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  • Combinatorial optimisation of a distance metric

    - by Jose
    I have a set of trajectories, made up of points along the trajectory, and with the coordinates associated with each point. I store these in a 3d array ( trajectory, point, param). I want to find the set of r trajectories that have the maximum accumulated distance between the possible pairwise combinations of these trajectories. My first attempt, which I think is working looks like this: max_dist = 0 for h in itertools.combinations ( xrange(num_traj), r): for (m,l) in itertools.combinations (h, 2): accum = 0. for ( i, j ) in itertools.izip ( range(k), range(k) ): A = [ (my_mat[m, i, z] - my_mat[l, j, z])**2 \ for z in xrange(k) ] A = numpy.array( numpy.sqrt (A) ).sum() accum += A if max_dist < accum: selected_trajectories = h This takes forever, as num_traj can be around 500-1000, and r can be around 5-20. k is arbitrary, but can typically be up to 50. Trying to be super-clever, I have put everything into two nested list comprehensions, making heavy use of itertools: chunk = [[ numpy.sqrt((my_mat[m, i, :] - my_mat[l, j, :])**2).sum() \ for ((m,l),i,j) in \ itertools.product ( itertools.combinations(h,2), range(k), range(k)) ]\ for h in itertools.combinations(range(num_traj), r) ] Apart from being quite unreadable (!!!), it is also taking a long time. Can anyone suggest any ways to improve on this?

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  • Designing a Tag table that tells how many times it's used

    - by Satoru.Logic
    Hi, all. I am trying to design a tagging system with a model like this: Tag: content = CharField creator = ForeignKey used = IntergerField It is a many-to-many relationship between tags and what's been tagged. Everytime I insert a record into the assotication table, Tag.used is incremented by one, and decremented by one in case of deletion. Tag.used is maintained because I want to speed up answering the question 'How many times this tag is used?'. However, this seems to slow insertion down obviously. Please tell me how to improve this design. Thanks in advance.

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  • How to turn a list of tuples into a string?

    - by matt
    I have a list of tuples that I'm trying to incorporate into a SQL query but I can't figure out how to join them together without adding slashes. My like this: list = [('val', 'val'), ('val', 'val'), ('val', 'val')] If I turn each tuple into a string and try to join them with a a comma I'll get something like ' (\'val\, \'val\'), ... ' What's the right way to do this, so I can get the list (without brackets) as a string?

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  • Error -3 while decompressing data: incorrect header check

    - by Rahul99
    I have .zip file which contain csv data. I am reading .zip file using <input type = "file" name = "select_file"/> I want to decompress that .zip file and read csv data. file_data = self.request.get('select_file') file_str = zlib.decompress(file_data) #file_data_list = file_str.split('\n') #file_Reader = csv.reader(file_data_list,quoting=csv.QUOTE_NONE ) I am expecting csv data in file_str but I am getting error. error :: Error -3 while decompressing data: incorrect header check What I have to use?

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  • Why is win32com so much slower than xlrd?

    - by Josh
    I have the same code, written using win32com and xlrd. xlrd preforms the algorithm in less than a second, while win32com takes minutes. Here is the win32com: def makeDict(ws): """makes dict with key as header name, value as tuple of column begin and column end (inclusive)""" wsHeaders = {} # key is header name, value is column begin and end inclusive for cnum in xrange(9, find_last_col(ws)): if ws.Cells(7, cnum).Value: wsHeaders[str(ws.Cells(7, cnum).Value)] = (cnum, find_last_col(ws)) for cend in xrange(cnum + 1, find_last_col(ws)): #finds end column if ws.Cells(7, cend).Value: wsHeaders[str(ws.Cells(7, cnum).Value)] = (cnum, cend - 1) break return wsHeaders And the xlrd def makeDict(ws): """makes dict with key as header name, value as tuple of column begin and column end (inclusive)""" wsHeaders = {} # key is header name, value is column begin and end inclusive for cnum in xrange(8, ws.ncols): if ws.cell_value(6, cnum): wsHeaders[str(ws.cell_value(6, cnum))] = (cnum, ws.ncols) for cend in xrange(cnum + 1, ws.ncols):#finds end column if ws.cell_value(6, cend): wsHeaders[str(ws.cell_value(6, cnum))] = (cnum, cend - 1) break return wsHeaders

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  • Scrapy Not Returning Additonal Info from Scraped Link in Item via Request Callback

