz2

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  • How can I detect if a file is binary (non-text) in python?

    - by grieve
    How can I tell if a file is binary (non-text) in python? I am searching through a large set of files in python, and keep getting matches in binary files. This makes the output look incredibly messy. I know I could use grep -I, but I am doing more with the data than what grep allows for. In the past I would have just searched for characters greater than 0x7f, but utf8 and the like make that impossible on modern systems. Ideally the solution would be fast, but any solution will do.

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  • how to display a binary content of image/pdf in java script?

    - by Ka-rocks
    I have a binary content of image/pdf in java script variable downloaded from server. There will be indication server about the typr of the file. I have to display the content in respective file format. If it is image , i have to display the image. If it is a pdf, i have to open the content in pdf format. and so on. How to parse the binary content and display it? I have searched for it. But I couldn't find exact solution. I'm using jquery mobile framework. Pls help..

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  • Would you store binary data in database or in file system?

    - by paul
    This is a question which has been asked before (large-text-and-images-in-sql) but mainly for data which will be changed. In my case the data will be stored and never changed. Just seems sensible to keep everything together. Are there any reasons why I should not store static binary data in a database? Assuming it is a sensible thing to do, are there any advantages to storing such data in separate tables? (You might begin to realise now that I'm not a DB expert...) Clarify: There will probably be no more than 10-20 users but these will be in the US and in the UK. The binary data will have to be transfered in any case.

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  • Tree position terminology/naming

    - by wst
    This is a naming things question. I am processing trees (XML documents), and there are often special rules applied to nodes based on structure. It's been very difficult coming up with concise naming conventions for some cases, namely for nodes in the first position among their siblings, along with some recursive relationship: Given an arbitrary node, I want to describe its first child, and then that node's first child, and so on recursively. Given another arbitrary node, I want to describe its parent if the parent is first among its siblings, and that parent's parent if it's first, and so on recursively. Is there existing terminology to describe these tree positions? How would you name a variable or function that captures one of these cases so that it's intuitive to an unfamiliar developer trying to understand an algorithm?

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  • Error: cluster_port_ready: could not find psql binary

    - by Christoffer D. Brammer
    When I use apt-get install i get the error: Error: cluster_port_ready: could not find psql binary What do I do here? I have tried to remove PostgreSQL 8.2 but it gives this error: The following packages have unmet dependencies: postgresql-8.2: Depends: libkrb53 (>= 1.6.dfsg.1) but it is not installable Depends: postgresql-client-8.2 but it is not installable E: Unmet dependencies. Try 'apt-get -f install' with no packages (or specify a solution). And then I end up at the start, with the error when trying apt-get -f install. /Christoffer

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  • Error when running binary with root setuid under encrypted home directory

    - by carestad
    I'm using a VPN script for Juniper's Secure Access protocol form here, which executes a binary located under ~/.juniper_networks/network_connect/ncsvc with the following permissions: -rws--s--x 1 root root 1225424 okt. 25 13:54 ncsvc But when I do, I get the following error: ncsvc> Failed to setuid to root. Error 1: Operation not permitted Moving/copying the ~/.juniper_networks folder to e.g. /opt/juniper (with the same owner permissions), I don't get the error. In the forum thread at Ubuntuforums someone pointed out that it's probably because I have encrypted my /home and thus a "problem" with ecryptfs. How can I fix this?

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  • Computer Arithmetic - Binary for Decimal Numbers

    - by MarkPearl
    This may be of use to someone else doing this course… The Problem In the section on Computer Arithmetic it gives an example of converting -7.6875 to IEEE floating point format. I understand all the steps except for the first one, where it does the following... 7.6875 (base 10) = 111.1011 (base 2) I don't understand the conversion - I realize that 111 (base 2) = 7 (base 10), but how does the .6875 part relate to the .1011? Or am I totally off track with this? The Solution The fractional part of the decimal to binary conversion is done as follows: 0.6875 x 2 = 1.375 = 0.375 + 1 (Keep the 1 separate) 0.375 x 2   = 0.75   = 0.75    + 0 0.75 x 2    = 1.5      = 0.5      + 1 0.5 x 2     = 1.0       = 0.0       + 1 The bit pattern of 0s and 1s on the right-hand side gives you the fractional part. So 0.6875 (base 10) = .1011 (Base 2) See also Stallings, chapter 19.

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  • Installing 64bit Java 7 - Cannot Execute Binary File

    - by warpstack
    So I downloaded the latest version of Java from Oracle so I could get a 64bit JVM on Ubuntu Server 10.10. After extracting the file and updating the alternatives I went to check my installation by running java -version and I get this error: -bash: /usr/bin/java: cannot execute binary file I'm at a loss for what to do here. My alternatives menu looks like this: Selection Path Priority Status ------------------------------------------------------------ 0 /usr/lib/jvm/java-6-openjdk/jre/bin/java 1061 auto mode 1 /usr/lib/jvm/java-6-openjdk/jre/bin/java 1061 manual mode 2 /usr/lib/jvm/java-7-openjdk-i386/jre/bin/java 1051 manual mode * 3 /usr/lib/jvm/jdk1.7.0/bin/java 3 manual mode After restarting the system I seem to be getting a totally new error when checking the java version. usr/bin/java: 1: Syntax error: end of file unexpected (expecting ")")

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  • Algorithm for perfect non-binary graph layout

    - by mariki
    I have a complex non-binary graph model. Each tree node can have multiple children&parents (a node can also have a connection to it's "brother"). A node is represented as square on screen with lines to the connected nodes. For that I want to use Draw2D and GEF libraries. The problem I am facing is the graph layout. I need a nice algorithm that can reposition the square nodes and the connections with minimum intersections and also make it symmetric as possible.

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  • How can I open binary image files? (.img)

    - by Simon Cahill
    I'm a Windows/Mac/Ubuntu and Androoid user, so I know what I'm talking about, when I say: How do I open binary image files? (.img) They just won't open, on any OS... I'm an Android dev... I'm currently working on a ROM, (I also program, using Windows) but I need to extract files, from .img files. I've converted them to .ext4.img but they just aren't recognized by Linux (Definitly not by Android), by Mac OS or Windows. In other words, I can't open, extract or mount them. Can anyone help me? I'm kinda confused...

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  • SQL binary value to PHP variable leading zeros

    - by Agony
    Using sql query to pull data from a mssql database results in a value that still has leading zeros. The data in database is stored as binary(13) - so it will pull all 13 digits. However the value is a text, so any leading zeros will generally show up as '?' in a form on the site - and in return will update wrong data to the database later. So what i need is to only select/display the text itself, not all 13 bytes. using: SELECT CONVERT(char,uilock_pw) AS uipwd FROM tbl_UserAccount or SELECT uilock_pw FROM tbl_UserAccount still adds the leading zeros to the char array. Example in database: 0x71776531323300000000000000 Would show up as: qwe123??????? But should be: qwe123 Im not even sure what character those ? represent. Using Echo results in a normal qwe123 - but not in a form.

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  • Unable to execute binary file. Exec format error

    - by user2689020
    I recently heard about Breach, a Node.js based browser. I was following the instructions on http://codeforgeek.com/2014/08/download-install-breach-browser-ubuntu-14-04/ to install it but got the following error : breach-v0.3.22-alpha.6-linux-x64/__AUTO_UPDATE_BUNDLE__/exo_browser/exo_browser: cannot execute binary file: Exec format error After some googling, I found that it is because I am trying to install the 64 bit package on the 32 bit Ubuntu installation. I tried to find 32 bit package of the same but ended up with no luck. The browser is only available in 64 bit packet(as far as i know). So, My question is : Is it possible to somehow install it on the 32 bit OS or if any program available which can run 64 bit applications on the 32 bit OS. I have been googling around and found no help. Can anyone help me? I am using Ubuntu 14.04 (32 Bit). Thank You

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