    - by zoonosis
    Basically the code below scrapes the first 5 items of a table. One of the fields is another href and clicking on that href provides more info which I want to collect and add to the original item. So parse is supposed to pass the semi populated item to parse_next_page which then scrapes the next bit and should return the completed item back to parse Running the code below only returns the info collected in parse If I change the return items to return request I get a completed item with all 3 "things" but I only get 1 of the rows, not all 5. Im sure its something simple, I just can't see it. class ThingSpider(BaseSpider): name = "thing" allowed_domains = ["somepage.com"] start_urls = [ "http://www.somepage.com" ] def parse(self, response): hxs = HtmlXPathSelector(response) items = [] for x in range (1,6): item = ScrapyItem() str_selector = '//tr[@name="row{0}"]'.format(x) item['thing1'] = hxs.select(str_selector")]/a/text()').extract() item['thing2'] = hxs.select(str_selector")]/a/@href').extract() print 'hello' request = Request("www.nextpage.com", callback=self.parse_next_page,meta={'item':item}) print 'hello2' request.meta['item'] = item items.append(item) return items def parse_next_page(self, response): print 'stuff' hxs = HtmlXPathSelector(response) item = response.meta['item'] item['thing3'] = hxs.select('//div/ul/li[1]/span[2]/text()').extract() return item

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  • Writing good tests for Django applications

    - by Ludwik Trammer
    I've never written any tests in my life, but I'd like to start writing tests for my Django projects. I've read some articles about tests and decided to try to write some tests for an extremely simple Django app or a start. The app has two views (a list view, and a detail view) and a model with four fields: class News(models.Model): title = models.CharField(max_length=250) content = models.TextField() pub_date = models.DateTimeField(default=datetime.datetime.now) slug = models.SlugField(unique=True) I would like to show you my tests.py file and ask: Does it make sense? Am I even testing for the right things? Are there best practices I'm not following, and you could point me to? my tests.py (it contains 11 tests): # -*- coding: utf-8 -*- from django.test import TestCase from django.test.client import Client from django.core.urlresolvers import reverse import datetime from someproject.myapp.models import News class viewTest(TestCase): def setUp(self): self.test_title = u'Test title: bareksc' self.test_content = u'This is a content 156' self.test_slug = u'test-title-bareksc' self.test_pub_date = datetime.datetime.today() self.test_item = News.objects.create( title=self.test_title, content=self.test_content, slug=self.test_slug, pub_date=self.test_pub_date, ) client = Client() self.response_detail = client.get(self.test_item.get_absolute_url()) self.response_index = client.get(reverse('the-list-view')) def test_detail_status_code(self): """ HTTP status code for the detail view """ self.failUnlessEqual(self.response_detail.status_code, 200) def test_list_status_code(self): """ HTTP status code for the list view """ self.failUnlessEqual(self.response_index.status_code, 200) def test_list_numer_of_items(self): self.failUnlessEqual(len(self.response_index.context['object_list']), 1) def test_detail_title(self): self.failUnlessEqual(self.response_detail.context['object'].title, self.test_title) def test_list_title(self): self.failUnlessEqual(self.response_index.context['object_list'][0].title, self.test_title) def test_detail_content(self): self.failUnlessEqual(self.response_detail.context['object'].content, self.test_content) def test_list_content(self): self.failUnlessEqual(self.response_index.context['object_list'][0].content, self.test_content) def test_detail_slug(self): self.failUnlessEqual(self.response_detail.context['object'].slug, self.test_slug) def test_list_slug(self): self.failUnlessEqual(self.response_index.context['object_list'][0].slug, self.test_slug) def test_detail_template(self): self.assertContains(self.response_detail, self.test_title) self.assertContains(self.response_detail, self.test_content) def test_list_template(self): self.assertContains(self.response_index, self.test_title)

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  • Which webserver to use with bottle?

    - by luc
    Bottle can use several webservers: Build-in HTTP development server and support for paste, fapws3, flup, cherrypy or any other WSGI capable server. I am using bottle for a desktop-app and I guess that the development server is enough in this case. I would like to know if some of you have experience with one of the alternative server. Which server for which purpose? Thanks in advance

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  • How can I display multiple django modelformset forms together?

    - by JT
    I have a problem with needing to provide multiple model backed forms on the same page. I understand how to do this with single forms, i.e. just create both the forms call them something different then use the appropriate names in the template. Now how exactly do you expand that solution to work with modelformsets? The wrinkle, of course, is that each 'form' must be rendered together in the appropriate fieldset. For example I want my template to produce something like this: <fieldset> <label for="id_base-0-desc">Home Base Description:</label> <input id="id_base-0-desc" type="text" name="base-0-desc" maxlength="100" /> <label for="id_likes-0-icecream">Want ice cream?</label> <input type="checkbox" name="likes-0-icecream" id="id_likes-0-icecream" /> </fieldset> <fieldset> <label for="id_base-1-desc">Home Base Description:</label> <input id="id_base-1-desc" type="text" name="base-1-desc" maxlength="100" /> <label for="id_likes-1-icecream">Want ice cream?</label> <input type="checkbox" name="likes-1-icecream" id="id_likes-1-icecream" /> </fieldset> I am using a loop like this to process the results for base_form, likes_form in map(None, base_forms, likes_forms): which works as I'd expect (I'm using map because the # of forms can be different). The problem is that I can't figure out a way to do the same thing with the templating engine. The system does work if I layout all the base models together then all the likes models after wards, but it doesn't meet the layout requirements.

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  • verbose_name for a model's method

    - by mawimawi
    How can I set a verbose_name for a model's method, so that it might be displayed in the admin's change_view form? example: class Article(models.Model): title = models.CharField(max_length=64) created_date = models.DateTimeField(....) def created_weekday(self): return self.created_date.strftime("%A") in admin.py: class ArticleAdmin(admin.ModelAdmin): readonly_fields = ('created_weekday',) fields = ('title', 'created_weekday') Now the label for created_weekday is "Created Weekday", but I'd like it to have a different label which should be i18nable using ugettext_lazy as well. I've tried created_weekday.verbose_name=... after the method, but that did not show any result. Is there a decorator or something I can use, so I could make my own "verbose_name" / "label" / whateverthename is?

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  • Loading url with cyrillic symbols

    - by Ockonal
    Hi guys, I have to load some url with cyrillic symbols. My script should work with this: http://wincode.org/%D0%BF%D1%80%D0%BE%D0%B3%D1%80%D0%B0%D0%BC%D0%BC%D0%B8%D1%80%D0%BE%D0%B2%D0%B0%D0%BD%D0%B8%D0%B5/ If I'll use this in browser it would replaced into normal symbols, but urllib code fails with 404 error. How to decode correctly this url? When I'm using that url directly in code, like address = 'that address', it works perfect. But I used parsing page for getting this url. I have a list of urls which contents cyrillic. Maybe they have uncorrect encoding? Here is more code: requestData = urllib2.Request( %SOME_ADDRESS%, None, {"User-Agent": user_agent}) requestHandler = pageHandler.open(requestData) pageData = requestHandler.read().decode('utf-8') soupHandler = BeautifulSoup(pageData) topicLinks = [] for postBlock in soupHandler.findAll('a', href=re.compile('%SOME_REGEXP%')): topicLinks.append(postBlock['href']) postAddress = choice(topicLinks) postRequestData = urllib2.Request(postAddress, None, {"User-Agent": user_agent}) postHandler = pageHandler.open(postRequestData) postData = postHandler.read() File "/usr/lib/python2.6/urllib2.py", line 518, in http_error_default raise HTTPError(req.get_full_url(), code, msg, hdrs, fp) urllib2.HTTPError: HTTP Error 404: Not Found

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  • Huge amount of time sending data with suds and proxy

    - by Roman
    Hi everyone, I have the following code to send data through a proxy using suds: import suds t = suds.transport.http.HttpTransport() proxy = urllib2.ProxyHandler({'http': 'http://192.168.3.217:3128'}) opener = urllib2.build_opener(proxy) t.urlopener = opener ws = suds.client.Client('http://xxxxxxx/web.asmx?WSDL', transport=t) req = ws.factory.create('ActionRequest.request') req.SerialNumber = 'asdf' req.HostName = 'hola' res = ws.service.ActionRequest(req) I don't know why, but it can be sending data above 2 or 3 minutes, or even more and it raises a "Gateway timeout" exception sometimes. If I don't use the proxy, the amount of time used is above 2 seconds or less. Here is the SOAP reply: (ActionResponse){ Id = None Action = "Action.None" Objects = "" } The proxy is running right with other requests through urllib2, or using normal web browsers like firefox. Does anyone have any idea what's happening here with suds? Thanks a lot in advance!!!

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  • How can I detect whether an image is a PNG or APNG format?

    - by perlit
    APNG is backwards compatible with PNG. I opened up an apng and png file in a hex editor and the first few bytes look identical. So if a user uploads either of these formats, how do I detect what the format really is? I've seen this done on some sites that block apng. I'm guessing the ImageMagick library makes this easy, but what if I were to do the detect without the use of an image processing library (for learning purposes)? Can I look for specific bytes that tell me if the file is apng? Solutions in any language is welcome.

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  • Find subset with K elements that are closest to eachother

    - by Nima
    Given an array of integers size N, how can you efficiently find a subset of size K with elements that are closest to each other? Let the closeness for a subset (x1,x2,x3,..xk) be defined as: 2 <= N <= 10^5 2 <= K <= N constraints: Array may contain duplicates and is not guaranteed to be sorted. My brute force solution is very slow for large N, and it doesn't check if there's more than 1 solution: N = input() K = input() assert 2 <= N <= 10**5 assert 2 <= K <= N a = [] for i in xrange(0, N): a.append(input()) a.sort() minimum = sys.maxint startindex = 0 for i in xrange(0,N-K+1): last = i + K tmp = 0 for j in xrange(i, last): for l in xrange(j+1, last): tmp += abs(a[j]-a[l]) if(tmp > minimum): break if(tmp < minimum): minimum = tmp startindex = i #end index = startindex + K? Examples: N = 7 K = 3 array = [10,100,300,200,1000,20,30] result = [10,20,30] N = 10 K = 4 array = [1,2,3,4,10,20,30,40,100,200] result = [1,2,3,4]

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  • Can SQLAlchemy DateTime Objects Only Be Naive?

    - by Sean M
    I am working with SQLAlchemy, and I'm not yet sure which database I'll use under it, so I want to remain as DB-agnostic as possible. How can I store a timezone-aware datetime object in the DB without tying myself to a specific database? Right now, I'm making sure that times are UTC before I store them in the DB, and converting to localized at display-time, but that feels inelegant and brittle. Is there a DB-agnostic way to get a timezone-aware datetime out of SQLAlchemy instead of getting naive datatime objects out of the DB?

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  • Serve external template in Django

    - by AlexeyMK
    Hey, I want to do something like return render_to_response("http://docs.google.com/View?id=bla", args) and serve an external page with django arguments. Django doesn't like this (it looks for templates in very particular places). What's the easiest way make this work? Right now I'm thinking to use urllib to save the page to somewhere locally on my server and then serve with the templates pointing to there. Note: I'm not looking for anything particularly scalable here, I realize my proposal above is a little dirty.

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  • How do I launch background jobs w/ paramiko?

    - by sophacles
    Here is my scenario: I am trying to automate some tasks using Paramiko. The tasks need to be started in this order (using the notation (host, task)): (A, 1), (B, 2), (C, 2), (A,3), (B,3) -- essentially starting servers and clients for some testing in the correct order. Further, because in the tests networking may get mucked up, and because I need some of the output from the tests, I would like to just redirect output to a file. In similar scenarios the common response is to use 'screen -m -d' or to use 'nohup'. However with paramiko's exec_cmd, nohup doesn't actually exit. Using: bash -c -l nohup test_cmd & doesnt work either, exec_cmd still blocks to process end. In the screen case, output redirection doesn't work very well, (actually, doesnt work at all the best I can figure out). So, after all that explanation, my question is: is there an easy elegant way to detach processes and capture output in such a way as to end paramiko's exec_cmd blocking? Update The dtach command works nicely for this!

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  • How to add a context processor from a Django app

    - by Edan Maor
    Say I'm writing a Django app, and all the templates in the app require a certain variable. The "classic" way to deal with this, afaik, is to write a context processor and add it to TEMPLATE_CONTEXT_PROCESSORS in the settings.py. My question is, is this the right way to do it, considering that apps are supposed to be "independent" from the actual project using them? In other words, when deploying that app to a new project, is there any way to avoid the project having to explicitly mess around with its settings?

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  • How do I code this relationship in SQLAlchemy?

    - by Martin Del Vecchio
    I am new to SQLAlchemy (and SQL, for that matter). I can't figure out how to code the idea I have in my head. I am creating a database of performance-test results. A test run consists of a test type and a number (this is class TestRun below) A test suite consists the version string of the software being tested, and one or more TestRun objects (this is class TestSuite below). A test version consists of all test suites with the given version name. Here is my code, as simple as I can make it: from sqlalchemy import * from sqlalchemy.ext.declarative import declarative_base from sqlalchemy.orm import relationship, backref, sessionmaker Base = declarative_base() class TestVersion (Base): __tablename__ = 'versions' id = Column (Integer, primary_key=True) version_name = Column (String) def __init__ (self, version_name): self.version_name = version_name class TestRun (Base): __tablename__ = 'runs' id = Column (Integer, primary_key=True) suite_directory = Column (String, ForeignKey ('suites.directory')) suite = relationship ('TestSuite', backref=backref ('runs', order_by=id)) test_type = Column (String) rate = Column (Integer) def __init__ (self, test_type, rate): self.test_type = test_type self.rate = rate class TestSuite (Base): __tablename__ = 'suites' directory = Column (String, primary_key=True) version_id = Column (Integer, ForeignKey ('versions.id')) version_ref = relationship ('TestVersion', backref=backref ('suites', order_by=directory)) version_name = Column (String) def __init__ (self, directory, version_name): self.directory = directory self.version_name = version_name # Create a v1.0 suite suite1 = TestSuite ('dir1', 'v1.0') suite1.runs.append (TestRun ('test1', 100)) suite1.runs.append (TestRun ('test2', 200)) # Create a another v1.0 suite suite2 = TestSuite ('dir2', 'v1.0') suite2.runs.append (TestRun ('test1', 101)) suite2.runs.append (TestRun ('test2', 201)) # Create another suite suite3 = TestSuite ('dir3', 'v2.0') suite3.runs.append (TestRun ('test1', 102)) suite3.runs.append (TestRun ('test2', 202)) # Create the in-memory database engine = create_engine ('sqlite://') Session = sessionmaker (bind=engine) session = Session() Base.metadata.create_all (engine) # Add the suites in version1 = TestVersion (suite1.version_name) version1.suites.append (suite1) session.add (suite1) version2 = TestVersion (suite2.version_name) version2.suites.append (suite2) session.add (suite2) version3 = TestVersion (suite3.version_name) version3.suites.append (suite3) session.add (suite3) session.commit() # Query the suites for suite in session.query (TestSuite).order_by (TestSuite.directory): print "\nSuite directory %s, version %s has %d test runs:" % (suite.directory, suite.version_name, len (suite.runs)) for run in suite.runs: print " Test '%s', result %d" % (run.test_type, run.rate) # Query the versions for version in session.query (TestVersion).order_by (TestVersion.version_name): print "\nVersion %s has %d test suites:" % (version.version_name, len (version.suites)) for suite in version.suites: print " Suite directory %s, version %s has %d test runs:" % (suite.directory, suite.version_name, len (suite.runs)) for run in suite.runs: print " Test '%s', result %d" % (run.test_type, run.rate) The output of this program: Suite directory dir1, version v1.0 has 2 test runs: Test 'test1', result 100 Test 'test2', result 200 Suite directory dir2, version v1.0 has 2 test runs: Test 'test1', result 101 Test 'test2', result 201 Suite directory dir3, version v2.0 has 2 test runs: Test 'test1', result 102 Test 'test2', result 202 Version v1.0 has 1 test suites: Suite directory dir1, version v1.0 has 2 test runs: Test 'test1', result 100 Test 'test2', result 200 Version v1.0 has 1 test suites: Suite directory dir2, version v1.0 has 2 test runs: Test 'test1', result 101 Test 'test2', result 201 Version v2.0 has 1 test suites: Suite directory dir3, version v2.0 has 2 test runs: Test 'test1', result 102 Test 'test2', result 202 This is not correct, since there are two TestVersion objects with the name 'v1.0'. I hacked my way around this by adding a private list of TestVersion objects, and a function to find a matching one: versions = [] def find_or_create_version (version_name): # Find existing for version in versions: if version.version_name == version_name: return (version) # Create new version = TestVersion (version_name) versions.append (version) return (version) Then I modified my code that adds the records to use it: # Add the suites in version1 = find_or_create_version (suite1.version_name) version1.suites.append (suite1) session.add (suite1) version2 = find_or_create_version (suite2.version_name) version2.suites.append (suite2) session.add (suite2) version3 = find_or_create_version (suite3.version_name) version3.suites.append (suite3) session.add (suite3) Now the output is what I want: Suite directory dir1, version v1.0 has 2 test runs: Test 'test1', result 100 Test 'test2', result 200 Suite directory dir2, version v1.0 has 2 test runs: Test 'test1', result 101 Test 'test2', result 201 Suite directory dir3, version v2.0 has 2 test runs: Test 'test1', result 102 Test 'test2', result 202 Version v1.0 has 2 test suites: Suite directory dir1, version v1.0 has 2 test runs: Test 'test1', result 100 Test 'test2', result 200 Suite directory dir2, version v1.0 has 2 test runs: Test 'test1', result 101 Test 'test2', result 201 Version v2.0 has 1 test suites: Suite directory dir3, version v2.0 has 2 test runs: Test 'test1', result 102 Test 'test2', result 202 This feels wrong to me; it doesn't feel right that I am manually keeping track of the unique version names, and manually adding the suites to the appropriate TestVersion objects. Is this code even close to being correct? And what happens when I'm not building the entire database from scratch, as in this example. If the database already exists, do I have to query the database's TestVersion table to discover the unique version names? Thanks in advance. I know this is a lot of code to wade through, and I appreciate the help.

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